ID:

dvi_19004

 Coordinate:

scaffold_13049:8523435-8523496 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.1

Flybase annnotation

exon [dvir_GLEANR_12138:4]; exon [dvir_GLEANR_12138:3]; CDS [Dvir\GJ12149-cds]; CDS [Dvir\GJ12149-cds]; intron [Dvir\GJ12149-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------##################################################
AGCTGCATCTGGAGCGTACTCTGGACAGTTATAACTACCTGACGGATGGGGTAAGTTATATTTGAAGCACACACTTGAGGCTGCCCCAACTAACTGGCTTCGTTTGGAATAGGTCAAGGGCAGCGTGGGGAGCATCAACGATGCGGACAACTTCAAGCAGGT
**************************************************........(((((.((((........((((((.............)))))))))).))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V047
embryo
 V116
male body		 SRR060664
9_males_carcasses_total
 M061
embryo
 SRR060665
9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060679
140x9_testes_total
 SRR060689
160x9_testes_total
 M027
male body		 SRR060666
160_males_carcasses_total
 SRR060670
9_testes_total
 SRR060673
9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR1106729
mixed whole adult body
 V053
head
 SRR060658
140_ovaries_total
 SRR060683
160_testes_total
..................................................................................................................CAAGGGCAGCGTGGGGAGC............................. 19 0 1 3.00 3 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GCGGACAACTTCAAGCAGGT 20 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........CTGGAGCGTACTTTGGACAGC..................................................................................................................................... 21 2 1 2.00 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................ATAACTACCTGACGGATGGG................................................................................................................ 20 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................ATAACTACCTGACGGATGG................................................................................................................. 19 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TAACTGGCTTCGTTTGGAATAG.................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................GTTATAACTACCTGACGGATGG................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TATAACTACCTGACGGATGGG................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GTGGGGAGCATCAACGATGCGGACA............. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CAACGATGCGGACAACTTCAA...... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AACTACCTGACGGATGGG................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........CTGGAGCGTACTCTGGACAGTT.................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CAACGATGCGGACAACTTCAAGC.... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CGGACAACTTCAAGCAGGT 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GTCAAGGGCAGCGTGGGGAG.............................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GCGTACTCTGGACAGTTATAAC............................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GGCAAGGGCAGCGTGGGGTGC............................. 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AGCGTGGGGAGCATCAACGAT.................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................GTTATAACTACCTGACGGATGGGG............................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............AGCGTACTCTGGACAGTTATAA................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TAACTACCTGACGGATGGGGT.............................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CAAGGGCAGCGTGGGGAGCAT........................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................GATGGGGTCAAGGGCAGCGTGGGGAG.............................. 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GTCAAGGGCAGCGTGGGG................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AACTACCTGACGGATGGGGT.............................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TCTGGACAGTTATAACTACCTGACGG..................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AGCTGCATCTGGAGCGTACTCTGGACA....................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................GTTATAACTACCTGACGGATGTG................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CAGCGTGGGGAGTATCAA........................ 18 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GTGGGGAGCATCAACGATGC.................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................GGACAACTTCAAGCAGGT 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TAACTACCTGACGGATGGGG............................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
AGCTGCATCTGGAGCGTACTC............................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................GTTATAACTACCTGACGGATGGGGT.............................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................GCTATAACTACCTGACGGAT................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GAGCGTACTCTGGACAGTT.................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................AGTTATAACTACCTGACGGCTGC................................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................ATAACTACCTGACGGATGGGGT.............................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TACCTGACGGATGGGGTC............................................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GTCAAGGGCAGCGTGGGGAGCATC.......................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....CATCTGGAGCGTACTTTGGACAG...................................................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................AGTTATAACTACCTGACGGATGG................................................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CTATAACTACCTGACGGATGGGGT.............................................................................................................. 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCAAGGGCAGCGTGGGGAG.............................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TATAACTACCTGACGGAT................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................CAGTTATAACTACCTGACGG..................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TTTGGACAGCTATAACTACCT.......................................................................................................................... 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................ATGGGGTCAAGGGCAGCGTGG.................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................AGAATAGGTCAAGGTCAG....................................... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................TGAGGGGGTAAGTTATATGTG.................................................................................................. 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................GATGCGGATAACTTC........ 15 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................TCGTTTGGAATAGGAAAA............................................. 18 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................TGGGTTCGTTTGGATTATGT................................................ 20 3 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TGGGGTCAAGGGCAGCGTGG.................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................TTGAGAATAGGTCAAGGTCA........................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCGACGTAGACCTCGCATGAGACCTGTCAATATTGATGGACTGCCTACCCCATTCAATATAAACTTCGTGTGTGAACTCCGACGGGGTTGATTGACCGAAGCAAACCTTATCCAGTTCCCGTCGCACCCCTCGTAGTTGCTACGCCTGTTGAAGTTCGTCCA
**************************************************........(((((.((((........((((((.............)))))))))).))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060667
160_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 V053
head
 SRR060684
140x9_0-2h_embryos_total
 M047
female body
 SRR060670
9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 M027
male body		 M061
embryo
 SRR060671
9x160_males_carcasses_total
 SRR060679
140x9_testes_total
 SRR060665
9_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060681
Argx9_testes_total
 GSM1528803
follicle cells		 SRR060662
9x160_0-2h_embryos_total
 SRR060678
9x140_testes_total
 SRR060680
 9xArg_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 V047
embryo
......................................................................................................AACTCTTATCCAGTTCCAGT........................................ 20 3 20 5.00 100 38 8 0 8 2 0 2 8 7 0 0 4 4 5 4 2 3 0 2 1 0 0 1 1 0
.......................................................................................................ACTCTTATCCAGTTCCCGTC....................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................CCCTCGTAGTTGCTACGGGGG.............. 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TCTTATCCAGTTCCAGTA....................................... 18 3 20 0.90 18 0 0 0 7 0 0 7 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 1
................................................................................GACGGGGTTGACTGACCG................................................................ 18 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................AACCCTTATCCAGTTCCAG......................................... 19 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TCTTATCCAGTTCCAGTAGC..................................... 20 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CCTTATCCAGTTCCAGTA....................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................ACCTTATCCAGCTCCCGC........................................ 18 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................ATCTTATCCAGTTCCAGTA....................................... 19 3 15 0.20 3 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TCTTATCCAGTTCCAGTCA...................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................AACACTTATCCAGTTCCAG......................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................ACTCTTATCCAGCTCCCG......................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:8523385-8523546 - dvi_19004 AGCTGCATC----TGGAGCGTACTCTGGACAGTTATAACTACCTGACGGATGGGGTAAGT----TATA---T--------TT----------GAAGCACACAC---------------------TTGAGGCTGC-------------CCCAACTAACTGGC------T----------------------------T----------CGTTTGGAA----------------------------------------------------------------------------TAGGTCAAGGGCAGCGTG---------GGGAGCA-TCAACGATGCGGACAACTTCAAGCAGGT
droMoj3 scaffold_6680:6816443-6816602 + AGCTCCACC----TGGAGCGCACGCTGGAGAGCTACAACTATCTGACCGATGGCGTAAGC----TAGCAAGC------------------------------------------AATCACAGCTTAAAGAG---C-----------TTTCCTCTAATTGTC---------------------------------------------TCTATCTCAT----------------------------------------------------------------------------CAGGTCAAGGGCAGCGTG---------AAGAGCA-TCGATGATGTGGACAACTTCAAGCAGGT
droGri2 scaffold_15110:7543774-7543934 - AACTGCACT----TGGAGCGTACTCTGGATAGTTATAACTATCTGACCGATGGGGTAAGT----TAGC---C--------TC----------GAAACAT-----------------------------------TTTTGGTTATGTCCATATCTAACTGTT------T----------------------------A----------CCCTTCTCT----------------------------------------------------------------------------CAGCTCAAGGGCACCGTA---------AGCAGCA-TCAATGATGCGGAAAACTTTAGACAGGT
droWil2 scf2_1100000004762:5229210-5229383 + AGTTACGTC----TGGAGCGGGCTCTGGACACCTACAGCTATCTAAGTGATGGGGTAAGT----TACAG--T--------TTTTACGCC---GAGACATCTAT---------------------TAAAAGATGGTAAAAC--------------AAATATT------T----------------------------T-------T-ATTAACACGA----------------------------------------------------------ACG---------------CAGCTTAAAGGCAGTGTG---------CCATCAA-TAAACGATGCAGAGAACTTCAAGTCGGT
dp5 4_group1:2568049-2568209 + AGTCGCCTCGATTTGGGTGCAGCTGCGGAT---TATAAGTG----------------AGT----CGAAA--------------------TGGTTG-------C-----------------------------------CC--TTGTTCGCTCTAAACTACT------A----------------------------TATTTTC---GCTCCCCCAA------------------------------------------------CAGATATCTA--ACAGGTGGGAAT-----------AGCATAACCTG---------CGAAGGACGCGATGATGCCGCTGAGTTCTCGGATAT
droPer2 scaffold_32:700597-700808 + AACTGCGCC----TGGAGAGGGCTTTGGACAGCTATAACTACCTCAGCGATGGGGTAAGT----ACGA---G--------TA----------GA---TCATGCCAT-------C----------TAAAGG------------------GGCTATAATCCTC------T----------------------------------------ACAATCCACTCTCTCTCCCTCTCTCTCTCTCTCCCTCTCTCTCTGTCTCTGTCTGTGTCTCTTT--------------------CAGCTTAAGGGAAACCTC---------TCGAGCA-TCGATGATGCACAGAACTTCAAGCAGGT
droAna3 scaffold_13337:6587047-6587213 - AACTGCGTC----TGGAGCGGGCTCTGGACACCTACAGCTACCTCAGCGATGGAGTAAGT----TAAGA--T--------TT----------GAAGAATCTACTAT-------T---------CCAAAGAGTAA-------------TCTTACCAATTCT--------------------------------------------T-ATTGAATCTA----------------------------------------------------------------------------TAGCAAAAGGGCAATGTG---------TCCACCA-TCAACGACTTGGAAAACTTCAAGCAGGT
droBip1 scf7180000396709:318352-318520 - AACTGCGTC----TGGAGCGGGCTCTGGACAGCTACAGTTACCTCACCGATGGGGTAAGC----TAAGA--T--------TT----------TAAGAGGCT-----------------------ACGATTC---TATTAC--TAATTGAAA--CCATTCTC------C-----------------------------------TT-TTTGAATCCA----------------------------------------------------------------------------CAGAAAAAGGGAAATGTG---------TCCACCA-TCAACGACTTGGAAAACTTCAAGCAAGT
droKik1 scf7180000302441:1976206-1976370 - AGCTGCGTC----TGGAGCGGGCTCTGGACACCTACAGCTACCTGACCGATGGGGTGAGC----TTCTAGGC--------TT----------GA---TTT-----------------------CTTTAGAGGAT-------------TCTTTATAAACTCT------A----------------------AAC----------TC-TTTTATTCTA----------------------------------------------------------------------------CAGCTCAAGGGCAGCGTG---------TCGAGCA-TCAACGATGCGGACAACTTCCGGCAGGT
droFic1 scf7180000454113:753197-753363 - AGCTGCGTT----TGGAGCGGGCTCTGGACACTTATAGCTACCTGACCGATGGGGTAAGT----CGGTG--T--------CA----------TAAGATAATATAATATGATACA----------TAAAAT------------------AATAACAAATTTA------A----------------------------------------ATAATAAT----------------------------------------------------------------------------CAGCTCAAAGGCAGCGTG---------ACGAGCA-TCAACGATGCGGACAACTTCAAGCAGGT
droEle1 scf7180000491347:224281-224440 + AGTTGGTGC----TGGGTGAGTCCAAGAATCCTT--TTCTATTTTA-----------GAC----TAGTTAGT------------------------------------------AA-------------------------------TCATATAA-------------------------------------------------G-TTCTTTTGAA------------------------------------------------CAGATCACCAGGACAAGTTTGAGTTCCTCA--ACATGGGCGGCGCACCGGATATTGAACGGG-TCTCGGATGCGGACCAGTTCAACGAAAC
droRho1 scf7180000779696:23126-23305 - AACTACGTC----TGGAGCGGGCTCTGGACAGATACAGTTACCTGACCGACGGGGTAAGT----GGGTCCTTAAAAGGGA---------TAA---------------------------------------------------------------ATTCTCTATCCTGTACCCTGAACCTCTGTTTACTAAACTCT--------C-TTCCAATTCA----------------------------------------------------------------------------CAGCTCAATGGCAGCGTG---------ACGAGCA-TCAACGATGCTGAAAGCTTTAAGCAGGT
droBia1 scf7180000300910:1431276-1431448 + AACTGCGTC----TGGAGCGGGCTCTGGACAGATACAGCTACCTGACAGATGGGGTAAGTCTCTGGGTCTCTGGTAGAGT---------TGGATG-------TC----------AA---------------------TAA--C-ATCGATTCCTACTCCCT------G-----------------------------------AA-TTTCGATCCC----------------------------------------------------------------------------CAGCTCAAGGGCAGTGTG---------GCGAGCA-TCAACGATGCGGAGAACTTCAAGCAGGT
droTak1 scf7180000412807:168336-168505 + ATCCGGAAT----TGGTGCTGGGT--------------------------------------------AATC----------------------------------------------------TTGAAAA---TCTT-------------------------CCCTAGATTCAGCATCAGTATTTTTAATATTCT-----TGTT-TCTTTTCTAA------------------------------------------------CAGATCACCAGGACAAGTTCCAGTTCCTCA--ACATGGGCGGAGCTCCGGAAATAGAACGCG-TCTCGGATGCAGACCAGTTCAACGAAAC
droEug1 scf7180000409007:150217-150377 + AATTGCGTC----TGGAGCGGGCTCTGGGCACATATAACTACCTGACCGACGGGGTAAGT----GGATCTCT----------------------------------------------------TAAAGAC---AACTGG--AACTAAAAATCTAATCTTT------G-----------------------------------AG-T-TCAATTCA----------------------------------------------------------------------------CAGCAAAACGGCAGCGTG---------GCGAGCA-TCAACGATGCGGAAAGCTTCAAGCTGGT
dm3 chr3L:1326786-1326947 + AACTGCGCC----TGGAGCGGGCTCTGGACACTTATAGCTACCTGACAGATGGGGTAAGT----GGGCAGCC----------------------------------------------------TGGAGGG---TATTGA--CAATTGGTCTCTGATCTTC------G-----------------------------------AG-TTCTAATCCA----------------------------------------------------------------------------CAGCTCAATGGCACCGTG---------ACGAGAA-TTAACGATGCGGACAGCTTCAAGCAGGT
droSim2 3l:1250301-1250462 + AACTGCGTC----TGGAGCGGGCTCTGGACACCTATAGCTACCTGACGGATGGGGTAAGT----GGGCAGCC----------------------------------------------------TAGAGGG---TATTGG--CAATAGGTCTCTGATCTTC------G-----------------------------------AA-TTCTAATCCA----------------------------------------------------------------------------CAGCTCAATGGCTCCGTG---------ACGAGCA-TTAACGATGCGGACAGCTTCAAGCAGGT
droSec2 scaffold_2:1369466-1369627 + AACTGCGTC----TGGAGCGGGCTCTGGACACCTATAGCTACCTGACGGATGGGGTAAGT----GGGCAGCC----------------------------------------------------TGGAGGG---TATTGG--GAATAGGTTTCTGATCTTC------G-----------------------------------AA-TTCTAATCCA----------------------------------------------------------------------------CAGCTCAATGGCTCCGTG---------ACGAGCA-TTAACGATGCGGACAGCTTCAAGCAGGT
droYak3 3L:1285609-1285778 + AACTGCGTC----TGGAGCGGGCTCTGGACACATATAGCTACCTCACGGACGGGGTGAGT----AGGCAGTT----------------------------------------------------TGGAGGG---GGTTTG--CCATACGTCTCTGATCCTT------A----------------------------AACCTTGAATCTTTAAACCA----------------------------------------------------------------------------CAGACCAATGGCACCGTG---------ACGAGCA-TTAACGATGCGGACAGCTTCAAGCAGGT
droEre2 scaffold_4784:1309650-1309811 + AACTGCGTC----TGGAGCGGGCTCTGGACACATATAGCTACCTCACGGACGGGGTGAGT----AGGCAGCC----------------------------------------------------TGGATGG---GGTGGG--CAATAGGTCTCTGATCCTC------G-----------------------------------AA-TTCTAATCCA----------------------------------------------------------------------------CAGCCCAATGGCACTGTG---------ACGAGCA-TTGACGATGCGGACAGCTTTAAGCAGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGCTGCATC----TGGAGCGTACTCTGGACAGTTATAACTACCTGACGGATGGGGTAAGT----TATA---T--------TT----------GAAGCACACAC---------------------TTGAGGCTGC-------------CCCAACTAACTGGC------T----------------------------T----------CGTTTGGAA----------------------------------------------------------------------------TAGGTCAAGGGCAGCGTG---------GGGAGCA-TCAACGATGCGGACAACTTCAAGCAGGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................CAAGGGCAGCGTG---------GGGAGC..............................1913.003001000000000001000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GCGGACAACTTCAAGCAGGT2012.002001000000000000000000000000000000010000000000000000000000000000
..................................ATAACTACCTGACGGATGGG.............................................................................................................................................................................................................................................................................................................2012.002001000000000000000000000000000000000000100000000000000000000000
..................................ATAACTACCTGACGGATGG..............................................................................................................................................................................................................................................................................................................1912.002001000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................TAACTGGC------T----------------------------T----------CGTTTGGAA----------------------------------------------------------------------------TAG............................................................2211.001000000000000000000000000000000010000000000000000000000000000000
...............................GTTATAACTACCTGACGGATGG..............................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................................TATAACTACCTGACGGATGGG.............................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................GTG---------GGGAGCA-TCAACGATGCGGACA.............2511.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CAACGATGCGGACAACTTCAA......2111.001000000000000000000000100000000000000000000000000000000000000000
....................................AACTACCTGACGGATGGG.............................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000001000000000000000000000000
........C----TGGAGCGTACTCTGGACAGTT.................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CAACGATGCGGACAACTTCAAGC....2311.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CGGACAACTTCAAGCAGGT1911.001000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTCAAGGGCAGCGTG---------GGGAG...............................2011.001001000000000000000000000000000000000000000000000000000000000000
.................GCGTACTCTGGACAGTTATAAC............................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AGCGTG---------GGGAGCA-TCAACGAT....................2111.001000000000000000010000000000000000000000000000000000000000000000
...............................GTTATAACTACCTGACGGATGGGG............................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................AGCGTACTCTGGACAGTTATAA.............................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
...................................TAACTACCTGACGGATGGGGT...........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................CAAGGGCAGCGTG---------GGGAGCA-T...........................2111.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTCAAGGGCAGCGTG---------GGG.................................1811.001000000000000000100000000000000000000000000000000000000000000000
....................................AACTACCTGACGGATGGGGT...........................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.......................TCTGGACAGTTATAACTACCTGACGG..................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
AGCTGCATC----TGGAGCGTACTCTGGACA....................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................GTG---------GGGAGCA-TCAACGATGC..................2011.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................GGACAACTTCAAGCAGGT1811.001001000000000000000000000000000000000000000000000000000000000000
...................................TAACTACCTGACGGATGGGG............................................................................................................................................................................................................................................................................................................2011.001000000000000000000000001000000000000000000000000000000000000000
AGCTGCATC----TGGAGCGTACTC..........................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
...............................GTTATAACTACCTGACGGATGGGGT...........................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
...............GAGCGTACTCTGGACAGTT.................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
..................................ATAACTACCTGACGGATGGGGT...........................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................TACCTGACGGATGGGGTC..........................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTCAAGGGCAGCGTG---------GGGAGCA-TC..........................2411.001000100000000000000000000000000000000000000000000000000000000000
..............................AGTTATAACTACCTGACGGATGG..............................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TCAAGGGCAGCGTG---------GGGAG...............................1911.001000000000000001000000000000000000000000000000000000000000000000
.................................TATAACTACCTGACGGAT................................................................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
.............................CAGTTATAACTACCTGACGG..................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGCTCCACC----TGGAGCGCACGCTGGAGAGCTACAACTATCTGACCGATGGCGTAAGC----TAGCAAGC------------------------------------------AATCACAGCTTAAAGAG---C-----------TTTCCTCTAATTGTC---------------------------------------------TCTATCTCAT----------------------------------------------------------------------------CAGGTCAAGGGCAGCGTG---------AAGAGCA-TCGATGATGTGGACAACTTCAAGCAGGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................GTCAAGGGCAGCGTG---------AAG.................................1812.002100001
...................GCACGCTGGAGAGCTACAA.............................................................................................................................................................................................................................................................................................................................1912.002200000
.......................................................................................................................................................................................................................................................................................................GTCAAGGGCAGCGTG---------AAGAGC..............................2112.002100001
.............................GAGCTACAACTATCTGACCGATGGC.............................................................................................................................................................................................................................................................................................................2511.001100000
....CCACC----TGGAGCGCACGCTGGAG.....................................................................................................................................................................................................................................................................................................................................2211.001100000
....CCACC----TGGAGCGCACGCTGGAGAGC..................................................................................................................................................................................................................................................................................................................................2511.001100000
.....CACC----TGGAGCGCACGCTGGAGAGC..................................................................................................................................................................................................................................................................................................................................2411.001100000
................................................................................................................................................................................................................................................................................................................AGCGTG---------AAGAGCA-TCGATGATGTGGA...............2611.001100000
.................GCGCACGCTGGAGAGCTACAACT...........................................................................................................................................................................................................................................................................................................................2311.001000001
..............................................................................................................................................................................................................................................................................................................................................TGTGGACAACTTCAAGCAG..1911.001100000
.....CACC----TGGAGCGCACGCTGGAGAG...................................................................................................................................................................................................................................................................................................................................2311.001100000
............................................................................................................................................................................................................................................................................................................GGGCAGCGTG---------AAGAGCA-TC..........................1911.001000001
....CCACC----TGGAGCGCACGCTGGAGAGCT.................................................................................................................................................................................................................................................................................................................................2611.001100000
..............GGAGCGCACGCTGGAGAGCTACAAC............................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................................G---------AAGAGCA-TCGATGATGTGGACAACTT.........2711.001100000
.................................................................................................................................................................................................................................................................................................................................................GGACAACTTCAAGCAGGT1811.001100000
...............................................................................................................................................................................................................................................................................................................................................GTGGACAACTTCAAGCAG..1811.001100000
...............................GCTACAACTATCTGACCGATGGCGT...........................................................................................................................................................................................................................................................................................................2511.001100000
................................CTACAACTATCTGACCGATGGCGT...........................................................................................................................................................................................................................................................................................................2411.001100000
..................CGCACGCTGGAGAGCTACAA.............................................................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................ATGTGGACAACTTCAAGCAG..2011.001000001
...............GAGCGCACGCTGGAGAGCTACAAC............................................................................................................................................................................................................................................................................................................................2411.001100000
...................GCACGCTGGAGAGCTACAACT...........................................................................................................................................................................................................................................................................................................................2111.001100000
.................................TACAACTATCTGACCGATGGC.............................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................GTGGACAACTTCAAGCAGGT2011.001100000
...................................................................................................................................................................................................................................................................................................................GTG---------AAGAGCA-TCGATGATGT..................2011.001000001
................................................................................................................................................................................................................................................................................................................AGCGTG---------AAGAGCA-TCGATGAT....................2111.001100000
.....CACC----TGGAGCGCACGCTGGAGAGCT.................................................................................................................................................................................................................................................................................................................................2511.001100000
.........................................................................................................................................................................................................................................................................................................CAAGGGCAGCGTG---------AAGAGC..............................1911.001000001
...................................................................................................................................................................................................................................................................................................................................GCA-TCGATGATGTGGACAACTTC........2311.001100000
droGri2
AACTGCACT----TGGAGCGTACTCTGGATAGTTATAACTATCTGACCGATGGGGTAAGT----TAGC---C--------TC----------GAAACAT-----------------------------------TTTTGGTTATGTCCATATCTAACTGTT------T----------------------------A----------CCCTTCTCT----------------------------------------------------------------------------CAGCTCAAGGGCACCGTA---------AGCAGCA-TCAATGATGCGGAAAACTTTAGACAGGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..CTGCACT----TGGAGCGTACTCTGGAT.....................................................................................................................................................................................................................................................................................................................................2411.00110
droWil2
AGTTACGTC----TGGAGCGGGCTCTGGACACCTACAGCTATCTAAGTGATGGGGTAAGT----TACAG--T--------TTTTACGCC---GAGACATCTAT---------------------TAAAAGATGGTAAAAC--------------AAATATT------T----------------------------T-------T-ATTAACACGA----------------------------------------------------------ACG---------------CAGCTTAAAGGCAGTGTG---------CCATCAA-TAAACGATGCAGAGAACTTCAAGTCGGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.GTTACGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................24146.00463428110
........................................................................................................................................................................................................................................................................................................................................AAACGATGCAGAGAACTTCAAGTC...24124.0024031470
AGTTACGTC----TGGAGCGGGCT...........................................................................................................................................................................................................................................................................................................................................2018.00800620
.GTTACGTC----TGGAGCGGGCT...........................................................................................................................................................................................................................................................................................................................................1917.00702320
....................................................................................................................................................................................................................................................................................................................................AA-TAAACGATGCAGAGAACTTCAAGTC...2717.00700700
............................................................................................................................................................................................................................................................................................................................................GATGCAGAGAACTTCAAGTC...2017.00701420
AGTTACGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2516.00601230
....................................................................................................................................................................................................................................................................................................................................AA-TAAACGATGCAGAGAACTT.........2115.00500320
........................................................................................................................................................................................................................................................................................................................................AAACGATGCAGAGAACTT.........1815.00500050
.....................................................................................................................................................................................................................................................................................................................................A-TAAACGATGCAGAGAACTTCAAGTC...2615.00500410
............................................................................................................................................................................................................................................................................................................................................GATGCAGAGAACTTCAAGTCG..2115.00501220
.GTTACGTC----TGGAGCGGGCTCTG........................................................................................................................................................................................................................................................................................................................................2214.00401210
............................................................................................................................................................................................................................................................................................................................................GATGCAGAGAACTTCAAGTCGGT2314.00400220
........................................................................................................................................................................................................................................................................................................................................AAACGATGCAGAGAACTTCAAGTCG..2514.00400400
.GTTACGTC----TGGAGCGGGCTCT.........................................................................................................................................................................................................................................................................................................................................2114.00411200
.GTTACGTC----TGGAGCGGGC............................................................................................................................................................................................................................................................................................................................................1813.00300030
....ACGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2113.00300120
..TTACGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2313.00301110
.............................................................................................................................................................................................................................................................................................................................................ATGCAGAGAACTTCAAGTCGGT2213.00300120
........................................................................................................................................................................................................................................................................................................................................AAACGATGCAGAGAACTTCAAGT....2313.00300300
.....CGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2013.00301011
.....................................................................................................................................................................................................................................................................................................................................A-TAAACGATGCAGAGAACTTCAAGTCG..2713.00300210
...TACGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2213.00300030
...............................................................................................................................................................................................................................................................................................................................................GCAGAGAACTTCAAGTCGGT2013.00300120
.....................................................................................................................................................................................................................................................................................................................................A-TAAACGATGCAGAGAACTT.........2012.00200200
.................GCGGGCTCTGGACACCTACAGCT...........................................................................................................................................................................................................................................................................................................................2312.00200020
........................CTGGACACCTACAGCTAT.........................................................................................................................................................................................................................................................................................................................1812.00200020
........................................................................................................................................................................................................................................................................................................................................AAACGATGCAGAGAACTTC........1912.00220000
.............................CACCTACAGCTATCTAAGTGATGGGC............................................................................................................................................................................................................................................................................................................2612.00202000
......GTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................1912.00200020
...........................................................................................................................................................................................................................................................................................................................................CGATGCAGAGAACTTCAAGT....2012.00200110
.......................................................................................................................................................................................................................................................................................................................................TAAACGATGCAGAGAACTTCAAGTC...2511.00100100
.GTTACGTC----TGGAGCGGGCTCTGGG......................................................................................................................................................................................................................................................................................................................................2411.00110000
...............GAGCGGGCTCTGGACACCTACA..............................................................................................................................................................................................................................................................................................................................2211.00101000
.GTTACGTC----TGGAGCGGGCTCTGGACAC...................................................................................................................................................................................................................................................................................................................................2711.00100010
........C----TGGAGCGGGCTCTGGACACCT.................................................................................................................................................................................................................................................................................................................................2211.00100100
........................................................................................................................................................................................................................................................................................................................................AAACGATGCAGAGAACTTCAAGTCGGT2711.00100100
...............................................................................................................................................................................................................................................................................................................................................GCAGAGAACTTCAAGTCG..1811.00100010
...............GAGCGGGCTCTGGACACCTACAG.............................................................................................................................................................................................................................................................................................................................2311.00101000
............................................................................................................................................................................................................................................................................................................................................GATGCAGAGAACTTCAAGT....1911.00100100
..........................................................................................................................................................................................................................................................................................................................................ACGATGCAGAGAACTTCAAGTC...2211.00100100
....................................................................................................................................................................................................................................................................................................................TG---------CCATCAA-TAAACGATGCAGAGAACT..........2711.00101000
........C----TGGAGCGGGCTCTGGACA....................................................................................................................................................................................................................................................................................................................................1911.00100010
...................................................................................................................................................................................................................................................................................................................GTG---------CCATCAA-TAAACGATGCAGAGAA............2611.00100010
...................................................................................................................................................................................................................................................................................................................................CAA-TAAACGATGCAGAGAAC...........2011.00100010
.............................CACCTACAGCTATCTAAGTGAT................................................................................................................................................................................................................................................................................................................2211.00101000
....................................................................................................................................................................................................................................................................................................................................AA-TAAACGATGCAGAGAACTTCAAGTCG..2811.00100100
.........................................................................................................................................................................................................................................................................................................................................AACGATGCAGAGAACTTCAAGTC...2311.00100010
..........................................................................................................................................................................................................................................................................................................................................ACGATGCAGAGAACTTCAAGTCGGT2511.00100100
........C----TGGAGCGGGCTCTGGACACCTACA..............................................................................................................................................................................................................................................................................................................................2511.00100010
...................................................................................................................................................................................................................................................................................................................................CAA-TAAACGATGCAGAGAACTTCAAGTC...2811.00100100
...................................................................................................................................................................................................................................................................................................................................CAA-TAAACGATGCAGAGAACTTCAAGT....2711.00100010
........................CTGGACACCTACAGCTATCTAAGT...................................................................................................................................................................................................................................................................................................................2411.00101000
..........................GGACACCTACAGCTATCTAAGT...................................................................................................................................................................................................................................................................................................................2211.00101000
.............................................................................................................................................................................................................................................................................................................................................ATGCAGAGAACTTCAAGTC...1911.00100010
.....................................................................................................................................................................................................................................................................................................................................A-TAAACGATGCAGAGAACT..........1911.00100010
...................................................................................................................................................................................................................................................................................................................GTG---------CCATCAA-TAAACGAT....................1811.00100010
................AGCGGGCTCTGGACACCT.................................................................................................................................................................................................................................................................................................................................1811.00100010
..............................................................................................................................................................................................................................................................................................................................................TGCAGAGAACTTCAAGTCGG.2011.00100010
....................................................................................................................................................................................................................................................................................................................................AA-TAAACGATGCAGAGAACTTCAAGT....2611.00100100
..............................ACCTACAGCTATCTAAGTGATGGG.............................................................................................................................................................................................................................................................................................................2411.00101000
dp5
AGTCGCCTCGATTTGGGTGCAGCTGCGGAT---TATAAGTG----------------AGT----CGAAA--------------------TGGTTG-------C-----------------------------------CC--TTGTTCGCTCTAAACTACT------A----------------------------TATTTTC---GCTCCCCCAA------------------------------------------------CAGATATCTA--ACAGGTGGGAAT-----------AGCATAACCTG---------CGAAGGACGCGATGATGCCGCTGAGTTCTCGGATATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................GGAAT-----------AGCATAACCTG---------CGAAGGACGC..........................2611.0010100000000
..........................................................................................................................................................................................................................................................................................GGGAAT-----------AGCATAACCTG---------CGAAGGA.............................2411.0010100000000
droPer2
AACTGCGCC----TGGAGAGGGCTTTGGACAGCTATAACTACCTCAGCGATGGGGTAAGT----ACGA---G--------TA----------GA---TCATGCCAT-------C----------TAAAGG------------------GGCTATAATCCTC------T----------------------------------------ACAATCCACTCTCTCTCCCTCTCTCTCTCTCTCCCTCTCTCTCTGTCTCTGTCTGTGTCTCTTT--------------------CAGCTTAAGGGAAACCTC---------TCGAGCA-TCGATGATGCACAGAACTTCAAGCAGGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................A-TCGATGATGCACAGAACTTCAAGCAG..2714.004400000
..................................ATAACTACCTCAGCGATG...............................................................................................................................................................................................................................................................................................................1813.003300000
......................................................GTAAGT----ACGA---G--------TA----------GA---TCATGC............................................................................................................................................................................................................................................................2113.003300000
........................TTGGACAGCTATAACTACCT.......................................................................................................................................................................................................................................................................................................................2013.003300000
........C----TGGAGAGGGCTTTGGAC.....................................................................................................................................................................................................................................................................................................................................1813.003300000
......GCC----TGGAGAGGGCTTTGGACAGCTATAAC............................................................................................................................................................................................................................................................................................................................2913.003300000
...............................................................................................................................................................................................................................................................................................................................................GCACAGAACTTCAAGCAGGT2012.002200000
...............................................................................................................................................................................................................................................................................................................................................GCACAGAACTTCAAGCAG..1812.002200000
................................CTATAACTACCTCAGCGATGGG.............................................................................................................................................................................................................................................................................................................2212.002020000
AACTGCGCC----TGGAGAGGGCTTTGGAC.....................................................................................................................................................................................................................................................................................................................................2612.002110000
........................TTGGACAGCTATAACTACCG.......................................................................................................................................................................................................................................................................................................................2011.001100000
.....CGCC----TGGAGAGGGCTTTGGAC.....................................................................................................................................................................................................................................................................................................................................2111.001100000
.......CC----TGGAGAGGGCTTTGGACA....................................................................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................ATGCACAGAACTTCAAGCA...1911.001100000
.............................................................................................................................................................................................................................................................................................................GGAAACCTC---------TCGAGCA-TCGATGAT....................2411.001010000
.........................................................................................................................................................................................................................................................................................................TAAGGGAAACCTC---------TCGAGCA-T...........................2111.001010000
...................GGGCTTTGGACAGCTATAACTACCTC......................................................................................................................................................................................................................................................................................................................2611.001010000
.................GAGGGCTTTGGACAGCTAT...............................................................................................................................................................................................................................................................................................................................1911.001010000
.................................TATAACTACCTCAGCGATGG..............................................................................................................................................................................................................................................................................................................2011.001010000
......................CTTTGGACAGCTATAACT...........................................................................................................................................................................................................................................................................................................................1811.001100000
..CTGCGCC----TGGAGAGGGCTTTGGACAG...................................................................................................................................................................................................................................................................................................................................2611.001100000
.ACTGCGCC----TGGAGAGGGCTTTGGACA....................................................................................................................................................................................................................................................................................................................................2611.001010000
.............................................................................................................................................................................................................................................................................................................................................ATGCACAGAACTTCAAGCAG..2011.001010000
...............................................................................................................................................................................................................................................................................................................AAACCTC---------TCGAGCA-TCGAT.......................1911.001010000
......GCC----TGGAGAGGGCTTTGGACA....................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................................................................................................A-TCGATGATGCACAGAACTTCAAGCA...2611.001100000
................................................................ACGA---G--------TA----------GA---TCATGCCAC-------..................................................................................................................................................................................................................................................1820.501100000
droAna3
AACTGCGTC----TGGAGCGGGCTCTGGACACCTACAGCTACCTCAGCGATGGAGTAAGT----TAAGA--T--------TT----------GAAGAATCTACTAT-------T---------CCAAAGAGTAA-------------TCTTACCAATTCT--------------------------------------------T-ATTGAATCTA----------------------------------------------------------------------------TAGCAAAAGGGCAATGTG---------TCCACCA-TCAACGACTTGGAAAACTTCAAGCAGGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.ACTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2417.007401020
........................CTGGACACCTACAGCTACCTCAGCGAT................................................................................................................................................................................................................................................................................................................2713.003300000
..CTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2312.002200000
........................CTGGACACCTACAGCTACCTCAGCGATG...............................................................................................................................................................................................................................................................................................................2812.002110000
......GTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................1912.002010001
.ACTGCGTC----TGGAGCGGGCTCTGG.......................................................................................................................................................................................................................................................................................................................................2312.002100010
...............................CCTACAGCTACCTCAGCGAT................................................................................................................................................................................................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................................................................................CAACGACTTGGAAAACTTCA.......2011.001000010
....................................................................................................................................................................................................................................................................................................................................CA-TCAACGACTTGGAAAACTTCA.......2311.001000001
...............................................................................................................................................................................................................................................................................................................CAATGTG---------TCCACCA-TCAACGACTTGGAAA.............2911.001100000
..CTGCGTC----TGGAGCGGGCTCTGG.......................................................................................................................................................................................................................................................................................................................................2211.001100000
AACTGCGTC----TGGAGCGGGCC...........................................................................................................................................................................................................................................................................................................................................2011.001010000
.............................CACCTACAGCTACCTCAGCGATG...............................................................................................................................................................................................................................................................................................................2311.001010000
.............................CACCTACAGCTACCTCAGCGATGGA.............................................................................................................................................................................................................................................................................................................2511.001100000
.....CGTC----TGGAGCGGGCTCTG........................................................................................................................................................................................................................................................................................................................................1811.001100000
................................CTACAGCTACCTCAGCGAT................................................................................................................................................................................................................................................................................................................1911.001001000
.................................................................................................................................................................................................................................................................................................................ATGTG---------TCCACCA-TCAACGAC....................2011.001001000
AACTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2511.001000001
.............................CACCTACAGCTACCTCAGC...................................................................................................................................................................................................................................................................................................................1911.001010000
.......................................................................................................................................................................................................................................................................................................CAAAAGGGCAATGTG---------TCC.................................1811.001010000
..........................GGACACCTACAGCTACCTCAGCGAT................................................................................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................................CA-TCAACGACTTGGAAAACTTC........2211.001010000
............................................CAGCGATGGAGTAAGT----TAAGA--T--------...................................................................................................................................................................................................................................................................................2211.001000010
........................CTGGACACCTACAGCTACCT.......................................................................................................................................................................................................................................................................................................................2011.001010000
.ACTGCGTC----TGGAGCGGGCTCTG........................................................................................................................................................................................................................................................................................................................................2211.001100000
........................CTGGACACCTACAGCTACCTCAGC...................................................................................................................................................................................................................................................................................................................2411.001010000
.................................................................................................................................................................................................................................................................................................................................CACCA-TCAACGACTTGGA...............1811.001010000
................AGCGGGCTCTGGACACCTACAGC............................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
AACTGCGTC----TGGAGCGGGCTCTGGACAGCTACAGTTACCTCACCGATGGGGTAAGC----TAAGA--T--------TT----------TAAGAGGCT-----------------------ACGATTC---TATTAC--TAATTGAAA--CCATTCTC------C-----------------------------------TT-TTTGAATCCA----------------------------------------------------------------------------CAGAAAAAGGGAAATGTG---------TCCACCA-TCAACGACTTGGAAAACTTCAAGCAAGTSizeHit CountTotal NormTotal
No Reads
droKik1
AGCTGCGTC----TGGAGCGGGCTCTGGACACCTACAGCTACCTGACCGATGGGGTGAGC----TTCTAGGC--------TT----------GA---TTT-----------------------CTTTAGAGGAT-------------TCTTTATAAACTCT------A----------------------AAC----------TC-TTTTATTCTA----------------------------------------------------------------------------CAGCTCAAGGGCAGCGTG---------TCGAGCA-TCAACGATGCGGACAACTTCCGGCAGGTSizeHit CountTotal NormTotal
No Reads
droFic1
AGCTGCGTT----TGGAGCGGGCTCTGGACACTTATAGCTACCTGACCGATGGGGTAAGT----CGGTG--T--------CA----------TAAGATAATATAATATGATACA----------TAAAAT------------------AATAACAAATTTA------A----------------------------------------ATAATAAT----------------------------------------------------------------------------CAGCTCAAAGGCAGCGTG---------ACGAGCA-TCAACGATGCGGACAACTTCAAGCAGGTSizeHit CountTotal NormTotal
No Reads
droEle1
AGTTGGTGC----TGGGTGAGTCCAAGAATCCTT--TTCTATTTTA-----------GAC----TAGTTAGT------------------------------------------AA-------------------------------TCATATAA-------------------------------------------------G-TTCTTTTGAA------------------------------------------------CAGATCACCAGGACAAGTTTGAGTTCCTCA--ACATGGGCGGCGCACCGGATATTGAACGGG-TCTCGGATGCGGACCAGTTCAACGAAACSizeHit CountTotal NormTotal
No Reads
droRho1
AACTACGTC----TGGAGCGGGCTCTGGACAGATACAGTTACCTGACCGACGGGGTAAGT----GGGTCCTTAAAAGGGA---------TAA---------------------------------------------------------------ATTCTCTATCCTGTACCCTGAACCTCTGTTTACTAAACTCT--------C-TTCCAATTCA----------------------------------------------------------------------------CAGCTCAATGGCAGCGTG---------ACGAGCA-TCAACGATGCTGAAAGCTTTAAGCAGGTSizeHit CountTotal NormTotal
No Reads
droBia1
AACTGCGTC----TGGAGCGGGCTCTGGACAGATACAGCTACCTGACAGATGGGGTAAGTCTCTGGGTCTCTGGTAGAGT---------TGGATG-------TC----------AA---------------------TAA--C-ATCGATTCCTACTCCCT------G-----------------------------------AA-TTTCGATCCC----------------------------------------------------------------------------CAGCTCAAGGGCAGTGTG---------GCGAGCA-TCAACGATGCGGAGAACTTCAAGCAGGTSizeHit CountTotal NormTotal
No Reads
droTak1
ATCCGGAAT----TGGTGCTGGGT--------------------------------------------AATC----------------------------------------------------TTGAAAA---TCTT-------------------------CCCTAGATTCAGCATCAGTATTTTTAATATTCT-----TGTT-TCTTTTCTAA------------------------------------------------CAGATCACCAGGACAAGTTCCAGTTCCTCA--ACATGGGCGGAGCTCCGGAAATAGAACGCG-TCTCGGATGCAGACCAGTTCAACGAAACSizeHit CountTotal NormTotal
No Reads
droEug1
AATTGCGTC----TGGAGCGGGCTCTGGGCACATATAACTACCTGACCGACGGGGTAAGT----GGATCTCT----------------------------------------------------TAAAGAC---AACTGG--AACTAAAAATCTAATCTTT------G-----------------------------------AG-T-TCAATTCA----------------------------------------------------------------------------CAGCAAAACGGCAGCGTG---------GCGAGCA-TCAACGATGCGGAAAGCTTCAAGCTGGTSizeHit CountTotal NormTotal
No Reads
dm3
AACTGCGCC----TGGAGCGGGCTCTGGACACTTATAGCTACCTGACAGATGGGGTAAGT----GGGCAGCC----------------------------------------------------TGGAGGG---TATTGA--CAATTGGTCTCTGATCTTC------G-----------------------------------AG-TTCTAATCCA----------------------------------------------------------------------------CAGCTCAATGGCACCGTG---------ACGAGAA-TTAACGATGCGGACAGCTTCAAGCAGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................TAACGATGCGGACAGCTTCAAGCAGG.2617.0070000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000000100000
.........................TGGACACTTATAGCTACCTGACAGA.................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTGGACACTTATAGCTACC........................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CAATGGCACCGTG---------ACGAGA..............................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000
......................................................................................................................................................................................................................................................................................................GCTCAATGGCACCGTG---------ACGAG...............................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCGCC----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCT..........1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTAACGATGCGGACAGCTTCAAGCAGG.2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...................................................................................................................................................................................................................................................................................................................GTG---------ACGAGAA-TTAACGATGCGGACA.............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTCAATGGCACCGTG---------ACGAGA..............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AACGATGCGGACAGCTTC........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................ACCGTG---------ACGAGAA-TTAACGATGC..................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AACGATGCGGACAGCTTCAAGC....2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGGAGCGGGCTCTGGACACTTATAGC............................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................................................................................................................................................................................................................................GTG---------ACGAGAA-TTAACGATGCGGAC..............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GTG---------ACGAGAA-TTAACGATGCGGA...............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000
..CTGCGCC----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GCTCAATGGCACCGTG---------ACGAGA..............................2212.0020000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AATGGCACCGTG---------ACGAG...............................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................G---------ACGAGAA-TTAACGATGCGGA...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TAACGATGCGGACAGCTTCAAGCAG..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGCGCC----TGGAGCGGGCTCT.........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AATGGCACCGTG---------ACGAGAA-TTAACG......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...TGCGCC----TGGAGCGGGCTCTGGACAC...................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.ACTGCGCC----TGGAGCGGGCTCT.........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGC...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GTAAGT----GGGCAGCC----------------------------------------------------TGGAGGG---.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AACTGCGCC----TGGAGCGGGCT...........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....CGCC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................ATGGCACCGTG---------ACGAGAA-............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GTG---------ACGAGAA-TTAACGATGCGGT...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACTTATAGCTACCTGACAGATGG..............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GAA-TTAACGATGCGGACAGCTT.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CGATGCGGACAGCTTCAAGC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................ACCGTG---------ACGAGAA-TTAACGATGCATC...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GAGAA-TTAACGATGCGGA...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................TCTGATCTTC------G-----------------------------------AG-TTCTAATCCA----------------------------------------------------------------------------CA.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AACGATGCGGACAGCTTCA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTTATAGCTACCTGACAGATGG..............................................................................................................................................................................................................................................................................................................2211.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGGCACCGTG---------ACGAGAA-TTAACG......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................TTAACGATGCGGACAGCTTCG.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACTGCGCC----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCC----TGGAGCGGGCTCTGGACACTT.................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................GTAAGT----GGGCAGCC----------------------------------------------------TGGAGGG---T............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................G---------ACGAGAA-TTAACGATGCGGACAGCT..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CAGCC----------------------------------------------------TGGAGGG---TATTGG--A....................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................G---------ACGAGAA-TTAACGATGCGGACAGCTT.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....CGCC----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTAACGATGCGGACAGCTT.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................ACCGTG---------ACGAGAA-TTAACGATG...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CAATGGCACCGTG---------ACGAG...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................CGTG---------ACGAGAA-TTAACGATGCGGA...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........................................................................................................................................................................................................................................................................................................................................TAACGATGCGGACAGCTTCAAG.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................CAATTGGTCTCTGATCTTC------G-----------------------------------AG-TT...................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....CGCC----TGGAGCGGGCTCTGGACACT..................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...TGCGCC----TGGAGCGGGCTCTG........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................ACGATGCGGACAGCTTCAAGCAGGT2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................GT----GGGCAGCC----------------------------------------------------TGGAGGG---TATTGA--C....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..........................................................................................................................................................................................................................................................................................................AATGGCACCGTG---------ACGAGA..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................GCTCAATGGCACCGTG---------ACG.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TCAATGGCACCGTG---------ACGA................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CCGTG---------ACGAGAA-TTAACGATGCG.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCTTCAAGC....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.ACTGCGCC----TGGAGCGGGCTCTGG.......................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CTGCGCC----TGGAGCGGGCTCTGGACA....................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
........................................................................................................................................................................................................................................................................................................................................TAACGATGCGGACAGCTTC........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................CGTG---------ACGAGAA-TTAACGAT....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................ACACTTATAGCTACCTGACAGAT................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CTGCGCC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................GTG---------ACGAGAA-TTAACGAT....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................GGCTCTGGACACTTATAG.............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACTGCGCC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GGCACCGTG---------ACGAGAA-TTAAC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................ATGGCACCGTG---------ACGAGAA-TTAACG......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................TAACGATGCGGACAGCTTCAAGC....2311.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCTTCAAGCA...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................CACTTATAGCTACCTGACAGATGG..............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CAATGGCACCGTG---------ACGAGC..............................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................AAGT----GGGCAGCC----------------------------------------------------TGGAGG.................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................AGT----GGGCAGCC----------------------------------------------------TGGAGG.................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GAGCGGGCTCTGGACATC..................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AACTGCGTC----TGGAGCGGGCTCTGGACACCTATAGCTACCTGACGGATGGGGTAAGT----GGGCAGCC----------------------------------------------------TAGAGGG---TATTGG--CAATAGGTCTCTGATCTTC------G-----------------------------------AA-TTCTAATCCA----------------------------------------------------------------------------CAGCTCAATGGCTCCGTG---------ACGAGCA-TTAACGATGCGGACAGCTTCAAGCAGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
AACTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................25110.001005410000000000000
.ACTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2417.00704300000000000000
......GTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................1916.00601410000000000000
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCTT.........2014.00401300000000000000
..CTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2313.00303000000000000000
......GTC----TGGAGCGGGCTCTGGG......................................................................................................................................................................................................................................................................................................................................1913.00302100000000000000
...TGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2213.00302010000000000000
.............................CACCTATAGCTACCTGACGGATGG..............................................................................................................................................................................................................................................................................................................2412.00201010000000000000
................AGCGGGCTCTGGACACCTATAGCTACCT.......................................................................................................................................................................................................................................................................................................................2812.00200200000000000000
........C----TGGAGCGGGCTCTGGACACCT.................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
....................................................................................................................................................................................................................................................................................................................................CA-TTAACGATGCGGACAGC...........1912.00201100000000000000
AACTGCGTC----TGGAGCGGGCTCTGGG......................................................................................................................................................................................................................................................................................................................................2512.00202000000000000000
...........................GACACCTATAGCTACCTGACGGATGG..............................................................................................................................................................................................................................................................................................................2611.00100010000000000000
..CTGCGTC----TGGAGCGGGCTCTGGG......................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
...............GAGCGGGCTCTGGACACCTATA..............................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.............................CACCTATAGCTACCTGACGGATGGG.............................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................ATGCGGACAGCTTCAAGC....1811.00100100000000000000
........C----TGGAGCGGGCTCTGGACACC..................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
................................................................................................................................................................................................................................................................................................................................CGAGCA-TTAACGATGCGGACAGC...........2311.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................ATGCGGACAGCTTCAAGCAGGT2211.00101000000000000000
.................GCGGGCTCTGGACACCTATAGCTACCT.......................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................TAACGATGCGGACAGCTT.........1811.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................TAACGATGCGGACAGCTTCAAGC....2311.00101000000000000000
......................................................................................................................................................................................................................................................................................................GCTCAATGGCTCCGTG---------ACGAGC..............................2211.00100010000000000000
.....CGTC----TGGAGCGGGCTCTGGG......................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...TGCGTC----TGGAGCGGGCTCTG........................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.............................CACCTATAGCTACCTGACGGATG...............................................................................................................................................................................................................................................................................................................2311.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................GCA-TTAACGATGCGGACAGCT..........2111.00100010000000000000
....................................AGCTACCTGACGGATGG..............................................................................................................................................................................................................................................................................................................1711.00100000010000000000
.ACTGCGTC----TGGAGCGGGCTCTGGG......................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................GAGCA-TTAACGATGCGGAC..............1911.00100100000000000000
..................................ATAGCTACCTGACGGATGG..............................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.............................CACCTATAGCTACCTGACGGATGGGC............................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.ACTGCGTC----TGGAGCGGGCTCT.........................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...TGCGTC----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................GATGCGGACAGCTTCAAGCAGGT2311.00101000000000000000
droSec2
AACTGCGTC----TGGAGCGGGCTCTGGACACCTATAGCTACCTGACGGATGGGGTAAGT----GGGCAGCC----------------------------------------------------TGGAGGG---TATTGG--GAATAGGTTTCTGATCTTC------G-----------------------------------AA-TTCTAATCCA----------------------------------------------------------------------------CAGCTCAATGGCTCCGTG---------ACGAGCA-TTAACGATGCGGACAGCTTCAAGCAGGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......GTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................1916.0060060
.....CGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2015.0050050
.ACTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2415.0051220
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCTT.........2013.0030120
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCTTCAAGCAG..2713.0030030
.................................TATAGCTACCTGACGGATGG..............................................................................................................................................................................................................................................................................................................2013.0030030
..CTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2313.0030300
..................................ATAGCTACCTGACGGATGG..............................................................................................................................................................................................................................................................................................................1912.0020020
...TGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2211.0010010
AACTGCGTC----TGGAGCGGGCTCTG........................................................................................................................................................................................................................................................................................................................................2311.0010010
AACTGCGTC----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................2611.0010100
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGC...........1811.0010010
...................................................................................................................................................................................................................................................................................................................................GCA-TTAACGATGCGGACAGCTTCAA......2511.0010010
...................................................................................................................................................................................................................................................................................................................................GCA-TTAACGATGCGGACAGCTTCAAGC....2711.0010010
.................................TATAGCTACCTGACGGATG...............................................................................................................................................................................................................................................................................................................1911.0010010
...................................................................................................................................................................................................................................................................................................................................GCA-TTAACGATGCGGACAGC...........2011.0010010
................................................................................................................................................................................................................................................................................................................................CGAGCA-TTAACGATGCGG................1811.0010010
.........................................................................................................................................................................................................................................................................................................CAATGGCTCCGTG---------ACGAGC..............................1911.0011000
.............................CACCTATAGCTACCTGACGGATGGG.............................................................................................................................................................................................................................................................................................................2511.0010010
......................................................................................................................................................................................................................................................................................................GCTCAATGGCTCCGTG---------ACGAGC..............................2211.0010010
.ACTGCGTC----TGGAGCGGGCTCTGGACA....................................................................................................................................................................................................................................................................................................................................2611.0010100
..................................ATAGCTACCTGACGGATGGGC............................................................................................................................................................................................................................................................................................................2111.0010010
........................................................................................................................................................................................................................................................................................................................................TAACGATGCGGACAGCTTCAAGCAGGT2711.0010100
.....................GCTCTGGACACCTATAGCTACCTG......................................................................................................................................................................................................................................................................................................................2411.0011000
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCTTTGG......2311.0010100
....GCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2111.0010100
....................................AGCTACCTGACGGATGGG.............................................................................................................................................................................................................................................................................................................1811.0010010
.........................................................................................................................................................................................................................................................................................................CAATGGCTCCGTG---------ACGAGCA-............................2011.0011000
................................CTATAGCTACCTGACGGATGG..............................................................................................................................................................................................................................................................................................................2111.0010010
AACTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2511.0010010
..CTGCGTC----TGGAGCGGGCTCTG........................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................TAGCTACCTGACGGATGGG.............................................................................................................................................................................................................................................................................................................1911.0010010
..................................ATAGCTACCTGACGGATG...............................................................................................................................................................................................................................................................................................................1811.0010010
........................................................................................................................................................................................................................................................................................................TCAATGGCTCCGTG---------ACGAGC..............................2011.0010010
..........................................................................................................................................................................................................................................................................................................AATGGCTCCGTG---------ACGAGCA-TT..........................2111.0010010
.ACTGCGTC----TGGAGCGGGCTCTG........................................................................................................................................................................................................................................................................................................................................2211.0010010
..CTGCGTC----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................2411.0010010
........C----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................1811.0010010
.ACTGCGTC----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................2511.0010010
.....................................GCTACCTGACGGATGGGC............................................................................................................................................................................................................................................................................................................1820.5010010
droYak3
AACTGCGTC----TGGAGCGGGCTCTGGACACATATAGCTACCTCACGGACGGGGTGAGT----AGGCAGTT----------------------------------------------------TGGAGGG---GGTTTG--CCATACGTCTCTGATCCTT------A----------------------------AACCTTGAATCTTTAAACCA----------------------------------------------------------------------------CAGACCAATGGCACCGTG---------ACGAGCA-TTAACGATGCGGACAGCTTCAAGCAGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................G---------ACGAGCA-TTAACGATGCGGA...............2117.00704000030000
........C----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................1815.00503200000000
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCTT.........2013.00301000020000
.ACTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2413.00300000030000
................................ATATAGCTACCTCACGGACG...............................................................................................................................................................................................................................................................................................................2013.00303000000000
AACTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2513.00301100010000
......................................................................................................................................................................................................................................................................................................GACCAATGGCACCGTG---------ACGAGC..............................2213.00301010010000
...................................................................................................................................................................................................................................................................................................................GTG---------ACGAGCA-TTAACGATGCGGA...............2313.00302000010000
.....................................................................................................................................................................................................................................................................................................................G---------ACGAGCA-TTAACGATGCGGACAGC...........2512.00211000000000
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCTTCAAGCAGGT2912.00200000020000
..............................ACATATAGCTACCTCACGGACG...............................................................................................................................................................................................................................................................................................................2212.00202000000000
...............................CATATAGCTACCTCACGGACG...............................................................................................................................................................................................................................................................................................................2112.00202000000000
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCTTCAAGC....2512.00201000010000
..CTGCGTC----TGGAGCGGGCTCTG........................................................................................................................................................................................................................................................................................................................................2112.00200000020000
.............................CACATATAGCTACCTCACGGACGGGAC...........................................................................................................................................................................................................................................................................................................2712.00202000000000
........C----TGGAGCGGGCTCTGGACACATATAGC............................................................................................................................................................................................................................................................................................................................2712.00201000010000
...............................................................................................................................................................................................................................................................................................................CACCGTG---------ACGAGCA-TTAACGATGC..................2412.00200000020000
..................................ATAGCTACCTCACGGACG...............................................................................................................................................................................................................................................................................................................1811.00100100000000
............................ACACATATAGCTACCTCACGGACG...............................................................................................................................................................................................................................................................................................................2411.00101000000000
......................................................................................................................................................................................................................................................................................................GACCAATGGCACCGTG---------ACG.................................1911.00100000010000
.ACTGCGTC----TGGAGCGGGCTCTGGACAC...................................................................................................................................................................................................................................................................................................................................2711.00101000000000
AACTGCGTC----TGGAGCGGGCT...........................................................................................................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................TAACGATGCGGACAGCTTCAAGC....2311.00101000000000
........................................................................................................................................................................................................................................................................................................................................TAACGATGCGGACAGCTTCAAGCAGGC2711.00100100000000
...........................GACACATATAGCTACCTCAC....................................................................................................................................................................................................................................................................................................................2011.00101000000000
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCTTCAAGCAG..2711.00101000000000
......................................................................................................................................................................................................................................................................................................GACCAATGGCACCGTG---------ACGA................................2011.00101000000000
.ACTGCGTC----TGGAGCGGGCTCT.........................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.................................TATAGCTACCTCACGGACGGGA............................................................................................................................................................................................................................................................................................................2211.00100000010000
.......................TCTGGACACATATAGCTACCT.......................................................................................................................................................................................................................................................................................................................2111.00110000000000
.....................................................................................................................................................................................................................................................................................................................G---------ACGAGCA-TTAACGATGCGGAC..............2211.00100100000000
..CTGCGTC----TGGAGCGGGCTCTGGACA....................................................................................................................................................................................................................................................................................................................................2511.00101000000000
......GTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.ACTGCGTC----TGGAGCGGGCTCTG........................................................................................................................................................................................................................................................................................................................................2211.00100000010000
............................ACACATATAGCTACCTCACGGACGGGA............................................................................................................................................................................................................................................................................................................2711.00100100000000
.........................................................................................................................................................................................................................................................................................................CAATGGCACCGTG---------ACGAGC..............................1911.00100010000000
................AGCGGGCTCTGGACACATATAGCTACC........................................................................................................................................................................................................................................................................................................................2711.00101000000000
...........................GACACATATAGCTACCTCACGGACGGGA............................................................................................................................................................................................................................................................................................................2811.00101000000000
.............................CACATATAGCTACCTCACGGACG...............................................................................................................................................................................................................................................................................................................2311.00101000000000
........C----TGGAGCGGGCTCTGGACAC...................................................................................................................................................................................................................................................................................................................................2011.00101000000000
................................................................................................................................................................................................................................................................................................................ACCGTG---------ACGAGCA-TTAACGATGCGGAC..............2711.00100100000000
..CTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..................................................................................................................................................................................................................................................................................................................CGTG---------ACGAGCA-TTAACGATGC..................2111.00101000000000
......GTC----TGGAGCGGGCTCTGG.......................................................................................................................................................................................................................................................................................................................................1811.00100000010000
..............GGAGCGGGCTCTGGACAC...................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.................................TATAGCTACCTCACGGACGGG.............................................................................................................................................................................................................................................................................................................2111.00100000010000
.............................CACATATAGCTACCTCACGGA.................................................................................................................................................................................................................................................................................................................2111.00100000010000
...................................................................................................................................................................................................................................................................................................................GTG---------ACGAGCA-TTAACGATGCGGACAGCT..........2811.00100000010000
...................................................................................................................................................................................................................................................................................................................GTG---------ACGAGCA-TTAACGATGCGGAC..............2411.00101000000000
.........................................................................................................................................................................................................................................................................................................................................AACGATGCGGACAGCTTCAAGCAGGT2611.00101000000000
...........................GACACATATAGCTACCTCACGGACGG..............................................................................................................................................................................................................................................................................................................2611.00101000000000
............................ACACATATAGCTACCTCACG...................................................................................................................................................................................................................................................................................................................2011.00101000000000
.................GCGGGCTCTGGACACATATAGC............................................................................................................................................................................................................................................................................................................................2211.00101000000000
........................................................................................................................................................................................................................................................................................................................................TAACGATGCGGACAGCTTCAAGCAG..2511.00100000010000
..........................GGACACATATAGCTACCTCAC....................................................................................................................................................................................................................................................................................................................2111.00101000000000
....................................AGCTACCTCACGGACGGGAC...........................................................................................................................................................................................................................................................................................................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................AATGGCACCGTG---------ACGAGC..............................1811.00101000000000
.....................................................................................................................................................................................................................................................................................................................................A-TTAACGATGCGGACAGCTTCAAGCA...2611.00100000010000
........................CTGGACACATATAGCTACCTCACG...................................................................................................................................................................................................................................................................................................................2411.00101000000000
..............................ACATATAGCTACCTCACGGACGGGACC..........................................................................................................................................................................................................................................................................................................2711.00101000000000
......................................CTACCTCACGGACGGGACC..........................................................................................................................................................................................................................................................................................................1970.29200200000000
......................................CTACCTCACGGACGGGAC...........................................................................................................................................................................................................................................................................................................1860.17101000000000
droEre2
AACTGCGTC----TGGAGCGGGCTCTGGACACATATAGCTACCTCACGGACGGGGTGAGT----AGGCAGCC----------------------------------------------------TGGATGG---GGTGGG--CAATAGGTCTCTGATCCTC------G-----------------------------------AA-TTCTAATCCA----------------------------------------------------------------------------CAGCCCAATGGCACTGTG---------ACGAGCA-TTGACGATGCGGACAGCTTTAAGCAGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................ACTGTG---------ACGAGCA-TTGACGATGC..................2314.0041000300
.............................CACATATAGCTACCTCACGGACGG..............................................................................................................................................................................................................................................................................................................2413.0032100000
.....................................................................................................................................................................................................................................................................................................................................A-TTGACGATGCGGACAGCT..........1913.0030000300
......GTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................1913.0030000030
..................................ATAGCTACCTCACGGACGG..............................................................................................................................................................................................................................................................................................................1913.0032100000
.ACTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2413.0031000200
.............................CACATATAGCTACCTCACGGACG...............................................................................................................................................................................................................................................................................................................2312.0021000010
..........................GGACACATATAGCTACCTCACGGAC................................................................................................................................................................................................................................................................................................................2512.0021100000
................................ATATAGCTACCTCACGGACGGGC............................................................................................................................................................................................................................................................................................................2312.0021001000
..............................ACATATAGCTACCTCACGGAC................................................................................................................................................................................................................................................................................................................2112.0021000010
.....................................................................................................................................................................................................................................................................................................................................A-TTGACGATGCGGACAGCTT.........2012.0020000110
...............................CATATAGCTACCTCACGGACGG..............................................................................................................................................................................................................................................................................................................2212.0020002000
.ACTGCGTC----TGGAGCGGGCTCTGGACA....................................................................................................................................................................................................................................................................................................................................2612.0020000110
...............................CATATAGCTACCTCACGGAC................................................................................................................................................................................................................................................................................................................2012.0022000000
.....................................................................................................................................................................................................................................................................................................................G---------ACGAGCA-TTGACGATGCGGA...............2112.0020000110
................................................................................................................................................................................................................................................................................................................ACTGTG---------ACGAGCA-TTGACGATGCGGAC..............2712.0020000110
.................................................................................................................................................................................................................................................................................................................CTGTG---------ACGAGCA-TTGACGATGC..................2212.0020001100
........................................................................................................................................................................................................................................................................................................CCAATGGCACTGTG---------ACGAG...............................1912.0020101000
...............................CATATAGCTACCTCACGGACG...............................................................................................................................................................................................................................................................................................................2112.0020000020
................................................................................................................................................................................................................................................................................................................ACTGTG---------ACGAGCA-TTGACGATGCGGA...............2612.0021000100
....................................AGCTACCTCACGGACGGG.............................................................................................................................................................................................................................................................................................................1812.0020000200
........C----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................1812.0022000000
.......................................................................................................................................................................................................................................................................................................CCCAATGGCACTGTG---------ACGAGC..............................2112.0020010100
...................................................................................................................................................................................................................................................................................................................GTG---------ACGAGCA-TTGACGATGC..................2012.0020001100
AACTGCGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2511.0010000100
........C----TGGAGCGGGCTCTGGACA....................................................................................................................................................................................................................................................................................................................................1911.0011000000
........................CTGGACACATATAGCTACCTCAC....................................................................................................................................................................................................................................................................................................................2311.0010100000
...................................................................................................................................................................................................................................................................................................................................GCA-TTGACGATGCGGACAGCTTTA.......2411.0010000100
...........................GACACATATAGCTACCTCACGGAC................................................................................................................................................................................................................................................................................................................2411.0010100000
..............................................................................................................................................................................................................................................................................................................GCACTGTG---------ACGAGCA-TTGACGATGC..................2511.0010000010
...............................CATATAGCTACCTCACGGACGGGCCC..........................................................................................................................................................................................................................................................................................................2611.0011000000
................AGCGGGCTCTGGACACATATAGC............................................................................................................................................................................................................................................................................................................................2311.0010100000
.................................................................................................................................................................................................................................................................................................................CTGTG---------ACGAGCA-TTGACGATGCG.................2311.0010000100
........................................................................................................................................................................................................................................................................................................CCAATGGCACTGTG---------ACGAGC..............................2011.0010000010
.........................................................................................................................................................................................................................................................................................................................................GACGATGCGGACAGCTTTAA......2011.0010000010
..CTGCGTC----TGGAGCGGGCTCTGGACA....................................................................................................................................................................................................................................................................................................................................2511.0010001000
................................................................................................................................................................................................................................................................................................................ACTGTG---------ACGAGCA-TTGACGATGCG.................2411.0010000100
.................................TATAGCTACCTCACGGACG...............................................................................................................................................................................................................................................................................................................1911.0010001000
...........................GACACATATAGCTACCTCACGGACGG..............................................................................................................................................................................................................................................................................................................2611.0011000000
..............................................................................................................................................................................................................................................................................................................................................TGCGGACAGCTTTAAGCAG..1911.0011000000
.............................CACATATAGCTACCTCACGGACGGG.............................................................................................................................................................................................................................................................................................................2511.0010000100
..........................................................................................................................................................................................................................................................................................................AATGGCACTGTG---------ACGAGCA-TTGA........................2311.0010000100
.....CGTC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................2011.0010000100
...................................................................................................................................................................................................................................................................................................................GTG---------ACGAGCA-TTGACGATGCGGAC..............2411.0011000000
................................ATATAGCTACCTCACGGACGGGCC...........................................................................................................................................................................................................................................................................................................2411.0010100000
.....................................................................................................................................................................................................................................................................................................................................A-TTGACGATGCGGACAGCTTTAAGC....2511.0010000100
.......................................................................................................................................................................................................................................................................................................CCCAATGGCACTGTG---------ACG.................................1811.0011000000
.....................................................................................................................................................................................................................................................................................................................................A-TTGACGATGCGGACAGCTTTAAGCA...2611.0010000100
.................................................................................................................................................................................................................................................................................................................CTGTG---------ACGAGCA-TTGACGAT....................2011.0011000000
...........................GACACATATAGCTACCTCACGGACGGGC............................................................................................................................................................................................................................................................................................................2811.0011000000
.................................................................................................................................................................................................................................................................................................................CTGTG---------ACGAGCA-TTGACGATGCGGA...............2511.0011000000
................................ATATAGCTACCTCACGGAC................................................................................................................................................................................................................................................................................................................1911.0010001000
........................CTGGACACATATAGCTACCTCACG...................................................................................................................................................................................................................................................................................................................2411.0011000000
...................................................................................................................................................................................................................................................................................................................GTG---------ACGAGCA-TTGACGATGCGGA...............2311.0010000100
...................................................................................................................................................................................................................................................................................................................................GCA-TTGACGATGCGGACAGCTTTAAGC....2711.0011000000
.................................TATAGCTACCTCACGGACGGG.............................................................................................................................................................................................................................................................................................................2111.0010000100
.............................................................................................................................................................................................................................................................................................................GGCACTGTG---------ACGAGCA-TTGACGATGC..................2611.0011000000
................................................................AGGCAGCC----------------------------------------------------TGGATGG---GGTGG........................................................................................................................................................................................................................2011.0010000010
.....................................................................................................................................................................................................................................................................................................................................A-TTGACGATGCGGACAGCTTTAAGCAG..2711.0010000100
......................................................................................................................................................................................................................................................................................................GCCCAATGGCACTGTG---------ACGA................................2011.0011000000
...............................CATATAGCTACCTCACGGACGGGC............................................................................................................................................................................................................................................................................................................2411.0010000100
...TGCGTC----TGGAGCGGGCTCTGG.......................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................ACATATAGCTACCTCACGGACG...............................................................................................................................................................................................................................................................................................................2211.0011000000
.......................................................................................................................................................................................................................................................................................................CCCAATGGCACTGTG---------ACGAGCA-T...........................2311.0010000100
.............................CACATATAGCTACCTCACGGAC................................................................................................................................................................................................................................................................................................................2211.0011000000
..................................................................................................................................................................................................................................................................................................................TGTG---------ACGAGCA-TTGACGATGCG.................2211.0010000100
.....................................................................................................................................................................................................................................................................................................................G---------ACGAGCA-TTGACGATGCGGACAG............2411.0010100000
AACTGCGTC----TGGAGCGGGCT...........................................................................................................................................................................................................................................................................................................................................2011.0010000010
................................................................................................................................................................................................................................................................................................................ACTGTG---------ACGAGCA-TTGACGAT....................2111.0010010000
.................GCGGGCTCTGGACACATATAGCT...........................................................................................................................................................................................................................................................................................................................2311.0010001000
...................................TAGCTACCTCACGGACGGG.............................................................................................................................................................................................................................................................................................................1911.0010000010
...TGCGTC----TGGAGCGGGCTCTGGAC.....................................................................................................................................................................................................................................................................................................................................2311.0010100000
...................GGGCTCTGGACACATATAGCTACCT.......................................................................................................................................................................................................................................................................................................................2511.0011000000
.............................................................................................................................................................................................................................................................................................................GGCACTGTG---------ACGAGCA-TTGA........................2011.0011000000
....................................................................................................................................................................................................................................................................................................................................CA-TTGACGATGCGGACAGCTTTAAGC....2611.0010000010
..........................................................................................................................................................................................................................................................................................................AATGGCACTGTG---------ACGAGCA-TTGACGA.....................2611.0010100000
.....................GCTCTGGACACATATAGCTACCTCACG...................................................................................................................................................................................................................................................................................................................2711.0010100000
.......TC----TGGAGCGGGCTCTGGA......................................................................................................................................................................................................................................................................................................................................1820.5011000000

Generated: 05/16/2015 at 07:49 PM