ID:

dvi_18956

 Coordinate:

scaffold_13049:8308314-8308523 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.9 -10.9 -10.8 -10.5

Flybase annnotation

CDS [Dvir\GJ12170-cds]; exon [dvir_GLEANR_12157:5]; CDS [Dvir\GJ12170-cds]; exon [dvir_GLEANR_12157:4]; intron [Dvir\GJ12170-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCCTGCAGCAGCTTCTCCAGCGCCACGTGCAGCCGGCGATCCGCCGGTGGTAAGTAAAGTGAGTAATGCGGCTGCCTGAGAACCTATTTTGACTAATATGGCGCTCTAATATTTGGTTTTCTTATCTTTAATTGATTTCTAAATTTGCAATTCTGTTTTTGTTTTTATGTTTTTAACTGCAAAATTCGATTTGGTTCGTTTTGTTTGGGTTTGTTGTCGTTTGCCTTTTGTCTTTTGTTGATGACGCGCCCACAAAAAGTCGACGAAAGAGAATGAGATCGACGAAATGGAGGCGTGGCTGGGCAGCTC
******************************************************************************************************************************************************************************....................((.((((......((((............))))................)))).))************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR060663
160_0-2h_embryos_total
 M047
female body
 SRR060657
140_testes_total
 SRR060681
Argx9_testes_total
 SRR060659
Argentina_testes_total
 SRR060664
9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060678
9x140_testes_total
 SRR060680
 9xArg_testes_total
 SRR1106714
embryo_2-4h
 V053
head
 V116
male body		 M027
male body		 M061
embryo
 SRR060665
9_females_carcasses_total
 V047
embryo
.................................................................................................................................................................................................................................................................AAATCGACGAAAGAGAATGAGATC............................. 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TAACTGCAAAATTCGATTTGGTTCGTTT............................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................GAAAAGTCGACGAAAGAGAATGAGATCGA........................... 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TTTTATGTTTTTAACTGCAAAATTCGAT....................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............CTCCAGCGCCACGTGCAGCCGGC................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................GAATGAGATCGACGAAATGGAGGCGT............. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................GATCCGCCGGTGGTAAGT.............................................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGCCTTTTGTCTTTTGTTGATGACGCGC............................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................CGAAAGAGAATGAGATCGACGA........................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCGTTTTGTTTGGGTTTGTTG............................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................AATGAGATCGACGAAATGGAGGCGT............. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TAAATTTGCAATTCTGTTTTTGTT.................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................CGACGAAAGAGAATGAGAT.............................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................ATGAGATCGACGAAAGAGAGGC............... 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................GAGAAAGAGATCGGCGAGATG.................... 21 3 8 0.25 2 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0
.....................................................AGTAACGTGAGTGAAGCGGC............................................................................................................................................................................................................................................. 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................AAAAAGTCGAAGAACGAGAGT................................... 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................................................................................................TGGAGGAGTCGCTGGCCAGCT. 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TGTTTGGATTTCTTGTGGTTTG...................................................................................... 22 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................TGTGATCGTTTGCCTTTT................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GAGGACGTCGTCGAAGAGGTCGCGGTGCACGTCGGCCGCTAGGCGGCCACCATTCATTTCACTCATTACGCCGACGGACTCTTGGATAAAACTGATTATACCGCGAGATTATAAACCAAAAGAATAGAAATTAACTAAAGATTTAAACGTTAAGACAAAAACAAAAATACAAAAATTGACGTTTTAAGCTAAACCAAGCAAAACAAACCCAAACAACAGCAAACGGAAAACAGAAAACAACTACTGCGCGGGTGTTTTTCAGCTGCTTTCTCTTACTCTAGCTGCTTTACCTCCGCACCGACCCGTCGAG
************************************************************....................((.((((......((((............))))................)))).))****************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060667
160_females_carcasses_total
 V053
head
 SRR060676
9xArg_ovaries_total
........................................................................GACGGGCTCTTGGATAAA............................................................................................................................................................................................................................ 18 1 2 0.50 1 1 0 0 0
..........................................................................................................................................................................................................................................................GGTATTGTTCCGCTGCTTTC........................................ 20 3 7 0.14 1 1 0 0 0
.....................................................................................................................AAAAGAGTAGACATTAACT.............................................................................................................................................................................. 19 2 7 0.14 1 0 1 0 0
...........................................................................................................................................................................................................................................................................TGCTCATACTTTAGCTGCTT....................... 20 3 12 0.08 1 0 0 1 0
.........................................................................................................................................................................CGACAATTGACGTTTGAAGC......................................................................................................................... 20 3 17 0.06 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:8308264-8308573 - dvi_18956 CTCCTGCAGC---AGCTTCT-CC------------AGC---GCCACGTGCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGC-GGCTGCCTGAGAACCTATTTTGACTAATATGGCGCTCTAATATT----------------------------T--G-------GTTT-TCTTAT-CTT--------T---------------------AAT---TGATT-----------------TCT-A-AATTTG-----------------CAATTCTGTTTTTGTT-----TT-----T------ATGTTTTTAACTGCAAAATTCGATTT-----GGT----TCGTTT------------------TGTTTGGGTTTGTTGTCGTTTGCCT-TTTG------------------------TCTTTTG------TT--G-ATGACGCGC---CCACAAAAAGTCGACGAAAGAGAATGAGATCGACGAAATGGAGGCGTGGCTGGGCAGCTC
droMoj3 scaffold_6680:11962106-11962407 - CAGCAGCAGCTGTAATACCG-CCACAGCAACAGCAAAC---ACAACGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGT-GAACGCCTTAGAACCGATGTAAATTAATATGTCGCTCTAATCTT----------------------------T--G-------TTTG-TC----------------------------------TAATCCT---TAATTTA-------T-TTCATATTT-C-AATTTG-----------------CAATACTGT-TTATTTATTTACTT---TT------ATGTTATTGAATGCAAATTAAAATTTGGTTTGTTT--TTGGTTT----------------------------------------------C------------------------------------------G-ATGG--CGC---CC--ATATAGTCGACGAAAGAGAACGAGATCGACGAAATGGAGGCGTGGCTGGGCAGCTC
droGri2 scaffold_15110:7335918-7336225 - CAACAGCAGC---AACATCC-CCACAACAA------CA---ACAACGTGCAACCGGCGATCATCCGCCGGTGGTAAGTAAAGTGAGTAATGG-CACCGCCTA-GAACCGATGTAAACTAA--TGGCGCTCTA---CCTATTTTT-CTATATATAATTTTTCGATTT----------GTTG----------------------------------------------------TA-----------TTTGTTT-C-AATTTG-----------------CAA-TTTGTTTGTGTT-----TCT---TT------TCGTTTT------------------------GAT----TCGTTT-------------------ATTTGTGGTTGGGTTCGTCTCTCTTTTTGT------------------------CTT------CTGTTAAT-GTGG--CGC---CC-CCCAAAGTCGACGAAAGAGAATGAAATCGACGAGATGGAGGCGTGGCTGGGCAGCTC
droWil2 scf2_1100000004511:10100617-10100932 + CACCATCAAC---AACAACAGCAACAAAAACAGAACCCGCAAATACGCTCAACCGGCGAT---CCGTCGGTGGTAAGTAAAGTGAGTAATCGAAACCATTGG-AATTTGATCT-AACTAATTTGTTGTTTGA---TCTATATTTCCTATTTAAAAA---------T----------ATTCTCCTTAA--T--------TTGGGCTAA-TTTTGGTT-TTTTCGT---TGATT-----------------TTT-A-AATTTC-----------------AA-------TT--TTT-----CTT---TT------GTGTTTC---ATTTACACTGTG-A--------------------------------------------------------------------TTTGGTTCCTTCGAT---TTGATTT-------G-TT-------TTGG--CAC--------GATAGTCAACAAAAGAGAATGAGATCGATGAAATGGAAGCTTGGTTGGGCACCTC
dp5 XR_group8:2334965-2335282 + CCACAGCAGC------------------------AACC---ACTACGGGCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAATTA-CGCCGCCGG-CAAGCGATCT-AACTAA--TGGCGTTCGA---TC----------------------------T----------GTTT-CCTTAC--TTTAAATCTTTA-----ATCCTCGT-T-TGGCCAT---TCATTTA----------TTGATTAC-A-AATTTC----------------GAACATTTGTTTTGTTT-----C------T------TGGTTTT---ATGCAAATTTTG-TTT-----GGTTCCTTCGTTCGTT----TCCCCTTTT------TGG--------------------------------------------GTTTCTTCTGTGTTTATTCTGTGTGG--CGC-GCC--CAAACAGTCGACGAAAGAGAATGAGATCGATGAAATGGAGGCGTGGTTGGGCAGCTC
droPer2 scaffold_24:720369-720686 - CCACAGCAGC------------------------AACC---ACTACGGGCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAATTA-CGCCGCCGG-CAAGCGATCT-AACTAA--TGGCGTTCGA---TC----------------------------T----------GTTT-CCTTAC--TTTAAATCTTTA-----ATCCTCGT-T-TGGCCAT---TCATTTA----------TTGATTAC-A-AATTTC----------------GAACATTTGTTTTGTTT-----C------T------TGGTTTT---ATGCAAATTTTG-TTT-----GGTTCCTTCGTTCGTT----TCCCCTTTT------TGG--------------------------------------------GTTTCTTCTGTGTTTATTCTGTGTGG--CGC-GCC--CAAACAGTCGACGAAAGAGAATGAGATCGATGAAATGGAGGCGTGGTTGGGCAGCTC
droAna3 scaffold_13337:3695050-3695346 + C---------------------------------------------GGTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACGA--GCCGCCAG-CATCTGGTCT-AACTAA--TGGCGTTCAA---TC----------------------------C----------GTTC-CCTTAC--TT-------TTG-----A-CCTTTGTT-TGGCTATT--TG----G-----CAT-TTTGAATTG-AAAATTTA-AAATTTTTTCATT--TAAAACATGT-TTGGTT-----CT-----T------TTGTTCT---ATGCAAATTACG-TTC-----GATT--TTCGTTT-----------------------------------------------ATTTGATTGTTTCGATCGATTGGTTTCTTCTG-------------TGA--CGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGATGAGATGGAGGCGTGGTTGGGCAGCTC
droBip1 scf7180000395954:95905-96190 + C-------------------------------------------------AGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGA--GCCGCCAG-CATCTGGTCT-AACTAA--TGGCGTTCAA---TC----------------------------C----------GTTCCCCTTAC--TT-------TTG-----A-CCTTATTT-TGGCTATTTGGCATT-ATGA---AT-CTTAAATTTTA-TATTT------------------AAAACTTGT-TTGGTT-----CT-----T------TTGTTCT---ATGCAAATTACG-TTC-----GGTT--TTCGTTT-----------------------------------------------ATTTGATTGTTTCGATCGATTGGTTTCTTCTG-------------TGA--CGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGATGAGATGGAGGCGTGGTTGGGCAGCTC
droKik1 scf7180000302486:2251228-2251553 - CAGCAGCAG---------------------------------CAGCGCGCAACCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAGCTA--GCCGCCAGACAGCCGGTCT-AACTAA--TGGCGTTCGAA--TC----------------------------TGTTTCGTTCCGTTC-CCTTAC-TGT-------TTG-----A-CCTTGTTTTCGGCCAT---TGATTTA---ACCAT-CTTGAATTT-A-AAT-TG-----------------AATA-TCGTTTTGGTT-----CTT---ATTCGTTTTGGTTCT---ATGCAAATTGCG-TTT-----GGCT--TTCGTTCGTT----TC--GTTTT------TGG-----------------------CTTT---GGTTCGAT---TTGGTTTCTTCTG-------------TGG--CGC---CC--ACACAGTCGACGAAAGAGAATGAGATTGACGAGATGGAGGCGTGGTTGGGCAACTC
droFic1 scf7180000453807:587023-587298 + ------------------------------------------------TCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCATGGCAGCCGGTCT-AACTAA--TCGCGTTCGA---TT----------------------------T----------GTTC-CTATAC--TT-------TTG-----A-CCTCGTTT-TTGCCATT--TTATTCA-----CACCTTTTAACCT-A-AAATTGAAAAA---------AAC---A-ACATTTTGGTT-----CT-----T------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droEle1 scf7180000490564:211137-211415 + C---------------------------------------------GCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGTCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC--TT-------TTG-----A-CCTTGTTT-TGGCCATT--TGATTTA-----CAC-TTTGAATTT-A-AATTTG-----------------AAAA-ACATTTTGGTT-----CT-----T------TTGTTTT---ATGCAAATTGCG-TTT-----GGTT--TACGTTT-----------------CCGTT-----------------------TCGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGTTC
droRho1 scf7180000780168:75865-76144 - C------------------------------------------AGCGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC--TT-------TTG-----A-CCTCGTTT-TGGCCGTT--CGATTTA-----CAC-TTTAAATTT-A-AATCTG-----------------AAAA-ATATTTTGGTT-----CT-----T------TTGTTCT---ATGCAAATTGCG-TTT-----GCTT--TTCGTTT-----------------CCGTT-----------------------TCGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droBia1 scf7180000302428:8333951-8334248 - CCGCCGCAG---------------------------GG---CCCACGATCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTG--GCCGAAAGGCAGCCCGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTCCCCTTAC-TTT-------TTT-----A-CCTCGTTT-TTGCCAT---TGATTTA-----CAC-TTTGTTC-T-AAAATTTG-----------------AAAA-ACATTTTGGTT-----CTTCTCCT------TTGTTCT---ATGCAAATTGCG-TTT-----GATT--ATCGTTT---CGA------------------------------------TTTTCGTTTC----------------------------G-T--TTCGG-TTGG--CGC---CC-CACATAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droTak1 scf7180000415664:189290-189606 - CAGCAGCAGC------------------------AGGC---TCAGCGCTCTGCCGGCGATCCGCCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGCAGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC-TTT-------TTG-----A-CCTTGTTTCTGGCCAT---TGATTTG--AAACAC-TTTGAATTT-ACAATTTG-----------------AAAA-ACATTTTGGTT-----CT-----T------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT---CGATTCCG---TTTCCGTT-----------------------TCGTTTT----------------------------G-TTGTTCGG-TTGG--CGCCGCC--CACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droEug1 scf7180000409824:96628-96919 - CTACAGCAA---------------------------GG---ACAACGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATTA--GCCGCAGGGCAGCCCGTCT-AACTAA--TGGCGTTCAA---TT----------------------------T----------GTTC-CCTTAC-TTA-------TTG-----A-CCTCGTTT-TGGCCGT---TGATTTA-----CACTTTTGTATTT-A-AATTTG-----------------AAAA-ATCTTTTGGTT-----CT-----T------TTGTTTT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTAT----------------------------G-TTGTTCGG-TTGG--CGCCGCCCACATACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
dm3 chr3L:9442886-9443167 + ------------------------------------GC---ACAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC-CTT-------TTG-----A-CCTCGTTT-TCGCCAT---TGATTTA-----CAC-TATGTGTCT-A-AATTTG-----------------AAAATATGTTTTGGTT-----CTT---TT------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droSim2 3l:9212081-9212372 + dsi_16482 CCGCAGCAG---------------------------GC---TCAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTACCTTT-------TTG-----A-CCTCGTTT-TCGCCAT---TGATTTA-----CAC-TTTGTGTCT-A-AATTTG-----------------AAAATATGTTTTGGTT-----CTT---TT------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droSec2 scaffold_0:1684058-1684348 + CCGCAGCAG---------------------------GC---TCAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTG--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC-CTT-------TTG-----A-CCTCGTTT-TTGCCAT---TGATTTA-----CAC-TTTGTGTCT-A-AATTTG-----------------AAAATATGTTTTGGTT-----CTT---TT------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droYak3 3L:2481233-2481520 - CCGCAGCAG---------------------------GC---ACAGCGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATTA--GCCACCGGGCAGCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC-GTT-------TTG-----A-CCTCGTTT-TCGCCAT---TGATTTA-----CAC-GTTGTATTT-A-AATTTG-----------------AAAA-ATGTTTTGGTT-----CT-----T------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAAGCGTGGTTGGGCAGCTC
droEre2 scaffold_4784:9434272-9434559 + CCGCAGCAG---------------------------GC---ACAGCGTTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGGCACCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC-GTT-------TTG-----G-CCTCGTTT-TCGCCAT---TGATTTA------AC-TTTGAATTT-A-AATTTG-----------------AAAAAATGTTTTGGTT-----CT-----T------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAAATGGAAGCGTGGTTGGGCAGCTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTCCTGCAGC---AGCTTCT-CC------------AGC---GCCACGTGCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGC-GGCTGCCTGAGAACCTATTTTGACTAATATGGCGCTCTAATATT----------------------------T--G-------GTTT-TCTTAT-CTT--------T---------------------AAT---TGATT-----------------TCT-A-AATTTG-----------------CAATTCTGTTTTTGTT-----TT-----T------ATGTTTTTAACTGCAAAATTCGATTT-----GGT----TCGTTT------------------TGTTTGGGTTTGTTGTCGTTTGCCT-TTTG------------------------TCTTTTG------TT--G-ATGACGCGC---CCACAAAAAGTCGACGAAAGAGAATGAGATCGACGAAATGGAGGCGTGGCTGGGCAGCTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................TAACTGCAAAATTCGATTT-----GGT----TCGTTT------------------.................................................................................................................................................2811.001000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................T-----TT-----T------ATGTTTTTAACTGCAAAATTCGAT.......................................................................................................................................................................................2811.001000000000000000000000000000000100000000000000000000000000000000
..................CT-CC------------AGC---GCCACGTGCAGCCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGACGAAATGGAGGCGT.............2611.001000000000000000000000000000000000000000000100000000000000000000
.........................................................GAT---CCGCCGGTGGTAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCCT-TTTG------------------------TCTTTTG------TT--G-ATGACGCGC---............................................................2811.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGAGAATGAGATCGACGA........................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TCGTTT------------------TGTTTGGGTTTGTTG..................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGATCGACGAAATGGAGGCGT.............2511.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................T-A-AATTTG-----------------CAATTCTGTTTTTGTT-----.............................................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAAGAGAATGAGAT..............................1911.001000000010000000000000000000000000000000000000000000000000000000
droMoj3
CAGCAGCAGCTGTAATACCG-CCACAGCAACAGCAAAC---ACAACGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGT-GAACGCCTTAGAACCGATGTAAATTAATATGTCGCTCTAATCTT----------------------------T--G-------TTTG-TC----------------------------------TAATCCT---TAATTTA-------T-TTCATATTT-C-AATTTG-----------------CAATACTGT-TTATTTATTTACTT---TT------ATGTTATTGAATGCAAATTAAAATTTGGTTTGTTT--TTGGTTT----------------------------------------------C------------------------------------------G-ATGG--CGC---CC--ATATAGTCGACGAAAGAGAACGAGATCGACGAAATGGAGGCGTGGCTGGGCAGCTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGATCGACGAAATGGA..................2011.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGCGTGGCTGGGCAGC..2011.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGATCGACGAAATGGAGGC...............2411.001000001
...........GTAATACCG-CCACAGCAACAGCAAAC---A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGATCGACGAAATGGA..................2111.001000001
.........................................................GAT---CCGCCGGTGGTAAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..................................AAAC---ACAACGCTCAGCCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGGCTGGGCAGCTC1820.501100000
droGri2
CAACAGCAGC---AACATCC-CCACAACAA------CA---ACAACGTGCAACCGGCGATCATCCGCCGGTGGTAAGTAAAGTGAGTAATGG-CACCGCCTA-GAACCGATGTAAACTAA--TGGCGCTCTA---CCTATTTTT-CTATATATAATTTTTCGATTT----------GTTG----------------------------------------------------TA-----------TTTGTTT-C-AATTTG-----------------CAA-TTTGTTTGTGTT-----TCT---TT------TCGTTTT------------------------GAT----TCGTTT-------------------ATTTGTGGTTGGGTTCGTCTCTCTTTTTGT------------------------CTT------CTGTTAAT-GTGG--CGC---CC-CCCAAAGTCGACGAAAGAGAATGAAATCGACGAGATGGAGGCGTGGCTGGGCAGCTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............ACATCC-CCACAACAA------CA---ACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
droWil2
CACCATCAAC---AACAACAGCAACAAAAACAGAACCCGCAAATACGCTCAACCGGCGAT---CCGTCGGTGGTAAGTAAAGTGAGTAATCGAAACCATTGG-AATTTGATCT-AACTAATTTGTTGTTTGA---TCTATATTTCCTATTTAAAAA---------T----------ATTCTCCTTAA--T--------TTGGGCTAA-TTTTGGTT-TTTTCGT---TGATT-----------------TTT-A-AATTTC-----------------AA-------TT--TTT-----CTT---TT------GTGTTTC---ATTTACACTGTG-A--------------------------------------------------------------------TTTGGTTCCTTCGAT---TTGATTT-------G-TT-------TTGG--CAC--------GATAGTCAACAAAAGAGAATGAGATCGATGAAATGGAAGCTTGGTTGGGCACCTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................CGCTCAACCGGCGAT---CCGTCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGATGAAATGGAAGCTTG............2511.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATGAGATCGATGAAATGGAAGC...............2611.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGATGAAATGGAA.................2211.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAAATGGAAGCTTGGTTGGG......2311.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAAAGAGAATGAGA...............................1820.50110000
dp5
CCACAGCAGC------------------------AACC---ACTACGGGCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAATTA-CGCCGCCGG-CAAGCGATCT-AACTAA--TGGCGTTCGA---TC----------------------------T----------GTTT-CCTTAC--TTTAAATCTTTA-----ATCCTCGT-T-TGGCCAT---TCATTTA----------TTGATTAC-A-AATTTC----------------GAACATTTGTTTTGTTT-----C------T------TGGTTTT---ATGCAAATTTTG-TTT-----GGTTCCTTCGTTCGTT----TCCCCTTTT------TGG--------------------------------------------GTTTCTTCTGTGTTTATTCTGTGTGG--CGC-GCC--CAAACAGTCGACGAAAGAGAATGAGATCGATGAAATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAGGCGTGGTTGGGCAG...2211.0010100000000
...........................................TACGGGCAGCCGGCGAA---CCGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............................................GGGCAGCCGGCGAA---CCGCCGGTGGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGATGAAATGGAGGC...............2211.0010000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGTTTATTCTGTGTGG--C.................................................................2011.0010100000000
..................................AACC---ACTACGGGCAGCCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGATGAAATGGAGGCGTG............2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAAATGGAGGCGTGGTTGGGC.....2411.0010100000000
...........................................TACGGGCAGCCGGCGAA---CCGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.........................................ACTACGGGCAGCCGGCGAA---CCGCCGGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTCGACGAAAGAGAATG..................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................T-----GGTTCCTTCGTTCGTT----TCCC........................................................................................................................................................2111.0010100000000
droPer2
CCACAGCAGC------------------------AACC---ACTACGGGCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAATTA-CGCCGCCGG-CAAGCGATCT-AACTAA--TGGCGTTCGA---TC----------------------------T----------GTTT-CCTTAC--TTTAAATCTTTA-----ATCCTCGT-T-TGGCCAT---TCATTTA----------TTGATTAC-A-AATTTC----------------GAACATTTGTTTTGTTT-----C------T------TGGTTTT---ATGCAAATTTTG-TTT-----GGTTCCTTCGTTCGTT----TCCCCTTTT------TGG--------------------------------------------GTTTCTTCTGTGTTTATTCTGTGTGG--CGC-GCC--CAAACAGTCGACGAAAGAGAATGAGATCGATGAAATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAGGCGTGGTTGGGC.....2011.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAAGAGAATGAGATC.............................1911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGATGAAATGGA..................1911.001000001
droAna3
C---------------------------------------------GGTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACGA--GCCGCCAG-CATCTGGTCT-AACTAA--TGGCGTTCAA---TC----------------------------C----------GTTC-CCTTAC--TT-------TTG-----A-CCTTTGTT-TGGCTATT--TG----G-----CAT-TTTGAATTG-AAAATTTA-AAATTTTTTCATT--TAAAACATGT-TTGGTT-----CT-----T------TTGTTCT---ATGCAAATTACG-TTC-----GATT--TTCGTTT-----------------------------------------------ATTTGATTGTTTCGATCGATTGGTTTCTTCTG-------------TGA--CGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGATGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGGCA....2213.003100011
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGG......1812.002000002
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGATGAGATGGAGGCGT.............2012.002010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGAATGAGATCGATGAGAT.....................2311.001000010
..........................................................AT---CCGCCGGTGGTAAGTAAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG-------------TGA--CGC---CC--ACACAGTCGA..............................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGCGTGGTTGGGCAGCTC2311.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGATGAGATGGAGGCGT.............2411.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGC.....1911.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATGAGATCGATGAGATGGAGGC...............2611.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGATGGAGGCGTGGTTGGGC.....2411.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGGCAGC..2411.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGGCAGCTC2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGCGTGGTTGGGCAG...2011.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGATGAGATGGAGGC...............2211.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGCGTGGTTGGGC.....1811.001100000
........................................................CGAT---CCGCCGGTGGTAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCGTGGTTGGGCAG...1811.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGATTGTTTCGATCGATTGGT............................................................................................2111.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGATGAGATGGA..................2111.001000010
droBip1
C-------------------------------------------------AGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGA--GCCGCCAG-CATCTGGTCT-AACTAA--TGGCGTTCAA---TC----------------------------C----------GTTCCCCTTAC--TT-------TTG-----A-CCTTATTT-TGGCTATTTGGCATT-ATGA---AT-CTTAAATTTTA-TATTT------------------AAAACTTGT-TTGGTT-----CT-----T------TTGTTCT---ATGCAAATTACG-TTC-----GGTT--TTCGTTT-----------------------------------------------ATTTGATTGTTTCGATCGATTGGTTTCTTCTG-------------TGA--CGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGATGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
droKik1
CAGCAGCAG---------------------------------CAGCGCGCAACCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAGCTA--GCCGCCAGACAGCCGGTCT-AACTAA--TGGCGTTCGAA--TC----------------------------TGTTTCGTTCCGTTC-CCTTAC-TGT-------TTG-----A-CCTTGTTTTCGGCCAT---TGATTTA---ACCAT-CTTGAATTT-A-AAT-TG-----------------AATA-TCGTTTTGGTT-----CTT---ATTCGTTTTGGTTCT---ATGCAAATTGCG-TTT-----GGCT--TTCGTTCGTT----TC--GTTTT------TGG-----------------------CTTT---GGTTCGAT---TTGGTTTCTTCTG-------------TGG--CGC---CC--ACACAGTCGACGAAAGAGAATGAGATTGACGAGATGGAGGCGTGGTTGGGCAACTCSizeHit CountTotal NormTotal
No Reads
droFic1
------------------------------------------------TCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCATGGCAGCCGGTCT-AACTAA--TCGCGTTCGA---TT----------------------------T----------GTTC-CTATAC--TT-------TTG-----A-CCTCGTTT-TTGCCATT--TTATTCA-----CACCTTTTAACCT-A-AAATTGAAAAA---------AAC---A-ACATTTTGGTT-----CT-----T------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
droEle1
C---------------------------------------------GCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGTCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC--TT-------TTG-----A-CCTTGTTT-TGGCCATT--TGATTTA-----CAC-TTTGAATTT-A-AATTTG-----------------AAAA-ACATTTTGGTT-----CT-----T------TTGTTTT---ATGCAAATTGCG-TTT-----GGTT--TACGTTT-----------------CCGTT-----------------------TCGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGTTCSizeHit CountTotal NormTotal
No Reads
droRho1
C------------------------------------------AGCGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC--TT-------TTG-----A-CCTCGTTT-TGGCCGTT--CGATTTA-----CAC-TTTAAATTT-A-AATCTG-----------------AAAA-ATATTTTGGTT-----CT-----T------TTGTTCT---ATGCAAATTGCG-TTT-----GCTT--TTCGTTT-----------------CCGTT-----------------------TCGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
droBia1
CCGCCGCAG---------------------------GG---CCCACGATCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTG--GCCGAAAGGCAGCCCGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTCCCCTTAC-TTT-------TTT-----A-CCTCGTTT-TTGCCAT---TGATTTA-----CAC-TTTGTTC-T-AAAATTTG-----------------AAAA-ACATTTTGGTT-----CTTCTCCT------TTGTTCT---ATGCAAATTGCG-TTT-----GATT--ATCGTTT---CGA------------------------------------TTTTCGTTTC----------------------------G-T--TTCGG-TTGG--CGC---CC-CACATAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
droTak1
CAGCAGCAGC------------------------AGGC---TCAGCGCTCTGCCGGCGATCCGCCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGCAGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC-TTT-------TTG-----A-CCTTGTTTCTGGCCAT---TGATTTG--AAACAC-TTTGAATTT-ACAATTTG-----------------AAAA-ACATTTTGGTT-----CT-----T------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT---CGATTCCG---TTTCCGTT-----------------------TCGTTTT----------------------------G-TTGTTCGG-TTGG--CGCCGCC--CACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
droEug1
CTACAGCAA---------------------------GG---ACAACGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATTA--GCCGCAGGGCAGCCCGTCT-AACTAA--TGGCGTTCAA---TT----------------------------T----------GTTC-CCTTAC-TTA-------TTG-----A-CCTCGTTT-TGGCCGT---TGATTTA-----CACTTTTGTATTT-A-AATTTG-----------------AAAA-ATCTTTTGGTT-----CT-----T------TTGTTTT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTAT----------------------------G-TTGTTCGG-TTGG--CGCCGCCCACATACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
dm3
------------------------------------GC---ACAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC-CTT-------TTG-----A-CCTCGTTT-TCGCCAT---TGATTTA-----CAC-TATGTGTCT-A-AATTTG-----------------AAAATATGTTTTGGTT-----CTT---TT------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCA....2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TT----------------------------G-TTGTTCGG-TTGG--CGC---............................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGACGAGATGGAGGCGTG............2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGAGGCGTGGTTGGG......1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000010000000000
................................................................CGCCGGTGGTAAGTAAAGTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGG......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGACGAGATGGAGG................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TT-------TTG-----A-CCTCGTTT-TCGCCAT---.....................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CGCCGGTGGTAAGTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................GAA---CCGCCGGTGGTAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAGAATGAGATCGACG.........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCAGC..2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGAGATCGACGAGATGG...................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................GCGAA---CCGCCGGTGGTAAGTAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GTCT-A-AATTTG-----------------AAAATATGTT........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................AAGTGAGTAACTA--GCCGCCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGACGAGATGGAGGC...............2411.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGGC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................................................................................AATTGCG-TTT-----GGTT--TTCGTT....................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGAGATCGACGAGATGGA..................2211.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AA--TGGCGTTCGA---TT----------------------------T----------GTTC-CC.................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCGACGAAAGAGAATGAGA...............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTGTTCGG-TTGG--CGC---CCAC........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................................C---ACAGCGCTCAGCCGGCGAA---C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGACGAAAGAGAATGAGA...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACACAGTCGACGAAAGAGA.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.....................................C---ACAGCGCTCAGCCGGCGAA---CCGCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGAATGAGATCGACGAGATGGA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................TTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CG...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................A---CCGCCGGTGGTAAGTAAAGTGAGTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................GC---ACAGCGCTCAGCCGGCGAA---CCGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GTGAGTAACTA--GCCGCCGGACAGCCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CCTTAC-CTT-------TTG-----A-CCTCGTTT-...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................GCGAA---CCGCCGGTGGTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGATGGAGGCGTGGTTGGG......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATGGAGGCGTGGTTGGGCAGCT.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................TTC-CCTTAC-CTT-------TTG-----A-CCTCG...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................T-------TTG-----A-CCTCGTTT-TCGCCAT---TGATT................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAAAGAGAATGAGA...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGAATGAGATCGAC..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAAGAGAATGAGATCGAC..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCAGCTC2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAATGAGATCGACGAGATGGA..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGAGAATGAGATCGACGA........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCGACGAGATGGAGGCGTGGT..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
....................................................................................................................................................................................................................................................................................................................................................................................................................GTTTT----------------------------G-TTGTTCGG-TTGG--CGC---............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GTTCT---ATGCAAATTGCG-TTT-----G...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGT.............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGACGAGATGGAC.................2211.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAATGAGATCGACGAG.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................AA---CCGCCGGTGGTAAGTAAAGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCAG...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATGGAGGCGTGGTT.........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGAGATGGAGGCGTGG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGACGAGAT.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................TT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGAGATGGAGGCG..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCGTGGTTGGGCAGCT.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................................................................AAATTGCG-TTT-----GGTT--TTCGTT....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATGGAGGCGTGGTTGGGG.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CCGCCGGTGGTAAGTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................TTT----------------------------G-TTGTTCGG-TTGG--CGC---CC..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCGACGAGATGGAGGC...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTT............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TCGCCAT---TGATTTA-----CAC-TA...................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CGGTGGTAAGTAAAGTGAGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................ACAGCGCTCAGCCGGCGAA---CCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................T--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTC...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................AATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGATGGAGGCGTGGTTGGGC.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGAGAATGAGATCGA...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCGACGAGATGGAGGC...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAGATGGAGGCGTGGT..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGAATGAGATCGACGAGATGG...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TTG-----------------AAAATATGTTTTGGTT-----CTT---TT------T..............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGATGGAGGCGTGGTTGGGG.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGT......1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TT...............................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCGTGGTTGGGCAGGGA2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CGCCGGTGGTAAGTAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCGCAGCAG---------------------------GC---TCAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTACCTTT-------TTG-----A-CCTCGTTT-TCGCCAT---TGATTTA-----CAC-TTTGTGTCT-A-AATTTG-----------------AAAATATGTTTTGGTT-----CTT---TT------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................................................................TT----------------------------G-TTGTTCGG-TTGG--CGC---CC..........................................................2012.00200002000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTTTT----------------------------G-TTGTTCGG-TTGG--CGC---............................................................2111.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGACGAGATGGAGG................2111.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCGACGAAAGAGAATGAGAT..............................2311.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGATCGACGAGATGGAGGCGT.............2511.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGAATGAGATCGACGAG.......................2011.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCA....2011.00100000000000100000
....................................GC---TCAGCGCTCAGCCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTTT----------------------------G-TTGTTCGG-TTGG--CG................................................................1911.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTTT----------------------------G-TTGTTCGG-TTGG--CGC---............................................................2011.00101000000000000000
..............................................................................AAAGTGAGTAACTA--GCCGCCGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGAGATGGAGGCGTGG...........2111.00100000000000001000
droSec2
CCGCAGCAG---------------------------GC---TCAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTG--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC-CTT-------TTG-----A-CCTCGTTT-TTGCCAT---TGATTTA-----CAC-TTTGTGTCT-A-AATTTG-----------------AAAATATGTTTTGGTT-----CTT---TT------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGATGGAGGCGTGGTTGGGCA....2611.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCAGCT.2311.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGG......2011.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGAGATCGACGAGAT.....................1911.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGAGATGGAGGCGTGG...........2111.0010001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCGACGAAAGAGAATGAGATC.............................2511.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGACGAGATGGA..................1911.0010010
..............................................GCTCAGCCGGCGAA---CCGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...............................................................CCGCCGGTGGTAAGTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
droYak3
CCGCAGCAG---------------------------GC---ACAGCGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATTA--GCCACCGGGCAGCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC-GTT-------TTG-----A-CCTCGTTT-TCGCCAT---TGATTTA-----CAC-GTTGTATTT-A-AATTTG-----------------AAAA-ATGTTTTGGTT-----CT-----T------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAAGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAGAATGAGAT..............................1516.00600000000006
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGATGGAAGCGTGGTTGGGC.....2513.00300000030000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGACGAGATGGAAGCGTG............2112.00200000020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGAATGAGATCGACGAGATGGA..................2512.00200000020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGATGGAAGCGTGGTTGGGG.....2411.00100010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATGAGATCGACGAGAT.....................2011.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAAAGAGAATGAGATC.............................2111.00110000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAAGCGTGGTTGGGCA....2011.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAAGCGTGGTTGGGC.....1911.00100000010000
........................................................CGAT---CCGCCGGTGGTAAGTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGACGAGATGGAAGCGT.............2011.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAAGAGAATGAGAT..............................1911.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAGCGTGGTTGGGCA....1911.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTGTTCGG-TTGG--CGC---CCACACAC....................................................2411.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGATGGAAGCGTGGT..........1911.00100000010000
.......................................................................................................................................TT----------------------------T----------GTTC-CCTTAC-GTT-------TTG-----A-C.......................................................................................................................................................................................................................................................................................................................2111.00110000000000
.......AG---------------------------GC---ACAGCGCTCAGCCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGAAGCGTGGTTGGGCAGCT.2411.00100000010000
.........................................ACAGCGCTCAGCCGGCGAT---CCGCCGGTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
droEre2
CCGCAGCAG---------------------------GC---ACAGCGTTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGGCACCCGGTCT-AACTAA--TGGCGTTCGA---TT----------------------------T----------GTTC-CCTTAC-GTT-------TTG-----G-CCTCGTTT-TCGCCAT---TGATTTA------AC-TTTGAATTT-A-AATTTG-----------------AAAAAATGTTTTGGTT-----CT-----T------TTGTTCT---ATGCAAATTGCG-TTT-----GGTT--TTCGTTT----------------------------------------------CGTTTT----------------------------G-TTGTTCGG-TTGG--CGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAAATGGAAGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAAGAGAATGAGAT..............................1911.0011000000
....AGCAG---------------------------GC---ACAGCGTTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAGCGTGGTTGGGCAG...2011.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGACGAAATGGA..................1911.0010000100
.CGCAGCAG---------------------------GC---ACAGCGTTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...............................................................CCGCCGGTGGTAAGTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAATGGAAGCGTGGTTGGGC.....2411.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAATGGAAGCGTGGTTG........2211.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAAGCGTGGTTGGGCA....2011.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAATGGAAGCGTGGTTGG.......2211.0010000010

Generated: 05/17/2015 at 03:47 AM