ID:

dvi_19238

 Coordinate:

scaffold_13049:9776794-9776944 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.1 -33.9 -33.9

Flybase annnotation

exon [dvir_GLEANR_13208:9]; CDS [Dvir\GJ13310-cds]; intron [Dvir\GJ13310-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATTCACCGGATGATACAACGCTCAGCGAAAGTGCCAATTCAATTTTTCAAGTAAGTGCTAGGTGTAAGCTTATATAATGCCCTTCAAATGGGAGTTAAGTCAATCCTCATGCAGGATAAGGATAGATTTATGCGCTATGACCTTGCTATGCAGAGGCAGGCTAGGTTTACTAACACAATTTTCTAAGATTTGATCCCCATTTCCAATTTTCCAACCATAAGTATATGTAAATTGTTAAGCACGTTTCTTAG
**************************************************..(((.((...(((((....)))))...)).)))..((((((.((((((((...((((.((((((.(((((((((.........))))..))))))).)))))))).....(((.....)))..............)))))))).))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060665
9_females_carcasses_total
 SRR060677
Argx9_ovaries_total
 V053
head
 M061
embryo
 SRR060657
140_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 GSM1528803
follicle cells		 SRR060669
160x9_females_carcasses_total
 SRR060658
140_ovaries_total
 SRR060687
9_0-2h_embryos_total
 M027
male body
...........GATACAACGCTCAGCGAAAGTGC......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ACCGGGTGATACAACGCTCAGCGG............................................................................................................................................................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GTAAATTGTTAAGCACGTTTC.... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................TTGATCCCCATTTCCAATTTTCCAACCA.................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................ACTTGCTATGCAGAGGCAGGCTAGGT..................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ACGCTCATCGAAAGTGCCAAT..................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGATTTATGCGCTATGACCTTGCTATG..................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................ACCTTGCTATGCAAAGGCAGG........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ACCGGGTGATACATCGCTCAGCGA............................................................................................................................................................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GAAAGTGCCAATTCAATTT.............................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATACAACGCTCAGCGAAAGT........................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........ATGATACAACGCTCAGCG................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......GGATGATACAACGCTCAGCGAAAGT........................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................ACGCTCAGCGAAAGTGCCAA...................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCCTCATGCAGGATAAGGATAGATTTAT........................................................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...CACCGGATGATACAACGCTCAGC................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......GGATGATACAACGCTCAGC................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................CAGCGAAAGTGCCAATTCAATTTTTCAA......................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...CACCGGATGATACAACGCTCAGCGAAA............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATACAACGCTCAGCGAAAGTGCCA....................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GATACAACGCTCAGCGAAAGT........................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AGGTTTACTAAGACAAGT....................................................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................AGTGCTAAGTGTATGCTT.................................................................................................................................................................................... 18 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GCCCGTGCTATCCAGAGGC.............................................................................................. 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................TTTAAATTGTTAAGCACGC....... 19 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................GTTGAAGCTTATATAATG............................................................................................................................................................................ 18 2 17 0.12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0
.TACAACGGATGGTACAACG....................................................................................................................................................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................TTTATCCGCGATGATCTTG.......................................................................................................... 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........TGGTACAAGGCTCAGTGAA.............................................................................................................................................................................................................................. 19 3 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAAGTGGCCTACTATGTTGCGAGTCGCTTTCACGGTTAAGTTAAAAAGTTCATTCACGATCCACATTCGAATATATTACGGGAAGTTTACCCTCAATTCAGTTAGGAGTACGTCCTATTCCTATCTAAATACGCGATACTGGAACGATACGTCTCCGTCCGATCCAAATGATTGTGTTAAAAGATTCTAAACTAGGGGTAAAGGTTAAAAGGTTGGTATTCATATACATTTAACAATTCGTGCAAAGAATC
**************************************************..(((.((...(((((....)))))...)).)))..((((((.((((((((...((((.((((((.(((((((((.........))))..))))))).)))))))).....(((.....)))..............)))))))).))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 V116
male body		 SRR060683
160_testes_total
 SRR060658
140_ovaries_total
 SRR060677
Argx9_ovaries_total
 V053
head
 M027
male body		 SRR060662
9x160_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
.............................................................................................................................................................................................................GAAAAGGTTGGTATTCACA........................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...GTGGCCTACTATGTTGCGAGT................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............ATGTTGGGAGTCGCTCTC............................................................................................................................................................................................................................ 18 2 3 0.33 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................TACTAAACTAGTGGTAAAG................................................ 19 2 6 0.17 1 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................CGGGAAAAGGTTGGTATTCA............................. 20 3 6 0.17 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................CGAGATACTGGAACCCTAC..................................................................................................... 19 3 15 0.13 2 0 0 0 0 0 0 1 1 0
.....................................................................................................CTAGGAGTAGGTCCTATTG................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 1 0 0 0
.................................GGGTGAGTTAAAAAGTTC........................................................................................................................................................................................................ 18 2 15 0.07 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:9776744-9776994 + dvi_19238 ATTCACCGGATGATACAACGCTCAGCGAAAGTGCCAATTCAATTTTTCAAGTAAGTGCTAGGT-------GTAAGCTTATATAA-----------------------T------GCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAATGGGAGTTA---------------------------AGTCAATCCTCATGC-------------AGGATAAGGA-TAGATTTATGCGCTATGACCTTGCTATGCAGAGGCAGGCTAGGT-----TTA-CTAA---------------------------------------------------------------------------------------CACAATTTTCTAAGATTTGA----------TCCCCAT---TTCCAATTTTCCAACCATAAG-TATATGTAAATTGTTAAGCACGTTTCTTAG
droMoj3 scaffold_6680:10996409-10996656 - ACTCACCGGATGATACAACGCTCAGCGAAAGTGTCAATTTAATTTTTCAAGTAAGTGTTAATCGAGCCTCGAAATCTTACCTAACACTTTATGTGG-GTTTCAGATTA--------------------------------TGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTAGGAGTTTAATTATAGAGTTGAAAGTAGTTATATAGA---AAGCTACGT-----AAATCTCTTGCGACATTCGAAGATAAGCGTGTTTTATACCA----------------------------------------------------------------------------------------------------TATTCAGAAAACTTA-TAGAAAACAAAAGCTAATTACGTTTCTCGG
droGri2 scaffold_15110:20346312-20346428 + ATTCACCGGACGATACAACCCTCAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGTGTTTG-C-------GTCAATTTGCACTA-----------------------CTTATTAATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAATCGGGGCTA---------------------------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTCTGC---------------------------------------------------------AGG-------------------------------
droWil2 scf2_1100000004511:9383409-9383546 + ACTCACCAGACGATACAACGCTCAGCGAAAGTGCCAATTTAATCTTTCAAGTGAGT--TAA-----------------------G-------------------ATTA--------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------GGAATTCCATTTCAGATC-------TAGGCAT-------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTCA----------CATTTAA---TATTTATTTTTGG-------GGGATAGGAGGATTGTT---------------
dp5 XR_group8:3579655-3579898 + ATTCACCGGATGATACAACGCTGAGCGAAAGTGCCAATTTAATTTTCCAAGTAAGT--AGA-----------------------TTGAGA-TTTGA-GA-------------------TCAGAGGATCGTGTAGCTTCCAGTG---------------------------------GTAGATAGGGAGTGATGGGA--------GGTCCTTT---T------AT-------------GCCTTA-------------------------------------------------------------------------------------------------------------A---ATAATGATC-------AAAATCAATCAACAAGTGATTGATATCTAG--------------------------------------------------------------------------------------------------------------------CAGAGGTTGCAAATGATTCAAGCTTTCCC----------------------TCTAATTTGAATTTCCATTAA-------TATTA------------------------------TT--TGACGTTTTGCTT
droPer2 scaffold_65:382016-382071 + ATTCACCGGATGATACAACGCTGAGCGAAAGTGCCAATTTAATTTTCCAAGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:12741335-12741390 + ACTCCCCGGACGATACAACGCTGAGCGAAAGTGCCAATCTTATTTTCCAAGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396589:1281253-1281308 - ACTCGCCGGACGATACAACGCTGAGCGAAAGTGCCAATCTTATTTTCCAAGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302711:248182-248237 + ATTCACCGGATGATACAACGCTGAGCGAAAGTGCCAATTTAATTTTCCAAGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453929:1816697-1816919 + ATTCACCTGATGATACGACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGTGCAGA-----------------------CATGATAATAAG-GGGTTGGCAAA--------------------------------AAA--------------------------------------------------AGAAA--ATTGGCTCTC---TAGTATGTGATCT--TGTAGTTTATAATTAAACCAATTCCGTTTGGTGAAAAGGAAT----------------------------------------------------------------------------------AGCTTTAATAGGTAAATTTTTTCCTGTT-----------------------------------------------------------------------------------------------------------------------------------------TTCGGA-----------------------------------ATAGAA------AAA-TTT------TTTTTAATATC---GCTTTGTT-------------------------------------------T
droEle1 scf7180000491268:1298391-1298597 - ACTCACCTGATGATACGACGTTGAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------GACAATGACAAGGGG-GA---A---------------------------------------------------------------------------------ATAATAAAAAAATA--AGATCTTTT---CTATCTAAT-------------TACTTAAACGA------------------TAAT--------------------------ACGTTTTAAATG----------TGTTAAGACACATTTTCAAAGTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCCTTTAATTCAGTAAAGAAATCTAGAAA-TTA----------TGTTTAC---TATTG-----------------------------------------------
droRho1 scf7180000768851:89169-89402 - ATTCCCCTGATGATACGACGCTGAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------TAAAATAAAATGGGA-AAAAT-------------TCAGAGAAT-------------------------------------------------------------------------AGTAACT--TTTATAAGATATGTTCTAATGTAATATGTAATTAGTTCAAATT-------------------------------------------------------------------------------------------------------TATAATAGGGAAAATATTTCCTAGT-----------------------------------------------------------------------------------------------------------------------------------------TTCAAAACAACAAAAGAGATATGTTTTCCC-TTAGTTCAGCAAAGAAATCTAGAAT-TTT----------CGTTTAC---TATTA----------------------------------------------T
droBia1 scf7180000302193:3302183-3302405 - ATTCACCGGATGATACGACGCTCAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------GCAAATTATGAG-GGTATT----T--------------------------------TGAATGGGAAAATAATAGTTTAACTAATCAAGATCATTTAGACAG---------------------------------------------------------------------------------GAAGAACTATATTCATGATCTCTAAACCAGGCATTGTAAAGGCCTTTGTTACTGTTAAAGAACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTA----------CACTTCT---GCTTCGTTTTTAATCAATAAGG-----------------------------G
droTak1 scf7180000415868:505021-505076 - ATTCACCGGATGATACGACGCTTAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409466:3568285-3568456 - ATTCACCCGATGATACGACGCTGAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------GCAAATATCGCGGGG-AA---AAA--------------------------------GGA---------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAGGGTGTCCCATAGAATTATCATTAGTTTC---------------------------------------AAGAAGAAATCCAGGTT-GTT----------TGTTCACTTCTAATCATATTTAATTTGTATGGGA---------------------------T
dm3 chr3L:5798821-5798977 - ATTCACCTGATGATACAACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------CAAATTAGTTGG-GGTAAAGAAAA--------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------TAAGCCAGGGCTAAAATA-TCAA---------------------------------------------------------------------------------------GATAGAAGTCGAAGATATTA----------TATTTTC---TATTAATTTTTAATCTTTAAG-------------------------------
droSim2 3l:5711836-5712036 - ATTCACCTGATGATACGACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------CAAATAAATTGG-GGTATAGAAAA--------------------------------GGA---------------------------------TTTGGAAGG---------------------------------------------------------------------------------GACT-----------------------------------------T----------------------------------GTGTCCAACCATAGTGTATAAATTTTAAATTGTATTAG---------------------------------------------------------------TAAGCCAGGGCTAAAATA-TTAA---------------------------------------------------------------------------------------GAAAGCACTCCAAGATTTTA----------TATTTTC---TATTAATTTTTAATC-------------------------------------
droSec2 scaffold_2:5735618-5735811 - ATTCACCTGATGATACGACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------CAAATTAATTGG-GGTATTGAAAA--------------------------------GGA---------------------------------TTTAAAAGG---------------------------------------------------------------------------------GACC----------------------------------------------------------------------------------AACTATAGTGTATAAATTTTAAATTGTATTAG---------------------------------------------------------------TAAGCCAGGGCTAAAATA-TTAA---------------------------------------------------------------------------------------GAAAGCACTCCAAATTTTTA----------TATTTTC---TATTAATTTTTAATC-------------------------------------
droYak3 3L:6369760-6369963 - ACTCACCTGATGATACGACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--ATG-----------------------AAATATATTTGG-GGCATA-AAAA--------------------------------GTA---------------------------------TTTGAAAGG---------------------------------------------------------------------------------GAGT-----------------------------------------A----------------------------------ATGTCCA---ATAGTGAACCAAGTTTAAAATTTATTAG---------------------------------------------------------------CAAAGCAGTTTCAGAAGA-TTAA---------------------------------------------------------------------------------------GAAAGCAGTCCGGGTTTT-T--------TTTATTTTC---TATTTGTTTTTAATCTCTAAG-------------------------------
droEre2 scaffold_4784:8491283-8491338 - ACTCACCTGATGATACGACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATTCACCGGATGATACAACGCTCAGCGAAAGTGCCAATTCAATTTTTCAAGTAAGTGCTAGGT-------GTAAGCTTATATAA-----------------------T------GCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAATGGGAGTTA---------------------------AGTCAATCCTCATGC-------------AGGATAAGGA-TAGATTTATGCGCTATGACCTTGCTATGCAGAGGCAGGCTAGGT-----TTA-CTAA---------------------------------------------------------------------------------------CACAATTTTCTAAGATTTGA----------TCCCCAT---TTCCAATTTTCCAACCATAAG-TATATGTAAATTGTTAAGCACGTTTCTTAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........GATACAACGCTCAGCGAAAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATTGTTAAGCACGTTTC....2111.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGA----------TCCCCAT---TTCCAATTTTCCAACCA...................................2811.001000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGATTTATGCGCTATGACCTTGCTATG................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..........................GAAAGTGCCAATTCAATTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............ATACAACGCTCAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
.........ATGATACAACGCTCAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
.......GGATGATACAACGCTCAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
.................ACGCTCAGCGAAAGTGCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TCCTCATGC-------------AGGATAAGGA-TAGATTTAT...................................................................................................................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
...CACCGGATGATACAACGCTCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
.......GGATGATACAACGCTCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
......................CAGCGAAAGTGCCAATTCAATTTTTCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
...CACCGGATGATACAACGCTCAGCGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
............ATACAACGCTCAGCGAAAGTGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........GATACAACGCTCAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
ACTCACCGGATGATACAACGCTCAGCGAAAGTGTCAATTTAATTTTTCAAGTAAGTGTTAATCGAGCCTCGAAATCTTACCTAACACTTTATGTGG-GTTTCAGATTA--------------------------------TGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATTAGGAGTTTAATTATAGAGTTGAAAGTAGTTATATAGA---AAGCTACGT-----AAATCTCTTGCGACATTCGAAGATAAGCGTGTTTTATACCA----------------------------------------------------------------------------------------------------TATTCAGAAAACTTA-TAGAAAACAAAAGCTAATTACGTTTCTCGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........GATACAACGCTCAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
............ATACAACGCTCAGCGAAAGTGTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...CACCGGATGATACAACGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........GATACAACGCTCAGCGAAAGTGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTATAGAGTTGAAAGT.......................................................................................................................................................................................................................2011.001000100
...........GATACAACGCTCAGCGAAAGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
droGri2
ATTCACCGGACGATACAACCCTCAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGTGTTTG-C-------GTCAATTTGCACTA-----------------------CTTATTAATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAATCGGGGCTA---------------------------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTCTGC---------------------------------------------------------AGG-------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ACTCACCAGACGATACAACGCTCAGCGAAAGTGCCAATTTAATCTTTCAAGTGAGT--TAA-----------------------G-------------------ATTA--------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------GGAATTCCATTTCAGATC-------TAGGCAT-------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTCA----------CATTTAA---TATTTATTTTTGG-------GGGATAGGAGGATTGTT---------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........GATACAACGCTCAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........GATACAACGCTCAGCGAAAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
........GACGATACAACGCTCAGCGAAAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...CACCAGACGATACAACGCTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.......AGACGATACAACGCTCAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
dp5
ATTCACCGGATGATACAACGCTGAGCGAAAGTGCCAATTTAATTTTCCAAGTAAGT--AGA-----------------------TTGAGA-TTTGA-GA-------------------TCAGAGGATCGTGTAGCTTCCAGTG---------------------------------GTAGATAGGGAGTGATGGGA--------GGTCCTTT---T------AT-------------GCCTTA-------------------------------------------------------------------------------------------------------------A---ATAATGATC-------AAAATCAATCAACAAGTGATTGATATCTAG--------------------------------------------------------------------------------------------------------------------CAGAGGTTGCAAATGATTCAAGCTTTCCC----------------------TCTAATTTGAATTTCCATTAA-------TATTA------------------------------TT--TGACGTTTTGCTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...CACCGGATGATACAACGCTGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0021100000000
.......GGATGATACAACGCTGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............ACAACGCTGAGCGAAAGTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......GGATGATACAACGCTGAGCGAAAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010000
....ACCGGATGATACAACGCTGAGCGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..................CGCTGAGCGAAAGTGCCAATTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......CGGATGATACAACGCTGAGCGAAAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
droPer2
ATTCACCGGATGATACAACGCTGAGCGAAAGTGCCAATTTAATTTTCCAAGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...CACCGGATGATACAACGCTGAGCGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........GATACAACGCTGAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
...CACCGGATGATACAACGCTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............ATACAACGCTGAGCGAAAGTGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...CACCGGATGATACAACGCTGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...CACCGGATGATACAACGCTGAGCGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droAna3
ACTCCCCGGACGATACAACGCTGAGCGAAAGTGCCAATCTTATTTTCCAAGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......GGACGATACAACGCTGAGCGAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...............CAACGCTGAGCGAAAGTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.......GGACGATACAACGCTGAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
ACTCGCCGGACGATACAACGCTGAGCGAAAGTGCCAATCTTATTTTCCAAGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ATTCACCGGATGATACAACGCTGAGCGAAAGTGCCAATTTAATTTTCCAAGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATTCACCTGATGATACGACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGTGCAGA-----------------------CATGATAATAAG-GGGTTGGCAAA--------------------------------AAA--------------------------------------------------AGAAA--ATTGGCTCTC---TAGTATGTGATCT--TGTAGTTTATAATTAAACCAATTCCGTTTGGTGAAAAGGAAT----------------------------------------------------------------------------------AGCTTTAATAGGTAAATTTTTTCCTGTT-----------------------------------------------------------------------------------------------------------------------------------------TTCGGA-----------------------------------ATAGAA------AAA-TTT------TTTTTAATATC---GCTTTGTT-------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droEle1
ACTCACCTGATGATACGACGTTGAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------GACAATGACAAGGGG-GA---A---------------------------------------------------------------------------------ATAATAAAAAAATA--AGATCTTTT---CTATCTAAT-------------TACTTAAACGA------------------TAAT--------------------------ACGTTTTAAATG----------TGTTAAGACACATTTTCAAAGTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCCTTTAATTCAGTAAAGAAATCTAGAAA-TTA----------TGTTTAC---TATTG-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATTCCCCTGATGATACGACGCTGAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------TAAAATAAAATGGGA-AAAAT-------------TCAGAGAAT-------------------------------------------------------------------------AGTAACT--TTTATAAGATATGTTCTAATGTAATATGTAATTAGTTCAAATT-------------------------------------------------------------------------------------------------------TATAATAGGGAAAATATTTCCTAGT-----------------------------------------------------------------------------------------------------------------------------------------TTCAAAACAACAAAAGAGATATGTTTTCCC-TTAGTTCAGCAAAGAAATCTAGAAT-TTT----------CGTTTAC---TATTA----------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droBia1
ATTCACCGGATGATACGACGCTCAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------GCAAATTATGAG-GGTATT----T--------------------------------TGAATGGGAAAATAATAGTTTAACTAATCAAGATCATTTAGACAG---------------------------------------------------------------------------------GAAGAACTATATTCATGATCTCTAAACCAGGCATTGTAAAGGCCTTTGTTACTGTTAAAGAACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTA----------CACTTCT---GCTTCGTTTTTAATCAATAAGG-----------------------------GSizeHit CountTotal NormTotal
No Reads
droTak1
ATTCACCGGATGATACGACGCTTAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
ATTCACCCGATGATACGACGCTGAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------GCAAATATCGCGGGG-AA---AAA--------------------------------GGA---------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAGGGTGTCCCATAGAATTATCATTAGTTTC---------------------------------------AAGAAGAAATCCAGGTT-GTT----------TGTTCACTTCTAATCATATTTAATTTGTATGGGA---------------------------TSizeHit CountTotal NormTotal
No Reads
dm3
ATTCACCTGATGATACAACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------CAAATTAGTTGG-GGTAAAGAAAA--------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------TAAGCCAGGGCTAAAATA-TCAA---------------------------------------------------------------------------------------GATAGAAGTCGAAGATATTA----------TATTTTC---TATTAATTTTTAATCTTTAAG-------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................TGCCAATTTAATTTTCCAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2218.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCACCTGATGATACAACGCTAAGCGAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CTGATGATACAACGCTAAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.......................................................................................................GAAAA--------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------TAAGCCAGGGC...............................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010
................AACGCTAAGCGAAAGTGCCAATTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGCTAAGCGAAAGTGCCAATTTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAGCGAAAGTGCCAATTTAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCGAAAGTGCCAATTTAATTTTCCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGATGATACAACGCTAAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGCTAAAATA-TCAA---------------------------------------------------------------------------------------GA..........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TGG-GGTAAAGAAAA--------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------TAAGCC....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....CCTGATGATACAACGCTAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................AAAA--------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------TAAGCCAGGG................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................GTGCCAATTTAATTTTCCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GCTAAGCGAAAGTGCCAATTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TAAGCGAAAGTGCCAATTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GATGATACAACGCTAAGCGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACGCTAAGCGAAAGTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGATGATACAACGCTAAGCGAAAGTGCCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGATACAACGCTAAGCGAAAGTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
ATTCACCTGATGATACAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGATACAACGCTAAGCGAAAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................ACGCTAAGCGAAAGTGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GATGATACAACGCTAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...CACCTGATGATACAACGCTAAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AACGCTAAGCGAAAGTGCCAATTTAATTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TAAAGAAAA--------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------TAAGCCAGGGC...............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........ATGATACAACGCTAAGCGAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......TGATGATACAACGCTAAGCGAAAGTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................CAAATTAGTTGG-GGTAAAGAAAA--------------------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..TCACCTGATGATACAACGCTAAGCGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATTCACCTGATGATACAACGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CACCTGATGATACAACGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................AGTGCCAATTTAATTTTCCAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGCTAAGCGAAAGTGCCAATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AATTAGTTGG-GGTAAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
droSim2
ATTCACCTGATGATACGACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------CAAATAAATTGG-GGTATAGAAAA--------------------------------GGA---------------------------------TTTGGAAGG---------------------------------------------------------------------------------GACT-----------------------------------------T----------------------------------GTGTCCAACCATAGTGTATAAATTTTAAATTGTATTAG---------------------------------------------------------------TAAGCCAGGGCTAAAATA-TTAA---------------------------------------------------------------------------------------GAAAGCACTCCAAGATTTTA----------TATTTTC---TATTAATTTTTAATC-------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
ATTCACCTGATGATACGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...........GATACGACGCTAAGCGAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
...........GATACGACGCTAAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
droSec2
ATTCACCTGATGATACGACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--AGA-----------------------CAAATTAATTGG-GGTATTGAAAA--------------------------------GGA---------------------------------TTTAAAAGG---------------------------------------------------------------------------------GACC----------------------------------------------------------------------------------AACTATAGTGTATAAATTTTAAATTGTATTAG---------------------------------------------------------------TAAGCCAGGGCTAAAATA-TTAA---------------------------------------------------------------------------------------GAAAGCACTCCAAATTTTTA----------TATTTTC---TATTAATTTTTAATC-------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............ATACGACGCTAAGCGAAAGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
............................................................A-----------------------CAAATTAATTGG-GGTATTGAAAA--------------------------------GGA---------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
...CACCTGATGATACGACGCTAAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...............CGACGCTAAGCGAAAGTGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
........GATGATACGACGCTAAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...........GATACGACGCTAAGCGAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
droYak3
ACTCACCTGATGATACGACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT--ATG-----------------------AAATATATTTGG-GGCATA-AAAA--------------------------------GTA---------------------------------TTTGAAAGG---------------------------------------------------------------------------------GAGT-----------------------------------------A----------------------------------ATGTCCA---ATAGTGAACCAAGTTTAAAATTTATTAG---------------------------------------------------------------CAAAGCAGTTTCAGAAGA-TTAA---------------------------------------------------------------------------------------GAAAGCAGTCCGGGTTTT-T--------TTTATTTTC---TATTTGTTTTTAATCTCTAAG-------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................GAAAGTGCCAATTTAATTTTCCAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001
................GACGCTAAGCGAAAGTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
.......TGATGATACGACGCTAAGCGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEre2
ACTCACCTGATGATACGACGCTAAGCGAAAGTGCCAATTTAATTTTCCAAGTGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........GATACGACGCTAAGCGAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021000100
........GATGATACGACGCTAAGCGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
........GATGATACGACGCTAAGCGAAAGTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
...CACCTGATGATACGACGCTAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000

Generated: 05/16/2015 at 10:06 PM