ID:

dvi_18756

 Coordinate:

scaffold_13049:6916683-6916890 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.7 -9.2 -9.2 -9.0

Flybase annnotation

exon [dvir_GLEANR_12252:9]; CDS [Dvir\GJ12273-cds]; exon [dvir_GLEANR_12252:10]; CDS [Dvir\GJ12273-cds]; intron [Dvir\GJ12273-in]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATAGTTGAGCAGGCCGAAATAGAACCCGACCAAGTGGTGGACCATGCCAGGTTAATATCCTTAACTCTGTGTTAGCATTCGATATATCCCCCCTAAGAAGTCGGTTATTCTGGGGTGCCGCCCTCTGTTTGTGTTGTCCACAACCTGTTCCATGGCGTGTGCCTACGGTTATACCTCCCTACCCGCCCCTTTTCCTTCCCCCACCCATGTTGTGGCCGTCGCTTTAACTCGTATCATTTGAACTCTTTACAAATTCAGTTTTGTTTACAATTCACTGCAACATCGCGACACTGGTAGGGAGCCAGAAA
*************************************************************************************************..((..(((((....(((.............(((((.....)))))))).....)))))..))**************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060676
9xArg_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR1106725
embryo_14-16h
 SRR1106727
larvae
 GSM1528803
follicle cells		 SRR060678
9x140_testes_total
 SRR060666
160_males_carcasses_total
 M027
male body
.................................................................................................AAGTCGGTTATTCTGGGGTGC.............................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................GTTATTCTGGGGTGCCGCCCTCTGT.................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................AATAGAACCCGACCAAGTGGT.............................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................GCAACATCGCGACACTGGTAG........... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TAACTTGTATCATTTGAACTC............................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................AACCTGTTCCATGGCGTGT.................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................TAATATCCTTAACTCTGTGC............................................................................................................................................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AACTCGTATCATTTGAACTCTTTACAAATTCAGTTTTGTT........................................... 40 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...........................GACCAAGTGGTGGACCATGCCA................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................CAAGTGGTGGACCATGCCAG.................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............CGAAATAGAACCCGACCAAGTGGT.............................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ACCCACGTTGTGGCCG.......................................................................................... 16 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0
................................................................CTCAGTGGTAGCATTCGAC................................................................................................................................................................................................................................. 19 3 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0
...............................AAGTGGTTGAGCATGCCA................................................................................................................................................................................................................................................................... 18 2 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0
..................................TCGTGGCCCATTCCAGGTT............................................................................................................................................................................................................................................................... 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 1 0
.........................................................TCCGTTACTCTGTGTTCGC........................................................................................................................................................................................................................................ 19 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CCCAAGTTGTGGCCG.......................................................................................... 15 1 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................GTCAATTATTCTGGGGTC............................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TATCAACTCGTCCGGCTTTATCTTGGGCTGGTTCACCACCTGGTACGGTCCAATTATAGGAATTGAGACACAATCGTAAGCTATATAGGGGGGATTCTTCAGCCAATAAGACCCCACGGCGGGAGACAAACACAACAGGTGTTGGACAAGGTACCGCACACGGATGCCAATATGGAGGGATGGGCGGGGAAAAGGAAGGGGGTGGGTACAACACCGGCAGCGAAATTGAGCATAGTAAACTTGAGAAATGTTTAAGTCAAAACAAATGTTAAGTGACGTTGTAGCGCTGTGACCATCCCTCGGTCTTT
****************************************************************************************************************************************************..((..(((((....(((.............(((((.....)))))))).....)))))..))************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 SRR060662
9x160_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 V047
embryo
 SRR060682
9x140_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 V053
head
 M061
embryo
 SRR060659
Argentina_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060679
140x9_testes_total
 SRR060666
160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 M027
male body		 SRR060686
Argx9_0-2h_embryos_total
 SRR060660
Argentina_ovaries_total
 SRR060657
140_testes_total
 SRR060664
9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 M028
head
 GSM1528803
follicle cells		 SRR060675
140x9_ovaries_total
 SRR060668
160x9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060688
160_ovaries_total
 SRR060683
160_testes_total
 SRR060681
Argx9_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060655
9x160_testes_total
 SRR1106727
larvae
 SRR1106728
larvae
 SRR060673
9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060689
160x9_testes_total
 SRR060670
9_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060677
Argx9_ovaries_total
.............................................................................................................................................................................GGAGTGATGGGCTGGGAA..................................................................................................................... 18 2 6 1656.50 9939 7276 1195 202 347 158 68 103 107 48 41 67 42 43 29 30 36 22 17 21 22 22 2 6 1 7 0 6 2 2 0 1 2 3 2 3 2 0 1 1 1 1 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCTGGGAAT.................................................................................................................... 19 3 12 461.75 5541 4287 531 91 201 79 40 60 30 32 18 26 18 15 20 6 9 15 13 8 8 11 3 2 1 1 1 6 0 1 0 5 0 1 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCTGGGAAT.................................................................................................................... 18 3 20 401.60 8032 6663 195 114 273 195 33 80 25 50 11 11 21 26 36 55 17 31 5 21 9 9 45 27 18 0 0 4 18 13 0 4 9 0 3 0 1 0 3 3 0 0 3 0 1
...........................................................................................................................................................................CGGGAGTGATGGGCGGGGAA..................................................................................................................... 20 3 10 34.30 343 18 17 216 0 3 19 1 25 2 21 0 12 1 0 0 0 0 3 0 0 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CTGGAGTGATGGGCTGGGAA..................................................................................................................... 20 3 3 24.67 74 11 10 24 0 2 19 1 2 1 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGCGATGGGCTGGGAA..................................................................................................................... 18 2 1 14.00 14 12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCTGGGAATA................................................................................................................... 20 3 1 10.00 10 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGGAGTGATGGGCTGGGAA..................................................................................................................... 19 2 1 10.00 10 1 1 3 1 0 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGGAGTGATGGGCGGGGAA..................................................................................................................... 19 2 3 9.00 27 4 1 10 0 1 4 0 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TCTGGAGTGATGGGCTGGGAA..................................................................................................................... 21 3 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGGGATGGGCTGGGAA..................................................................................................................... 18 1 1 6.00 6 1 2 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CAGGGAGTGATGGGCGGGGAA..................................................................................................................... 21 3 1 5.00 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCTGGGAA..................................................................................................................... 17 2 7 4.57 32 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGGAGTGATGGGCTGGGAAT.................................................................................................................... 20 3 1 4.00 4 1 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCTGGGAATA................................................................................................................... 19 3 3 4.00 12 9 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCCGGGAA..................................................................................................................... 18 2 4 3.75 15 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCGGGGAA..................................................................................................................... 18 1 2 3.00 6 3 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGGAGGGATGGGCTGGGAA..................................................................................................................... 19 2 5 2.80 14 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CGGGAGGGATGGGCGGGGAA..................................................................................................................... 20 2 2 2.50 5 0 0 3 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCTGGGAAA.................................................................................................................... 18 2 4 2.25 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCTGGGAAA.................................................................................................................... 19 2 4 2.25 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGGAGTGATGGGCCGGGAA..................................................................................................................... 19 3 14 2.07 29 11 6 6 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCGGGGAAT.................................................................................................................... 19 2 2 2.00 4 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGGGAGGGATGGGCTGGGAA..................................................................................................................... 20 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCGGGGAAT.................................................................................................................... 18 2 3 2.00 6 3 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CAGGGAGGGATGGGCTGGGAA..................................................................................................................... 21 3 3 1.33 4 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGCGATGGGCTGGGAAT.................................................................................................................... 19 3 3 1.33 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGGGATGGGCTGGGAATC................................................................................................................... 20 3 3 1.33 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCCGGGAAT.................................................................................................................... 19 3 6 1.17 7 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGGAGTGATGGGCTGGGAAA.................................................................................................................... 20 3 7 1.14 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGGAGCGATGGGCTGGGAA..................................................................................................................... 19 3 14 1.07 15 8 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGGGAGTGATGGGCGGGGAA..................................................................................................................... 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TAGGGGGTGGGTACAACTC.............................................................................................. 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCTGGGAAAATG................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CCGGGAGGGATGGGCGGGGAA..................................................................................................................... 21 3 5 1.00 5 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGGTACGACACCGGCAGCGAG.................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CTGGAGGGATGGGCGGGGAA..................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGGGAGTGATGGGCGGGGAAT.................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGGGATGGGCTGGGAAT.................................................................................................................... 19 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CTGGAGGGATGGGCTGGGA...................................................................................................................... 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGGGAGTGATGGGCGGGGAAT.................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGGAGTGATGGGCTGGGA...................................................................................................................... 18 2 3 1.00 3 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CTGGAGGGATGGGCTGGGAAT.................................................................................................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TTGAGAAATGTTTAAGTCAAA............................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................CGTTGTAGCGCTGTGACCATC........... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATGGAGTGATGGGCTGGGAA..................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCTGGGAATAG.................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCTGGGAAAA................................................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGGAGGGATGGGCTGGGAAT.................................................................................................................... 20 3 9 0.78 7 4 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCTGGGAACA................................................................................................................... 20 3 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGGAGTGATGGGCGGGGAAT.................................................................................................................... 20 3 7 0.71 5 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGGGAGTGATGGGCCGGGAA..................................................................................................................... 20 3 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCGGGGAATC................................................................................................................... 19 3 5 0.60 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCCGGGAAT.................................................................................................................... 18 3 20 0.50 10 6 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TCGGGAGGGATGGGCTGGGAA..................................................................................................................... 21 3 4 0.50 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAGTGATGGGCGGGGAA..................................................................................................................... 20 3 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGGGATGGGCTGGGAAT.................................................................................................................... 18 2 6 0.50 3 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGGTGTGATGGGCGGGGAA..................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CTGGAGTGATGGGCGGGGAA..................................................................................................................... 20 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CGGGGAATAGCAAGGGGGCGGG...................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GGGAAAAGGAAGGAGGCTGGT..................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGAGATGGGCTGGGAA..................................................................................................................... 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CTTGGAGTGATGGGCGGGGAA..................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CTGGAGTGATGGGCGGGGA...................................................................................................................... 19 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGGGAGGGATGGGCTGGGAAT.................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCTGGGAACAGG................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATGGAGTGATGGGCTGGGA...................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCTGGGAATAG.................................................................................................................. 20 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCGGGGAA..................................................................................................................... 17 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TGAGTGATGGGCTGGGAA..................................................................................................................... 18 3 20 0.40 8 5 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGGATTGATGGGCGGGGAA..................................................................................................................... 19 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAGGGATGGGCTGGGAA..................................................................................................................... 20 3 6 0.33 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCTGGGAAGA................................................................................................................... 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CTGGAGAGATGGGCTGGGAA..................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CTGGAGTGATGGGCAGGGAA..................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TCGGGAGTGATGGGCGGGGAA..................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGGGAGTGATGGGCAGGGAA..................................................................................................................... 20 3 7 0.29 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CGGGAGGGATGGGCCGGGAA..................................................................................................................... 20 3 11 0.27 3 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCAGGGAA..................................................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGGGAGAGATGGGCGGGGAAT.................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CGGGAGGGATGGGCGGGGA...................................................................................................................... 19 2 8 0.25 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGAATTGAGATGCAAGC......................................................................................................................................................................................................................................... 18 3 20 0.25 5 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGGGAGTGATGGGCGGGGA...................................................................................................................... 19 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CGAGTGATGGGCTGGGAA..................................................................................................................... 18 3 20 0.25 5 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AGTGATGGGCGGGGAAT.................................................................................................................... 17 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCTCGGAA..................................................................................................................... 18 3 20 0.20 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGGAGTGATGGGCGGGGA...................................................................................................................... 18 2 20 0.20 4 1 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGCGATGGGCTGGGAA..................................................................................................................... 17 2 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGATGGGCTGGGAAATG.................................................................................................................. 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTGGAGTGATGGGCTGGGAA..................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ACGGAGTGATGGGCTGGGAA..................................................................................................................... 20 3 11 0.18 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GGCTCTATCTTGGGCAGAT.................................................................................................................................................................................................................................................................................... 19 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GGAAAAAAAAAGGGGGTGGGTA.................................................................................................... 22 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ACGGAGTGATGGGCGGGG....................................................................................................................... 18 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AGGGATGGGCCGGGAATAT.................................................................................................................. 19 3 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TAGGCGGGGAAAAAGAAG.............................................................................................................. 18 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CGGGAGGGATGGGCGGGG....................................................................................................................... 18 2 19 0.16 3 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AGTGATGGGCTGGGAATA................................................................................................................... 18 3 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CCGGAGGGATGGGCTGGGAA..................................................................................................................... 20 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TAGAGTGATGGGCTGGGAA..................................................................................................................... 19 3 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TGGGCGGGGAACAGGCATGG............................................................................................................ 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GGGGAGGGATGGGCGGGGAA..................................................................................................................... 20 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGGGATGGGCTGGGAATC................................................................................................................... 19 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGAGATGGGCCGGGAA..................................................................................................................... 17 2 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGCAGTGATGGGCGGGGAA..................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGTGAAGGGCGGGGAA..................................................................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AAGGAGAGATGGGCAGGGAA..................................................................................................................... 20 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCTGGGAACA................................................................................................................... 19 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CTGGAGTGATGGGCGGGG....................................................................................................................... 18 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAGGGCGGGGAAAAGTAA............................................................................................................... 18 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................GGAGGGAGGGGCCGGGAA..................................................................................................................... 18 2 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................GGGAAAAAGCAAGGGGGAGGG...................................................................................................... 21 3 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGGGAGGGATGGGCTGGG....................................................................................................................... 18 2 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................AGGAGTGATGGGCAGGGAA..................................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TATCGGGGAGATTCTTCAC.............................................................................................................................................................................................................. 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGGAGGGATGGGCGGGGGA..................................................................................................................... 19 2 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TATCAGGGGGATTCTTCAC.............................................................................................................................................................................................................. 19 3 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAGTGATGGGCGGGGA...................................................................................................................... 19 3 15 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TGATGGGCTGGGAAAAGGG................................................................................................................ 19 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCTGGGAAAG................................................................................................................... 19 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGAGACACATTCGCAACCT.................................................................................................................................................................................................................................. 19 3 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGAGAGATGGGCTGGGAAT.................................................................................................................... 19 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TCAGGGGGATTCTTCACC............................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AGCGATGGGCTGGGAA..................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAGTGATGGGCAGGGAAT.................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GGCGAGGGATGGGCGGGGAA..................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGGGAGAGATGGGCGGGGAA..................................................................................................................... 20 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:6916633-6916940 - dvi_18756 ATA-G-TTG----------------------A----GCAGG---CCGAAATAGAACCCGACCAAGTGGTGGACCATGCCAGGTTAATAT----CCTTAACTCTG------TGTT-------AG---------------CATTCGA-----------------------TATATCCCCCCTAAGAAGTCGGTT----ATTCT-------GGG-GT------GCCGCCCTCTGTTTGTGT-------TGT---CCACAA-CCTGTTCCATGGCGTGTGCCTACGGTT--ATAC-CTCCCTACCCGC-----------------------------------------------------CCCTTTTCC---TTCCCCCACCCATG-TTGTGGCCGTC---------------------------GCTTTAAC--TCGTATCATTTGAACT---------CTTTACAAA--T-----TCAGTTTTGTTTACAATTCACTGCAACATCG---CGACACTGGTAGGGAGCCAGAAA
droMoj3 scaffold_6680:5230604-5230897 - ATA-C-CTG----------------------A----ACAAT---CTGAACTAGAGTCCAATCAAGTGGTGGATAACGCCAGGTTAATATGCCTCAATCACTGTG------GG-------------------------------------CTCGCAATGAGCTCGA--TCCCAA----------G------------------------TCAAAT------TCCGTCCACTGTTTGTGT-----TTTGT---CTAAAT-CCCGATTC----------------T-G--A-ATTC-CCAGAATCCCCAACT------------------------------------G---GTT---AAGTCCTTTACTCCTTTCCCCTGATCCG-TTGTGGCTGTT----TC-----TCTC------------TCTTTAA---------------TGC-----GTCTCTTTTACAAA--T-----CCAGTTTTGTTTACAATTCACTACAACGTCGTCGCGATGCTGGCAATGAGATCGAGG
droGri2 scaffold_15110:5893006-5893303 + ATG-A-ATG--------------------------ACCAAA---TTGAGACAGAACCCAACGAAATAGTGGATCATGCCAGGTTAATATACACG--CAACTCTG------TGTT-------AC---------------CATTCCA----TTCGTAA-----------------TCCACCAAAAAAAAAAGTGCCAAATCCACAAGTG-AAATTCAGTT--CAAAACTCTTGTTGGTGTTATATGTTGT------------TG--------------------AGT--C-TGAC-TTC----------------------TGTCTGGCAGCGGGACAACTGCTCG------------------------------------------ATGGCTGTC----TCCTAACTCTG------------TCTCA------------ATTTCAACT-------CTTTTTACAAG--T-----GCAGTTTTGTTTACAACTCACTGCAACATCG---CGACAGTGGCAG---GCCAGAGA
droWil2 scf2_1100000004822:3365044-3365108 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTATAAA--T-----TCAGTTTTGTTTACAATTCACTGCGACATCC---CGTCGCTCATAGGCAGCCAGAAA
dp5 XR_group6:13124377-13124640 - ATA-TGTTG----------------------A------------------------GCGATCCGACACAGGATACAACCAGGTTAATAT----TATTGGCCATC------GGCTGCGGGCTGTGGCCTGTGGCCTGTG--GG---CTGCGTGGTAG---CATCCA--TCCCAT---------------------------------------------------CCCTCTGTTGATGT-------TGT---CCGAAC-CTC---------------------CG---A-AC-CTCCGTACTCCCCCTCC------------------------------------G---ATCAGCAGCTGCTCCAC----------------T-TGA---CCACA---TT------CCTCT----------------CA--------------CTGAT----CTGTATTTTATGTA--T-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTTGCCGCTAGGCCACCCGAAA
droPer2 scaffold_88:150675-150938 - ATA-TGTTG----------------------A------------------------GCGATCCGACACAGGATACAACCAGGTTAATAT----TATTGGCCATC------GGCTGCGGGCTGTGGCCTGTGGCCTGTG--GG---CTGCGTGGTAG---CATCCA--TCCCAT---------------------------------------------------CCCTCTGTTGATGT-------TGT---CCGAAC-CTC---------------------CG---A-AC-CTCCGTACTCCCCCTCC------------------------------------G---ATCAGCAGCTGCTCCAC----------------T-TGT---CCACA---TT------CCTCT----------------CA--------------CTGAT----CTGTATTTTATGTA--T-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTTGCCGCTAGGCCACCCGAAA
droAna3 scaffold_13337:14235291-14235569 + ATGGT-----------------------------GGCCCAGAGCCAGAACCAGATCCCGATCCAGCTGTGGACAATGCCAGGTTAATAT----T---TGTTTAG------TG----------------------------GTCCA----TGTGTAG---CTCCCAGTTCCTGC----------T---C------------------CCGATCCC----TCCTGGCCTTCTGTCTGTGT-------TGT---CTGAGC-CCC---------------------AG------TCC-TTACAC---------CAATTGATTGTACTTCTCGGCGGGGCATTCGCGTG---------------------C----------------T-CTCCAACCACC---------------------------TCTCTA---------------ATGCT----CTGTCTCTTCTGACCAC-----TCAGTTTTGTTTACAATTCTCTGCGACATCG---TGTCGCCGTTAGGCAGCCCGAAA
droBip1 scf7180000396641:1051198-1051483 - ATG--------------------------------GTCCACAACCAGAACCAGAACCCGATCCAGCTGTGGACAATGCCAGGTTAATAT----T---TGTTTAG------TG----------------------------GTCCAGTGTTTAGTAG---CTCCCC--AGCTCC----------T------------------------GACCTC------CTGCCCTTCTGTCTGTGT-----GTTGTCGTCTGTGC-CCCGAATC------------CA--AATCAA-GTCC-TTCCAC---------CAATCGGCTGTATTTCTCAGCGGGGC-----------------------------------------------------------A---TT------CTTCCCACCAAAAAGCTT-CTAA---------------TCCT----CTGTCTCTTCTGACCAC-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCGTTAGGCAGCCCGAAA
droKik1 scf7180000302351:381665-381937 - GCA-A-CCGTATCAGCCATGTGGAGCTATTAGCTGGTCAAGAAGACGTTTATAACGAAGATCCCACAGTGGCTCACAACAGGTTAATATTTCTCATTCGCCAGG------CA-----------------------------------------------------------AA----------A------------------------CATTCCACTTCTAAAATCCTGTGTCCGTAA-------TGT---CCGTTT-CCCC--------------------AAT--A-AGAA-TTTCAT-----------------------------------------ACGCTACC---CAAAT--------C----------------T-AAGCAGATAGCCATTT------CTTCC----TAATATTCC-CTAA---------------TAT-----------------TC--C-----TCAGTTTTGTTTACAATTCCCTGCAACACCG---TGTTGGTCATAGGCCACCTGAGG
droFic1 scf7180000454107:1102237-1102513 + ACG--------------------------------GTCAAGAGGCCGCAC---AAACCGATCCCACAGTGGACCACACCAGGTTAATAT----CATTCGCCAAG------CG-------------------------------------TTAGCAGCCAAACCCA--TCCAAA----------C---C--------------------GATTCC----CCTCTGTCCTCTGTCGGTGT-----TTTGT---CCGTGACCCG-A-------------------AAC--A-AGAC-TCCCAC---------------------------------------------TCCC---CGAGGCGCCTTCAC----------------T-TCGCAGCCAGC---------------------------CTTCTAAC--CGCCATCCGTTGTGCT----CTATCTTCCATGAACCCCATGAACAGTTTCGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAA
droEle1 scf7180000490993:457863-458116 + ATG--------------------------------GCCAAGCGGGCGAAC---AGGCAGCTCCACCAGTGGACCATACCAGGTTAATAT----CATCCGCTAAG------CG----------------------------------------------------A--TCAAAC----------C------------------------GATCCCCCCT--CTCGCCTTCTGTCGGTAC-----TTCGT---CCGAAC-CCA---------------------AAC--G-ATCC-CCACAC---------------------------------------------CTCC---CGAGGCTCCTCAAC----------------T-TCGCAGCCAGC---------------------------TTCCTAAC--CGCCATCCGTTGTGCT----CTATCTTTCATGAA--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAGA
droRho1 scf7180000779956:216941-217204 + AAA-T-----------------------------GGCCAAGAGGGCGTAC---AGACAGATCCAACAGTGCAACATACCAGGTTAATAT----CATTCGCTAAG------CG-------------------------------------TTAGCAG---CTTCCA--TCCAAA----------A---C--------------------GATCCC------CAAGCCTCCTGTCGGTAT-----TTTGT---CCGTAC-CCA---------------------AA---A-AGAA-ACCCAC---------------------------------------------TTCC---CGAGGCTCCTTCAC----------------T-TCGCAGCCAGC---------------------------TTCTTAAT--CGCCATCCGTTGTGCT----CTATCTTTCATGAA--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---CGTCGCCCATAGGCAGCCCGAAA
droBia1 scf7180000302193:829598-829876 + ATG-T--TG----------------------CACGGCCCAGAGGGCGTCC---AGACGGACCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCTAAGCCTTGGCG-------------------------------------CTAGCCA---CTCCCA--TCCAAA----------C---C--------------------GATCCC----ACCCAGCCTTCTGTCGGTAC-----TCTGT---CCGATC-CCA---------------------AAA--G-ATCC-CTCCGA---------------------------------------------TCCCC--CAAGGCTCCTTCAC----------------T-TCGCAGCCAGC---------------------------TGCCTAAT--CGCCATCCGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAGA
droTak1 scf7180000415409:288625-288890 + ATG-T--TA----------------------AATGGCCCAGAGGGACTGCCCCAAACAGACCCAACCGTGGACCATACCAGGTTAATAT----CATCCGCCAAG------CG-------------------------------------TTAGTCG---CACCCA--TCCAAA----------C----------------------------------------CCCTCTGTCGGTAT-----TTTGT---CCGTAC-CCA---------------------AAC--G-ATCC-TCCCGA---------------------------------------------TTCC---CAAGGCTCCCTCAC----------------T-TCGCAGCCAGC---------------------------TTCTTAAT--CGCCATCCGTTGTGCTCTATCTATCTTTCATGAC--C-----CCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAA
droEug1 scf7180000409471:2034804-2035085 - AGC----CA---------CATGGCCCTGT-----TG-CAAGAGGGCGAAC---AGGCTGATCCAACATTGGACCATACAAGGTTAATAT----CATACGCTAAA------TA-------------------------------------TTAGCAA---AACCCA--TCCAAA----------A--CC--------------------GATCCA-----AACAGCCTTCTATCGGTAC-----TTTTT---CCGAAC-CCT---------------------AAA--G-ATCC-TTCCAA---------------------------------------------TCCCCT-TAAGGCTCCTTCAC----------------T-TCGCAGCCAGC---------------------------TTCCTAATCTCGCCAACCGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAACCCGAAA
dm3 chr3L:17535440-17535700 + ATA-T-----------------------------CGCGCAGAGGAAGATC------AAGATCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCTATG------CG-------------------------------------CTAGCAG---CACCCA--TCCAAA----------A------------------------GATCCC------TCAGCCTTTTGTCGGTAT-----TTTGT---CCGTAC-CCG---------------------AAC--A-ATCC-TCCCAA---------------------------------------------CCCC---CAAGGCTCCTTCAC----------------T-TCGCAGCCAGC---------------------------TTCCTAAC--CGCCATACGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAA
droSim2 3l:17124014-17124281 + dsi_8045 AAA-T-----------------------------CGCGGAGAGGAAGATCAAGATCAAGATCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCCATG------CG-------------------------------------CTAGCAG---CACCCA--TCCAAT----------A------------------------GATCCC------TCAGCCTTTTGTCGGTAT-----CTTGT---CCGTAC-CCG---------------------AAT--A-ATCC-TCCCAA---------------------------------------------TCCC---CAAGGCTCCTTCAC----------------TTTCGCAGCCAGC---------------------------TTCCTAAC--CGCCATACGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAA
droSec2 scaffold_0:9579846-9580113 + AAA-T-----------------------------CGCGCAGAGGAAGATCAAGATCAAGATCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCCATG------CG-------------------------------------CTAGCAG---CACCCA--TCCAAT----------A------------------------GATCCC------CCAGCCTTTTGTCGGTAT-----CTTGT---CCGTAA-CCG---------------------AAT--A-ATCC-TCCCAA---------------------------------------------TCCC---CAAGGCTCCTTCAC----------------TTTCGCAGCCAGC---------------------------TTCCTAAC--CGCCTTACGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAA
droYak3 3L:16537154-16537415 - dya_810 ATG--------------------------------GCGCCGAGGAAGATC---AGACAGATCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCTATG------CG-------------------------------------TTAGCAG---CACCCA--TCCAAA----------A------------------------GATCCC------TCAGCCTCTTGTCGGTAT-----TTTGT---CCGTAC-CCA---------------------AAC--A-ATCC-TCCCAA---------------------------------------------CCCC---CAAGGCTCCTCCAC----------------T-TCGCAGCCAGC---------------------------TTCCTAAC--CGTCAAACGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAA
droEre2 scaffold_4784:16319170-16319439 - AAA-TGC---------------GCCAT--T----CGTCAAGA--CAGATC---AGACAGATCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCTATG------CG-------------------------------------TTAGCAG---CACCCA--TCCAAA----------A------------------------GATCCC------TCAGCCTTTTGTCGGTAT-----TTTGT---CCGTAC-CCA---------------------AAC--A-ATCC-TCCCAA---------------------------------------------CCCC---CAAGGCTCCTTCAC----------------T-TCGCAGCCAGC---------------------------TTCCTAAT--CGCCATACGTTGTGCT----CTATCTTTCATGAA--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATA-G-TTG----------------------A----GCAGG---CCGAAATAGAACCCGACCAAGTGGTGGACCATGCCAGGTTAATAT----CCTTAACTCTG------TGTT-------AG---------------CATTCGA-----------------------TATATCCCCCCTAAGAAGTCGGTT----ATTCT-------GGG-GT------GCCGCCCTCTGTTTGTGT-------TGT---CCACAA-CCTGTTCCATGGCGTGTGCCTACGGTT--ATAC-CTCCCTACCCGC-----------------------------------------------------CCCTTTTCC---TTCCCCCACCCATG-TTGTGGCCGTC---------------------------GCTTTAAC--TCGTATCATTTGAACT---------CTTTACAAA--T-----TCAGTTTTGTTTACAATTCACTGCAACATCG---CGACACTGGTAGGGAGCCAGAAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................AAGTCGGTT----ATTCT-------GGG-GT------GC.....................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................GTT----ATTCT-------GGG-GT------GCCGCCCTCTGT...........................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................................................AATAGAACCCGACCAAGTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACATCG---CGACACTGGTAG...........2111.001000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AA-CCTGTTCCATGGCGTGT................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
...................................................................................TAATAT----CCTTAACTCTG------TGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--TCGTATCATTTGAACT---------CTTTACAAA--T-----TCAGTTTTGTT..............................................4011.001000000000000000000000000000000000000000000000000000001000000000
..........................................................GACCAAGTGGTGGACCATGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................CAAGTGGTGGACCATGCCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
.............................................CGAAATAGAACCCGACCAAGTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
ATA-C-CTG----------------------A----ACAAT---CTGAACTAGAGTCCAATCAAGTGGTGGATAACGCCAGGTTAATATGCCTCAATCACTGTG------GG-------------------------------------CTCGCAATGAGCTCGA--TCCCAA----------G------------------------TCAAAT------TCCGTCCACTGTTTGTGT-----TTTGT---CTAAAT-CCCGATTC----------------T-G--A-ATTC-CCAGAATCCCCAACT------------------------------------G---GTT---AAGTCCTTTACTCCTTTCCCCTGATCCG-TTGTGGCTGTT----TC-----TCTC------------TCTTTAA---------------TGC-----GTCTCTTTTACAAA--T-----CCAGTTTTGTTTACAATTCACTACAACGTCGTCGCGATGCTGGCAATGAGATCGAGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................AT---CTGAACTAGAGTCCAATCAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
droGri2
ATG-A-ATG--------------------------ACCAAA---TTGAGACAGAACCCAACGAAATAGTGGATCATGCCAGGTTAATATACACG--CAACTCTG------TGTT-------AC---------------CATTCCA----TTCGTAA-----------------TCCACCAAAAAAAAAAGTGCCAAATCCACAAGTG-AAATTCAGTT--CAAAACTCTTGTTGGTGTTATATGTTGT------------TG--------------------AGT--C-TGAC-TTC----------------------TGTCTGGCAGCGGGACAACTGCTCG------------------------------------------ATGGCTGTC----TCCTAACTCTG------------TCTCA------------ATTTCAACT-------CTTTTTACAAG--T-----GCAGTTTTGTTTACAACTCACTGCAACATCG---CGACAGTGGCAG---GCCAGAGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTATAAA--T-----TCAGTTTTGTTTACAATTCACTGCGACATCC---CGTCGCTCATAGGCAGCCAGAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTACAATTCACTGCGAC..............................1911.00110000
dp5
ATA-TGTTG----------------------A------------------------GCGATCCGACACAGGATACAACCAGGTTAATAT----TATTGGCCATC------GGCTGCGGGCTGTGGCCTGTGGCCTGTG--GG---CTGCGTGGTAG---CATCCA--TCCCAT---------------------------------------------------CCCTCTGTTGATGT-------TGT---CCGAAC-CTC---------------------CG---A-AC-CTCCGTACTCCCCCTCC------------------------------------G---ATCAGCAGCTGCTCCAC----------------T-TGA---CCACA---TT------CCTCT----------------CA--------------CTGAT----CTGTATTTTATGTA--T-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTTGCCGCTAGGCCACCCGAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCC---TGTTGCCGCTAGGC.........2112.0020200000000
.....GTTG----------------------A------------------------GCGATCCGACACAGGATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
droPer2
ATA-TGTTG----------------------A------------------------GCGATCCGACACAGGATACAACCAGGTTAATAT----TATTGGCCATC------GGCTGCGGGCTGTGGCCTGTGGCCTGTG--GG---CTGCGTGGTAG---CATCCA--TCCCAT---------------------------------------------------CCCTCTGTTGATGT-------TGT---CCGAAC-CTC---------------------CG---A-AC-CTCCGTACTCCCCCTCC------------------------------------G---ATCAGCAGCTGCTCCAC----------------T-TGT---CCACA---TT------CCTCT----------------CA--------------CTGAT----CTGTATTTTATGTA--T-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTTGCCGCTAGGCCACCCGAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....GTTG----------------------A------------------------GCGATCCGACACAGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droAna3
ATGGT-----------------------------GGCCCAGAGCCAGAACCAGATCCCGATCCAGCTGTGGACAATGCCAGGTTAATAT----T---TGTTTAG------TG----------------------------GTCCA----TGTGTAG---CTCCCAGTTCCTGC----------T---C------------------CCGATCCC----TCCTGGCCTTCTGTCTGTGT-------TGT---CTGAGC-CCC---------------------AG------TCC-TTACAC---------CAATTGATTGTACTTCTCGGCGGGGCATTCGCGTG---------------------C----------------T-CTCCAACCACC---------------------------TCTCTA---------------ATGCT----CTGTCTCTTCTGACCAC-----TCAGTTTTGTTTACAATTCTCTGCGACATCG---TGTCGCCGTTAGGCAGCCCGAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................CCAGAACCAGATCCCGATCCAGCTGTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
.............................................AGAACCAGATCCCGATCCAGCTGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTACAATTCTCTGCGAC..............................2011.001010000
droBip1
ATG--------------------------------GTCCACAACCAGAACCAGAACCCGATCCAGCTGTGGACAATGCCAGGTTAATAT----T---TGTTTAG------TG----------------------------GTCCAGTGTTTAGTAG---CTCCCC--AGCTCC----------T------------------------GACCTC------CTGCCCTTCTGTCTGTGT-----GTTGTCGTCTGTGC-CCCGAATC------------CA--AATCAA-GTCC-TTCCAC---------CAATCGGCTGTATTTCTCAGCGGGGC-----------------------------------------------------------A---TT------CTTCCCACCAAAAAGCTT-CTAA---------------TCCT----CTGTCTCTTCTGACCAC-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCGTTAGGCAGCCCGAAASizeHit CountTotal NormTotal
No Reads
droKik1
GCA-A-CCGTATCAGCCATGTGGAGCTATTAGCTGGTCAAGAAGACGTTTATAACGAAGATCCCACAGTGGCTCACAACAGGTTAATATTTCTCATTCGCCAGG------CA-----------------------------------------------------------AA----------A------------------------CATTCCACTTCTAAAATCCTGTGTCCGTAA-------TGT---CCGTTT-CCCC--------------------AAT--A-AGAA-TTTCAT-----------------------------------------ACGCTACC---CAAAT--------C----------------T-AAGCAGATAGCCATTT------CTTCC----TAATATTCC-CTAA---------------TAT-----------------TC--C-----TCAGTTTTGTTTACAATTCCCTGCAACACCG---TGTTGGTCATAGGCCACCTGAGGSizeHit CountTotal NormTotal
No Reads
droFic1
ACG--------------------------------GTCAAGAGGCCGCAC---AAACCGATCCCACAGTGGACCACACCAGGTTAATAT----CATTCGCCAAG------CG-------------------------------------TTAGCAGCCAAACCCA--TCCAAA----------C---C--------------------GATTCC----CCTCTGTCCTCTGTCGGTGT-----TTTGT---CCGTGACCCG-A-------------------AAC--A-AGAC-TCCCAC---------------------------------------------TCCC---CGAGGCGCCTTCAC----------------T-TCGCAGCCAGC---------------------------CTTCTAAC--CGCCATCCGTTGTGCT----CTATCTTCCATGAACCCCATGAACAGTTTCGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAASizeHit CountTotal NormTotal
No Reads
droEle1
ATG--------------------------------GCCAAGCGGGCGAAC---AGGCAGCTCCACCAGTGGACCATACCAGGTTAATAT----CATCCGCTAAG------CG----------------------------------------------------A--TCAAAC----------C------------------------GATCCCCCCT--CTCGCCTTCTGTCGGTAC-----TTCGT---CCGAAC-CCA---------------------AAC--G-ATCC-CCACAC---------------------------------------------CTCC---CGAGGCTCCTCAAC----------------T-TCGCAGCCAGC---------------------------TTCCTAAC--CGCCATCCGTTGTGCT----CTATCTTTCATGAA--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAGASizeHit CountTotal NormTotal
No Reads
droRho1
AAA-T-----------------------------GGCCAAGAGGGCGTAC---AGACAGATCCAACAGTGCAACATACCAGGTTAATAT----CATTCGCTAAG------CG-------------------------------------TTAGCAG---CTTCCA--TCCAAA----------A---C--------------------GATCCC------CAAGCCTCCTGTCGGTAT-----TTTGT---CCGTAC-CCA---------------------AA---A-AGAA-ACCCAC---------------------------------------------TTCC---CGAGGCTCCTTCAC----------------T-TCGCAGCCAGC---------------------------TTCTTAAT--CGCCATCCGTTGTGCT----CTATCTTTCATGAA--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---CGTCGCCCATAGGCAGCCCGAAASizeHit CountTotal NormTotal
No Reads
droBia1
ATG-T--TG----------------------CACGGCCCAGAGGGCGTCC---AGACGGACCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCTAAGCCTTGGCG-------------------------------------CTAGCCA---CTCCCA--TCCAAA----------C---C--------------------GATCCC----ACCCAGCCTTCTGTCGGTAC-----TCTGT---CCGATC-CCA---------------------AAA--G-ATCC-CTCCGA---------------------------------------------TCCCC--CAAGGCTCCTTCAC----------------T-TCGCAGCCAGC---------------------------TGCCTAAT--CGCCATCCGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAGASizeHit CountTotal NormTotal
No Reads
droTak1
ATG-T--TA----------------------AATGGCCCAGAGGGACTGCCCCAAACAGACCCAACCGTGGACCATACCAGGTTAATAT----CATCCGCCAAG------CG-------------------------------------TTAGTCG---CACCCA--TCCAAA----------C----------------------------------------CCCTCTGTCGGTAT-----TTTGT---CCGTAC-CCA---------------------AAC--G-ATCC-TCCCGA---------------------------------------------TTCC---CAAGGCTCCCTCAC----------------T-TCGCAGCCAGC---------------------------TTCTTAAT--CGCCATCCGTTGTGCTCTATCTATCTTTCATGAC--C-----CCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAASizeHit CountTotal NormTotal
No Reads
droEug1
AGC----CA---------CATGGCCCTGT-----TG-CAAGAGGGCGAAC---AGGCTGATCCAACATTGGACCATACAAGGTTAATAT----CATACGCTAAA------TA-------------------------------------TTAGCAA---AACCCA--TCCAAA----------A--CC--------------------GATCCA-----AACAGCCTTCTATCGGTAC-----TTTTT---CCGAAC-CCT---------------------AAA--G-ATCC-TTCCAA---------------------------------------------TCCCCT-TAAGGCTCCTTCAC----------------T-TCGCAGCCAGC---------------------------TTCCTAATCTCGCCAACCGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAACCCGAAASizeHit CountTotal NormTotal
No Reads
dm3
ATA-T-----------------------------CGCGCAGAGGAAGATC------AAGATCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCTATG------CG-------------------------------------CTAGCAG---CACCCA--TCCAAA----------A------------------------GATCCC------TCAGCCTTTTGTCGGTAT-----TTTGT---CCGTAC-CCG---------------------AAC--A-ATCC-TCCCAA---------------------------------------------CCCC---CAAGGCTCCTTCAC----------------T-TCGCAGCCAGC---------------------------TTCCTAAC--CGCCATACGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................GCGCAGAGGAAGATC------AAGATCCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................AGAGGAAGATC------AAGATCCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..A-T-----------------------------CGCGCAGAGGAAGATC------AAGATCCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000
..A-T-----------------------------CGCGCAGAGGAAGATC------A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
.TA-T-----------------------------CGCGCAGAGGAAGATC------AAGATCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..............................................GATC------AAGATCCAACAGTGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.............................................AGATC------AAGATCCAACAGTGGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCCTGCGACATCC---TGT....................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TA-T-----------------------------CGCGCAGAGGAAGATC------AAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................CAGAGGAAGATC------AAGATCCAACAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATA-T-----------------------------CGCGCAGAGGAAGATC------AAGATCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.TA-T-----------------------------CGCGCAGAGGAAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ATC------AAGATCCAACAGTGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CGCGCAGAGGAAGATC------AAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GATC------AAGATCCAACAGTGGACCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................AAGATC------AAGATCCAACAGTGGACCATAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................GCCTTTTGTCGGTAT-----TTTGT---CCG.....................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................CGCAGAGGAAGATC------AAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAA-T-----------------------------CGCGGAGAGGAAGATCAAGATCAAGATCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCCATG------CG-------------------------------------CTAGCAG---CACCCA--TCCAAT----------A------------------------GATCCC------TCAGCCTTTTGTCGGTAT-----CTTGT---CCGTAC-CCG---------------------AAT--A-ATCC-TCCCAA---------------------------------------------TCCC---CAAGGCTCCTTCAC----------------TTTCGCAGCCAGC---------------------------TTCCTAAC--CGCCATACGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................ATCAAGATCAAGATCCAACAGTGGACCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
....................................................GATCAAGATCCAACAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
....................................................GATCAAGATCCAACAGTGGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.....................................................ATCAAGATCCAACAGTGGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
............................................................................................................................................................................................................................................AT-----CTTGT---CCGTAC-CCG---------------------AAT--A-A.................................................................................................................................................................................................................................................2111.00100000010000000000
droSec2
AAA-T-----------------------------CGCGCAGAGGAAGATCAAGATCAAGATCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCCATG------CG-------------------------------------CTAGCAG---CACCCA--TCCAAT----------A------------------------GATCCC------CCAGCCTTTTGTCGGTAT-----CTTGT---CCGTAA-CCG---------------------AAT--A-ATCC-TCCCAA---------------------------------------------TCCC---CAAGGCTCCTTCAC----------------TTTCGCAGCCAGC---------------------------TTCCTAAC--CGCCTTACGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................CGCAGAGGAAGATCAAGATCAAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
....................................................GATCAAGATCCAACAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
droYak3
ATG--------------------------------GCGCCGAGGAAGATC---AGACAGATCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCTATG------CG-------------------------------------TTAGCAG---CACCCA--TCCAAA----------A------------------------GATCCC------TCAGCCTCTTGTCGGTAT-----TTTGT---CCGTAC-CCA---------------------AAC--A-ATCC-TCCCAA---------------------------------------------CCCC---CAAGGCTCCTCCAC----------------T-TCGCAGCCAGC---------------------------TTCCTAAC--CGTCAAACGTTGTGCT----CTATCTTTCATGAC--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................C---AGACAGATCCAACAGTGGACCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCCCTGCGACATCC---TGTC...................2111.00101000000000
.TG--------------------------------GCGCCGAGGAAGATC---AGACAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
droEre2
AAA-TGC---------------GCCAT--T----CGTCAAGA--CAGATC---AGACAGATCCAACAGTGGACCATACCAGGTTAATAT----CATCCGCTATG------CG-------------------------------------TTAGCAG---CACCCA--TCCAAA----------A------------------------GATCCC------TCAGCCTTTTGTCGGTAT-----TTTGT---CCGTAC-CCA---------------------AAC--A-ATCC-TCCCAA---------------------------------------------CCCC---CAAGGCTCCTTCAC----------------T-TCGCAGCCAGC---------------------------TTCCTAAT--CGCCATACGTTGTGCT----CTATCTTTCATGAA--C-----TCAGTTTTGTTTACAATTCCCTGCGACATCC---TGTCGCCCATAGGCAGCCCGAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................C---AGACAGATCCAACAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..........................................................GATCCAACAGTGGACCATACCAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
................................................................................................................................................................................................................GATCCC------TCAGCCTTTTGTCGGT.......................................................................................................................................................................................................................................................................................................2211.0011000000

Generated: 05/16/2015 at 09:25 PM