ID:

dvi_1894

 Coordinate:

scaffold_12726:1116516-1116666 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-1.9 -1.9 -1.9 -1.8

Flybase annnotation

CDS [Dvir\GJ15244-cds]; exon [dvir_GLEANR_15565:5]; intron [Dvir\GJ15244-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTGCCACAGTCAGCAGCACCAGCAGCAGCAGCAACAGCAACAACAACAATCTTAACAACAACAACAACAACATAAACAGCAGCAACAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAACAACAGCAAAAGCAACAGCAACTACAATAACAACAGCAACTTAGTAGCAGCTAACGCTAAAGATACAGCTACAGCTACAGCAGCTGCAGCTGCAGCTACAACACAACCACCACAAGCACCCGCC
***********************************************************************************************************************.((...................................................))**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060686
Argx9_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060680
 9xArg_testes_total
 SRR060683
160_testes_total
 M061
embryo
 SRR060676
9xArg_ovaries_total
 SRR060679
140x9_testes_total
 SRR060681
Argx9_testes_total
 V116
male body		 SRR060673
9_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 V047
embryo
....................................................................................................................................................................................................AACAGCTACAGCAGCTGCAGCT................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAACAACAGCAACTTAGTAGC............................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AACAGCAACTTAGTAGCAGCT........................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AACAGCAACAACAACAATCTTAAC................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................ACAATAACAACAGCAACTTAGT............................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TAACGCTAAAGATACAGCTAC.................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AATAACAACAGCAACTTAGTAGCAGCT........................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ACTTAGTAGCTGCTAACGCTAAA............................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................AGCAGCAACAACAGCAAAAGCAACAGC......................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGCTGCAGCTACAACACAACCAC.............. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AACGCTAAAGATACAGCTACAGC................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TAGTAGCAGCTAACGCTAAAGATACA......................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CGACAGCAACTTAGTAGCAGC......................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................GCAGCAACAGCAACAACAACAATCTT...................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAACTACAATAACAACAGTAACTC.................................................................................. 24 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............GCAGCACCAGCAGCAGCAGC........................................................................................................................................................................................................................... 20 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
......................................................................................AGCAGCAGCAGCAACAACAACAGC............................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................AGCAACAGCAGCAGCAGCAACA..................................................................................................................................................... 22 0 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
......................CAGCAGCAGCAACAGCAACA................................................................................................................................................................................................................. 20 0 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0
.....................GCAGCAGCAGCAACAGCAAC.................................................................................................................................................................................................................. 20 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................CAGCAACAACAGCAAAAGCAT............................................................................................................. 21 1 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............GCACCAGCAGCAGCAGCAAC........................................................................................................................................................................................................................ 20 0 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................CAACAGCAAAAGCAACAGCAA....................................................................................................... 21 0 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................GCAACAACAACAGCAGCAGCAGCAGCAGC.............................................................................................................................. 29 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................ACAGCAGCAGCAGCAACAACAACAGC............................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................AGCAGCAGCAGCAACAGCAAC.................................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................AGCAGCAGCAGCAACAACAA................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................AGCAACAACAACAGCAGCAGCAGCAGCA................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCAGCAACAACAACAGCAGCAGCAGCA................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AACAACAACAGCAGCAGCAGCA................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................GCAGCAGCAGCAGCAGCAACAAC........................................................................................................................ 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................AACAACAACAGCAGCAGCAGCAGCAG............................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................AGCAGCAGCAGCAACAACAACAGCA............................................................................................................................................ 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................AACAGCAGCAGCAGCAACA..................................................................................................................................................... 19 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GCAGCAGCAGCAACAGCAACA................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................CAACAACAACAGCAGCAGCAG..................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................AGCAGCAACAACAACAGCAGC.......................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................AACAGCAGCAGCAGCAGCAGCA............................................................................................................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

AACGGTGTCAGTCGTCGTGGTCGTCGTCGTCGTTGTCGTTGTTGTTGTTAGAATTGTTGTTGTTGTTGTTGTATTTGTCGTCGTTGTCGTCGTCGTCGTTGTTGTTGTCGTCGTCGTCGTCGTCGTTGTTGTCGTTTTCGTTGTCGTTGATGTTATTGTTGTCGTTGAATCATCGTCGATTGCGATTTCTATGTCGATGTCGATGTCGTCGACGTCGACGTCGATGTTGTGTTGGTGGTGTTCGTGGGCGG
****************************************************************************.((...................................................))*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060682
9x140_0-2h_embryos_total
 V116
male body		 M047
female body
 V053
head
 SRR060656
9x160_ovaries_total
 SRR060660
Argentina_ovaries_total
 GSM1528803
follicle cells		 M027
male body		 V047
embryo
 M028
head
 M061
embryo
 SRR060659
Argentina_testes_total
 SRR060678
9x140_testes_total
 SRR060679
140x9_testes_total
 SRR060681
Argx9_testes_total
..................................................................................................................................................................CGTTAAATCATCGTCGATT...................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CGAAGTAGGGTTGGTGGTGTT......... 21 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TTAGAATTGTTCTTGTTGT......................................................................................................................................................................................... 19 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................TCGTTGTCGTTGTTGTTGTTA......................................................................................................................................................................................................... 21 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0
..............................CGTTGTCGTTGTTGTTGTTA......................................................................................................................................................................................................... 20 0 20 0.10 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GTTGGTGGTGCTAATGGGC.. 19 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............GTCGTGGTCGTCGTCGTCGTT......................................................................................................................................................................................................................... 21 0 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................CGCCGTTGTTGTCGTTTTCGT.............................................................................................................. 21 1 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................TTTGTCGTCGTTGTCGTCG............................................................................................................................................................... 19 0 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TTGAATCCTCGCCGATTG..................................................................... 18 2 16 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..CGGCGTCAGTGGGCGTGGTC..................................................................................................................................................................................................................................... 20 3 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................TTGTTGTTGTTGTTGTATTT............................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......GTCAGTCGACGAGGTCGTGG................................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........GTCGTCGTGGTCGTCGTCGTC............................................................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................GTTTTCGTTGTCGTTGCTGTT................................................................................................. 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........TCGTCGTGGTCGTCGTCGTCG........................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................GAATTGTTGTTGTTGTTGTTG.................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12726:1116466-1116716 - dvi_1894 T----TGCCAC----------AGTC---------AG---------------------CAGCACCAGCAGCAGC---------AGCAACA------GCAACAACAA---C---------AATCT---T---AACAACAACAACAACAACATAAACAGCAGCAA------CA------------GC---AGCAGC-------------------------AGCAACAACAACAGCAGC---------A---G---CAG---------CAGCAGC---------AA------CAACAG---------------------CAAAAGCAACAGCAACTACAA---------------------T---AACAA---C---------------------------------------AGCAAC------TTAGTAG-CAG-----------------------CTAACG-----CTAAAGAT-ACA------------GCTACAGCT---ACA---GCA------GCTGCAGCTGCA-GCTACAA---CACAACCACCACAA-----------------GCAC--------------C-------------------------------------------------C-GCC
droMoj3 scaffold_6540:5250522-5250760 + ACTGCAGCAG--------------CA------------------------------GCAACAAC---AGCAGCA---------ACAGCA---GCAACAACAACAG---C------------ATTAGC------AGCAGCAACAACAGCAGCAACAGCATCAG------CAGCA---------GC---AGCAGC-------------------------AACA---ACAACAACAGC---------A---A---CAG---------CAGCAGC---------AG------CA---G------------------CTACAACAACAGCA---ACA------------GCA---G------CAACAACAACAGC------------------------------ATTA---GCAGCAGCAACAAC-----------A------------------------------------------GCA------------GCAACAGCA---TCA---GCA------GCAGCAGCAACA-ACAACAA---CAACAGCAACAGCA-----------------GCAG--------------C--------------------------------------------------AGC-
droGri2 scaffold_4500:935-1183 + GCAGCAA--------------AAAC---------AG---------------------CAGCACCAACAGCAGC---------AGCAGCA------GCAGCGTCAACATC------------AG---C---AGCAGCAGCAGCAGCAGTTAAAACAGCAGCAG------CA------------GC---AGCAGC-------------------------AGTTAAAACAACAGCAGC---------A---T---CAG---------CAGCAGC---------AA------AAACAG---------------------CAGCAGCAACAGCAGCAGCA---------GCT---A------AAACAGCAACAGC------------------------------ATCAGCAGC---AGCAGCAGC-----------A------------------------------------------GCA------------GCAT---------CAGCAGCA---GCAGCAGCAGCAGCA-GCTAAAA---CAACAACAACAGCA-----------------GGAC--------------C-------------------------------------------------A-GCA
droWil2 scf2_1100000004961:4996054-4996288 - C----AGCAG--------------CAA------------------------------CAACAAC---AGCAGCA------------ACAACAACAGCAGCAGCAA---C------------AACAGC------AACAGCAACAACAACAGCAGCAGCAACAA------CAACA---------GC---AGC----------------------------AACA---ACAACAGCAGC---------AGCAG---CAACAGCAGCAAC---AGCAAC------A------------A---------------------CAGCAGCA------GCA------------ACA---G------CAACAGCAACAAC------------------------------AGCAGCAAC---AACAACTGC-----------A------------------------------------------GCA------------GCAACAACA---ACA---GCA------GCAACAGCAACA-GCAACAA---CAACAACATCAGCA-----------------GCAA--------------C--------------------------------------------------AGC-
dp5 XR_group6:12701968-12702199 + C----AGCAG--------------CAC------------------------------CAGCAAC---AGCAGCA------------ACAGCAGCATCAGCA---G---C---------AGAAG---C------AGCAGCAGCAACAGCAGCAACAGCAGCAG------CA------------GCAGAAGCAGC-------------------------AGCA---GCAACAGCAGC---------A---A---CAG---------CAGCAGCAACAGCAGCAG---------------------------------------CAGCA---ACA------------GCA---A------CAACAGCAGCAGC------------------------------AACAGCAGCAGCAACAGCAGCAG------C--A------------------------------------------ACA------------GCAGCAGCA------------------ACAGCAGCAGCA-GCATCAGCAACATCAGCAGCAAAA-----------------GCAT--------------C--------------------------------------------------AGC-
droPer2 scaffold_14:2089003-2089249 + C----AGAAT--------------CGG------------------------------CAGCAAC---AGCAGCA------------GCAGCAGCAACAGCAACAG---C------------AGCAGCAGCCACAAAAGCAACAGCAGCAGCAACAGCAGCAG------CA------------GCAGGTGCAGC-------------------------AGCTACAAAAGCAGCAGC---------A---A---CAG---------CACCAGC---------AG------CACGAG------------------CATCAGCAACAGCG---TCA------------GCA---A------CAGCAGCAGCATC------------------------------AGCA---ACAGCATCAGCAGC-----------A------------------------------------------TCA------------GCAACAGCA---TCA---GCA------ACAGCAGCAGCA-GCAGCAG---CTACAGCAGCATAA-----------------GCAG--------------C--------------------------------------------------TGC-
droAna3 scaffold_12929:2932884-2933129 - T----TACAA--------------CAG------------------------CA---GCAGTTACAACAGCAGA---------TGCAGCA------GCAACAACTA---C---------AACAACAGC------AGTTGCAACAACAGAAGTTGCAACAGCAG------CA------------GC---TGCAGC-------------------------AGCA---ACAGCTACAAC---------A---A---CAG---------CAAATGC---------AA------CAACAA------------------TTGCAACAACAGCA---ACT------------GCA---G------CAACAACAG---CTACA---------------------------A---CAACAGCAGCTACAAC-----------A------------------------------------------ACA------------GAAGTTGCA---ACA---GCAGCAGTTGCAACAGCAGCA-GTTGCAA---CAACAGCATCTGCA-----------------GCGT--------------C----------------------------------------------------CG
droBip1 scf7180000395832:708282-708536 - C----AGCGA--------------CAGTTGGT------------------------GCAACAGC---AGCAGG---------AGCAACA------GCAACAACAA---C---------GGTTG---C---AACAGCAGCAGCAGCAACAACAACAACGCTTG------CAACAACAGCAGCAAC---AACAAC-------------------------AACAACGTCTACAACAGC---------A---G---CAG---------CAGCAAC---------AA------CAGCAA---------------------CGCTTGCAACAGCAGCAGCAA---------------------C---AACAG---C---------------------------------------AGCGCTTGCAG---------CAG-----------------------C-AACG-----C------TTGCA------------ACAGCAGCA---ACA---ACA------ACAGCAACGCGT-GCAACAA---CAGCAGCAACAACAAC--------------AACAA--------------C-------------------------------------------------A---A
droKik1 scf7180000302685:196374-196621 + GCAGCAT--------------TTAC---------AG---------------CAGCAGCAGCAAC---AGCATCT------------ACAGCAGCAGCAGCAACAT---C------------ACCAGC------AGCAACAACAACAGCATCTACAGCAGCAA------CAGCA---------GC---AGCTGC-------------------------AGCAACATCTACAGCAGC---------A---A---CAG---------CAGCAGC---------AT------CATCTA---------------------CAGCAGCAGCAGCATCTACAG---------------------C---AACAG---CAGCA---------------------------T---CTACAGCAGCAGCAGC-----------A------------------------------------------GCA------------GCAGCATCT---ACA---GCA------GCAGCAGCAGCA-GCAGCAG---CATCATCTCCAGCA-----------------GCAG--------------C--------------------------------------------------AGC-
droFic1 scf7180000453829:1093006-1093245 + GCAACTGCAG--------------CA------------------------------GCAGCAACTGCAGCAGCAACAACAGCAGCA---------GCAACAA------C------------AG---C---------AGCAACAAC---AGCAGCAGCAACAG------CAACA---------GC---AGCAAC-------------------------TACA---ACAACAACAGC---------A---G---CAA---------CAGCAGC---------AG---CAACAACAG---------------------CAACAGCAGCA------------------ACT---A------CAACAACAACAGCAGCA---------------------------G---CAGCAGCAACTACAACAA------C--A------------------------------------------ACA------------GCACCAAAT---ACA---ACA------ACAGCAGCAACA-GACACTG---CAGCAACAGCAACA-----------------ACAG--------------C-------------------------------------------------A-GCA
droEle1 scf7180000491006:2461899-2462142 - C----CGCAG--------------CAA------------------------------CAGCAACAGCCGGAGT---------TGCAACA------GCAACATCAG---C---------AATAT---C---AACAGCAGCAACAGCAACAGAAGCAGCTACCA------CA------------AAAGGAACTGA-------------------------AGCA---GCAACAGCAGC---------A---ACTCAAT---CAT---CAACAGC---------AA------CA---C------------------CATAACAATCAGCA---ACA------------GCA---G------CAACAGATGCAAC------------------------------AACA---GCAGCAACACAATT-----------A------------------------------------------TCA------------GCAACAGCA---ACA---GCA------GCAACATAATCA-TCAGCAA---CACAACCATCAACA-----------------ACAG--------------C--------------------------------------------------AGC-
droRho1 scf7180000760202:71794-72056 + ATACCCATTTCGTTTTAGCAAATTC---------AA---------CAACAGCA---GCAACAAC---AGCA---------------GCA------GCAACAACAACAGC---------A------GC---AGCAACAACAGCAGCAGCAACAACAGCAGCAGCAACAACAACA---------GC---AGCAGC-------------------------AACA---ACAGCAGCAGC---------A---A---CAA---------CAACAGC---------AG------CA---G---------------------------------CAACAACAACAGCAGCAGCA---A------CAACAGCAGCAGC------------------------------AACAACAGCAGCAACAGC--------------A------------------------------------------ACA------------AC---AACA---ACA---GCA------GCAACAGCAACA-ACAACAA---CAGCAGCTGCAACAAC--------------AACAT--------------C-------------------------------------------------A-GGT
droBia1 scf7180000302402:4220223-4220473 + C----AGCAA--------------CAG------------------------------CAGCATC---AGCTGCA------------ACCTCAGCACCAGCT---A---C---------AAGCG---C---TACAGCAGCAGCAGCAACAACAGCAGCAGCAG---CAACAACA---------GC---AGCAGC-------------------------AGCA---ACAACAGCAGCAGCAGCAACAACAG---CAACAGCAGCAGC---------------------------------------------------AAGTGCAGCA------------------ACT---G------CAACAAG------------------------------------------------CACAGGAG---------C--A---------------------GC-AGCC-----A------CTGCATCAGCAGCAGCAGCAACAACAACATAT---GTT------GCAAGTGCAGCA-ACCACAG---CAACAACCGATAAT-----------------GCAG--------------C-------------------------------------------------C-GCA
droTak1 scf7180000415352:154194-154448 - T----TGCCGC---------CGTTC---------TG---------------------CAGCAGC---AGCAGCA------ACAGCAGCA------CTCTCAGCAT---C---------A---CGCCC---AGCAGCAACATCATGGCCATACGCTGCACCCG------CA------------TCATACACACC-------------------------AGCA---ACAACAGCAGC---------A---A---------------------------------------CACCACCAGCAGCAC---------CAACAGCAACAGCA------------------------A------C------AG---CAGCA---------------------------C---CACCAGCAGCAGCAACATGCCGCCCAG-----------------------CTGG-----CCCACACACTTTCT------------TCGGCCGCC---GCT------------GCTGCTGCTGCCGGCAACAA---CAACGGCAACACCA-----------------ACAC--------------C-------------------------------------------------C-ACT
droEug1 scf7180000409711:1559025-1559288 + C----TGGCAC-------------CAG------------------------CA---ACAGCAAC---ACCAACA---------GCAGCA---ACATCAACAACA------------------TCAAC---AGCAGCAGCAACAACAACAGCAACACCAGCAA------CAACA---------TC---AACATC-------------------------AGCAACAACAACAGCAGC---------A---G---CAA---------CATAAGC---------A------------A---------------------CTCCAGCA------GCA------------GCA---ACAACATC---AACAA---T------------------------------GG-------AGTGGGAACAAC-----------GGCAGCAATAACCAAAGGAGCAAC-AATTATGC--------------------------------------CA------------ACAAC-------------TA----TGCAGCGGCAGCAGC--------------TGCATCTATGTACATGCAACACTTTA----------------------------------ATCCCTACAT-GCA
dm3 chrX:12625157-12625407 - C----AGCAG--------------CAG------------------------------CAGCAGC---AGCAGCA------------ACAGCAACAACAACAA------C---------A---CTAGC---AACAATAACAACAATAGCAGCAACAGCGGCAA------CAACA---------AC---A-CACC--------------AAACGGTGCGCAACA---GCAGCAACAAC---------A---------A---------CACCATC---------AG------CA---G---------CAGCAGCAACATCATCAGCAGCA---AC---------------------------------------------GTGTTGTTGCCAGCAGCAACCAGCAACA---GCAACAAC-----------------A------------------------------------------ACA------------ACTACAGCA---ACA---GCA------GCAGCAGCAGCA-GCAACAA---CAGCAGCAGCAGCA-----------------GCAG--------------C--------------------------------------------------AGC-
droSim2 x:11980772-11981038 - C----CACA-------------AAC---------AA---------------------CAACAGCAGCAGCAGC---------AGCAACA------GCAACAACAA---C---------A---CTAGC---AACAATAACAACAATAGCAGCAACAGCGGCAG------CA------------AC---AGCAGCAGCAACAACACACCAAACGGTGC------------GCAGCAGC---------A---G---CAG---------CAGCAAC---------AA------CACCAT---------------------CAGCAGCAGCAGCAGCAGCAT---------------------C---ATCAG---CAGCAACGTGTTGTTGCCAGCA----------G---CAAC--CAGCAACAGC-----------A------------------------------------------GCA------------ACAGCAGCT---GCA---GCA------ACAGCAGCAGCA-GCAACAA---CAGCAGCAGCAGCA-----------------GCAG--------------C--------------------------------------------------AGC-
droSec2 scaffold_44:20635-20868 - A----TTCCTC----------GATC---------TGGAGCACTCGCTTCAGCA---GCAGCAGATGCAGCAGAT------------GCA------------ATTG---CAGCAGCAACACCAT---C---AGCAGCAGCAGCAGACGCACCAGCAACAGCAG------CA------------AC---ACCAGC-------------------------------------AGCAAC---------A------CCAC---------C---AAC---AGCAGCAG---------------------------------------------CAGCAACTAACCCAGCAGCAGCTG------CAGC---AG---------------------------------------CAGCAACAACAGC--------------A------------------------------------------GCA------------GCAACAACA---TCT---CCA------ACAGCAG-------CAACAC---CAACAGCAGCACCAT-CA---------------GG--------------C--------------------------------------------------GGC-
droYak3 3R:18798201-18798444 + C----AGCAG--------------CAG------------------------------CAACAGC---AGCAACAACAGCAGCAGCAGCA------GCAACAGCAG---C---------AACAT---C---------------------AGCAACAACAGCAA------CAACA---------GC---AGCAGC-------------------------AACA---GCAACAACAGC---------A---A---AAG---------CAGCAAC---------AGCAGCAAC---------------------------AACAGCAGCA---ACA------------GCA---G------CAACAACAG---------------------------------------C---AAC--------------------A------------------------------------------GCA------------GC------A---ACA---GCA----------------------------------GCAGCAGCAG-CAAATTGCCGCAGTCGCAG--------------CAGCCAAATCGCATAAAAGTAATGCCACAGACGTAATCGCCACCGCAACAC-ACC
droEre2 scaffold_4784:3586546-3586775 + T----TGCAG--------------CAACACAACCAG------------------CAGCAGCATC---AGCAGC---------AGCAGCA------GCAGCATCAACAGC------------AG---C------AGCAGCAGCAACAGCAGCAACAGCAGCAA------CA------------GC---AGCAGC-------------------------AGCA---AC------------------AACAG---CAACAGCAGCAGC---AGCAAC------AG---------CAG------------------CAGCATCAACAGCA---ACA------------GCA---G------CAACAGCAA---------------------------------------CAGCAGCAGCAGT--------------T------------------------------------------GCA------------GC---CACA---ACA------------GCAGCTGCAGCC-GCAACAG---CAGCAGCAGTTACA-----------------GCTG--------------C-------------------------------------------------A-GCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
T----TGCCAC----------AGTC---------AG---------------------CAGCACCAGCAGCAGC---------AGCAACA------GCAACAACAA---C---------AATCT---T---AACAACAACAACAACAACATAAACAGCAGCAA------CA------------GC---AGCAGC-------------------------AGCAACAACAACAGCAGC---------A---G---CAG---------CAGCAGC---------AA------CAACAG---------------------CAAAAGCAACAGCAACTACAA---------------------T---AACAA---C---------------------------------------AGCAAC------TTAGTAG-CAG-----------------------CTAACG-----CTAAAGAT-ACA------------GCTACAGCT---ACA---GCA------GCTGCAGCTGCA-GCTACAA---CACAACCACCACAA-----------------GCAC--------------C-------------------------------------------------C-GCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................T---AACAA---C---------------------------------------AGCAAC------TTAGTAG-C......................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AA---C---------------------------------------AGCAAC------TTAGTAG-CAG-----------------------CT...........................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................AACA------GCAACAACAA---C---------AATCT---T---AAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ACAA---------------------T---AACAA---C---------------------------------------AGCAAC------TTAGT..........................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACG-----CTAAAGAT-ACA------------GCTAC.....................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AA---------------------T---AACAA---C---------------------------------------AGCAAC------TTAGTAG-CAG-----------------------CT...........................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AGCAGC---------AA------CAACAG---------------------CAAAAGCAACAGC............................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCA-GCTACAA---CACAACCAC...............................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACG-----CTAAAGAT-ACA------------GCTACAGC..................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTAG-CAG-----------------------CTAACG-----CTAAAGAT-ACA------------..........................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................GC---------AGCAACA------GCAACAACAA---C---------AATCT---T---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
...................................G---------------------CAGCACCAGCAGCAGC---------AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000200000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................A------------GC---AGCAGC-------------------------AGCAACAACAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................24200.102002000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AGCAA------CA------------GC---AGCAGC-------------------------AGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102000000000000000000000000002000000000000000000000000000000000000
..................................................................CAGCAGC---------AGCAACA------GCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000020000000000000000000000000000000
.................................................................GCAGCAGC---------AGCAACA------GCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000200000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CAGC---------AA------CAACAG---------------------CAAAAGCAT................................................................................................................................................................................................................................................................................................................................21130.081000000000000000000000001000000000000000000000000000000000000000
...........................................................GCACCAGCAGCAGC---------AGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.061000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................................................................................................................................................................................CAACAG---------------------CAAAAGCAACAGCAA..........................................................................................................................................................................................................................................................................................................................21190.051000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................GCAACAACAACAGCAGC---------A---G---CAG---------CAGCAGC---------............................................................................................................................................................................................................................................................................................................................................................................29200.051000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................A------CA------------GC---AGCAGC-------------------------AGCAACAACAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
................................................................AGCAGCAGC---------AGCAACA------GCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................A------------GC---AGCAGC-------------------------AGCAACAACAA................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AGCAACAACAACAGCAGC---------A---G---CAG---------CAGCA.......................................................................................................................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GC-------------------------AGCAACAACAACAGCAGC---------A---G---CAG---------CA..........................................................................................................................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................AACAACAACAGCAGC---------A---G---CAG---------CA..........................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................GCAGC---------A---G---CAG---------CAGCAGC---------AA------CAAC................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................AACAACAACAGCAGC---------A---G---CAG---------CAGCAG......................................................................................................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................A------------GC---AGCAGC-------------------------AGCAACAACAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................AA------CA------------GC---AGCAGC-------------------------AGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000100000000000000000000000000000000000000000000000
.................................................................GCAGCAGC---------AGCAACA------GCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................CAACAACAACAGCAGC---------A---G---CAG---------............................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................AGC-------------------------AGCAACAACAACAGCAGC---------................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................AACAGCAGC---------A---G---CAG---------CAGCAGC---------A...........................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
ACTGCAGCAG--------------CA------------------------------GCAACAAC---AGCAGCA---------ACAGCA---GCAACAACAACAG---C------------ATTAGC------AGCAGCAACAACAGCAGCAACAGCATCAG------CAGCA---------GC---AGCAGC-------------------------AACA---ACAACAACAGC---------A---A---CAG---------CAGCAGC---------AG------CA---G------------------CTACAACAACAGCA---ACA------------GCA---G------CAACAACAACAGC------------------------------ATTA---GCAGCAGCAACAAC-----------A------------------------------------------GCA------------GCAACAGCA---TCA---GCA------GCAGCAGCAACA-ACAACAA---CAACAGCAACAGCA-----------------GCAG--------------C--------------------------------------------------AGC-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................ACAGCA---GCAACAACAACAG---C------------AT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.251100000
..........................................................................................................................................................................................................................................................................................................................................ACA------------GCA---G------CAACAACAACAGC------------------------------AT..................................................................................................................................................................................................................................................2240.251100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA---TCA---GCA------GCAGCAGCAAC....................................................................................................................2370.141000010
....................................................................................................................................................AGCAACAGCATCAG------CAGCA---------GC---AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.111000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCAACAGCA---TCA---GCA------GCAGCAGC.......................................................................................................................2490.111000001
......................................................................................................................................................................................................................................................................................................................................A---ACA------------GCA---G------CAACAACAACAGC------------------------------....................................................................................................................................................................................................................................................21200.102000020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---GCA------GCAGCAGCAACA-ACAACAA---CA......................................................................................................27160.061000001
......GCAG--------------CA------------------------------GCAACAAC---AGCAGCA---------ACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAAC-----------A------------------------------------------GCA------------GCAACAGC..................................................................................................................................................22200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAAC-----------A------------------------------------------GCA------------GCA.......................................................................................................................................................21200.051000010
.CTGCAGCAG--------------CA------------------------------GCAACAAC---A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
......................................................................AGCA---------ACAGCA---GCAACAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
.............................................................................................................................GC------AGCAGCAACAACAGCAGCAACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---TCA---GCA------GCAGCAGCAACA-ACA...............................................................................................................22200.051000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---CAACAGCAACAGCA-----------------.........................................................................20200.051100000
.............................................................................................................................................................ATCAG------CAGCA---------GC---AGCAGC-------------------------AAC........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCA-----------------GCAG--------------C--------------------------------------------------A...18200.051010000
.................................................................................................................................................................................................................................ACAACAACAGC---------A---A---CAG---------CAGCAGC---------AG------CA---...............................................................................................................................................................................................................................................................................................................................................................27200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---TCA---GCA------GCAGCAGCAACA-AC................................................................................................................21200.051100000
....................................................................................................................................................AGCAACAGCATCAG------CAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
.....................................................................CAGCA---------ACAGCA---GCAACAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
...................................................................AGCAGCA---------ACAGCA---GCAACAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAACAGCAACAGCA-----------------GCAG--------------.......................................................20200.051100000
............................................................................................................................................................................................................................CA---ACAACAACAGC---------A---A---CAG---------CA..........................................................................................................................................................................................................................................................................................................................................................................................20200.051000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACA-ACAACAA---CAA.....................................................................................................21200.051000010
........................CA------------------------------GCAACAAC---AGCAGCA---------ACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAAC-----------A------------------------------------------GCA------------GCAACAGC..................................................................................................................................................26200.051100000
.......................................................................................................................................CAGCAACAACAGCAGCAACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCAACAGCA---TCA---GCA------GC.............................................................................................................................18200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAGCA-----------------GCAG--------------C--------------------------------------------------AGC-22200.051001000
......GCAG--------------CA------------------------------GCAACAAC---AGCAGCA---------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
...........................................................................................................................................................................................AGCAGC-------------------------AACA---ACAACAACAGC---------A---............................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
..........................................................................................................................................................................................................................................................................................................................................ACA------------GCA---G------CAACAACAACAGC------------------------------....................................................................................................................................................................................................................................................20200.051000010
....................................................................................................................................................................................................................................ACAACAGC---------A---A---CAG---------CAGCAGC---------A...........................................................................................................................................................................................................................................................................................................................................................................21200.051000010
.............................................................................................................................GC------AGCAGCAACAACAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
................................................................................................................................................................................................C-------------------------AACA---ACAACAACAGC---------A---A---CAG---------CAGCA.......................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
droGri2
GCAGCAA--------------AAAC---------AG---------------------CAGCACCAACAGCAGC---------AGCAGCA------GCAGCGTCAACATC------------AG---C---AGCAGCAGCAGCAGCAGTTAAAACAGCAGCAG------CA------------GC---AGCAGC-------------------------AGTTAAAACAACAGCAGC---------A---T---CAG---------CAGCAGC---------AA------AAACAG---------------------CAGCAGCAACAGCAGCAGCA---------GCT---A------AAACAGCAACAGC------------------------------ATCAGCAGC---AGCAGCAGC-----------A------------------------------------------GCA------------GCAT---------CAGCAGCA---GCAGCAGCAGCAGCA-GCTAAAA---CAACAACAACAGCA-----------------GGAC--------------C-------------------------------------------------A-GCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................TCAACATC------------AG---C---AGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.15303
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AGCAGCAGC-----------A------------------------------------------GCA------------GCAT---------CAGCA........................................................................................................................................25200.05110
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC-----------A------------------------------------------GCA------------GCAT---------CAGC.........................................................................................................................................20200.05110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCAT---------CAGCAGCA---GCAGCAGC..........................................................................................................................21200.05110
droWil2
C----AGCAG--------------CAA------------------------------CAACAAC---AGCAGCA------------ACAACAACAGCAGCAGCAA---C------------AACAGC------AACAGCAACAACAACAGCAGCAGCAACAA------CAACA---------GC---AGC----------------------------AACA---ACAACAGCAGC---------AGCAG---CAACAGCAGCAAC---AGCAAC------A------------A---------------------CAGCAGCA------GCA------------ACA---G------CAACAGCAACAAC------------------------------AGCAGCAAC---AACAACTGC-----------A------------------------------------------GCA------------GCAACAACA---ACA---GCA------GCAACAGCAACA-GCAACAA---CAACAACATCAGCA-----------------GCAA--------------C--------------------------------------------------AGC-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................GC---AGC----------------------------AACA---ACAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
....................................................................GCAGCA------------ACAACAACAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
.........................................................................................ACAACAGCAGCAGCAA---C------------AAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACATCAGCA-----------------GCAA--------------C--------------------------------------------------A...19200.10200020
...................................................................................................................................................................................................................................................................................................................................A------GCA------------ACA---G------CAACAGCAACAAC------------------------------AGCAGCA.............................................................................................................................................................................................................................................28100.10101000
.............................................................................................CAGCAGCAGCAA---C------------AACAGC------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
............................................................................................................................AGC------AACAGCAACAACAACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
.........G--------------CAA------------------------------CAACAAC---AGCAGCA------------ACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACA---ACA---GCA------GCAACA.........................................................................................................................21200.10200020
...............................................................................................................................................ACAACAGCAGCAGCAACAA------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200002
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-----------A------------------------------------------GCA------------GCAACAACA---ACA---GCA------GCAACA.........................................................................................................................28140.07100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGC-----------A------------------------------------------GCA------------GCAACAACA---ACA---........................................................................................................................................25150.07101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CAACAACATCAGCA-----------------GCAA--------------C--------------------------------------------------AGC-23180.06100100
.............................................................................................................................................................................................................................................................CAACAGCAGCAAC---AGCAAC------A------------A---------------------CAG......................................................................................................................................................................................................................................................................................................................................24190.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---CAACAACATCAGCA-----------------GCAA--------------C--------------------------------------------------....24190.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---CAACAACATCAGCA-----------------GCAA--------------C--------------------------------------------------A...25190.05101000
.............................................................................................................................................................................................C----------------------------AACA---ACAACAGCAGC---------AGC.............................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
...........................................................................................AACAGCAGCAGCAA---C------------AACAGC------AACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100
..............................................................AC---AGCAGCA------------ACAACAACAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
.......................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AACAACTGC-----------A------------------------------------------GCA------------GCAAC.....................................................................................................................................................21200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-GCAACAA---CAACAACATCAGC...........................................................................................25200.05101000
.............................................................................................................................GC------AACAGCAACAACAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
.........................AA------------------------------CAACAAC---AGCAGCA------------ACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............................................................CAAC---AGCAGCA------------ACAACAACAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..............................................................................................................................C------AACAGCAACAACAACAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
............................................................................................................................................................................................................................................................................................................................................................................CAACAAC------------------------------AGCAGCAAC---AACAAC..................................................................................................................................................................................................................................22200.05101000
.....................................................................................................................................AACAGCAACAACAACAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---CAACAACATCAGCA-----------------GC.......................................................................22200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACATCAGCA-----------------GCAA--------------C--------------------------------------------------....19200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------GCAACAGCAACA-GCA...............................................................................................................18200.05100010
.....................................................................................................................................................................................................................................CAGCAGC---------AGCAG---CAACAGCA................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
............................................................................................................................................ACAACAACAGCAGCAGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
......................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAAC------------------------------AGCAGCAAC---A.......................................................................................................................................................................................................................................23200.05100010
.....................................................................................................................................AACAGCAACAACAACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.............................................................................................................................................CAACAACAGCAGCAGCAACAA------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
............................................................................................................................................................................................GC----------------------------AACA---ACAACAGCAGC---------AGCAG---CA......................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
............................................................................................................................................ACAACAACAGCAGCAGCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
...................................................................................................................................................................................................................................................................CAGCAAC---AGCAAC------A------------A---------------------CAGCAGCA------GCA------------A...........................................................................................................................................................................................................................................................................................................27200.05101000
.......................................................................................................................................................................................................................................................................AAC---AGCAAC------A------------A---------------------CAGCAGCA------GCA------------A...........................................................................................................................................................................................................................................................................................................23200.05101000
...................................................................................................................................................................................................................................................................CAGCAAC---AGCAAC------A------------A---------------------CAGCAGCA------GC.........................................................................................................................................................................................................................................................................................................................25200.05100010
.........................................................................................................................................................................................................................................................................................A------------A---------------------CAGCAGCA------GCA------------ACA---G------CA.............................................................................................................................................................................................................................................................................................19200.05100001
.......................................................................................................................................................................................................................................................................AAC---AGCAAC------A------------A---------------------CAGCAGCA------GCA------------ACA---......................................................................................................................................................................................................................................................................................................25200.05100010
..........................................................................................................................................................................ACA---------GC---AGC----------------------------AACA---ACAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
...................................................................AGCAGCA------------ACAACAACAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CAACAACATCAGCA-----------------GCAA--------------C--------------------------------------------------....22200.05100010
............................................................................................................................................................................A---------GC---AGC----------------------------AACA---ACAACAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
........................................................................................AACAACAGCAGCAGCAA---C------------AAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100
...........................................................................................................................................AACAACAACAGCAGCAGCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
........................................................................................AACAACAGCAGCAGCAA---C------------AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ACA---GCA------GCAACAGCAACA-GCA...............................................................................................................23200.05100001
........................................................................................................................................................................................................................................................................AC---AGCAAC------A------------A---------------------CAGCAGCA------G..........................................................................................................................................................................................................................................................................................................................19200.05100010
dp5
C----AGCAG--------------CAC------------------------------CAGCAAC---AGCAGCA------------ACAGCAGCATCAGCA---G---C---------AGAAG---C------AGCAGCAGCAACAGCAGCAACAGCAGCAG------CA------------GCAGAAGCAGC-------------------------AGCA---GCAACAGCAGC---------A---A---CAG---------CAGCAGCAACAGCAGCAG---------------------------------------CAGCA---ACA------------GCA---A------CAACAGCAGCAGC------------------------------AACAGCAGCAGCAACAGCAGCAG------C--A------------------------------------------ACA------------GCAGCAGCA------------------ACAGCAGCAGCA-GCATCAGCAACATCAGCAGCAAAA-----------------GCAT--------------C--------------------------------------------------AGC-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................CAGCAGCATCAGCA---G---C---------AGAAG---C------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310100000000
.............................................................................................CATCAGCA---G---C---------AGAAG---C------AGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510100000000
..............................................................AC---AGCAGCA------------ACAGCAGCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1310001000000
...........................................................................................................................................................................................................................................................................................................................................................A---A------CAACAGCAGCAGC------------------------------AACAGC..............................................................................................................................................................................................................................................21200.1020200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------ACAGCAGCAGCA-GCATCAGCA.........................................................................................................23120.0810100000000
.......................................................................................................................................................................................................................................GCAGC---------A---A---CAG---------CAGCAGCAACAGC...............................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAG------C--A------------------------------------------ACA------------GC........................................................................................................................................................23200.0510010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAG------C--A------------------------------------------ACA------------GCAGCAGCA------------------ACAGCAGCA......................................................................................................................26200.0510001000000
......................................................................................................................................GCAGCAGCAACAGCAGCAACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
...............................................................................................................................................................................................GC-------------------------AGCA---GCAACAGCAGC---------A---A---C.......................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
...................................................................................................................................................................................................................................................................................................................................AGCA---ACA------------GCA---A------CAACAGCAGC.....................................................................................................................................................................................................................................................................................21200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................AGC------------------------------AACAGCAGCAGCAACAGCAGCAG------C--....................................................................................................................................................................................................................27200.0510000000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------ACA------------GCAGCAGCA------------------ACAGCAGCA......................................................................................................................22200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA------------------ACAGCAGCAGCA-GCA...............................................................................................................21200.0510000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------ACAGCAGCAGCA-GCATCA............................................................................................................20200.0510000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAGCAGCA..............................................................................................................................................................................................................................22200.0510100000000
......................................................................................................................................................................................................................................AGCAGC---------A---A---CAG---------CAGCAGCAACAGC...............................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
..........................................................................................................................................................................................................................................................................................................................................................CA---A------CAACAGCAGCAGC------------------------------AACAGCAG............................................................................................................................................................................................................................................24200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................AGC------------------------------AACAGCAGCAGCAACAGCAGC...............................................................................................................................................................................................................................24200.0510000000001
.........................................................................................................................................................................................................................................AGC---------A---A---CAG---------CAGCAGCAACAGCAGC............................................................................................................................................................................................................................................................................................................................................................................24200.0510000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAG------C--A------------------------------------------ACA------------GCAGCA....................................................................................................................................................27200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................ACA------------GCA---A------CAACAGCAGCAGC------------------------------A...................................................................................................................................................................................................................................................21200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................GCAGC------------------------------AACAGCAGCAGCAACAGC..................................................................................................................................................................................................................................23200.0510010000000
...............................................................................................................................................................................................GC-------------------------AGCA---GCAACAGCAGC---------A---A---CAG---------C...........................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.......................................................................................................................................CAGCAGCAACAGCAGCAACAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
......................................................................................................................................GCAGCAGCAACAGCAGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
..........................................................................................................................................................................................................................................................................................G---------------------------------------CAGCA---ACA------------GCA---A------CAACAGCAGCA....................................................................................................................................................................................................................................................................................24200.0510000100000
..........................................................................................................................................................................................................................................GC---------A---A---CAG---------CAGCAGCAACAGCAGCAG---------------------------------------C..................................................................................................................................................................................................................................................................................................................................26200.0510000000001
..................................................................................................................................................................................................................................................................................CAGCAGCAG---------------------------------------CAGCA---ACA------------GC..........................................................................................................................................................................................................................................................................................................19200.0510000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAG------C--A------------------------------------------ACA------------GCAGCAGC..................................................................................................................................................27200.0510000000001
................................................................................................................................................................................................C-------------------------AGCA---GCAACAGCAGC---------A---A---CA......................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
..............................................................................................................................................................................................................................................................................................................................................................................GCAGC------------------------------AACAGCAGCAGCAACA....................................................................................................................................................................................................................................21200.0510000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------C--A------------------------------------------ACA------------GCAGCAGCA------------------ACAGC..........................................................................................................................23200.0510010000000
................................................................................................................................................................................................C-------------------------AGCA---GCAACAGCAGC---------A---A---CAG---------CA..........................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAG------C--A------------------------------------------ACA------------..........................................................................................................................................................21200.0510000100000
.............................................................................................................................................................................................................................................................................................................................................................................AGCAGC------------------------------AACAGCAGCAGCAACAGC..................................................................................................................................................................................................................................24200.0510010000000
.....................................................................................................................................................................................................................................................A---A---CAG---------CAGCAGCAACAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAG------C--A------------------------------------------ACA------------GCAGCA....................................................................................................................................................22200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AG------C--A------------------------------------------ACA------------GCAGCAGCA------------------ACAGCAGC.......................................................................................................................24200.0510000000001
.....................................................................................................................................AGCAGCAGCAACAGCAGCAACAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................GCAGC------------------------------AACAGCAGCAGCAACAGCAGCA..............................................................................................................................................................................................................................27200.0510100000000
............................................................CAAC---AGCAGCA------------ACAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCAACAGCAGC...............................................................................................................................................................................................................................20200.0510100000000
............................................................................................................................................................................................................................................................................................................................................A------------GCA---A------CAACAGCAGCAGC------------------------------AA..................................................................................................................................................................................................................................................20200.0510000100000
.......................................................................................................................................CAGCAGCAACAGCAGCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
..........................................................AGCAAC---AGCAGCA------------ACAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
...........................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAG---------------------------------------CAGCA---...........................................................................................................................................................................................................................................................................................................................21200.0510000100000
.................................................................................................................................................................................................................................................................................................................................................................................GC------------------------------AACAGCAGCAGCAACAGCAGCAG------C--....................................................................................................................................................................................................................26200.0510000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAG------C--A------------------------------------------ACA------------GCAGCA....................................................................................................................................................26200.0510001000000
.......................................................................................................................................................................................................................................GCAGC---------A---A---CAG---------CAGCAGCAACA.................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
...........................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAG---------------------------------------CAGCA---ACA------------GCA---......................................................................................................................................................................................................................................................................................................27200.0510000000001
........................................................................................................................................................................................................................................CAGC---------A---A---CAG---------CAGCAGCAACAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................26200.0510001000000
..............................................................................................................................................................................................AGC-------------------------AGCA---GCAACAGCAGC---------A---A---CAG---------CAGCA.......................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAG------C--A------------------------------------------ACA------------GCAGC.....................................................................................................................................................24200.0510000000001
.......................................................................................................................................................................................................................................GCAGC---------A---A---CAG---------CAGCAGCAACAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
.........................................................................................................................................................................................................................................AGC---------A---A---CAG---------CAGCAGCAACAGCAGCAG---------------------------------------C..................................................................................................................................................................................................................................................................................................................................27200.0510000000001
...............................................................................................................................................................................................................................................................................CAACAGCAGCAG---------------------------------------CAGCA---ACA------------GC..........................................................................................................................................................................................................................................................................................................22200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCA-GCATCAGCA.........................................................................................................20200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AG------C--A------------------------------------------ACA------------GCAGCAGCA------------------ACAGCAGCAGC....................................................................................................................27200.0510000000001
...............................................................................................................................................................................................................................................................................................................................................................................CAGC------------------------------AACAGCAGCAGCAACAGCAGCA..............................................................................................................................................................................................................................26200.0510001000000
.........................................................................................................................................................................................................................................................A---CAG---------CAGCAGCAACAGCAGC............................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
......................................................................................................................................................................................................................................................................................AGCAG---------------------------------------CAGCA---ACA------------GCA---A------CAACA..........................................................................................................................................................................................................................................................................................22200.0510100000000
....................................................................................................................................................................................................................................................................................................................................GCA---ACA------------GCA---A------CAACAGCAGCAGC------------------------------....................................................................................................................................................................................................................................................23200.0510000001000
.......................................................................................................................................................................................................................................................................................GCAG---------------------------------------CAGCA---ACA------------GCA---A------CAACAGC........................................................................................................................................................................................................................................................................................23200.0510000100000
droPer2
C----AGAAT--------------CGG------------------------------CAGCAAC---AGCAGCA------------GCAGCAGCAACAGCAACAG---C------------AGCAGCAGCCACAAAAGCAACAGCAGCAGCAACAGCAGCAG------CA------------GCAGGTGCAGC-------------------------AGCTACAAAAGCAGCAGC---------A---A---CAG---------CACCAGC---------AG------CACGAG------------------CATCAGCAACAGCG---TCA------------GCA---A------CAGCAGCAGCATC------------------------------AGCA---ACAGCATCAGCAGC-----------A------------------------------------------TCA------------GCAACAGCA---TCA---GCA------ACAGCAGCAGCA-GCAGCAG---CTACAGCAGCATAA-----------------GCAG--------------C--------------------------------------------------TGC-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................AACAGCAGCAGCAACAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.153003000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---TCA---GCA------ACAGCAGCAGCA-GCAGC.............................................................................................................24140.071001000
...................................................................................................................................................CAGCAACAGCAGCAG------CA------------GC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
...............................................................C---AGCAGCA------------GCAGCAGCAACAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
..............................................................AC---AGCAGCA------------GCAGCAGCAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
...................................................................................................CAACAG---C------------AGCAGCAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
..........................................................................................................................................................................................................................................................................................................................................................CA---A------CAGCAGCAGCATC------------------------------AGC.................................................................................................................................................................................................................................................19200.051010000
droAna3
T----TACAA--------------CAG------------------------CA---GCAGTTACAACAGCAGA---------TGCAGCA------GCAACAACTA---C---------AACAACAGC------AGTTGCAACAACAGAAGTTGCAACAGCAG------CA------------GC---TGCAGC-------------------------AGCA---ACAGCTACAAC---------A---A---CAG---------CAAATGC---------AA------CAACAA------------------TTGCAACAACAGCA---ACT------------GCA---G------CAACAACAG---CTACA---------------------------A---CAACAGCAGCTACAAC-----------A------------------------------------------ACA------------GAAGTTGCA---ACA---GCAGCAGTTGCAACAGCAGCA-GTTGCAA---CAACAGCATCTGCA-----------------GCGT--------------C----------------------------------------------------CGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................AACAACAG---CTACA---------------------------A---CAACA..........................................................................................................................................................................................................................................1940.251001000
droBip1
C----AGCGA--------------CAGTTGGT------------------------GCAACAGC---AGCAGG---------AGCAACA------GCAACAACAA---C---------GGTTG---C---AACAGCAGCAGCAGCAACAACAACAACGCTTG------CAACAACAGCAGCAAC---AACAAC-------------------------AACAACGTCTACAACAGC---------A---G---CAG---------CAGCAAC---------AA------CAGCAA---------------------CGCTTGCAACAGCAGCAGCAA---------------------C---AACAG---C---------------------------------------AGCGCTTGCAG---------CAG-----------------------C-AACG-----C------TTGCA------------ACAGCAGCA---ACA---ACA------ACAGCAACGCGT-GCAACAA---CAGCAGCAACAACAAC--------------AACAA--------------C-------------------------------------------------A---ASizeHit CountTotal NormTotal
No Reads
droKik1
GCAGCAT--------------TTAC---------AG---------------CAGCAGCAGCAAC---AGCATCT------------ACAGCAGCAGCAGCAACAT---C------------ACCAGC------AGCAACAACAACAGCATCTACAGCAGCAA------CAGCA---------GC---AGCTGC-------------------------AGCAACATCTACAGCAGC---------A---A---CAG---------CAGCAGC---------AT------CATCTA---------------------CAGCAGCAGCAGCATCTACAG---------------------C---AACAG---CAGCA---------------------------T---CTACAGCAGCAGCAGC-----------A------------------------------------------GCA------------GCAGCATCT---ACA---GCA------GCAGCAGCAGCA-GCAGCAG---CATCATCTCCAGCA-----------------GCAG--------------C--------------------------------------------------AGC-SizeHit CountTotal NormTotal
No Reads
droFic1
GCAACTGCAG--------------CA------------------------------GCAGCAACTGCAGCAGCAACAACAGCAGCA---------GCAACAA------C------------AG---C---------AGCAACAAC---AGCAGCAGCAACAG------CAACA---------GC---AGCAAC-------------------------TACA---ACAACAACAGC---------A---G---CAA---------CAGCAGC---------AG---CAACAACAG---------------------CAACAGCAGCA------------------ACT---A------CAACAACAACAGCAGCA---------------------------G---CAGCAGCAACTACAACAA------C--A------------------------------------------ACA------------GCACCAAAT---ACA---ACA------ACAGCAGCAACA-GACACTG---CAGCAACAGCAACA-----------------ACAG--------------C-------------------------------------------------A-GCASizeHit CountTotal NormTotal
No Reads
droEle1
C----CGCAG--------------CAA------------------------------CAGCAACAGCCGGAGT---------TGCAACA------GCAACATCAG---C---------AATAT---C---AACAGCAGCAACAGCAACAGAAGCAGCTACCA------CA------------AAAGGAACTGA-------------------------AGCA---GCAACAGCAGC---------A---ACTCAAT---CAT---CAACAGC---------AA------CA---C------------------CATAACAATCAGCA---ACA------------GCA---G------CAACAGATGCAAC------------------------------AACA---GCAGCAACACAATT-----------A------------------------------------------TCA------------GCAACAGCA---ACA---GCA------GCAACATAATCA-TCAGCAA---CACAACCATCAACA-----------------ACAG--------------C--------------------------------------------------AGC-SizeHit CountTotal NormTotal
No Reads
droRho1
ATACCCATTTCGTTTTAGCAAATTC---------AA---------CAACAGCA---GCAACAAC---AGCA---------------GCA------GCAACAACAACAGC---------A------GC---AGCAACAACAGCAGCAGCAACAACAGCAGCAGCAACAACAACA---------GC---AGCAGC-------------------------AACA---ACAGCAGCAGC---------A---A---CAA---------CAACAGC---------AG------CA---G---------------------------------CAACAACAACAGCAGCAGCA---A------CAACAGCAGCAGC------------------------------AACAACAGCAGCAACAGC--------------A------------------------------------------ACA------------AC---AACA---ACA---GCA------GCAACAGCAACA-ACAACAA---CAGCAGCTGCAACAAC--------------AACAT--------------C-------------------------------------------------A-GGTSizeHit CountTotal NormTotal
No Reads
droBia1
C----AGCAA--------------CAG------------------------------CAGCATC---AGCTGCA------------ACCTCAGCACCAGCT---A---C---------AAGCG---C---TACAGCAGCAGCAGCAACAACAGCAGCAGCAG---CAACAACA---------GC---AGCAGC-------------------------AGCA---ACAACAGCAGCAGCAGCAACAACAG---CAACAGCAGCAGC---------------------------------------------------AAGTGCAGCA------------------ACT---G------CAACAAG------------------------------------------------CACAGGAG---------C--A---------------------GC-AGCC-----A------CTGCATCAGCAGCAGCAGCAACAACAACATAT---GTT------GCAAGTGCAGCA-ACCACAG---CAACAACCGATAAT-----------------GCAG--------------C-------------------------------------------------C-GCASizeHit CountTotal NormTotal
No Reads
droTak1
T----TGCCGC---------CGTTC---------TG---------------------CAGCAGC---AGCAGCA------ACAGCAGCA------CTCTCAGCAT---C---------A---CGCCC---AGCAGCAACATCATGGCCATACGCTGCACCCG------CA------------TCATACACACC-------------------------AGCA---ACAACAGCAGC---------A---A---------------------------------------CACCACCAGCAGCAC---------CAACAGCAACAGCA------------------------A------C------AG---CAGCA---------------------------C---CACCAGCAGCAGCAACATGCCGCCCAG-----------------------CTGG-----CCCACACACTTTCT------------TCGGCCGCC---GCT------------GCTGCTGCTGCCGGCAACAA---CAACGGCAACACCA-----------------ACAC--------------C-------------------------------------------------C-ACTSizeHit CountTotal NormTotal
No Reads
droEug1
C----TGGCAC-------------CAG------------------------CA---ACAGCAAC---ACCAACA---------GCAGCA---ACATCAACAACA------------------TCAAC---AGCAGCAGCAACAACAACAGCAACACCAGCAA------CAACA---------TC---AACATC-------------------------AGCAACAACAACAGCAGC---------A---G---CAA---------CATAAGC---------A------------A---------------------CTCCAGCA------GCA------------GCA---ACAACATC---AACAA---T------------------------------GG-------AGTGGGAACAAC-----------GGCAGCAATAACCAAAGGAGCAAC-AATTATGC--------------------------------------CA------------ACAAC-------------TA----TGCAGCGGCAGCAGC--------------TGCATCTATGTACATGCAACACTTTA----------------------------------ATCCCTACAT-GCASizeHit CountTotal NormTotal
No Reads
dm3
C----AGCAG--------------CAG------------------------------CAGCAGC---AGCAGCA------------ACAGCAACAACAACAA------C---------A---CTAGC---AACAATAACAACAATAGCAGCAACAGCGGCAA------CAACA---------AC---A-CACC--------------AAACGGTGCGCAACA---GCAGCAACAAC---------A---------A---------CACCATC---------AG------CA---G---------CAGCAGCAACATCATCAGCAGCA---AC---------------------------------------------GTGTTGTTGCCAGCAGCAACCAGCAACA---GCAACAAC-----------------A------------------------------------------ACA------------ACTACAGCA---ACA---GCA------GCAGCAGCAGCA-GCAACAA---CAGCAGCAGCAGCA-----------------GCAG--------------C--------------------------------------------------AGC-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................CACC--------------AAACGGTGCGCAACA---GCAGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................ACAAC---------A---------A---------CACCATC---------AG------CA---G---------CAGCAGC..............................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................CAGCAACATCATCAGCAGCA---AC---------------------------------------------GTG.........................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AGCAACATCATCAGCAGCA---AC---------------------------------------------GTGT........................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
........................................................................CA------------ACAGCAACAACAACAA------C---------A---CTAGC---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CAGCAACATCATCAGCAGCA---AC---------------------------------------------GTGT........................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................C---AGCAGCA------------ACAGCAACAACAACAA------C---------A---C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CAACA---------AC---A-CACC--------------AAACGGTGCGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................AGC---AACAATAACAACAATAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AACAAC---------A---------A---------CACCATC---------AG------CA---G---------CAGCAGC..............................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GCAACAAC---------A---------A---------CACCATC---------AG------CA---G---------CA...................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
...........................................................................................................................................................................................................................................C---------A---------A---------CACCATC---------AG------CA---G---------CAGCAGCAAC...........................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................GCAACAAC---------A---------A---------CACCATC---------AG------C...................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................AATAACAACAATAGCAGCAACAGCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TCAGCAGCA---AC---------------------------------------------GTGTTGTTGC..................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
.........................................................................................................................................................................................................................................................................CACCATC---------AG------CA---G---------CAGCAGCAACATCAA......................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................A------C---------A---CTAGC---AACAATAACAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AACGGTGCGCAACA---GCAGCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................C--------------AAACGGTGCGCAACA---GCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CAGCAACATCATCAGCAGCA---AC---------------------------------------------GT..........................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGCCAGCAGCAACCAGCAACA---GCAAA........................................................................................................................................................................................................................................2612.0020000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CAATAACAACAATAGCAGCAACAGCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................A---AC---------------------------------------------GTGTTGTTGCCAGCAGCAACCAGCAA..................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
......................................................................................................................................................................................AC---A-CACC--------------AAACGGTGCGCAACA---GCA.................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................CAATAGCAGCAACAGCGGCAA------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GCAACAAC---------A---------A---------CACCATC---------AG------CA---G---------CAGC.................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCA---ACA---GCA------GCAGCAGCAGT....................................................................................................................2460.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................ATC---------AG------CA---G---------CAGCAGCAACATC........................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................AGCAGCAACATCATCAGCAGC...............................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................A---------A---------CACCATC---------AG------CA---G---------CAGC.................................................................................................................................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA-GCAACAA---CAGCAGC.................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA-GCAACAA---CAGCAGC.................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
............................................................................................................................................................................................................................................................................CATC---------AG------CA---G---------CAGCAGCAACA..........................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-GCAACAA---CAGCAGCAGCAG............................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CAGCAGCAGCAGCA-----------------GCAG--------------C--------------------------------------------------A...23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA---ACA---GCA------GCAGCAGCA......................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA-GCAACAA---CAGCAGCAGCAGC...........................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
droSim2
C----CACA-------------AAC---------AA---------------------CAACAGCAGCAGCAGC---------AGCAACA------GCAACAACAA---C---------A---CTAGC---AACAATAACAACAATAGCAGCAACAGCGGCAG------CA------------AC---AGCAGCAGCAACAACACACCAAACGGTGC------------GCAGCAGC---------A---G---CAG---------CAGCAAC---------AA------CACCAT---------------------CAGCAGCAGCAGCAGCAGCAT---------------------C---ATCAG---CAGCAACGTGTTGTTGCCAGCA----------G---CAAC--CAGCAACAGC-----------A------------------------------------------GCA------------ACAGCAGCT---GCA---GCA------ACAGCAGCAGCA-GCAACAA---CAGCAGCAGCAGCA-----------------GCAG--------------C--------------------------------------------------AGC-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................TAACAACAATAGCAGCAACAGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................GCCAGCA----------G---CAAC--CAGCAACAGC-----------A------------------------------------------GCA------------ACA.......................................................................................................................................................2911.00101000000000000000
........................................................................................................................................................................CA------------AC---AGCAGCAGCAACAACAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2151.00500000500000000000
..............................................................................................................................................................................................................................................................AG---------CAGCAAC---------AA------CACCAT---------------------CAGCAGCAG................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
...........................................................................................................................................AACAATAGCAGCAACAGCGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.......................................................................................................................................TAACAACAATAGCAGCAACAGCGGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.......................................................................................................................................................................................................................................GCAGC---------A---G---CAG---------CAGCAAC---------AA------CAC.................................................................................................................................................................................................................................................................................................................................................................22100.90900009000000000000
...................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAT---------------------C---ATCAG---CA.................................................................................................................................................................................................................................................................................2270.71500005000000000000
.......................................................................................................................................................................................................................................................................................................................................GCAGCAGCAT---------------------C---ATCAG---CAGCAA.............................................................................................................................................................................................................................................................................2220.50100000100000000000
.......................................................................................................................................................................................................AACACACCAAACGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000010000000000
......ACA-------------AAC---------AA---------------------CAACAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33100000100000000000
.............................................................AGCAGCAGCAGC---------AGCAACA------GCAACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.09100010000000000000
.......................................................................................................................................................................................................................................................................................................................................GCAGCAGCAT---------------------C---ATCAG---CA.................................................................................................................................................................................................................................................................................18140.07100000010000000000
.......................................................................................................................................................AACAGCGGCAG------CA------------AC---A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................16190.05100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---CAGCAGCAGCAGCA-----------------GC.......................................................................22200.05100000000000100000
......................AAC---------AA---------------------CAACAGCAGCAGCAGC---------AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCT---GCA---GCA------AC.............................................................................................................................15200.05100000000001000000
droSec2
A----TTCCTC----------GATC---------TGGAGCACTCGCTTCAGCA---GCAGCAGATGCAGCAGAT------------GCA------------ATTG---CAGCAGCAACACCAT---C---AGCAGCAGCAGCAGACGCACCAGCAACAGCAG------CA------------AC---ACCAGC-------------------------------------AGCAAC---------A------CCAC---------C---AAC---AGCAGCAG---------------------------------------------CAGCAACTAACCCAGCAGCAGCTG------CAGC---AG---------------------------------------CAGCAACAACAGC--------------A------------------------------------------GCA------------GCAACAACA---TCT---CCA------ACAGCAG-------CAACAC---CAACAGCAGCACCAT-CA---------------GG--------------C--------------------------------------------------GGC-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAC---CAACAGCAGCACCAT-........................................................................................2111.0010010
..........................................................................................................................................................................................................................................AC---------A------CCAC---------C---AAC---AGCAGCAG---------------------------------------------CA...........................................................................................................................................................................................................................................................................................................................2120.5010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG-------CAACAC---CAACAGCAGC..............................................................................................21120.0810001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG-------CAACAC---CAACAGCA................................................................................................19180.0610001
...........................................................................................................................................................................................................................................C---------A------CCAC---------C---AAC---AGCAGCAG---------------------------------------------C............................................................................................................................................................................................................................................................................................................................19200.0510010
.......................................................................................................................................................................................................................................................................................................................................................................AGC---AG---------------------------------------CAGCAACAACAGC--------------A------------------------------------------GCA------------..........................................................................................................................................................22200.0510010
droYak3
C----AGCAG--------------CAG------------------------------CAACAGC---AGCAACAACAGCAGCAGCAGCA------GCAACAGCAG---C---------AACAT---C---------------------AGCAACAACAGCAA------CAACA---------GC---AGCAGC-------------------------AACA---GCAACAACAGC---------A---A---AAG---------CAGCAAC---------AGCAGCAAC---------------------------AACAGCAGCA---ACA------------GCA---G------CAACAACAG---------------------------------------C---AAC--------------------A------------------------------------------GCA------------GC------A---ACA---GCA----------------------------------GCAGCAGCAG-CAAATTGCCGCAGTCGCAG--------------CAGCCAAATCGCATAAAAGTAATGCCACAGACGTAATCGCCACCGCAACAC-ACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGACGTAATCGCCACCGCAACA.....2411.00100010000000
.........................................................................................................................................................................................................................................................A---AAG---------CAGCAAC---------AGCAGCAAC---------------------------AAC.....................................................................................................................................................................................................................................................................................................................................2320.50101000000000
........................................................................................................G---C---------AACAT---C---------------------AGCAACAACAGCAA------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25101000000000
.............................................................AGC---AGCAACAACAGCAGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15303000000000
........................................................................CAACAGCAGCAGCAGCA------GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.15303000000000
...............................................................................AGCAGCAGCA------GCAACAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10202000000000
..............................................................................................................................................................................................................................................................AG---------CAGCAAC---------AGCAGCAAC---------------------------AACAGCAGC...............................................................................................................................................................................................................................................................................................................................27150.07100100000000
........AG--------------CAG------------------------------CAACAGC---AGCAACAACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27150.07100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GC------A---ACA---GCA----------------------------------GCAGCAGCA..........................................................................................19200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------GCA------------GC------A---ACA---GCA----------------------------------GCAGCAGCAG-C.......................................................................................24200.05100010000000
........................................................................................................................................................................................................................................................................................................................................................................ACAACAG---------------------------------------C---AAC--------------------A------------------------------------------GCA------------GC------A---AC............................................................................................................................................20200.05100000100000
............................................................................................................................................................................A---------GC---AGCAGC-------------------------AACA---GCAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------GC------A---ACA---GCA----------------------------------GCAGCAGC...........................................................................................19200.05100010000000
..............................................................................CAGCAGCAGCA------GCAACAGCAG---C---------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010000000
.........................................................CAACAGC---AGCAACAACAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
................................................................................................................................................................................................................................................................................................AC---------------------------AACAGCAGCA---ACA------------GCA---G------CA.............................................................................................................................................................................................................................................................................................21200.05101000000000
........................................................................CAACAGCAGCAGCAGCA------GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000100000
............................................................................................................................................................................................................................................................................CAAC---------AGCAGCAAC---------------------------AACAGCAGCA---...........................................................................................................................................................................................................................................................................................................................23200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AAC--------------------A------------------------------------------GCA------------GC------A---ACA---GCA----------------------------------GCAGCAG............................................................................................23200.05101000000000
..........................................................................ACAGCAGCAGCAGCA------GCAACAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100100000000
............................................................................AGCAGCAGCAGCA------GCAACAGCAG---C---------AAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000001
.........................................................................................................................................................CAACAGCAA------CAACA---------GC---AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
..........................................................AACAGC---AGCAACAACAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
.............................................................................................................................................................AGCAA------CAACA---------GC---AGCAGC-------------------------AACA---GC..................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100100000000
..........................................................................................................................................................................................................................................................................................GCAGCAAC---------------------------AACAGCAGCA---ACA------------GCA---......................................................................................................................................................................................................................................................................................................24200.05101000000000
....................................................................GCAACAACAGCAGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100000000
................................................................................GCAGCAGCA------GCAACAGCAG---C---------AACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
...............................................................................................................................................................................................................................................................................................................................................................G------CAACAACAG---------------------------------------C---AAC--------------------A------------------------------------------GCA------------GC------..................................................................................................................................................20200.05101000000000
..............................................................................CAGCAGCAGCA------GCAACAGCAG---C---------AAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000001
......GCAG--------------CAG------------------------------CAACAGC---AGCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100000000
............................................................................................................................................................CAGCAA------CAACA---------GC---AGCAGC-------------------------AACA---GC..................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
...............................................................................................................................................................................................................................................................................................AAC---------------------------AACAGCAGCA---ACA------------GCA---G------...............................................................................................................................................................................................................................................................................................20200.05101000000000
............................................................CAGC---AGCAACAACAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
...............................................................................................................................................................................................................................................................................................AAC---------------------------AACAGCAGCA---ACA------------GCA---......................................................................................................................................................................................................................................................................................................19200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AAC--------------------A------------------------------------------GCA------------GC------A---ACA---GCA----------------------------------GCAGCAGC...........................................................................................24200.05101000000000
...............................................................................................................................................................................................................................................................................C---------AGCAGCAAC---------------------------AACAGCAGCA---...........................................................................................................................................................................................................................................................................................................................20200.05101000000000
..............................................................................................................................................................GCAA------CAACA---------GC---AGCAGC-------------------------AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
............................................................................................................................................................CAGCAA------CAACA---------GC---AGCAGC-------------------------A..........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
...............................................................................AGCAGCAGCA------GCAACAGCAG---C---------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010000000
droEre2
T----TGCAG--------------CAACACAACCAG------------------CAGCAGCATC---AGCAGC---------AGCAGCA------GCAGCATCAACAGC------------AG---C------AGCAGCAGCAACAGCAGCAACAGCAGCAA------CA------------GC---AGCAGC-------------------------AGCA---AC------------------AACAG---CAACAGCAGCAGC---AGCAAC------AG---------CAG------------------CAGCATCAACAGCA---ACA------------GCA---G------CAACAGCAA---------------------------------------CAGCAGCAGCAGT--------------T------------------------------------------GCA------------GC---CACA---ACA------------GCAGCTGCAGCC-GCAACAG---CAGCAGCAGTTACA-----------------GCTG--------------C-------------------------------------------------A-GCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAG---CAGCAGCAGTTACA-----------------GCTG--------------C-------------------------------------------------A-...2711.0011000000
.........G--------------CAACACAACCAG------------------CAGCAGCATC---AGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA---ACA------------GCAGCTGCAGCC-GCA...............................................................................................................2211.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................AACAGCAA---------------------------------------CAGCAGCAGCAGT--------------T------------------------------------------.........................................................................................................................................................................2220.5010001000
........................................................................................................................................................................................................................................................................................................................................................................ACAGCAA---------------------------------------CAGCAGCAGCAGT--------------T------------------------------------------.........................................................................................................................................................................2120.5010000010
.....................................................................................................................................................................................................................................................................................................AG------------------CAGCATCAACAGCA---ACA------------............................................................................................................................................................................................................................................................................................................1930.3310000100
...............................................................................................GCAGCATCAACAGC------------AG---C------AGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510100000
...........................................................................................................................................................GCAGCAA------CA------------GC---AGCAGC-------------------------AGC........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1531000020
...................................G------------------CAGCAGCATC---AGCAGC---------AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1022000000
.......................................................................................................................................................AACAGCAGCAA------CA------------GC---AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020002000
...............................ACCAG------------------CAGCAGCATC---AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000010
...................................................................................................................................................CAGCAACAGCAGCAA------CA------------GC---AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1021000100
.......................................................................................................................................................................................................................................................................................................................................................................AACAGCAA---------------------------------------CAGCAGCAGC.....................................................................................................................................................................................................................................18200.1020000020
...............................................................................................................................................................................................GC-------------------------AGCA---AC------------------AACAG---CAACAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................24120.0810000010
......................................................................AGC---------AGCAGCA------GCAGCATCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.0811000000
...................................................................................................CATCAACAGC------------AG---C------AGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.0610001000
..........................................................................................................................................................................................................................AGCA---AC------------------AACAG---CAACAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................22160.0610000010
..........................................................................................................................................................................................................................................................................................................................................................................AGCAA---------------------------------------CAGCAGCAGCAGT--------------....................................................................................................................................................................................................................18190.0511000000
......................................................CAGCAGCATC---AGCAGC---------AGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000010
...........................................................................................................................................................................................................................GCA---AC------------------AACAG---CAACAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000
.........................................................................................................................................GCAGCAACAGCAGCAACAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100
....................................................................................................................................................AGCAACAGCAGCAA------CA------------GC---AGCAGC-------------------------AGC........................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0511000000
....................................................................................................................................................AGCAACAGCAGCAA------CA------------GC---A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100
...................................................................................................................................................................................................................................................................................................................................AGCA---ACA------------GCA---G------CAACAGCA.......................................................................................................................................................................................................................................................................................19200.0510000100
.................................................................................................................................................................................................................................AC------------------AACAG---CAACAGCAGCAGC---........................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
...............................................................................................................................................................................................................................................................ACAGCAGCAGC---AGCAAC------AG---------C................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
.............................................................................................................................................................................................................................................................CAACAGCAGCAGC---AGCAAC------AG---------CA...............................................................................................................................................................................................................................................................................................................................................................23200.0510000010
..............................................................................................................................................................................................................................................................AACAGCAGCAGC---AGCAAC------AG---------CAG------------------CA..........................................................................................................................................................................................................................................................................................................................................25200.0510001000
....................................................................................................ATCAACAGC------------AG---C------AGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
..........................................................................................................................G---C------AGCAGCAGCAACAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000000
.................................................................................................................................................AGCAGCAACAGCAGCAA------CA------------GC---AGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000000
.....................................................................................................................................................................................................................................................................GCAGC---AGCAAC------AG---------CAG------------------CAGCA.......................................................................................................................................................................................................................................................................................................................................21200.0510001000
............................................................................................................................................................................................................................CA---AC------------------AACAG---CAACAGCAGCAG............................................................................................................................................................................................................................................................................................................................................................................................21200.0510001000
.............................................................................................................................................................AGCAA------CA------------GC---AGCAGC-------------------------AGCA---....................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000
...................................................................................................CATCAACAGC------------AG---C------AGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010
..........................................................................................................................................................................................................................................................................................................................................ACA------------GCA---G------CAACAGCAA---------------------------------------CAGC...........................................................................................................................................................................................................................................20200.0510100000
.....................................................................................................................................AGCAGCAGCAACAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000
.....................................................................................................................................................................................................................................................................GCAGC---AGCAAC------AG---------CAG------------------CAGC........................................................................................................................................................................................................................................................................................................................................20200.0511000000
..............................................................................................................................................................................................................................................................AACAGCAGCAGC---AGCAAC------AG---------CAG------------------C...........................................................................................................................................................................................................................................................................................................................................24200.0510000010
............................................................................................................................................................................................................................CA---AC------------------AACAG---CAACAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000
..........................................................................................................AGC------------AG---C------AGCAGCAGCAACAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000
........................................................GCAGCATC---AGCAGC---------AGCAGCA------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100
...........................................................................................................................................................GCAGCAA------CA------------GC---AGCAGC-------------------------AGCA---A...................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0511000000
............................................................CATC---AGCAGC---------AGCAGCA------GCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510001000
...........................................................GCATC---AGCAGC---------AGCAGCA------GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
..............................................................................................................................................................GCAA------CA------------GC---AGCAGC-------------------------AGCA---AC------------------A...............................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
.......................................................................................................................................................................................................................................................CAG---CAACAGCAGCAGC---AGC.....................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000
............................................................................................................................................................................................................................CA---AC------------------AACAG---CAACAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................19200.0511000000
........................................................................................................................................................ACAGCAGCAA------CA------------GC---AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000100
..........................................................................................................................................CAGCAACAGCAGCAACAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000000
................................................................................................................................................................................................................................................................CAGCAGCAGC---AGCAAC------AG---------C................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
............................................................................................................................................................CAGCAA------CA------------GC---AGCAGC-------------------------AGCA---AC------------------................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000
..................................................................................................................................................................................................................................C------------------AACAG---CAACAGCAGCAGC---AGCA....................................................................................................................................................................................................................................................................................................................................................................................23200.0510001000
...................................G------------------CAGCAGCATC---AGCAGC---------AGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000

Generated: 05/17/2015 at 03:46 AM