ID:

dvi_18990

 Coordinate:

scaffold_13049:8453836-8453986 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_12144:9]; CDS [Dvir\GJ12156-cds]; intron [Dvir\GJ12156-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAATCCAATTCGAAACGAAACGAACCGAACCGATCGGTGCCATCCACTCACTTGCTCGCTCGCACGATCGTCGCGCCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGAATTCTATTCGGAATATCTAATTAACATTGCATTCCCTTCCATGTCATATCTTCCCACTACCATGGATCGCTTGCGGCCGTGCAGGGTGGTCGTTCAGGCGGATGGACAACTGCGCACGGGCTTCGATGTGGTTG
**************************************************............(((((........((((((..(((.(((((..(((.............((((.(((........(((((...((((....)))).))))).))).)))).............))).))))).))).)))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 M028
head
 SRR060664
9_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 V047
embryo
 M027
male body		 SRR060658
140_ovaries_total
 SRR060665
9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060678
9x140_testes_total
 SRR060683
160_testes_total
 SRR060688
160_ovaries_total
 V053
head
................................................................................................................................................................................................................GTTCAGGCGGATGGACAA......................... 18 0 1 2.00 2 0 0 0 0 0 0 0 0 1 0 1 0 0 0
............................................................................................................................................................................................................................GGACAACTGCGCACGGGCTT........... 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTGCGCACGGGCTTCGATGTG.... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GATGGACAACTGCGCACGGGCTT........... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CAAGGGTGGTCGTTCAGGCGGAT............................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GGACAACTGCGCACGGGCTTCG......... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GTTCAGGCGGATGGACAAC........................ 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................CAAGGGTGGTCGTTCAGGCGGATGGAC........................... 27 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GTGGTCGTTCAGGCGGATGGA............................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GACAACTGCGCACGGGCTTC.......... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................CTGCGCACCGGCTTCGAGGTG.... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TCAGGCGGATGGACAACTG...................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GATGGACAACTGCGCACGGGC............. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GCGGATGGACAACTGCGCACG................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................GTTCAGGCGGATGGACAACTGC..................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CAGGCGGATGGACAACTGC..................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CACGGGCTTCGATGTGGT.. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GGTTGTTCAGGCGGATGGACA.......................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGGCGGATGGACAACTGCG.................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................................CTGCGCACGGGCTTCGATGT..... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CAACTGCGCACGGGCTTC.......... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGGGTAATCGTTCAGGCGGC................................ 20 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................................................................GGGGGGGTCGTTAAGGCGG................................. 19 3 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGTTAGGTTAAGCTTTGCTTTGCTTGGCTTGGCTAGCCACGGTAGGTGAGTGAACGAGCGAGCGTGCTAGCAGCGCGGCGCGACACGAGGTAAGCATTAAAGAAGAGTAATGTAACTTAAGATAAGCCTTATAGATTAATTGTAACGTAAGGGAAGGTACAGTATAGAAGGGTGATGGTACCTAGCGAACGCCGGCACGTCCCACCAGCAAGTCCGCCTACCTGTTGACGCGTGCCCGAAGCTACACCAAC
**************************************************............(((((........((((((..(((.(((((..(((.............((((.(((........(((((...((((....)))).))))).))).)))).............))).))))).))).)))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 V053
head
 M047
female body
 M027
male body		 M028
head
 V116
male body		 SRR060669
160x9_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR1106729
mixed whole adult body
..........................................................................................................GTAATGTAACTTAAGATAAGCCTT......................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................GCGCGACACGAGGTAAGCATT......................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGGGGGAGGGTACCTAGCTA............................................................... 20 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0
......................................................................................GAGGTAAGAATTAAAGTAGGGT............................................................................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CCAGCTAGTCCGCCCACTTG........................... 20 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0
......................................................CGAGCGCGGCTGCTAGCAGC................................................................................................................................................................................. 20 3 5 0.40 2 0 0 0 1 1 0 0 0 0 0
......................................................................................GAGGTATGAATTAAAGTAGAGT............................................................................................................................................... 22 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
........................................................AGTGAGCTTGCTAGCAGCC................................................................................................................................................................................ 19 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................TTATTTGTAACGTTCGGGAAG............................................................................................... 21 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0
......................................................................................GAGGTAAGAATAAAAGTAGAGT............................................................................................................................................... 22 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................ATGTAACTGCAGATAACCCT.......................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0
..........................................................TGAGCGTGCTAGCAGCCTG.............................................................................................................................................................................. 19 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................CGACCGCCGGCACGT................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................GCGCGACCCACAAGCAAG....................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0
...TGGGTTAACCTTTGTTTTGC.................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:8453786-8454036 - dvi_18990 CCAATCCAATTCGAAACGAAACGAAC----CGAACCGATCGGTG-CCA------TCCACTCACTTGCTCGCTCG------------------------CACGATCGTCGCGCCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGAATTCTATTCGGAA-T--ATC---T-----AATTAACATTGCATTCCCTTCCATGTCATATCTTCCCA---CT-AC-CA------TGGATC--GC----------T------------------------------TG-----------------------------C--------------------------------------G-GC---CGT-------------------GCAGGGTGGTCGTTCAGGCGGATGGACAACTGCGCACGGGCTTCGATGTGGTTG
droMoj3 scaffold_6680:12101254-12101502 - CCAAACCGAACCGAACCG-----AACCGAACCA-TCGATCGGTG-TCA------TCTACTCACTTGCTCGCTCG------------------------CACGATCGTCGCGCCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTAATCTCGAT-----T-TTGAGTATCC-----AATTAACATTGCATTCCTTTCTATGTCATATCTTCCTA---CT-CC-CA------TGGATC--GC----------T------------------------------TG-------------------------TGGAT----------------------------------------------GT-------------------GCAGGGTCGTCGTTCAGGCTGATGGTCAGCTGCGCACGGGCTTCGATGTGGTTG
droGri2 scaffold_15110:7478450-7478717 - CCGAACCAAACCGAATTGAACCGCATTGAAC----CGATCGGTGTCCATCC----TTGCTCACTTGCTCGCTCGCTCG--------------------CACGATCGTCGCGCCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACTTTGATCCGCTT-----G-TTGAATCCTT-----GGTTAACATTGCATTCCTTTTTATGTCATATCTTCCTA---CT-CC-T--CCACCTCAACCTGGG-----------------AT----------------------CG-----------------------TTGGCAT--------------------------------------C-AA-------------------------TCAGAGTGGTCGTTCAGGCGGATGGACAACTACGCACGGGTTTCGATGTCGTCG
droWil2 scf2_1100000004729:2384188-2384431 + AT---------------------------------CGGTCGATC-CT-------GTCGCTCACTTGCTCACTCG------------------------CACGAACGTCGCGCCGCGCTGTGCTCCATTCGTAATTTCTCCTCATTACTTTAATTGAGTT-----T-AAGAATATCGTTTTATGCTAACATTGCCCTCCTTTCTATGTC------TCCCG---CTTCT-CAA----CTGGTTTTGGA-----------------TT---------------------------------------------------------------------------------------GT---G-CTC---CTCTCCTCCGTCCATCTTTAAACAGGGTGGTTGTTCAAGCCGATGGTCAGTTGCGTACTGGCTTCGATGTGGTGG
dp5 XR_group8:713799-714069 - C--------------------------------------------------------ACTCACTCACTCACTCGTTCGCTCAATCGCTCACTTCGTGTCACGATC-----GTCGCTGTGTGCTCCATTCGTAATTTCTTCTCATTAAATTAAAACTTGCGCT--G-TTTTGT---T-----TGCTAACATTGCGTTCCTTTTTATGTCGTGTCTTCCC--TACT-CTCAAACGGTCTGG-TCTGGA-CTCCT--TCCTGTG-------AT---CCTTCTGCTGTTGCTGC----------------------------------------TGCTGCT--------------------G-CTCCTTCT-------------------GCAGTGTGATTGTCCAAGCGGATGGACAGCTGCGCACAGGCTTTGATGTGGTCG
droPer2 scaffold_32:769301-769571 + C--------------------------------------------------------ACTCACTCACTCACTCGTTCGCTCAATCGCTCACTTCGTGTCACGATC-----GTCGCTGTGTGCTCCATTCGTAATTTCTTCTCATTAAATTAAAACTTGCGCT--G-TTTTGT---T-----TGCTAACATTGCGTTCCTTTTTATGTCGTGTCTTCCC--TACT-CTCAAACGGTCTGG-TCTGGA-CTCCT--TCCTGTG-------AT---CCTTCTGCTGTTGCTGC----------------------------------------TGCTGCT--------------------G-CTCCTTCT-------------------GCAGTGTGATTGTCCAAGCGGATGGACAGCTGCGCACAGGCTTTGATGTGGTCG
droAna3 scaffold_13337:13823305-13823570 + ------------------------------------------------------TCCACTCACTCGCTCACTCGA----------------------TCACGATC--CACGTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTTATTTTTGCTCCAAG-TTGGGG---T-----TGCTAACGTTGCCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AATCGGTCTGGATCTGGA-----------------TC----------------------TGCTTCCGGTTCTGTCTGGGATTGGTCTGGCTGCCCTTGTTGATT-------C--------------------------------CC---CATCTTC-ACCAGAGTGATTGTCCAAGCCGATGGCCAGCTGCGTACAGGATTCGATGTGGTGG
droBip1 scf7180000395832:764620-764888 + ------------------------------------------------------TCCACTCACTCGCTCACTCGA----------------------TCACGATC--CACGTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTAATTTTTGCTCCAAG-TTGGGT---T-----TGCTAACGTTGCCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AATCGGTCTGGACCTGGA-----------------TC----------------------TGCCACTGCTTCTGGTCGGGATTGGTCTGGATTTCCTATTTGATT-------C--------------------------------CCCTTCATCTTT-ACCAGAGTGATTGTTCAAGCCGATGGACAGCTGCGTACAGGATTCGATGTGGTGG
droKik1 scf7180000302486:597934-598224 - CC-----ACATCCCAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTTGCTCACTCGA----------------------TCACGTTC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGAACCTTCGGCGGGTCTTGAGT---T-----AGCTAACATTGCCTTCCTTTCTATGTCGTGTCTTCCCCCCACT-CTTAAACGGTCTGGATTTGA------------------------------------TGATGATGA----------------------------------------TGACGATGCTTCCTCCTGGATGGTTCTCCCCGCTCCT-------------------TTAGTGTGATTGTACAAGCCGATGGACAGCTGCGCACAGGATTCGATGTAGTGG
droFic1 scf7180000453839:2179036-2179335 - CCAGTCTAAATCCAAACT---CCCGT----CCACTCGCTCTACT-CCACTCCACTCCACTCAATCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCCTCAATCGGGA-TTGAGT---T-----TGCTAACATTGCCTTCCTTTCTATGTCGTGTCTTCCC--CACT-CT-AAACGGTCTGGAACTGGC----------TTCTGGATTTGGATATGCCATTTGCT------------------------------ATTGGAT------------C--------------------ATCCTC-CTCCTTCA-------------------ACAGTGTGATTGTACAAGCCGATGGACAGCTGCGCACTGGATTCGATGTGGTGG
droEle1 scf7180000491255:3212665-3212941 - CCAGTCCAAATTCAAACT---CCAGT----CCACTCGCTCTACT-CCACTCCACTCCACTCACTCGCTCACTCGA----------------------TCACGTTC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCCTTTCGCGGGG-TTGAGC---T-----TGCTAACGTTGCCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AAACGGTCTGGATCTGGAAC-----------TGGCTTTGGGTT----------------TG--------------------------CGAT--------------------------------------G-ATC---CT-------------------CCAGTGTGATTGTACAAGCCGATGGACAGCTGCGCACAGGATTCGACGTGGTGG
droRho1 scf7180000778301:82747-83009 - CCAGTCCAAATCCAAACT---CCAGT----CCACTAGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCCTTCCACGGAG-TTGAGC---T-----TGCTAACGTTGCCTTCCTTTTTATGTCGTGTCTTCCCA---CT-CT-AAACGGTCTGGATCTGGA-----------------TT----------------------TG-----------------------GTGCGAT--------------------------------------G-GT---CCT-------------------ACAGAGTGATCGTACAAGCCGATGGACAGCTGCGTACAGGATTCGACGTGGTGG
droBia1 scf7180000302428:3327338-3327607 + CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCAATCGCTCACTCGA----------------------TCACGACC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCCTAACCTGGGG-TTGAGT---T-----AGCTAACATTGCCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AAACGGTCTGGATCTGGA-----------------CG---------------------ATG-----------------------CTTGGAC---------------G-----------------GT---G-CTCCTCCT-------------------CCAGTGTGATTGTGCAAGCCGATGGGCAGCTGCGCACGGGATTCGATGTGGTGG
droTak1 scf7180000415352:582843-583112 + CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCAATCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCCTAACTGGGGG-TTGAGT---T-----TGCTAACGTTGCCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AAACGGTCTGGAACTGGAACTCCTAATCATC----------------------------TG-----------------------C----A------------------------------------------TCCTCCT-------------------CTAGAGTGATTGTACAAGCCGATGGACAGCTGCGCACAGGATTCGATGTGGTGG
droEug1 scf7180000409711:555057-555322 + CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCATTGCATGGAG-TTGAGT---T-----TGCTAACATTACCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AAACGGTCTGGATCCGGA-----------------TA----------------------TG-----------------------CTTTGGT--------------------------------------G-TACCTCCT-------------------TTAGTGTGATTGTGCAAGCCGATGGACAGCTGCGTACAGGATTCGACGTAGTGG
dm3 chr3L:16784741-16785007 - CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGTTC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATTCTTACCCGGGG-CTGAAT---T-----TGCTAACATTGCCTTCCTTTTTATGTCGTGTCTTCCCA---CT-AT-AAACGGTCTGGATCTGGA-----------------TT---------------------TTG-----------------------TTTGGAT--------------------------------------G-AACCTTCC-------------------GCAGTGTGATTGTTCAGGCTGATGGACAGCTCCGCACAGGATTCGATGTGGTTG
droSim2 3l:16375378-16375643 - dsi_11738 CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGTTC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATTCCTACCCGGGG-CTGAAT---T-----TGCTAACATTGCCTTCCTTTTTATGTCGTGTCTTCCCA---CT-AT-AAACGGTCTGGATCTGGA-----------------TT----------------------TG-----------------------TTTGGAT--------------------------------------G-AACCTTCC-------------------GCAGTGTGATTGTTCAGGCCGATGGACAGCTCCGCACAGGATTCGATGTGGTGG
droSec2 scaffold_0:8856095-8856360 - TCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGTTC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATTCCTACCCGGGG-CTGAAT---T-----TGCTAACATTGCCTTCCTTTTTATGTCGTGTCTTCCCA---CT-AT-AAACGGTCTGGATCTGGA-----------------TT----------------------TG-----------------------TTTGGAT--------------------------------------G-AACCTTCC-------------------GCAGTGTGATTGTTCAGGCCGATGGACAGCTCCGCACAGGATTCGATGTTGTGG
droYak3 3L:17283319-17283584 + CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATTCCTACCCGGGG-TTGAAT---T-----TGCTAACGTTGCCTTCCTTTTTATGTCGTGTCTTCCCA---CT-AT-TAACGGTCTGGATCTGGA-----------------TT----------------------TG-----------------------TTTGGAT--------------------------------------G-AACCTCCT-------------------CTAGTGTGATTGTTCAGGCCGATGGACAGCTCCGCACAGGATTCGATGTGGTGG
droEre2 scaffold_4784:17048937-17049202 + CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATTCTCAGCCGGGG-TTGAAT---T-----TGCTAACGTTGCCTTCCTTTTTATGTCCTGTCTTCCCA---CT-AT-TAACGGTCTGGATCTGGA-----------------TT----------------------TG-----------------------TTTGGAC--------------------------------------G-AACCTTCT-------------------TTAGTGTGATTGTCCAGGCTGATGGACAGCTCCGCACAGGATTCGATGTGGTGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CCAATCCAATTCGAAACGAAACGAAC----CGAACCGATCGGTG-CCA------TCCACTCACTTGCTCGCTCG------------------------CACGATCGTCGCGCCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGAATTCTATTCGGAA-T--ATC---T-----AATTAACATTGCATTCCCTTCCATGTCATATCTTCCCA---CT-AC-CA------TGGATC--GC----------T------------------------------TG-----------------------------C--------------------------------------G-GC---CGT-------------------GCAGGGTGGTCGTTCAGGCGGATGGACAACTGCGCACGGGCTTCGATGTGGTTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGGCGGATGGACAA.........................1812.002000000000000000100000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGACAACTGCGCACGGGCTT...........2012.002020000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGCACGGGCTTCGATGTG....2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAACTGCGCACGGGCTT...........2311.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGACAACTGCGCACGGGCTTCG.........2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGGCGGATGGACAAC........................1911.001000000001000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGGTCGTTCAGGCGGATGGA............................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GACAACTGCGCACGGGCTTC..........2011.001000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCGGATGGACAACTG......................1911.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAACTGCGCACGGGC.............2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCGGATGGACAACTGCGCACG................2111.001000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGGCGGATGGACAACTGC.....................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGGATGGACAACTGC.....................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGGCTTCGATGTGGT..1811.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGGATGGACAACTGCG....................1911.001000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGCACGGGCTTCGATGT.....2011.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGCGCACGGGCTTC..........1811.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
CCAAACCGAACCGAACCG-----AACCGAACCA-TCGATCGGTG-TCA------TCTACTCACTTGCTCGCTCG------------------------CACGATCGTCGCGCCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTAATCTCGAT-----T-TTGAGTATCC-----AATTAACATTGCATTCCTTTCTATGTCATATCTTCCTA---CT-CC-CA------TGGATC--GC----------T------------------------------TG-------------------------TGGAT----------------------------------------------GT-------------------GCAGGGTCGTCGTTCAGGCTGATGGTCAGCTGCGCACGGGCTTCGATGTGGTTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGGGCTTCGATGTGGT..1911.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTCGTTCAGGCTGATGGTC...........................2311.001000001
...........................GAACCA-TCGATCGGTG-TCA------TCTACTCACT........................................................................................................................................................................................................................................................................................................................................................................................2911.001000001
.......GAACCGAACCG-----AACCGAACCA-TCGATC................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTCAGCTGCGCACGGGCTTC..........2311.001100000
.CAAACCGAACCGAACCG-----AACCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................2350.201001000
..AAACCGAACCGAACCG-----AACC.............................................................................................................................................................................................................................................................................................................................................................................................................................2070.141100000
...AACCGAACCGAACCG-----AACCGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................22100.101100000
...AACCGAACCGAACCG-----AACCG............................................................................................................................................................................................................................................................................................................................................................................................................................20120.081100000
droGri2
CCGAACCAAACCGAATTGAACCGCATTGAAC----CGATCGGTGTCCATCC----TTGCTCACTTGCTCGCTCGCTCG--------------------CACGATCGTCGCGCCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACTTTGATCCGCTT-----G-TTGAATCCTT-----GGTTAACATTGCATTCCTTTTTATGTCATATCTTCCTA---CT-CC-T--CCACCTCAACCTGGG-----------------AT----------------------CG-----------------------TTGGCAT--------------------------------------C-AA-------------------------TCAGAGTGGTCGTTCAGGCGGATGGACAACTACGCACGGGTTTCGATGTCGTCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................GACAACTACGCACGGGTTTCGATG......2411.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGATGGACAACTACGCACGGGTTTC..........2811.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................GTCGTTCAGGCGGATGGACAACT.......................2311.00110
droWil2
AT---------------------------------CGGTCGATC-CT-------GTCGCTCACTTGCTCACTCG------------------------CACGAACGTCGCGCCGCGCTGTGCTCCATTCGTAATTTCTCCTCATTACTTTAATTGAGTT-----T-AAGAATATCGTTTTATGCTAACATTGCCCTCCTTTCTATGTC------TCCCG---CTTCT-CAA----CTGGTTTTGGA-----------------TT---------------------------------------------------------------------------------------GT---G-CTC---CTCTCCTCCGTCCATCTTTAAACAGGGTGGTTGTTCAAGCCGATGGTCAGTTGCGTACTGGCTTCGATGTGGTGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGTACTGGCTTCGATGTGGT..2312.00200110
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTCAAGCCGATGGTCAGTTGCGTACTG...............2812.00210100
.........................................................................................................................................................................................................................................................................................................................................................................................CATCTTTAAACAGGGTGGT............................................1911.00100100
........................................................................CG------------------------CACGAACGTCGCGCCGCGC...................................................................................................................................................................................................................................................................................................................................2111.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTCAAGCCGATGGTCAGT........................1911.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTCAAGCCGATGGTCAGTTGCGTA..................2511.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGTACTGGCTTCGATGTGG...2311.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCCGATGGTCAGTTGCGTA..................1911.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGTACTGGCTTCGATGTGGT..2411.00100100
dp5
C--------------------------------------------------------ACTCACTCACTCACTCGTTCGCTCAATCGCTCACTTCGTGTCACGATC-----GTCGCTGTGTGCTCCATTCGTAATTTCTTCTCATTAAATTAAAACTTGCGCT--G-TTTTGT---T-----TGCTAACATTGCGTTCCTTTTTATGTCGTGTCTTCCC--TACT-CTCAAACGGTCTGG-TCTGGA-CTCCT--TCCTGTG-------AT---CCTTCTGCTGTTGCTGC----------------------------------------TGCTGCT--------------------G-CTCCTTCT-------------------GCAGTGTGATTGTCCAAGCGGATGGACAGCTGCGCACAGGCTTTGATGTGGTCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACAGCTGCGCACAGGC.............2012.0020000000002
.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGCGGATGGACAGCTGC.....................2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGCGGATGGACAGCTGCGCAC.................2611.0010100000000
...........................................................................TCGCTCAATCGCTCACTTCGTG.......................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GTGTGATTGTCCAAGCGGATGGAC...........................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACAGCTGCGCACAGGCT............2111.0010000000001
................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCGGATGGACAGCTGC.....................1911.0010000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGCGGATGGACAGCTG......................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGCACAGGCTTTGATGTGGT..2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCGGATGGACAGCTGCGC...................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GATTGTCCAAGCGGATGGA............................1911.0010100000000
........................................................................................................................................................................................................................................................TCCT--TCCTGTG-------AT---CCTTCTGCT..............................................................................................................................................................2211.0010010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGACAGCTGCGCACAGGCTTT..........2111.0010100000000
...................................................................................................ACGATC-----GTCGCTGTGTGCTCCAT.........................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGCGGATGGACAGCTGCGCACA................2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTGTCCAAGCGGATGGACAGCTGCG....................2611.0010100000000
droPer2
C--------------------------------------------------------ACTCACTCACTCACTCGTTCGCTCAATCGCTCACTTCGTGTCACGATC-----GTCGCTGTGTGCTCCATTCGTAATTTCTTCTCATTAAATTAAAACTTGCGCT--G-TTTTGT---T-----TGCTAACATTGCGTTCCTTTTTATGTCGTGTCTTCCC--TACT-CTCAAACGGTCTGG-TCTGGA-CTCCT--TCCTGTG-------AT---CCTTCTGCTGTTGCTGC----------------------------------------TGCTGCT--------------------G-CTCCTTCT-------------------GCAGTGTGATTGTCCAAGCGGATGGACAGCTGCGCACAGGCTTTGATGTGGTCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................CACGATC-----GTCGCTGTGTG...............................................................................................................................................................................................................................................................................................................................1811.001010000
droAna3
------------------------------------------------------TCCACTCACTCGCTCACTCGA----------------------TCACGATC--CACGTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTTATTTTTGCTCCAAG-TTGGGG---T-----TGCTAACGTTGCCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AATCGGTCTGGATCTGGA-----------------TC----------------------TGCTTCCGGTTCTGTCTGGGATTGGTCTGGCTGCCCTTGTTGATT-------C--------------------------------CC---CATCTTC-ACCAGAGTGATTGTCCAAGCCGATGGCCAGCTGCGTACAGGATTCGATGTGGTGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGGATTCGATGTGGT..1916.006000033
..................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGATGGCCAGCTGCGTACC................2212.002000002
...................................................................................................................................................................................................................................................................................................................................................................................................................GCCGATGGCCAGCTGCGTACA................2112.002000002
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGTCCAAGCCGATGGCCAGC........................2511.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCCAGCTGCGTACAGGA.............2111.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGATGGCCAGCTGCGTACA................2211.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGCCGATGGCCAGCTGC.....................2211.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTACAGGATTCGATGTGGT..2111.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGCCGATGGCCAGCTGCGTA..................2511.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................GAGTGATTGTCCAAGCCGATGGCCAGCT.......................2811.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCCGATGGCCAGCTGC.....................1911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCCAGCTGCGTACA................1811.001000001
droBip1
------------------------------------------------------TCCACTCACTCGCTCACTCGA----------------------TCACGATC--CACGTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTAATTTTTGCTCCAAG-TTGGGT---T-----TGCTAACGTTGCCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AATCGGTCTGGACCTGGA-----------------TC----------------------TGCCACTGCTTCTGGTCGGGATTGGTCTGGATTTCCTATTTGATT-------C--------------------------------CCCTTCATCTTT-ACCAGAGTGATTGTTCAAGCCGATGGACAGCTGCGTACAGGATTCGATGTGGTGGSizeHit CountTotal NormTotal
No Reads
droKik1
CC-----ACATCCCAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTTGCTCACTCGA----------------------TCACGTTC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGAACCTTCGGCGGGTCTTGAGT---T-----AGCTAACATTGCCTTCCTTTCTATGTCGTGTCTTCCCCCCACT-CTTAAACGGTCTGGATTTGA------------------------------------TGATGATGA----------------------------------------TGACGATGCTTCCTCCTGGATGGTTCTCCCCGCTCCT-------------------TTAGTGTGATTGTACAAGCCGATGGACAGCTGCGCACAGGATTCGATGTAGTGGSizeHit CountTotal NormTotal
No Reads
droFic1
CCAGTCTAAATCCAAACT---CCCGT----CCACTCGCTCTACT-CCACTCCACTCCACTCAATCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCCTCAATCGGGA-TTGAGT---T-----TGCTAACATTGCCTTCCTTTCTATGTCGTGTCTTCCC--CACT-CT-AAACGGTCTGGAACTGGC----------TTCTGGATTTGGATATGCCATTTGCT------------------------------ATTGGAT------------C--------------------ATCCTC-CTCCTTCA-------------------ACAGTGTGATTGTACAAGCCGATGGACAGCTGCGCACTGGATTCGATGTGGTGGSizeHit CountTotal NormTotal
No Reads
droEle1
CCAGTCCAAATTCAAACT---CCAGT----CCACTCGCTCTACT-CCACTCCACTCCACTCACTCGCTCACTCGA----------------------TCACGTTC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCCTTTCGCGGGG-TTGAGC---T-----TGCTAACGTTGCCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AAACGGTCTGGATCTGGAAC-----------TGGCTTTGGGTT----------------TG--------------------------CGAT--------------------------------------G-ATC---CT-------------------CCAGTGTGATTGTACAAGCCGATGGACAGCTGCGCACAGGATTCGACGTGGTGGSizeHit CountTotal NormTotal
No Reads
droRho1
CCAGTCCAAATCCAAACT---CCAGT----CCACTAGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCCTTCCACGGAG-TTGAGC---T-----TGCTAACGTTGCCTTCCTTTTTATGTCGTGTCTTCCCA---CT-CT-AAACGGTCTGGATCTGGA-----------------TT----------------------TG-----------------------GTGCGAT--------------------------------------G-GT---CCT-------------------ACAGAGTGATCGTACAAGCCGATGGACAGCTGCGTACAGGATTCGACGTGGTGGSizeHit CountTotal NormTotal
No Reads
droBia1
CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCAATCGCTCACTCGA----------------------TCACGACC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCCTAACCTGGGG-TTGAGT---T-----AGCTAACATTGCCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AAACGGTCTGGATCTGGA-----------------CG---------------------ATG-----------------------CTTGGAC---------------G-----------------GT---G-CTCCTCCT-------------------CCAGTGTGATTGTGCAAGCCGATGGGCAGCTGCGCACGGGATTCGATGTGGTGGSizeHit CountTotal NormTotal
No Reads
droTak1
CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCAATCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCCTAACTGGGGG-TTGAGT---T-----TGCTAACGTTGCCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AAACGGTCTGGAACTGGAACTCCTAATCATC----------------------------TG-----------------------C----A------------------------------------------TCCTCCT-------------------CTAGAGTGATTGTACAAGCCGATGGACAGCTGCGCACAGGATTCGATGTGGTGGSizeHit CountTotal NormTotal
No Reads
droEug1
CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATCATTGCATGGAG-TTGAGT---T-----TGCTAACATTACCTTCCTTTCTATGTCGTGTCTTCCCA---CT-CT-AAACGGTCTGGATCCGGA-----------------TA----------------------TG-----------------------CTTTGGT--------------------------------------G-TACCTCCT-------------------TTAGTGTGATTGTGCAAGCCGATGGACAGCTGCGTACAGGATTCGACGTAGTGGSizeHit CountTotal NormTotal
No Reads
dm3
CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGTTC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATTCTTACCCGGGG-CTGAAT---T-----TGCTAACATTGCCTTCCTTTTTATGTCGTGTCTTCCCA---CT-AT-AAACGGTCTGGATCTGGA-----------------TT---------------------TTG-----------------------TTTGGAT--------------------------------------G-AACCTTCC-------------------GCAGTGTGATTGTTCAGGCTGATGGACAGCTCCGCACAGGATTCGATGTGGTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................AT--------------------------------------G-AACCTTCC-------------------GCAGTGTGAT............................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TCGA----------------------TCACGTTC-----GTCGCGCTGTGC..............................................................................................................................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTCCGCACAGGATTCGAT.......2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGCACAGGATTCGATGTGGTTG2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAGCTCCGCACAGGATTCGA........2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAGCTCCGCACAGGATTCGAT.......2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTCCGCACAGGATTCGATGTGGT..2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCTCCGCACAGGA.............1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TCGA----------------------TCACGTTC-----GTCGCGCTGTGCT.............................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAGCTCCGCACAGG..............2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCTTCCTTTTTATGTCGTGTC...................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTCCGCACAGGATTCGAT.......2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................CTTACCCGGGG-CTGAAT---.........................................................................................................................................................................................................................................................................1713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
.....................................................................................................................................................................................................................................................A-----------------TT---------------------TTG-----------------------TTTGGAT--------------------------------------G-AACCTTC..........................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TCCACTCACTCGCTCACTCGA----------------------TCACG..................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGCACAGGATTCGATGT.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGTGATTGTTCAGGCTGATGGACAGC........................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTGATGGACAGCTCCGCACAG...............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TTACCCGGGG-CTGAAT---T-----TGC................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TCACGTTC-----GTCGCGCTGTGC..............................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTGATGGACAGCTCCGC...................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTCCGCACAGGATTCGATGTGG...2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGGATTCGATGTGGT..2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CACTCGA----------------------TCACGTTC-----GTCGCGCTGTGC..............................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................C-------------------GCAGTGTGATTGTTCAGGC...................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ACTCGA----------------------TCACGTTC-----GTCGCGCTGTGC..............................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000001000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................A-----------------TT---------------------TTG-----------------------TTTGGAT--------------------------------------G-AACCTTCC-------------------GCAG..................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CGCTCACTCGA----------------------TCACGTTC-----GTC.......................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GCCTTCCTTTTTATGTCGTGTCTTCC...............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................TCGCTCACTCGA----------------------TCACGTTC-----GTCGCGCT..................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................A----------------------TCACGTTC-----GTCGCGCTGTGCTCCATT........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGTGATTGTTCAGGCTGATGG.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CACGTTC-----GTCGCGCTGTGCTCCATTC.......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................TCACGTTC-----GTCGCGCTGTGCTCCATTC.......................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGGATTCGATGTGGTT.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAGCTCCGCACAGGATT...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTC-----GTCGCGCTGTGCTCCATTCTG.....................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGCACAGGATTCGATGTGGTT.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TCCACTCACTCGCTCACTCGA----------------------TCACGT.................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGATTCGATGTGGTTG1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCCGCACAGGATTCGATGTGGTT.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGGATTCGATGTGGT..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCTCCGCACAGGATTCGATG......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................AT-AAACGGTCTGGATCTGG...................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................TCACGTTC-----GTCGCGCTGTGCTCC...........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CTCACTCGA----------------------TCACGTTC-----GTCGCGCTGT................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTGATGGACAGCTCCGC...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TT---------------------TTG-----------------------TTTGGAT--------------------------------------G-AACCTTC..........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................TCACTCGA----------------------TCACGTTC-----GTCGCGC...................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CGCTCTACT-CCAC-----TCCACTCACTCGCT....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTTGGAT--------------------------------------G-AACCTTCC-------------------GCAGT.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CACGTTC-----GTCGCGCTGTGCTCCATTCTG.....................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGTTCAGGCTGATGGACAGCTCCGCA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GGA-----------------TT---------------------TTG-----------------------TTTGGAT--------------------------------------G-AACCTTC..........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................TGGA-----------------TT---------------------TTG-----------------------TTTGGAT--------------------------------------G-AACC.............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTCC-------------------GCAGTGTGATTGTTCAGGC...................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTCC-------------------GCAGTGTGATTGTTC.......................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CTCGCTCTACT-CCAC-----TCCACTCACTCGC.....................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCACAGGATTCGATGT.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................T----CCACTCGCTCTACT-CCAC-----TC................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TCTGGATCTGGA-----------------TT---------------------TTG-----------------------TTTGGA..........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CGA----------------------TCACGTTC-----GTCGCGCTGTGCTCCA..........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................TC-----GTCGCGCTGTGCTCCATTC.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................G-----------------------TTTGGAT--------------------------------------G-AACCTTCC-------------------G.....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...................................................................TCACTCGA----------------------TCACGTTC-----GTCGC.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTGATGGACAGCTCCGCACAGGAT............2811.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAGCTCCGCACAGGATTCGATG......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGTTCAGGCTGATGGACAGCTCCG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CCACTCACTCGCTCACTCGA----------------------TCAC...................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTC-----GTCGCGCTGTGCTCCATTCT......................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGATGGACAGCTCCGCACAGGATTCGA........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................G-----------------------TTTGGAT--------------------------------------G-AACCTTCC-------------------GCA...................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........ATCCAAACT---CCAGT----CCACTCG...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGATTCGATGTGGTT.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................................................................................................................................TTGGAT--------------------------------------G-AACCTTCC-------------------GCAGTGTGATTG..........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................T-AT-AAACGGTCTGGATCTGG...................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAGCTCCGCACAGGA.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GA----------------------TCACGTTC-----GTCGCGCT..................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTCCGCACAGGATTCGATGTGG...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTGATGGACAGCTCCGCACAGGATTCGATGT.....3411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TTCTTCTCATTACATTGATTC.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GA----------------------TCACGTTC-----GTCGCGCTGT................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................TCGA----------------------TCACGTTC-----GTCGCGCTGTGCA.............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TTTTTATGTCGTGTCTTCCCA---..........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGATTGTTCAGGCTGATGGA............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TCACTCGA----------------------TCACGTTC-----GTCGCGCTG.................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................A-----------------TT---------------------TTG-----------------------TTTGGAT--------------------------------------G-AACC.............................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................A----------------------TCACGTTC-----GTCGCGCTGTGCTCC...........................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCACAGGATTCGATGT.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TG-----------------------TTTGGAT--------------------------------------G-AACCTTCC-------------------GCA...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GTGTGATTGTTCAGGCTGATGGAC...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACAGCTCCGCACAGA..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CTCACTCGA----------------------TCACGTTC-----GTCGCGCTG.................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CTCGA----------------------TCACGTTC-----GTCGCGCTGTGC..............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................TCGCGCTGTGCTCCATTC.......................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CAGT----CCACTCGCTCTACT-CCAC-----TCC...............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CAGT----CCACTCGCTCTACT-CCAC-----TCCACT............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACT-CCAC-----TCCACTCACTCGCT....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................C-----GTCGCGCTGTGCTCCATTCTGT....................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................CTCACTCGA----------------------TCACGTTC-----GTCG......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGTTC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATTCCTACCCGGGG-CTGAAT---T-----TGCTAACATTGCCTTCCTTTTTATGTCGTGTCTTCCCA---CT-AT-AAACGGTCTGGATCTGGA-----------------TT----------------------TG-----------------------TTTGGAT--------------------------------------G-AACCTTCC-------------------GCAGTGTGATTGTTCAGGCCGATGGACAGCTCCGCACAGGATTCGATGTGGTGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGGCCGATGGACAGCT.......................2012.00202000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGTGATTGTTCAGGCCGATGGACAGC........................2612.00200000001100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CCGATGGACAGCTCCGCACAGG..............2211.00101000000000000000
.......................................................................................................................................................................................................................................................................TT----------------------TG-----------------------TTTGGAT--------------------------------------G-AACCTTCC-------------------GCAGT.................................................2511.00101000000000000000
...................................................................TCACTCGA----------------------TCACGTTC-----GTCGCGCTG.................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CGATGGACAGCTCCGCACAGGATT...........2411.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAGCTCCGCACAGGATTC..........2411.00100010000000000000
......................................................................................................................................................GATTCCTACCCGGGG-A.................................................................................................................................................................................................................................................................................1611.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAGCTCCGCACAGGATT...........2311.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGTTCAGGCCGATGGACAGCT.......................2611.00100010000000000000
............CAAACT---CCAGT----CCACTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GATTGTTCAGGCCGATGGAC...........................2011.00101000000000000000
...............................................................................................................................................................................................................................................ATCTGGA-----------------TT----------------------TG-----------------------TTTGGAT--------------------------------------G-A................................................................................2011.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGGATTCGATGTGGTG.2211.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCTCCGCACAGGATTCGAT.......2511.00100000000100000000
droSec2
TCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGTTC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATTCCTACCCGGGG-CTGAAT---T-----TGCTAACATTGCCTTCCTTTTTATGTCGTGTCTTCCCA---CT-AT-AAACGGTCTGGATCTGGA-----------------TT----------------------TG-----------------------TTTGGAT--------------------------------------G-AACCTTCC-------------------GCAGTGTGATTGTTCAGGCCGATGGACAGCTCCGCACAGGATTCGATGTTGTGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................CGATGGACAGCTCCGCACA................1911.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACAGGATTCGATGTTGT..2111.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGGCCGATGGACAGCT.......................2011.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCACAGGATTCGATGTTGT..2311.0010100
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAGCTCCGCACAGGATTCGAT.......2711.0010100
droYak3
CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATTCCTACCCGGGG-TTGAAT---T-----TGCTAACGTTGCCTTCCTTTTTATGTCGTGTCTTCCCA---CT-AT-TAACGGTCTGGATCTGGA-----------------TT----------------------TG-----------------------TTTGGAT--------------------------------------G-AACCTCCT-------------------CTAGTGTGATTGTTCAGGCCGATGGACAGCTCCGCACAGGATTCGATGTGGTGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGGCCGATGGACAGCTCCG....................2312.00202000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCCGATGGACAGCTCC.....................2011.00110000000000
..........................................................................................................................................................................................................................................TCTGGATCTGGA-----------------TT----------------------TG-----------------------TTTGGAT--------------------------------------G-AACC.............................................................................2811.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CGATGGACAGCTCCGCACAGGATTCGAT.......2811.00110000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAGCTCCGCACAGGATTC..........2411.00110000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GATTGTTCAGGCCGATGGACAGCTCC.....................2611.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACAGCTCCGCACAGGATTCGAT.......2711.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCTCCGCACAGGATTCGATGT.....2711.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................G-AACCTCCT-------------------CTAGTGTGATTGT.........................................2211.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................CTAGTGTGATTGTTCAGGCC..................................2011.00100100000000
........................................................................................................C-----GTCGCGCTGTGCTCCATT........................................................................................................................................................................................................................................................................................................................1911.00100000010000
droEre2
CCAGTCCAAATCCAAACT---CCAGT----CCACTCGCTCTACT-CCAC-----TCCACTCACTCGCTCACTCGA----------------------TCACGATC-----GTCGCGCTGTGCTCCATTCGTAATTTCTTCTCATTACATTGATTCTCAGCCGGGG-TTGAAT---T-----TGCTAACGTTGCCTTCCTTTTTATGTCCTGTCTTCCCA---CT-AT-TAACGGTCTGGATCTGGA-----------------TT----------------------TG-----------------------TTTGGAC--------------------------------------G-AACCTTCT-------------------TTAGTGTGATTGTCCAGGCTGATGGACAGCTCCGCACAGGATTCGATGTGGTGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGATTCGATGTGGTG.1911.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGTCCAGGCTGATGGACAGCTCCGCAC.................2811.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCTCCGCACAGGATTCGATGT.....2511.0011000000
...................................................................................................................................................................................................................................................GGA-----------------TT----------------------TG-----------------------TTTGGAC--------------------------------------G-AACC.............................................................................1911.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCACAGGATTCGATGTGGT..2311.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTCCGCACAGGATTCGATGTGGT..2611.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCCGCACAGGATTCGATGT.....2211.0010000010
........................................................................................................................................................................................................................................GGTCTGGATCTGGA-----------------TT----------------------TG-----------------------TTTGGAC--------------------------------------...................................................................................2511.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGGCTGATGGACAGCTCC.....................2211.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGTCCAGGCTGATGGA............................2111.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCTCCGCACAGGATTCGAT.......2311.0010001000

Generated: 05/19/2015 at 09:14 PM