ID:

dvi_19216

 Coordinate:

scaffold_13049:9629468-9629605 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.7 -19.34 -19.1

Flybase annnotation

exon [dvir_GLEANR_12068:6]; CDS [Dvir\GJ12072-cds]; CDS [Dvir\GJ12072-cds]; exon [dvir_GLEANR_12068:7]; intron [Dvir\GJ12072-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCGATGAGAAAAAGGATTGTGGCGTCAAGAGCGATGGCCAATCGAGTCGCGTACGTTTGCTTAGCTTGAGATGCCTGTGATTTTATGTTTCAATTCAATATTTCGTTTTGCCTCCTCACAGGAATTTGGTCCCGAACAGTTGCAGATGCAAGCCCAGAAAATGGAAGCTCAGTTGACTTTTACAACATTTACAATACGCTACGTTAGCTTTATTATTACTGCTCTTTATTGGTTTCGG
**************************************************...(((((.((..(((((......(((((((....(((((....((((.(((((................)))))))))....))))))))))))...)))))..)).)))))......********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060679
140x9_testes_total
 SRR060659
Argentina_testes_total
 SRR060660
Argentina_ovaries_total
 M047
female body
 V116
male body		 SRR060678
9x140_testes_total
 SRR060681
Argx9_testes_total
 M027
male body		 M061
embryo
 SRR060655
9x160_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060670
9_testes_total
 SRR060673
9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060689
160x9_testes_total
 V047
embryo
 SRR060685
9xArg_0-2h_embryos_total
 GSM1528803
follicle cells		 SRR060666
160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
.......................................................................................................................................................GCCCAGAAAATGGAAGCT..................................................................... 18 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GAACAGTTGCAGATGCAAGCCC................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GATGAGAAAAAGGATTGTGGC....................................................................................................................................................................................................................... 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GATGAGAAAAAGGATTGTGGGGT..................................................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CGAACAGTTGCAGATGCAAGCC.................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................GCAATACGCTACGTTAGCTTTATT........................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GATGAGAAAAAGGATTGTGGCGT..................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AACATTTACAATACGCTACGTT................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GATTGTGGCGTCAAGAGC.............................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TGTGGCGTCAAGAGCGATGGC........................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TTACAATACGCTACGTTAGCTTT........................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGAAAAAGGATTGTGGCG...................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TGTGGCGTCAAGAGCGATGGCCAAT.................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................GTCAAGAGCGATGGCCAATCGA................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................TGGCCAATCGAGTCGCGAA......................................................................................................................................................................................... 19 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................CGTCAAGAGCGATGGCCAATCGAGTC.............................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................AGAGCGATGGCCAATCGAGTCGC............................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GATGAGAAAAAGGATTGTGGCGTCAA.................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTACGTTTGCTTAGCTTGAGATGCCT.................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......GAAAAAGGATTGTGGCGTCAAGAGCG............................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGAAAAAGGATTGTGGCGTCAAG................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AAAAGGATTGTGGCGCCA................................................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................CAAGAGCGATGGCCAATCGAGT............................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................CCCAGAAAATGGAAGCTCAATT................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGCAGATGCAAGCCCAGAAAATGGAA........................................................................ 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CGCGAATTTGGTCCCGAACA.................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTACGTTTGCTTAGCTTGAGATGCC................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................GCTTAGCTTGAGATGCCTGT................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.CGATGAGAAAAAGGATTGTGGCGT..................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.CGATGAGAAAAAGGATTGTGGC....................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTACGTTTGCTTAGCTTGAGATGCCTG................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TCGATGAGAAAAAGGATTGTG......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.CGATGAGGGGAAGGATTGTGG........................................................................................................................................................................................................................ 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GCCCAGAAAATGGAAGCC..................................................................... 18 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TTAAACTACGATACGTTAGCT............................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................AAATTTGGTCCCGAA...................................................................................................... 15 1 12 0.25 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0
.........AAAAGGACTTTGGTGTCAAGA................................................................................................................................................................................................................ 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................CTAGCCCTGAAAATGGAA........................................................................ 18 2 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1

Anti-sense strand reads

AGCTACTCTTTTTCCTAACACCGCAGTTCTCGCTACCGGTTAGCTCAGCGCATGCAAACGAATCGAACTCTACGGACACTAAAATACAAAGTTAAGTTATAAAGCAAAACGGAGGAGTGTCCTTAAACCAGGGCTTGTCAACGTCTACGTTCGGGTCTTTTACCTTCGAGTCAACTGAAAATGTTGTAAATGTTATGCGATGCAATCGAAATAATAATGACGAGAAATAACCAAAGCC
*********************************************************************...(((((.((..(((((......(((((((....(((((....((((.(((((................)))))))))....))))))))))))...)))))..)).)))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060666
160_males_carcasses_total
 M028
head
 SRR060660
Argentina_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060679
140x9_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 V053
head
.......................................................................................................................................................CGGGTCTTTTACCTTCGAGTT.................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................CCGGTTAGCTCAGCGCATGCA...................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................TGTCAACGTCTACGTTCGGGT.................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................................AGCGGAGGAGAGTCCTTAAA............................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................GCAAGACGGAGGAGTGTCCTT.................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................GTTCGCGCTACCGGTTAACAC................................................................................................................................................................................................ 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0
........................GGTTCGCGCTACCGGTTA.................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................ACCCTCGAGCCAATTGAAAA......................................................... 20 3 8 0.13 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................TAATAATGACGAGGAAGA......... 18 2 17 0.06 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................TGAACCCGGGCATGTCAA................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0
..............................................................GCCAACTCTACGGACCCT.............................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:9629418-9629655 - dvi_19216 TCGATGAGAAAAAGGATTGTG------------GC-----------------------GT-CAAGAGCGATGGCCAATCG--------AGTCGCGTACG-TTTGCTTAGCTTG-----AGATG------------------------------------------CCTGTGATTTTATGTTT--CA------------A--------------------------------------------TTCA-------------------------AT--ATTTC----GTTT---T---GC---------CTCCTC-ACAGGAATTTGGTCCCGAACAGTTGCAGATGCAAGCCC---AGAAAATGGAA-----GCTCA--GTTGACTTTTAC--AACATTTACAATACGCTACGTTAGCTTTATTATTACTGCTCTTTATTGGTTTCGG
droMoj3 scaffold_6680:11134934-11135202 + TGGACGAGAAATCCGAATGTGCAAAAACCACAAAC-----------------------AT-GAAGAGC----------------------GATAGCAGTAGTAGTGTATGTTCA---TATATA------------------------------------------TAT------------TT--TGTATTA-------TTTT---TGAGG--------------------------TT-TTTATACC-----TTTTATTATTCTACATAC--ATATA--TC----GCTTTTCT---GG---------TTTATT-ACAGGAATTTGGTGCAGACAAATTTCAGGAGCAAGCCC---AAAAAATGGAA-----GCTCA--ATTGAATTTTACAAAACATTTACAATATGCCACATTGGCTCTATTGTTGTTGCTATTTATTGGGTTCGG
droGri2 scaffold_15110:17404103-17404331 - TGGATGAAAAGAAAAAGG-----------------GCG------------------------------ACGATCAGTTAGGACGAGCGAGCG----AAAAGGTGTGTGAATGAA---ATGAAA----------------------------CCAA----------TCC---------------------ATAC--TGAT---GATAATTTC------A---TTTCCTTTCCTT-----------------------------------------------------------T---GT---------TTTTTA-TTAGGAACAGGGCC---------T---TAAGGAACGTGCCGATCAAATTGAA-----GCTAA--GCTAAACTTCACCACAAATTTACAATACGCAACATTAGCATTATTAGTGCTACTGTTTGCCGGCTTCTG
droWil2 scf2_1100000004511:9218743-9219001 - TTCATGGTGCTGGT--------------------------------------------GT-CAAAAGTTGTGGCGGTGCAATTAGCGA-------------------------------TGATGGTGGTAATTCATTTGTGAATAAAGTTGATGACGGCAAAAATGCAGCAGCTGTAAGTCCATCCGAC------ATCA------------------CATA------------CTC----------------TTCCCTTAATCCACTTATCCTTA----TC----CATTTCGT---TG---------TCTACTTACAGCTGAA------------------GCTGCAGGCCC---ACAT-------------------GACCTCCCGTACCCTAAAATTACAATATGTGATTGTGGCATTACTTGTGCTGCTGTGTGCTCTCCTCAG
dp5 XR_group8:3443769-3444005 - TTGAGAAT----------------------------------------------------------TCATCATCCAAATGCGCAGGCAAGGCGAGCACAGCAACTTTGGACTGT---GCAAAGGGTGGAAAACCGGACGTAAGAAACACAGCTAA-------------------------------TGGCCAG--TTAA---GATTGTGTG------G---TAACCCGTTTAC---------------------------------------------------------------------------TTATT-GCAGTTACA------------------GGACCAGGTCA---AGGCACTGTCTCGGCGCGTTAAGGTTGGAA-------ATTTCGTCCAGTATTTAACGTTGCTTCTGGTACTGTTGCTGTACGCTGCTGTCGG
droPer2 scaffold_65:248152-248388 - TTGAGAAT----------------------------------------------------------TCAGCATCCAAATGCGCAGGCAAGGCGAGCACAGCAACTTTGGACTGT---GCAAAGGGTGGAAAACCGGACGTAAGAAACACAGTTAA-------------------------------TGGCCAG--TTAA---GATTGTGTG------G---TAACCCGTTTAC---------------------------------------------------------------------------TTATT-GCAGTTACA------------------GGACCAGGTCA---AGGCACTGTCTCGGCGCGTTAAGGTTGGAA-------ATTTCGTCCAGTATTTAACGTTGCTTCTGGTACTGTTGCTGTACGCTGCTGTCGG
droAna3 scaffold_13337:12574151-12574428 - TCGATGATAAGAGCGGATCGG--------------GAGGCGGTGGTGGCAGTAGCGTG-C-ACGGAACGAAGTCTGATTGCGCCAGCAAAGCCAGCAAAACTAGTGTAGATTGC---AAGAAA------------------------------------------TCCGGCTTGGTAGGCATTTATT---------T---------AAAT--------------------------AT-TTCATTACATACA--------------------TTTGA--TTTTGA-------TTTTTT---------CTTTTC-TGAAGAAAT--------------CCCGAGATCCAGCTG---AGGCAATGGCA-----CGACA--GCTGGCATTTACCCAGAACCTACAGTATGTGACGCTGGCCCTACTCCTACTGCTCTTTGCCGGATTTGG
droBip1 scf7180000396589:1414589-1414861 + TCGATGGAAAGGGCGCTG-----------------------GTGGAGGCAGTGGGTTG-C-AGGTGGCGAAGTCTGATTGCGCCGGCAAAGCCAGCAAAACTAGTGTAGATTGC---AAGAAA------------------------------------------TCCGGTGCGGTGGGTATTCCTT---------TCA---AATTTTCTA------T---TAAATCGTTTTAT------------------------------------GATTACA--TTATTT-------TCTTTT---------TCTCAA-AAAGTCAAG------------------CGATCCGGCTG---AGGTAATGGCA-----CGACA--GCTGGCATTTACCCAGAACCTACAGTATGTGACGCTGGCCCTACTCGTACTGCTCTTTGCCGGCTTTGG
droKik1 scf7180000302711:98857-99110 - TGGATGAAAAGAAA---------------------------------------------GACAAA-AATGCAGCGGATTGTCAAAGCAAGGCCAGCAAGCCGAGTGTAGACGAC---AAGAGG------------------------------------------TCAAGTACGGTGAGTATCTCGAAGG--GAAATGAGCA---TAATA--------------------------CAA-----TAAATAAT--------------------AATAA--CTATAAACAA---T---AC---------TATTTA-ACAGGGACT------------------CGATTCGTCCG---ATGTGATAGCC-----CGGCA--GCTGGCCTTTACACAGAACCTGCAGTATGTAACTTTGGCGCTGATGGTGCTGCTCTTCGCTGGCTTCGG
droFic1 scf7180000453929:1683819-1684055 - TTGAAGAAAGCAAA---------------------------------------------T-GCAAATCGGAACCCGATTGTGGGAACAAAGCTAGTAAAGCCAGTGTAAACTGC---AAGAAG------------------------------------------TCGGCTACTGTGAGTTT--T------------AA-GT---CAGAA--------------------------ATATTTAAAG---------------------------CACA--TGTTAA-------C-ATTT---------CTTTTT-AAAGGCACA------------------AGACCCAGTAT---CGATGATGGAA-----CGCCA--GTTGGCGTTCACCCAGAACCTGCAATACGTTACGCTGGCGCTGCTTTTGCTGCTGTTCGCGGGATTCGG
droEle1 scf7180000491193:713061-713308 + TCGATGCT---------------------------------------------------C-CGAAAGCGCCACCGGATTGTCCGAACAAGGCCAGCAAGGCCAGTGTAGATGGC---AAGAAA------------------------------------------TCCTCGATTGTAAGTGG--CCAAATG-GCCTTGA---AATTCTGTAAATTTATATA------------T------------------------------------TAATA-------------------TATTGAAATTCTATGGAAA-ACAGGGGAA------------------CGATCCGGCCT---CGGTGATGGAG-----CGCCA--GTTGGCATTTACCCAGAACCTGCAATATGTGACGCTGGCGCTGCTTATGCTGCTCTTTGCCGGCTTCGG
droRho1 scf7180000779474:130267-130510 + TTGAAGAAAACAAG---------------------------------------------C-CGAAAGCACCTCCGGATTGTCCAAACAAGGCCAGCAAGGCCAGTGTAGACGGC---AAAAAG------------------------------------------TGCTCCGGTGTAAGTGG--CAATATG-GCTATAAATT---TGAGA--------------------------AA-TTTATATA-------------------------AT--A-----------------TATTAAATTACCATGTACA-GCAGGGGCA------------------TGA------AT---CGTCGATAGAG-----CGACA--GTTGGCGTTTACCCAGAACCTGCAATATGTGACGCTGGCGCTGCTATTGCTGCTCTTCGCCGGCTTCGG
droBia1 scf7180000302193:3435642-3435885 + TCGATGAGAACAAA---------------------------------------------C-CCAAAGCGCAACCGGATTGCGCAGCCAAGGCCAGCAAGGCCAGTGTGGACTGC---AAGAAG------------------------------------------CCCGCTGTTGTGAGTTC--CCTTACCGCATTTAATGT---CTAGA--------------------------ATG----------------------------------TTGA--AAGTAA-------TGCATC---------CCACTT-GCAGGGACA------------------CGATCCGGCCT---CGGCGATGGAG-----CGCCA--GTTGGCGTTCACCCAGAATCTGCAATACGTGACGCTGGCGCTGCTATTGCTGCTGTTCGCGGGCTTCGG
droTak1 scf7180000415868:651026-651269 + TCGATGAGAACAAG---------------------------------------------G-CCAAGGCGCAACCGGATTGCGCAGCCAAGGCCAGCAAGGCCAGTGTGGACTGC---AAGAAG------------------------------------------TCGGCTGTTGTGAGTTT--CCTTACTGGCTATAAAAT---CCAGA--------------------------AAA----------------------------------TATA--TAGTAA-------TATCTT---------CTTCTA-TTAGGGACA------------------CGATCCGCAGT---CGGCGATGGAG-----CGCCA--GCTGGCCTTCACCCAGAACCTGCAATATGTGACGCTGGCGCTGCTATTGCTGCTCTTCGCGGGCTTCGG
droEug1 scf7180000409466:3693268-3693510 + TCGAAGAAAGTAAG---------------------------------------------C-CTAAAGCGCCACCGGATTGTCCATCGAAGACCAGCAAGTCTTGCGTGGACAGC---AAGAAG------------------------------------------TCGGCTATTGTAAGTTC--C-TTACTAACAACAAACC---GAAGA--------------------------AAA----------------------------------TAAA--TTTTAA-------TATATC---------TTCATA-CCAGGGTCA------------------TGATCCGGCAT---CGGCGATGGAA-----CGTCA--GTTGGCGTTTACCCAGAACCTGCAATACGTGACGCTGGCACTGTTATTGTTGCTCTTTGCCGGCTTCGG
dm3 chr3L:5922054-5922304 + TCGATGAGAACAAA---------------------------------------------T-CAAAAGCGCAGCTAGATTGCGCAAGCAAGTCCAGTAAGGCCAGCGTGGATTGCAGCAAGAAG------------------------------------------TCCGGTGCTGTAAGTATATCCTAGCCAT--GTAAAAG---CGAGTG------TGTA------------C--------------------------------------TTCTA--TTGTAA-------TAATTT---------CGTATA-ATAGGGCGT------------------AGATCCAGCTA---CGGCAATGGAG-----CGTCA--GTTGGCATTCACCCAGAACCTGCAATACGTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGG
droSim2 3l:5835361-5835611 + TCGATGAGAACAAG---------------------------------------------T-CAAAAGGGCAGCTAGATTGCGCAAGCAAGTCCAGTAAGGCCAGCGTGGATTGCAGCAAGAAG------------------------------------------TCCGGTGCTGTAAGTATATCCTAGCCAT--GTAAAAG---CGAGTG------CATA------------C--------------------------------------TTATA--TTGTAA-------TCATTT---------GGCATA-CTAGGGAGT------------------AGATCCAGCTA---CGGCAATGGAG-----CGCCA--GTTGGCATTCACCCAGAACCTGCAATATGTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGG
droSec2 scaffold_2:5857703-5857953 + TCGATGAGAACAAG---------------------------------------------T-CAAAAGCGCAGCTAGATTGCGCAAGCAAGTCCAGTAAGGCCAGCGTGGATTGCAGCAAGAAG------------------------------------------TCCGGTGCTGTAAGTATATCCTAGCCAT--GTAAAAG---CGAGTG------TATA------------C--------------------------------------TTATA--TTGCAA-------TCATTT---------GGCATA-ATAGGGAGT------------------AGATCCAGCTA---CGGCAATGGAG-----CGCCA--GTTGGCATTCACCCAGAACCTGCAATATGTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGG
droYak3 3L:6500626-6500874 + TCGAGGAGAGCAAG---------------------------------------------T-CCAAAGCGCCGCTAGATTGCGCAAACAAGGCCAGTAAGGCCAGCGTGGACTGCAACAAGAAA------------------------------------------TCCGGTGCTGTAAGTAT--CCTAACCCT--TTAAAAC---CGAAAA------TATA------------C--------------------------------------TCATA--GAGTTG-------TAATTT---------CGCATC-ACAGGACGT------------------TGATCCAGCTA---CGGCAATGGAG-----CGCCA--GTTGGCATTCACCCAGAACCTGCAATATGTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGG
droEre2 scaffold_4784:8619318-8619565 + TCGAGGAGAGCAAG---------------------------------------------T-CCAAAGCGCCGCTAGATTGCGCAAACAAGTCCAGTAAGGGCAGCATGGACTGTAGCAAGAAG------------------------------------------TCTGGTGCTGTAAGTAT--CCAAACCCC--GTAA-AT---CGAGAA------TACA------------T--------------------------------------TTATA--TACTAA-------TAATTT---------TGCATA-ACAGAACGT------------------TGATCCAGCTA---CGGCAATGGAG-----CGCCA--GTTGGCATTCACCCAGAACCTGCAATATGTTACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TCGATGAGAAAAAGGATTGTG------------GC-----------------------GT-CAAGAGCGATGGCCAATCG--------AGTCGCGTACG-TTTGCTTAGCTTG-----AGATG------------------------------------------CCTGTGATTTTATGTTT--CA------------A--------------------------------------------TTCA-------------------------AT--ATTTC----GTTT---T---GC---------CTCCTC-ACAGGAATTTGGTCCCGAACAGTTGCAGATGCAAGCCC---AGAAAATGGAA-----GCTCA--GTTGACTTTTAC--AACATTTACAATACGCTACGTTAGCTTTATTATTACTGCTCTTTATTGGTTTCGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................GCCC---AGAAAATGGAA-----GCT.........................................................................1813.003000000000030000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GAACAGTTGCAGATGCAAGCCC---............................................................................................2212.002000000000000000000000000000002000000000000000000000000000000000
..GATGAGAAAAAGGATTGTG------------GC-----------------------.....................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000100000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CGAACAGTTGCAGATGCAAGCC................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..GATGAGAAAAAGGATTGTG------------GC-----------------------GT-..................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................AACATTTACAATACGCTACGTT.................................2211.001001000000000000000000000000000000000000000000000000000000000000
..............GATTGTG------------GC-----------------------GT-CAAGAGC...........................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
.................TGTG------------GC-----------------------GT-CAAGAGCGATGGC.....................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................TTACAATACGCTACGTTAGCTTT...........................2311.001000100000000000000000000000000000000000000000000000000000000000
......AGAAAAAGGATTGTG------------GC-----------------------G....................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001000000000000000000000000000000000000000000000000000000000
.................TGTG------------GC-----------------------GT-CAAGAGCGATGGCCAAT.................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000001000000000000000000000000000000
..........................................................GT-CAAGAGCGATGGCCAATCG--------A......................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..................................C-----------------------GT-CAAGAGCGATGGCCAATCG--------AGTC...................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
...............................................................AGAGCGATGGCCAATCG--------AGTCGC.................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..GATGAGAAAAAGGATTGTG------------GC-----------------------GT-CAA...............................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................GTACG-TTTGCTTAGCTTG-----AGATG------------------------------------------CCT.......................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000010000000000000000000000000000000
.......GAAAAAGGATTGTG------------GC-----------------------GT-CAAGAGCG..........................................................................................................................................................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
......AGAAAAAGGATTGTG------------GC-----------------------GT-CAAG..............................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000100000000000000000000000000000000000000000000000000000
.............................................................CAAGAGCGATGGCCAATCG--------AGT....................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TTGCAGATGCAAGCCC---AGAAAATGGAA-----............................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................GTACG-TTTGCTTAGCTTG-----AGATG------------------------------------------CC........................................................................................................................................................................................................................................................................................2511.001000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................GCTTAGCTTG-----AGATG------------------------------------------CCTGT.....................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.CGATGAGAAAAAGGATTGTG------------GC-----------------------GT-..................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
.CGATGAGAAAAAGGATTGTG------------GC-----------------------.....................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000001000000000000000000000000000000000000000000000000000
..............................................................................................GTACG-TTTGCTTAGCTTG-----AGATG------------------------------------------CCTG......................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
TCGATGAGAAAAAGGATTGTG------------..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GCCC---AGAAAATGGAA-----GCC.........................................................................1820.501000000000010000000000000000000000000000000000000000000000000000
droMoj3
TGGACGAGAAATCCGAATGTGCAAAAACCACAAAC-----------------------AT-GAAGAGC----------------------GATAGCAGTAGTAGTGTATGTTCA---TATATA------------------------------------------TAT------------TT--TGTATTA-------TTTT---TGAGG--------------------------TT-TTTATACC-----TTTTATTATTCTACATAC--ATATA--TC----GCTTTTCT---GG---------TTTATT-ACAGGAATTTGGTGCAGACAAATTTCAGGAGCAAGCCC---AAAAAATGGAA-----GCTCA--ATTGAATTTTACAAAACATTTACAATATGCCACATTGGCTCTATTGTTGTTGCTATTTATTGGGTTCGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................AAAACCACAAAC-----------------------AT-GAAGAG............................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
................ATGTGCAAAAACCACAAAC-----------------------AT-GAAGAGC----------------------.....................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...............................AAAC-----------------------AT-GAAGAGC----------------------GATAGCAGT............................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
TGGATGAAAAGAAAAAGG-----------------GCG------------------------------ACGATCAGTTAGGACGAGCGAGCG----AAAAGGTGTGTGAATGAA---ATGAAA----------------------------CCAA----------TCC---------------------ATAC--TGAT---GATAATTTC------A---TTTCCTTTCCTT-----------------------------------------------------------T---GT---------TTTTTA-TTAGGAACAGGGCC---------T---TAAGGAACGTGCCGATCAAATTGAA-----GCTAA--GCTAAACTTCACCACAAATTTACAATACGCAACATTAGCATTATTAGTGCTACTGTTTGCCGGCTTCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................TAGGACGAGCGAGCG----AAAAGG.........................................................................................................................................................................................................................................................................................................................................................2111.00110
droWil2
TTCATGGTGCTGGT--------------------------------------------GT-CAAAAGTTGTGGCGGTGCAATTAGCGA-------------------------------TGATGGTGGTAATTCATTTGTGAATAAAGTTGATGACGGCAAAAATGCAGCAGCTGTAAGTCCATCCGAC------ATCA------------------CATA------------CTC----------------TTCCCTTAATCCACTTATCCTTA----TC----CATTTCGT---TG---------TCTACTTACAGCTGAA------------------GCTGCAGGCCC---ACAT-------------------GACCTCCCGTACCCTAAAATTACAATATGTGATTGTGGCATTACTTGTGCTGCTGTGTGCTCTCCTCAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................TTA----TC----CATTTCGT---TG---------TCTACTTACAG.................................................................................................................................2612.00220000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACTTGTGCTGCTGTGTGC.........2112.00200020
.................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACTTGTGCTGCTGTGT...........1911.00100010
....................................................................................................................................................TTGATGACGGCAAAAATGCAGC.....................................................................................................................................................................................................................................................................................2211.00100001
.....GGTGCTGGT--------------------------------------------GT-CAAAAGTTG.........................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
..........................................................GT-CAAAAGTTGTGGCGGTGCAATT............................................................................................................................................................................................................................................................................................................................................................................2411.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGATTGTGGCATTACTT.......................2011.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................TACAATATGTGATTGTGGC..............................1911.00101000
..........TGGT--------------------------------------------GT-CAAAAGTTGTGG......................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
.................................................................................TTAGCGA-------------------------------TGATGGTGGTA.............................................................................................................................................................................................................................................................................................................................1811.00101000
dp5
TTGAGAAT----------------------------------------------------------TCATCATCCAAATGCGCAGGCAAGGCGAGCACAGCAACTTTGGACTGT---GCAAAGGGTGGAAAACCGGACGTAAGAAACACAGCTAA-------------------------------TGGCCAG--TTAA---GATTGTGTG------G---TAACCCGTTTAC---------------------------------------------------------------------------TTATT-GCAGTTACA------------------GGACCAGGTCA---AGGCACTGTCTCGGCGCGTTAAGGTTGGAA-------ATTTCGTCCAGTATTTAACGTTGCTTCTGGTACTGTTGCTGTACGCTGCTGTCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTCTGGTACTGTTGCTGTACGT.........2512.0020000000200
..................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTAACGTTGCTTCTGGTACT.....................2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................GCACTGTCTCGGCGCGTTAAGGTTG.................................................................2511.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTTCTGGTACTGTTGCT...............2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................GTCTCGGCGCGTTAAGGTTGG................................................................2111.0010100000000
.......................................................................................................................AAAGGGTGGAAAACCGGAC.....................................................................................................................................................................................................................................................................................................................1911.0010100000000
............................................................................................GAGCACAGCAACTTTGGACTGT---..........................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................GGTCA---AGGCACTGTCTCGGCGCGTT........................................................................2511.0010100000000
..................................................................................................AGCAACTTTGGACTGT---GCAAAGG...................................................................................................................................................................................................................................................................................................................................2311.0010000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGTTGCTGTACGCTGCT.....2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................GCACTGTCTCGGCGCGTTAAG.....................................................................2111.0010100000000
........................................................................................................TTTGGACTGT---GCAAAGGGTGGC..............................................................................................................................................................................................................................................................................................................................2211.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTAACGTTGCTTCTGG.........................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................TCGGCGCGTTAAGGTTGGAA-------ATTTC..................................................2511.0010100000000
droPer2
TTGAGAAT----------------------------------------------------------TCAGCATCCAAATGCGCAGGCAAGGCGAGCACAGCAACTTTGGACTGT---GCAAAGGGTGGAAAACCGGACGTAAGAAACACAGTTAA-------------------------------TGGCCAG--TTAA---GATTGTGTG------G---TAACCCGTTTAC---------------------------------------------------------------------------TTATT-GCAGTTACA------------------GGACCAGGTCA---AGGCACTGTCTCGGCGCGTTAAGGTTGGAA-------ATTTCGTCCAGTATTTAACGTTGCTTCTGGTACTGTTGCTGTACGCTGCTGTCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTAACGTTGCTTCTGG.........................2013.003210000
.............................................................................................................................................................................................................................................................................................................................................................TCA---AGGCACTGTCTCGGCGCGTT........................................................................2313.003300000
........................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTGCTTCTGGTACTGTTGCT...............2412.002200000
................................................................................................................GT---GCAAAGGGTGGAAAACCG........................................................................................................................................................................................................................................................................................................................2011.001000001
........................................................................................................................................................................................................................................................................................................................................................................................AGGTTGGAA-------ATTTCGTCCAGT...........................................2111.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTAACGTTGCTTCT...........................1811.001100000
...................................................................................................GCAACTTTGGACTGT---GCAAAG....................................................................................................................................................................................................................................................................................................................................2111.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTAACGTTGCTTCTGGT........................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................GTCTCGGCGCGTTAAGGTT..................................................................1911.001000001
droAna3
TCGATGATAAGAGCGGATCGG--------------GAGGCGGTGGTGGCAGTAGCGTG-C-ACGGAACGAAGTCTGATTGCGCCAGCAAAGCCAGCAAAACTAGTGTAGATTGC---AAGAAA------------------------------------------TCCGGCTTGGTAGGCATTTATT---------T---------AAAT--------------------------AT-TTCATTACATACA--------------------TTTGA--TTTTGA-------TTTTTT---------CTTTTC-TGAAGAAAT--------------CCCGAGATCCAGCTG---AGGCAATGGCA-----CGACA--GCTGGCATTTACCCAGAACCTACAGTATGTGACGCTGGCCCTACTCCTACTGCTCTTTGCCGGATTTGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGACGCTGGCCCTACTC.......................2011.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTGACGCTGGCCCTACTCCTACTG.................2411.001100000
............GCGGATCGG--------------GAGGCGGTGGTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................................................................................................................................................................................................................................................................................................................................................................GGCAATGGCA-----CGACA--GCTGGC...............................................................2111.001010000
...........................................GGTGGCAGTAGCGTG-C-AC................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
..............................................GGCAGTAGCGTG-C-ACGGAAC...........................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.................................................................................................................................................................................................................................................................................................................................AT--------------CCCGAGATCCAGCTG---AGGCA.......................................................................................2211.001000100
......................................................................AGTCTGATTGCGCCAGCAAA.....................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...................................................................................................................................................................................................................................................................................................................................................................AGGCAATGGCA-----CGACA--GCTGGC...............................................................2211.001010000
.........................................................................................................GTAGATTGC---AAGAAA------------------------------------------TCCGGC....................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACGCTGGCCCTACTCCTACTGCTCTTTGC.........2911.001100000
.............................................................................................................................................................................................................................................................................................................................................................CTG---AGGCAATGGCA-----CGACA--GCT..................................................................2211.001100000
droBip1
TCGATGGAAAGGGCGCTG-----------------------GTGGAGGCAGTGGGTTG-C-AGGTGGCGAAGTCTGATTGCGCCGGCAAAGCCAGCAAAACTAGTGTAGATTGC---AAGAAA------------------------------------------TCCGGTGCGGTGGGTATTCCTT---------TCA---AATTTTCTA------T---TAAATCGTTTTAT------------------------------------GATTACA--TTATTT-------TCTTTT---------TCTCAA-AAAGTCAAG------------------CGATCCGGCTG---AGGTAATGGCA-----CGACA--GCTGGCATTTACCCAGAACCTACAGTATGTGACGCTGGCCCTACTCGTACTGCTCTTTGCCGGCTTTGGSizeHit CountTotal NormTotal
No Reads
droKik1
TGGATGAAAAGAAA---------------------------------------------GACAAA-AATGCAGCGGATTGTCAAAGCAAGGCCAGCAAGCCGAGTGTAGACGAC---AAGAGG------------------------------------------TCAAGTACGGTGAGTATCTCGAAGG--GAAATGAGCA---TAATA--------------------------CAA-----TAAATAAT--------------------AATAA--CTATAAACAA---T---AC---------TATTTA-ACAGGGACT------------------CGATTCGTCCG---ATGTGATAGCC-----CGGCA--GCTGGCCTTTACACAGAACCTGCAGTATGTAACTTTGGCGCTGATGGTGCTGCTCTTCGCTGGCTTCGGSizeHit CountTotal NormTotal
No Reads
droFic1
TTGAAGAAAGCAAA---------------------------------------------T-GCAAATCGGAACCCGATTGTGGGAACAAAGCTAGTAAAGCCAGTGTAAACTGC---AAGAAG------------------------------------------TCGGCTACTGTGAGTTT--T------------AA-GT---CAGAA--------------------------ATATTTAAAG---------------------------CACA--TGTTAA-------C-ATTT---------CTTTTT-AAAGGCACA------------------AGACCCAGTAT---CGATGATGGAA-----CGCCA--GTTGGCGTTCACCCAGAACCTGCAATACGTTACGCTGGCGCTGCTTTTGCTGCTGTTCGCGGGATTCGGSizeHit CountTotal NormTotal
No Reads
droEle1
TCGATGCT---------------------------------------------------C-CGAAAGCGCCACCGGATTGTCCGAACAAGGCCAGCAAGGCCAGTGTAGATGGC---AAGAAA------------------------------------------TCCTCGATTGTAAGTGG--CCAAATG-GCCTTGA---AATTCTGTAAATTTATATA------------T------------------------------------TAATA-------------------TATTGAAATTCTATGGAAA-ACAGGGGAA------------------CGATCCGGCCT---CGGTGATGGAG-----CGCCA--GTTGGCATTTACCCAGAACCTGCAATATGTGACGCTGGCGCTGCTTATGCTGCTCTTTGCCGGCTTCGGSizeHit CountTotal NormTotal
No Reads
droRho1
TTGAAGAAAACAAG---------------------------------------------C-CGAAAGCACCTCCGGATTGTCCAAACAAGGCCAGCAAGGCCAGTGTAGACGGC---AAAAAG------------------------------------------TGCTCCGGTGTAAGTGG--CAATATG-GCTATAAATT---TGAGA--------------------------AA-TTTATATA-------------------------AT--A-----------------TATTAAATTACCATGTACA-GCAGGGGCA------------------TGA------AT---CGTCGATAGAG-----CGACA--GTTGGCGTTTACCCAGAACCTGCAATATGTGACGCTGGCGCTGCTATTGCTGCTCTTCGCCGGCTTCGGSizeHit CountTotal NormTotal
No Reads
droBia1
TCGATGAGAACAAA---------------------------------------------C-CCAAAGCGCAACCGGATTGCGCAGCCAAGGCCAGCAAGGCCAGTGTGGACTGC---AAGAAG------------------------------------------CCCGCTGTTGTGAGTTC--CCTTACCGCATTTAATGT---CTAGA--------------------------ATG----------------------------------TTGA--AAGTAA-------TGCATC---------CCACTT-GCAGGGACA------------------CGATCCGGCCT---CGGCGATGGAG-----CGCCA--GTTGGCGTTCACCCAGAATCTGCAATACGTGACGCTGGCGCTGCTATTGCTGCTGTTCGCGGGCTTCGGSizeHit CountTotal NormTotal
No Reads
droTak1
TCGATGAGAACAAG---------------------------------------------G-CCAAGGCGCAACCGGATTGCGCAGCCAAGGCCAGCAAGGCCAGTGTGGACTGC---AAGAAG------------------------------------------TCGGCTGTTGTGAGTTT--CCTTACTGGCTATAAAAT---CCAGA--------------------------AAA----------------------------------TATA--TAGTAA-------TATCTT---------CTTCTA-TTAGGGACA------------------CGATCCGCAGT---CGGCGATGGAG-----CGCCA--GCTGGCCTTCACCCAGAACCTGCAATATGTGACGCTGGCGCTGCTATTGCTGCTCTTCGCGGGCTTCGGSizeHit CountTotal NormTotal
No Reads
droEug1
TCGAAGAAAGTAAG---------------------------------------------C-CTAAAGCGCCACCGGATTGTCCATCGAAGACCAGCAAGTCTTGCGTGGACAGC---AAGAAG------------------------------------------TCGGCTATTGTAAGTTC--C-TTACTAACAACAAACC---GAAGA--------------------------AAA----------------------------------TAAA--TTTTAA-------TATATC---------TTCATA-CCAGGGTCA------------------TGATCCGGCAT---CGGCGATGGAA-----CGTCA--GTTGGCGTTTACCCAGAACCTGCAATACGTGACGCTGGCACTGTTATTGTTGCTCTTTGCCGGCTTCGGSizeHit CountTotal NormTotal
No Reads
dm3
TCGATGAGAACAAA---------------------------------------------T-CAAAAGCGCAGCTAGATTGCGCAAGCAAGTCCAGTAAGGCCAGCGTGGATTGCAGCAAGAAG------------------------------------------TCCGGTGCTGTAAGTATATCCTAGCCAT--GTAAAAG---CGAGTG------TGTA------------C--------------------------------------TTCTA--TTGTAA-------TAATTT---------CGTATA-ATAGGGCGT------------------AGATCCAGCTA---CGGCAATGGAG-----CGTCA--GTTGGCATTCACCCAGAACCTGCAATACGTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................AAGCAAGTCCAGTAAGGCCAG.......................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GCATTCACCCAGAACCTGCAA............................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTGACGCTGGCGCTGTTGTTC....................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATGGAG-----CGTCA--GTTGGCATTC...........................................................2113.0030000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CGGTGCTGTAAGTATATCCT....................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................ATTCACCCAGAACCTGCAATA..........................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AGCTA---CGGCAATGGAG-----CGTCA--GTT..................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AATGGAG-----CGTCA--GTTGGC...............................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000000001000000000000
..............................................................................................................TTGCAGCAAGAAG------------------------------------------TCCGGTGCT.................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACGCTGGCGCTGTTGTTCCTG.................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............................................................................................................TTGCAGCAAGAAG------------------------------------------TCCGGTGC..................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGTTCCTGTTGTTTGCC........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCGATGAGAACAAA---------------------------------------------T-CAAAAGCGCAGC......................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AAGGCCAGCGTGGATTGCAGC..........................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................A---CGGCAATGGAG-----CGTCA--GTTGGC...............................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................TCCAGTAAGGCCAGCGTGGATTGCAGC..........................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................................................CAATGGAG-----CGTCA--GTTGGCAT.............................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGTTGTTCCTGTTGTTTGCCGG......2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.............................................................................................AGTAAGGCCAGCGTGGATTGCAGC..........................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTCCTGTTGTTTGCC........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AGTCCAGTAAGGCCAGCGTG...................................................................................................................................................................................................................................................................................................................................................2012.0020000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATGGAG-----CGTCA--GTTGGCATTCACCCAG.....................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CGGCAATGGAG-----CGTCA--GTTGG................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000
......................................................................AGCTAGATTGCGCAAGCAAGT....................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................TGGAG-----CGTCA--GTTGGCATTCA..........................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...................................................................................................GCCAGCGTGGATTGCAGCAAGAAG------------------------------------------..........................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AAGGCCAGCGTGGATTG..............................................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AATGGAG-----CGTCA--GTTGGCA..............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................AAGGCCAGCGTGGATTGC.............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGCTGTTGTTCCTGT................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AGGGCGT------------------AGATCCAGCTA---CGG.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CA--GTTGGCATTCACCCAGAACCTGC..............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GCGTGGATTGCAGCAAGAAG------------------------------------------TT........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..............................................................................................GTAAGGCCAGCGTGGATTGCA............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.......................................................................................AAGTCCAGTAAGGCCAGCGTGGA.................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................GTAA-------TAATTT---------CGTATA-ATAG.................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................................................................................AGTAAGGCCAGCGTGGATTG..............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................TAAGGCCAGCGTGGATTGC.............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................AGCAAGAAG------------------------------------------TCCGGTGCT.................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCGATGAGAACAAA---------------------------------------------T-CAAAAGCGCA........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................ATCCTAGCCAT--GTAAAAG---CGA...............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................AGTCCAGTAAGGCCAGCGTGG..................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................GATTGCAGCAAGAAG------------------------------------------TCCGGT....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................AGCGTGGATTGCAGCAAGAAG------------------------------------------TCCGG.....................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................GTGGATTGCAGCAAGAAG------------------------------------------TCC.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................TATCCTAGCCAT--GTAAAAG---CG................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................CGTGGATTGCAGCAAGAAG------------------------------------------TCCGGTG...................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TTGTAA-------TAATTT---------CGTATA-ATAGT................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AGATCCAGCTA---CGGCAATGGAG-----CGTCA--G....................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................C--------------------------------------TTCTA--TTGTAA-------TAATTT---------CGTATA-ATAG.................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AATGGAG-----CGTCA--GTTGGCATT............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTGTTGTTCCTGTTGTTT...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGGCATTCACCCAGAACCTG...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................ATTGCGCAAGCAAGTCCAGTA..............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CGCAGCTAGATTGCGCAAGCAA......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTGACGCTGGCGCTGTTGTT.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
TCGATGAGAACAAA---------------------------------------------T-CAAAAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTGTTGTTTGCCGGCTT...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................GTAAGTATATCCTAGCCAT--GTAAAAG---CG................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................T------------------AGATCCAGCTA---CGGCAATGGAG-----CGTC........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GATGAGAACAAA---------------------------------------------T-CAAAAGCGCA........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATCCAGCTA---CGGCAATGGAG-----C...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATGGAG-----CGTCA--GTTGGCA..............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................AGATCCAGCTA---CGGCAATGGAG-----C...........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CAATGGAG-----CGTCA--GTTGGCA..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CTAGATTGCGCAAGCAAGT....................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AGATCCAGCTA---CGGCAATGGAG-----CGTC........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AAGCAAGTCCAGTAAGGCCAGC......................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGACGCTGGCGCTGTTGTTCCTGT................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..GATGAGAACAAA---------------------------------------------T-CAAAAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGATGAGAACAAA---------------------------------------------T-CAAAAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................C--------------------------------------TTCTA--TTGTAA-------TAATTT---------CGT.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AGCTA---CGGCAATGGAG-----CGTCA--G....................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..GATGAGAACAAA---------------------------------------------T-CAAAAGCGCAGCTAGAT.................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TTGTAA-------TAATTT---------CGTATA-ATAG.................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AAGCAAGTCCAGTAAGGCC.........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................GGCGT------------------AGATCCAGCTA---CGGC........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CTA---CGGCAATGGAG-----CGTC........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................GTAAGGCCAGCGTGGATTGCAGCA.........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................GTGGATTGCAGCAAGAAG------------------------------------------TCCGGTGA..................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......AGAACAAA---------------------------------------------T-CAAAAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CAAA---------------------------------------------T-CAAAAGCGCAGCTAG...................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AGCAAGAAG------------------------------------------TCCGGTGCTGGC..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................TGCAGCAAGAAG------------------------------------------TCCGGTGCT.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AGCTA---CGGCAATGGAG-----CGTCA--GT...................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CAGCAAGAAG------------------------------------------TCCGGTGCTGTAAGTATT........................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCTGTTGTTCCTGTTGTTTGC.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................T------------------AGATCCAGCTA---CGGCAATGGAG-----C...........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AATGGAG-----CGTCA--GTTGGCATA............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTGTTGTTTGCCGGC.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CGTGGATTGCAGCAAGAAG------------------------------------------TCC.......................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATGGAG-----CGTCA--GTTGGCAA.............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AGAAG------------------------------------------TCCGGTGCTGTAAGTA..........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TTCACCCAGAACCTGCAATA..........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................CAGCGTGGATTGCAGCAAGAAG------------------------------------------TCCGG.....................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CTA---CGGCAATGGAG-----CGTCA--G....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TCCGGTGCTGTAAGTATATC......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GGCATTCACCCAGAACCTGCA.............................................2111.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GAGAACAAA---------------------------------------------T-CAAAAGCGCAG.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................AGGCCAGCGTGGATTGCAGC..........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATGGAG-----CGTCA--GTTGGCATT............................................................2011.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TAGCCAT--GTAAAAG---CGAGTG------T.....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................GTAAGTATATCCTAGCCAT--GT..........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCTGTTGTTCCTGTTG..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................A---CGGCAATGGAG-----CGTCA--GTTG.................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TGGAG-----CGTCA--GTTGGCATTCACCCAG.....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGCTGTTGTTCCTGTTGTTTG..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TA---CGGCAATGGAG-----CGTCA--GTTGGCATT............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TGGAG-----CGTCA--GTTGGCATTCACCCAGA....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CAATGGAG-----CGTCA--GTTGGCATT............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TTGCAGCAAGAAG------------------------------------------TCCGGTG...................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CAAAAGCGCAGCTAGATTGC..............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGCGCTGTTGTTCCTGT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................T------------------AGATCCAGCTA---CGGCAATGG...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................ATTGCAGCAAGAAG------------------------------------------TCCGG.....................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................GCTAGATTGCGCAAGCAAGTCCA.................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GCTA---CGGCAATGGAG-----CGTC........................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GTCA--GTTGGCATTCACCCAGA....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTTGCCGGCTTCG.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GCAAGAAG------------------------------------------TCCGGTGCTG................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AGTAAGGCCAGCGTGGATTGC.............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AGCTA---CGGCAATGGAG-----CGTCA--.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGACGCTGGCGCTGTTGTTCC...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTTGTTTGCCGGCTTCGG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................CGTGGATTGCAGCAAGAAG------------------------------------------..........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGTTCCTGTTGTTTGCC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATACGTGACGCTGGCGCTGTTG.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................GTAAGTATATCCTAGCCAT--GTAAAAG---C.................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TGGATTGCAGCAAGAAG------------------------------------------TCCGGTGC..................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATGGAG-----CGTCA--GTTGGCATTCACCCAGA....................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TAAGGCCAGCGTGGATTGCAG...........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGCGCAAGCAAGTCCAGTAAGGCCA........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AGCTAGATTGCGCAAGCAAGTCCA.................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................AGGCCAGCGTGGATTGCAGCA.........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ATA-ATAGGGCGT------------------AGATCCAGC.................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................GGCCAGCGTGGATTGCAGCAA........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TGGAG-----CGTCA--GTTGGCATTCACC........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................ATTGCAGCAAGAAG------------------------------------------TCCGGTG...................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................AAGGCCAGCGTGGATTGCAG...........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATCCAGCTA---CGGCAATGGAG-----CGTCA--.....................................................................2511.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CAAGAAG------------------------------------------TCCGGTGCTGTAAGT...........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................CGCAAGCAAGTCCAGTAAGGCC.........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
........................................................................................................CGTGGATTGCAGCAAGAAG------------------------------------------TC........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................GTGGATTGCAGCAAGAAG------------------------------------------TCCGGTGCT.................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TCCAGCTA---CGGCAATGGAG-----CGTCA--GTTG.................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................AATGGAG-----CGTCA--GTTGGCAT.............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TGGCATTCACCCAGAACCTGC..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCGCTGTTGTTCCTGTT...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGTTGTTCCTGTTGTT............1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droSim2
TCGATGAGAACAAG---------------------------------------------T-CAAAAGGGCAGCTAGATTGCGCAAGCAAGTCCAGTAAGGCCAGCGTGGATTGCAGCAAGAAG------------------------------------------TCCGGTGCTGTAAGTATATCCTAGCCAT--GTAAAAG---CGAGTG------CATA------------C--------------------------------------TTATA--TTGTAA-------TCATTT---------GGCATA-CTAGGGAGT------------------AGATCCAGCTA---CGGCAATGGAG-----CGCCA--GTTGGCATTCACCCAGAACCTGCAATATGTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................GATTGCAGCAAGAAG------------------------------------------TCCGGTGCTGG...............................................................................................................................................................................................................................................................................2612.00200020000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGCTGTTGTTCCTGTTGTTTGC.........2511.00100000000100000000
......AGAACAAG---------------------------------------------T-CAAAAGGGC.........................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...............................................................................................................TGCAGCAAGAAG------------------------------------------TCCGGTGCTGG...............................................................................................................................................................................................................................................................................2311.00100000000000010000
..................................................................................................................AGCAAGAAG------------------------------------------TCCGGTGCT.................................................................................................................................................................................................................................................................................1811.00100100000000000000
...................................................................................................GCCAGCGTGGATTGCAGC..........................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..................................................................................................................AGCAAGAAG------------------------------------------TCCGGTGCTGTAAGT...........................................................................................................................................................................................................................................................................2411.00100100000000000000
........................................................................................................CGTGGATTGCAGCAAGAAG------------------------------------------TCCGGTGCT.................................................................................................................................................................................................................................................................................2811.00100010000000000000
..............................................................................................................................................................................GTAAGTATATCCTAGA.................................................................................................................................................................................................................................................................1620.50100000001000000000
droSec2
TCGATGAGAACAAG---------------------------------------------T-CAAAAGCGCAGCTAGATTGCGCAAGCAAGTCCAGTAAGGCCAGCGTGGATTGCAGCAAGAAG------------------------------------------TCCGGTGCTGTAAGTATATCCTAGCCAT--GTAAAAG---CGAGTG------TATA------------C--------------------------------------TTATA--TTGCAA-------TCATTT---------GGCATA-ATAGGGAGT------------------AGATCCAGCTA---CGGCAATGGAG-----CGCCA--GTTGGCATTCACCCAGAACCTGCAATATGTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................CCAGCTA---CGGCAATGGAG-----CGC.........................................................................2111.0010010
.......................................................................................................................................................................................................................................................................................................................................................................AATGGAG-----CGCCA--GTTGGC...............................................................1811.0010010
...........AAG---------------------------------------------T-CAAAAGCGCAGCTAGATTGC..............................................................................................................................................................................................................................................................................................................................................................................2411.0010010
......................................................................AGCTAGATTGCGCAAGCAAGTCCA.................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................CACCCAGAACCTGCAATATGT.......................................2111.0010010
..............................................................................................................TTGCAGCAAGAAG------------------------------------------TCCGG.....................................................................................................................................................................................................................................................................................1811.0010001
..............................................................................................................................................................................................................................................................................................................................................................................................................TGCAATATGTGACGCTGGCGCTG..........................2311.0011000
droYak3
TCGAGGAGAGCAAG---------------------------------------------T-CCAAAGCGCCGCTAGATTGCGCAAACAAGGCCAGTAAGGCCAGCGTGGACTGCAACAAGAAA------------------------------------------TCCGGTGCTGTAAGTAT--CCTAACCCT--TTAAAAC---CGAAAA------TATA------------C--------------------------------------TCATA--GAGTTG-------TAATTT---------CGCATC-ACAGGACGT------------------TGATCCAGCTA---CGGCAATGGAG-----CGCCA--GTTGGCATTCACCCAGAACCTGCAATATGTGACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........GCAAG---------------------------------------------T-CCAAAGCGCCGCTAGATTG...............................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.....................................................................................................CAGCGTGGACTGCAACAAGAA.....................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................AGCTA---CGGCAATGGAG-----CGCCA--GTTGGC...............................................................2711.00100000010000
..............................................................................TGCGCAAACAAGGCCAGTAAGGC..........................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTGACGCTGGCGCTGT.........................2011.00100000010000
..............................................................................................................................................................................................................................................................................................................................GACGT------------------TGATCCAGCTA---CGGCAATGGA..................................................................................2611.00101000000000
............................................................................................CAGTAAGGCCAGCGTGGA.................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
..............................................................................................................................................................................................................................................................................................................................GACGT------------------TGATCCAGCTA---CGGCAAT.....................................................................................2311.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTGACGCTGGCGCTGT.........................2111.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................AGAACCTGCAATATGTGACGCT.................................2211.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCTGTTGTTCCTGTTGTTTGCC........2511.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGCGCTGTTGTTCCTGAC...............2220.50100100000000
droEre2
TCGAGGAGAGCAAG---------------------------------------------T-CCAAAGCGCCGCTAGATTGCGCAAACAAGTCCAGTAAGGGCAGCATGGACTGTAGCAAGAAG------------------------------------------TCTGGTGCTGTAAGTAT--CCAAACCCC--GTAA-AT---CGAGAA------TACA------------T--------------------------------------TTATA--TACTAA-------TAATTT---------TGCATA-ACAGAACGT------------------TGATCCAGCTA---CGGCAATGGAG-----CGCCA--GTTGGCATTCACCCAGAACCTGCAATATGTTACGCTGGCGCTGTTGTTCCTGTTGTTTGCCGGCTTCGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................GTAGCAAGAAG------------------------------------------TCTGGTGCT.................................................................................................................................................................................................................................................................................2011.0010000100
............................................................................................................GACTGTAGCAAGAAG------------------------------------------TCTGGTG...................................................................................................................................................................................................................................................................................2211.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................AATGGAG-----CGCCA--GTTGGCATTCACC........................................................2511.0010000100
...................................................................................AAACAAGTCCAGTAAGGGCAGCATGGAC................................................................................................................................................................................................................................................................................................................................................2811.0010100000
...........................................................................................................................................................................................................................................................................................................................................................AGCTA---CGGCAATGGAG-----CGCCA--GTTGGC...............................................................2711.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................CACCCAGAACCTGCAATATGTTACGCT.................................2711.0011000000
.................................................................................................................................................................................................................................................................................................................................GT------------------TGATCCAGCTA---CGGCAATGGAG-----CGCCA--.....................................................................2911.0010000010
............................................................................................................GACTGTAGCAAGAAG------------------------------------------TCTGGTGCT.................................................................................................................................................................................................................................................................................2411.0010001000
............AG---------------------------------------------T-CCAAAGCGCCGCTAGATT................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGTTCCTGTTGTTTGCCGGC.....2511.0010100000
..............................................................................................................CTGTAGCAAGAAG------------------------------------------TCTGGTG...................................................................................................................................................................................................................................................................................2011.0010000100

Generated: 05/16/2015 at 09:45 PM