ID:

dvi_18665

 Coordinate:

scaffold_13049:6458789-6458972 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ13073-cds]; CDS [Dvir\GJ13073-cds]; exon [dvir_GLEANR_12993:10]; exon [dvir_GLEANR_12993:11]; intron [Dvir\GJ13073-in]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AACCAGTACTAACCCAGAGCCACAGCCTCAAGCAGCTATGGATGCGACAGGTAGGTGCAGCTTTTACAAAATACGTTGCCTACTTTTAAGAGCGCCACATGAAAATGCATTGCCTACTTTCAAACGCAGCCTCAAACTAAACATCAAATTTGCTGCCGTTGCACACTTCTCAGCGCCATCGAAAAAAGCCCGTTCCCCAAATTTAAAAGTCATTTTCTCTTTTTGATCACATAGATCTGGAGGACAAGGAAATGTTAATGCAGCTGAAACGCGATCATACAGTC
**************************************************((((..(((((.............)))))))))........((((.....(((..((((.((.............(((((.....................))))))).))))...)))...)))).((((((((.((............................)).)))))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060667
160_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 M027
male body		 V116
male body		 GSM1528803
follicle cells		 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060679
140x9_testes_total
 V047
embryo
 SRR060662
9x160_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060681
Argx9_testes_total
 M061
embryo
 SRR060676
9xArg_ovaries_total
 SRR060683
160_testes_total
 SRR060689
160x9_testes_total
 SRR1106728
larvae
 V053
head
.....................................ATGGATGCGACCATTAGGT.................................................................................................................................................................................................................................... 19 3 12 21.92 263 16 0 83 60 0 0 25 0 22 15 5 4 0 0 0 0 0 0 9 6 4 3 3 2 1 1 1 1 1 1
.............................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACG............. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.ACCAGTACTAACCCAGAGCCACAGCC................................................................................................................................................................................................................................................................. 26 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AGTACTAACCCAGAGCCACAGCCTCA.............................................................................................................................................................................................................................................................. 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACGCG........... 20 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................AATGTTAATGCAGCTGAAACGCGAT......... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CTCAAGCAGCTATAGATGAGACAGAT........................................................................................................................................................................................................................................ 26 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TGTTAATGCAGCTGAAACGCGATC........ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................GCAGCTGAAACGCGATCAT...... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................AATGCAGCTGAAACGCGAT......... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CAGAGCCACAGCCTCAAGCAGCTATG.................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................GCAGCTGAAACGCGATCA....... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................CAAGGAAATGTTAATGCAGCT................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................TGCAGCTGAAACGCGATCA....... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GTACTAACCCAGAGCCACAGCCTCAAG............................................................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CAGATCTGGAGGACAAGGA.................................. 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................TGCAGCTGAAACGCGATCATAC.... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...CAGTACTAACCCAGAGCCACA.................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................TAATGCAGCTGAAACGCGATC........ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TACTAACCCAGAGCCACAG................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GACAGATCTGGAGGACAAGGAAATGT............................. 26 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACGC............ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................AATGTTAATGCAGCTGAAACGCGATCA....... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................TTAATGCAGCTGAAACGCG........... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................TTGTTAATGCAGCTGAAACGCGATC........ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................TGGAGGACAAGGAAATCTTAATGC....................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........AACCCAGAGCCACAGCCTCAAGCAGC........................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ACAGCCTCAAGCAGCTATGGATGC............................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................AGCCACAGCCTCAAGCAGCTAT..................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................CTGGAGGACAAGGAAATG.............................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................ATCTGGAGGACAAGGAAAT............................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................GGACAAGGAAATGTTAATGCAGCTGAA................ 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GTACTAACCCAGAGCCACAGCC................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TCAAGCAGCTATGGATGCGACAGAT........................................................................................................................................................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......ACTAACCCAGAGCCACAACCT................................................................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CAGAGCCACAGCCTCAAGCA.......................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ACCCAGAGCCACAGCCTCAAGC........................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................GCTGAAACGCGATCATACA... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................ACAGATCTGGAGGACAAG.................................... 18 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TATGGATGCGACCATTAGGT.................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GCTTTGGATGCGAGAGGTA....................................................................................................................................................................................................................................... 19 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................ATGGATGCGACCTTTAGGT.................................................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CAGCTTTTACAGGATAGGT................................................................................................................................................................................................................ 19 3 15 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTGGTCATGATTGGGTCTCGGTGTCGGAGTTCGTCGATACCTACGCTGTCCATCCACGTCGAAAATGTTTTATGCAACGGATGAAAATTCTCGCGGTGTACTTTTACGTAACGGATGAAAGTTTGCGTCGGAGTTTGATTTGTAGTTTAAACGACGGCAACGTGTGAAGAGTCGCGGTAGCTTTTTTCGGGCAAGGGGTTTAAATTTTCAGTAAAAGAGAAAAACTAGTGTATCTAGACCTCCTGTTCCTTTACAATTACGTCGACTTTGCGCTAGTATGTCAG
**************************************************((((..(((((.............)))))))))........((((.....(((..((((.((.............(((((.....................))))))).))))...)))...)))).((((((((.((............................)).)))))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 SRR060686
Argx9_0-2h_embryos_total
 SRR060678
9x140_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060679
140x9_testes_total
 SRR060687
9_0-2h_embryos_total
 V053
head
......................................................................................................................................................................................TCTTTCGTGCAAGGGGTTTA.................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0
................CTAGGTGTCGGAGTTCGTCCAT...................................................................................................................................................................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................TAATGGATGAAAGTGTGC.............................................................................................................................................................. 18 2 5 0.20 1 0 0 1 0 0 0 0 0
............................GTTAGTCGATACCTATGCGGT........................................................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 0 1 0 0 0 0
...................................................................................AAAATTCTCGTGGACTACTT..................................................................................................................................................................................... 20 3 12 0.17 2 0 2 0 0 0 0 0 0
...........................................................................................................CTAATGGATGAAAGTGTGC.............................................................................................................................................................. 19 3 15 0.13 2 0 0 0 0 0 1 1 0
...............................................................................................................................................................................................................TCACTAAAAGAGAAAATGTAG........................................................ 21 3 8 0.13 1 0 1 0 0 0 0 0 0
................CTCGGTGCCGGAGGGCGTC......................................................................................................................................................................................................................................................... 19 3 15 0.07 1 0 0 0 0 1 0 0 0
...................................................................................................................................................................................GCTTTTTTCTAGCATGGGGTT.................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:6458739-6459022 + dvi_18665 AACCAGTACTAACCCAGAGCCACAGCC---------TCA---AGCAGCTATGGAT---GCGACAGGTAGGT-GCAGC-T-------------TTTAC-AAAA----------------TAC------------------GTTGCCTA-------------CTTTTAAGAGC---GCCACATG---------A----------------AAATGCATTGCCTACTTTCAAACGCAGCCTCAA-------ACTAAACATCAAATT----TGCTGCCGTTGCACACTTCTCAGCGCCATC-G-AA-A-----------------AAAGCCCGTTCCCCA--AATTTA-------------AAAGTCATTT--TC-T--CTTTTT--GA---------T--CACATAGATCTGG------AGG---ACAAGGAA------------ATGTTAATGCAGCTGAAACGCGATCATACAGTC
droMoj3 scaffold_6680:4773091-4773255 + AACCAGTACTAACCAAGAGCCTC---C---------AA------CAGCCATGGAA---GCAACAGGTAGGT-GCAGC-T-------------T--------------------------CTAT----TTG--------AACTAAAAAAAATTGTAGCATACTTTTCAGAGCC--GCAAAAAGCCAGCGCTTCTCA--CATTCTATATCAAATATG------------------------------------------------------------TTGCATACTTTCAAGCGCTGC--A----------------------------------------------------------------------------------------------------------------------------------------------------------AATAAA----------------
droGri2 scaffold_9452:2794-3065 + AACCAGTACTAACCCAGAACTACCACAACAGTTGCCTCCACTACAAGCTATGGAT---ACAACAGGTAGGT-TTTT----T-----------AAGCTTT-----------------------------------------CAGCGAG---------------------------------AA-----------------------------ATTGTTGCATGCTTTCAGGCGCTGCCACAA-------AATCC--ATCATTTTACTCGT-CGCTGTTGCATTCTTTTCTGTGTCATTCG-AA-A--CAA-AAC---A--GATGT------ATTCTA--GCTTCTAT-----------------------TG-A--CAATTT--GCACT-TTTTGT---ACACAGATCTGGA------GG---ATAAGGAA------------ATGCTAATGCAACTGAAACGTGATCATACCGTC
droWil2 scf2_1100000004511:8053470-8053720 - dwi_648 AACCAGTACTAACCCAGAGCAGACGCT---------GA------CGTCAACG------CAAACAGGTAAGGTG-CCAGCAGCC---------G--------------------------CTT-----------------------AG-----------------------T-TAATTAAAAA-----------------------------TGTGTTGCCTACTTTTATGTGTGTCATTTT-------CATACATTTTGC-----AAAAATTGTGTTGCCTACTTACAAAGCATA--------------------------TAA--------------ATG--------------------TTGTTCTC---TCACTTAATACATTTCCTCG--C--CCTTTAGATCTCGATAATGATGGCGATAAACAA------------TTGCTGCTGCAACTGAAACGTGATCACACTGTC
dp5 XR_group8:8798168-8798418 - AACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTG----------------------------------------------------------------------------------------------------------CCG-----------------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGACAT----GTCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---C-ATACCC--------CTAGGGATAA--------------GTG-TGCTATTACTATACAATTGTTGTTCTC---CC--------------------C--CACACAGATCTGGACAGCGAAG---GGAAGCAGCAACAGCAGCTGCTGCAGCTGCAGCTGAAGCGCGACCACACGGTC
droPer2 scaffold_50:408037-408287 + AACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTG----------------------------------------------------------------------------------------------------------CCG-----------------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGACAT----GTCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---C-ATACCC--------CCAGGGATAA--------------GTG-TGCTATTACTATACAATTGTTGTTCTC---CC--------------------C--CACACAGATCTGGACAGCGAGG---GGAAGCAGCAACAACAGCTGCTGCAGCTGCAGCTGAAGCGCGACCACACGGTC
droAna3 scaffold_13337:7861381-7861645 - AACCACTACTAACCCAGAGCTGCTGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGA-CTC---------------------------------------GATCTCTCTC--------ACCTGTCCG-------------TT--------C-CTCTCACC-------------------------------TGTGTTGCATACTTTCGCGCATAGAAA----------CTCGAACATAGCATTGCGCCGGCGCCACTGCATACCTTTGAGAGCTTC--G-AT-C--TT--------------TA--------------ATTTTCTC-----------------------TA-A--TTTCTTTCAATTA-TTA--A--CTCACAGATGTAGAGAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAAAGGGACCACACTGTC
droBip1 scf7180000396541:15944-16208 - AACCACTACTAACACAGAGCTGCAGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGA-CGC-----------GATC----------------------TCTCT----CTC--------ACCTGTCCA-------------TA--------C-CTCTCACC-------------------------------TTTGTTGCATACTTTCGCGCATAGAAG----------CTCAATCATGGCATTGCGCCGGCGCCACTGCATACCTTTGAGGGCTCT--G-TA-C---TT------------TGA--------------TTT-TATT-----------------------TA-A--TTTTTT--CCTAA-TCA--A--CTCACAGATGTAGAAAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAACGGGACCACACTGTC
droKik1 scf7180000302474:176794-177095 - AACCAGTACTAACCCCGAGCTGCTGCC---------GC------GTCCCGTGGAT---CCGTCAGGTGGGT-CTAGC-C-------------ACTCC-TAAC----------------TCTCT----CTCTCTCTCCCTCTCACCTG-----------------------C---CTCACCTG---------TGTGTAT----ATTCTCACCTGTGTTGCATACTCTCAAGCGCCGCCAGGT-------CAACCACATTGCATTGCGTCTGCGCCGCTGCATACTTTTGAGTGCCGTTTC-AA-A---AAAGAATTTAGAATTAA--------------ATG-TAAAGTTTCTATCCAA------------------------------------T--CCCTCAGATCTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTTCAGCTGAAGCGGGACCACACGGTC
droFic1 scf7180000452451:99780-100058 - AACCACTACTAACCCAGAGCTGCCGCC---------GC------GTCCCGTGGAT---CCTTCAGGTGGGT-CCTGA-CCC-----------TCAC-TTAAC-----------------CCTT----CTC--------AGTCGCCCG-------------TT--------T-TCCTCACCTG-----------------------------TGTGTTGCATACTCGCAAGCGCCGCCGAAAGA-----CATCCACATCGCATTGCGCATCTGCCACTGCATACTTTTGAGGGTTCC--T-AT-A--ATA------------AGA--------------ATG-GGTT-----------------------TA-A--CTTTGT--GGTAT-TCGTGT--ATCCTAGATGTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGCGGGACCACACGGTC
droEle1 scf7180000490564:5325-5597 + AACCAGTACTAACCCAGATCTGCTGCC---------GC------GTCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCC-----------TAGC----------------------CCCTT----CTC--------ACTCACCCC-------------TT-C------T-CACTCACCTG-----------------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAAAA----CACCCACATTGCATTGCGCACCTGCCGCTGCATACTTTCGAGAGCTGA--AAAT-C--ATA------------TGA--------------ATT-GTGT-----------------------TA-A--CTTTT------TG-TTA-AT--ATCGCAGATATGGAGCACGAGG---ACAAGCAG------------CTGCTGCAGCAGCTGAAGCGGGACCACACCGTC
droRho1 scf7180000766314:12802-13072 + AACCAGTACTAACCCAGAGCAGCTGCC---------GT------GCCCCGCGGAT---CCTTCAGGTGGGT-CCTAG-C---------------------------------------CCCTT----CTC--------ACCCACCCT-------------CG--------T-CTCTCACCTG-----------------------------TGTGTTGCATACTCGCAAGCGCCGCCACCAAA-----CATCCACATTGCATTGCGCATCTGCCGCTGCATACTTTCGAGGGCTAACTG-AA-A--TAA------------TGA--------------ATT-GTGT-----------------------TA-A--CTTTGG--GTTTG-TTATGT--ATCGCAGATATGGAGAGCGAGG---ACAAGCAT------------CTGCTGCTGCAGCTGAAGCGGGACCACACCGTC
droBia1 scf7180000300910:2425898-2426174 - AACCAGTACTAACCCAGAGCTG---CC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCGATCTCGAACTCAGGCTAAACCATAAC-------------------------------------------CT-------------TA--------A-CCCTCACCTT-----------------------------TGTGTTGCATACTCTCGAGCGCCGCCAAAA-------CATCCACATTGCATTGCGCACCTGCCACTGCATACTTTCGAGGGCTGA--G-AT-A--CTT------------TGA------------GTATG-GGTT-----------------------TG-A--CTTTAT--GATCT-TTATGTATATCACAGATGTGGACAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGACCACACCGTC
droTak1 scf7180000415356:437490-437761 - AACCAGTACTAACCCAGAGCTGCTGCC------------------------GGAT---CCTTCAGGTGGGT-CGCAA-ACC-----------AAACCTAAAA----------------CCCCTCCC---------CCAACTCACCTG----------------------------TCACCTG-----------------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAACATACACATCCCCATTGCATTGCGCCTCTGCCGCTGCATACTTTCGAGGGCCCA--G-AT-A--TT-------------TGT----------AAATATT-ATAT-----------------------TA-A--CTTTAT--GATT------CC--ACAACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGACCACACCGTC
dm3 chr3L:8780398-8780674 + AACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCATTCC------------ATTCACCTG-----------------------T-CTCTCACCTG-----------------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATTCACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGAGTTAA--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------TA-A--CGTTAC--GTTTG-TTATGT--ATCACAGATATGGAAAGCGAGG---ATCAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCACACGGTC
droSim2 3l:8569710-8569985 + dsi_14956 AACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCAT-CC------------ATTCACCTG-----------------------T-CCCTCACCTG-----------------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCCACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------TA-A--CCTTTC--GATTG-TTATGT--ATCACAGATATGGAAAGCGAGG---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCACACGGTC
droSec2 scaffold_0:1057613-1057889 + AACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCATTCC------------ATTCACCTG-----------------------T-CTCTCACCTG-----------------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCCACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------TA-A--CCTTAC--GATTG-TTATGT--ATCACAGATATGGAGAGCGAGA---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCACACGGTC
droYak3 3L:3129094-3129387 - AACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCCGTGGAT---CCTACAGGTGGGT-CTCAA-CCT-----------AAACCGTAACCTTAACCACACCCCATTCCATTCC------------ATTCACCTG-----------------------T-CTCTCACCTG-----------------------------TGTGTTGCATACTTGCGAGCGCCGCCAATA-------CATCCACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAC--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------TAAA--CCTTAC--GATTG-TTATGT--ATCACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGACCACACGGTC
droEre2 scaffold_4784:5259422-5259689 - AACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCGCCGGAT---CCTACAGGTGGGT-CTCAA-CCT-----------AAGCCCTAAC----------------CCCATGCC------------ATTTACCTG---------------------------------TG-----------------------------TGTGTTGCATACTTGCGAGCGCCGCCATTA-------CATCCACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--G-AT-C--TGA------------TGA--------------GTG-TGCC-----------------------TA-A--CTTTAC--GCTGG-TTATGT--ATCGCAGATATGGACAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGACCACACCGTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AACCAGTACTAACCCAGAGCCACAGCC---------TCA---AGCAGCTATGGAT---GCGACAGGTAGGT-GCAGC-T-------------TTTAC-AAAA----------------TAC------------------GTTGCCTA-------------CTTTTAAGAGC---GCCACATG---------A----------------AAATGCATTGCCTACTTTCAAACGCAGCCTCAA-------ACTAAACATCAAATT----TGCTGCCGTTGCACACTTCTCAGCGCCATC-G-AA-A-----------------AAAGCCCGTTCCCCA--AATTTA-------------AAAGTCATTT--TC-T--CTTTTT--GA---------T--CACATAGATCTGG------AGG---ACAAGGAA------------ATGTTAATGCAGCTGAAACGCGATCATACAGTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACG.............1812.002002000000000000000000000000000000000000000000000000000000000000
.ACCAGTACTAACCCAGAGCCACAGCC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000001000100000000000000000000000000000000000000000
....AGTACTAACCCAGAGCCACAGCC---------TCA---.................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002001000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACGCG...........2012.002001000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................A------------ATGTTAATGCAGCTGAAACGCGAT.........2511.001000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTAATGCAGCTGAAACGCGATC........2411.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGAAACGCGATCAT......1911.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAGCTGAAACGCGAT.........1911.001001000000000000000000000000000000000000000000000000000000000000
..............CAGAGCCACAGCC---------TCA---AGCAGCTATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGAAACGCGATCA.......1811.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAA------------ATGTTAATGCAGCT...................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTGAAACGCGATCA.......1911.001000000000000000001000000000000000000000000000000000000000000000
.....GTACTAACCCAGAGCCACAGCC---------TCA---AG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCTGAAACGCGATCATAC....2211.001000000000000000000000010000000000000000000000000000000000000000
...CAGTACTAACCCAGAGCCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGCAGCTGAAACGCGATC........2111.001000000000000000000010000000000000000000000000000000000000000000
......TACTAACCCAGAGCCACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATGCAGCTGAAACGC............1911.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................A------------ATGTTAATGCAGCTGAAACGCGATCA.......2711.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATGCAGCTGAAACGCG...........1911.001001000000000000000000000000000000000000000000000000000000000000
..........AACCCAGAGCCACAGCC---------TCA---AGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
.....................ACAGCC---------TCA---AGCAGCTATGGAT---GC...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
.................AGCCACAGCC---------TCA---AGCAGCTAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTGG------AGG---ACAAGGAA------------ATG..............................1811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGG------AGG---ACAAGGAA------------AT...............................1911.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GG---ACAAGGAA------------ATGTTAATGCAGCTGAA................2711.001000000000000000000100000000000000000000000000000000000000000000
.....GTACTAACCCAGAGCCACAGCC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..............CAGAGCCACAGCC---------TCA---AGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
...........ACCCAGAGCCACAGCC---------TCA---AGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAAACGCGATCATACA...1911.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
AACCAGTACTAACCAAGAGCCTC---C---------AA------CAGCCATGGAA---GCAACAGGTAGGT-GCAGC-T-------------T--------------------------CTAT----TTG--------AACTAAAAAAAATTGTAGCATACTTTTCAGAGCC--GCAAAAAGCCAGCGCTTCTCA--CATTCTATATCAAATATG------------------------------------------------------------TTGCATACTTTCAAGCGCTGC--A----------------------------------------------------------------------------------------------------------------------------------------------------------AATAAA----------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......ACTAACCAAGAGCCTC---C---------AA------CAG............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
AACCAGTACTAACCAAGAGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droGri2
AACCAGTACTAACCCAGAACTACCACAACAGTTGCCTCCACTACAAGCTATGGAT---ACAACAGGTAGGT-TTTT----T-----------AAGCTTT-----------------------------------------CAGCGAG---------------------------------AA-----------------------------ATTGTTGCATGCTTTCAGGCGCTGCCACAA-------AATCC--ATCATTTTACTCGT-CGCTGTTGCATTCTTTTCTGTGTCATTCG-AA-A--CAA-AAC---A--GATGT------ATTCTA--GCTTCTAT-----------------------TG-A--CAATTT--GCACT-TTTTGT---ACACAGATCTGGA------GG---ATAAGGAA------------ATGCTAATGCAACTGAAACGTGATCATACCGTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGA------GG---ATAAGGA..............................................2020.50101
droWil2
AACCAGTACTAACCCAGAGCAGACGCT---------GA------CGTCAACG------CAAACAGGTAAGGTG-CCAGCAGCC---------G--------------------------CTT-----------------------AG-----------------------T-TAATTAAAAA-----------------------------TGTGTTGCCTACTTTTATGTGTGTCATTTT-------CATACATTTTGC-----AAAAATTGTGTTGCCTACTTACAAAGCATA--------------------------TAA--------------ATG--------------------TTGTTCTC---TCACTTAATACATTTCCTCG--C--CCTTTAGATCTCGATAATGATGGCGATAAACAA------------TTGCTGCTGCAACTGAAACGTGATCACACTGTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............CAGAGCAGACGCT---------GA------CGTCAACG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200200
...................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGATAATGATGGCG.....................................................1912.00220000
.................AGCAGACGCT---------GA------CGTCAACG------C................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000
...........ACCCAGAGCAGACGCT---------GA------CGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACGTGATCACACTGTC2011.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGATCTCGATAATGATGGCG.....................................................2011.00110000
.....GTACTAACCCAGAGCAGACGCT---------GA------...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..........AACCCAGAGCAGACGCT---------GA------CGTCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAAACGTGATCACACTGT.2111.00100100
AACCAGTACTAACCCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATAATGATGGCGATAAACAA------------T................................2211.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAA------------TTGCTGCTGCAACTG..................2211.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTCGATAATGATGGCGATA..................................................1911.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGATGGCGATAAACA..............................................1911.00101000
.................AGCAGACGCT---------GA------CGTCAACG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
................GAGCAGACGCT---------GA------CGTCAACG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCAACTGAAACGT............1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGATAATGATGGCGAT...................................................2111.00100100
...............................................CAACG------CAAACAGGTAAGGTG-C................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGATCTCGATAATGATGGCA.....................................................2011.00110000
......................................................................................................................................................................................................................................................................................................................................................................................ACTTAATACATTTCCTCG--C--CCTTTAG.......................................................................2611.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGATAATGATGGCGATAAACA..............................................2611.00100100
dp5
AACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTG----------------------------------------------------------------------------------------------------------CCG-----------------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGACAT----GTCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---C-ATACCC--------CTAGGGATAA--------------GTG-TGCTATTACTATACAATTGTTGTTCTC---CC--------------------C--CACACAGATCTGGACAGCGAAG---GGAAGCAGCAACAGCAGCTGCTGCAGCTGCAGCTGAAGCGCGACCACACGGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGCAGCA...........................................2616.0060000000060
...................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGCAGC............................................2513.0030000000030
....................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGACAGCGAAG---GGAAGCAGCA...........................................2512.0020000000020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAAGCGCGACCACACG...2012.0020200000000
....AGTACTAACCCCG------------------------------CTGTGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGATCTGGACAGCGAAG---GGAAGC...............................................2312.0020000000020
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGATCTGGACAGCGAAG---GGAAGC...............................................2412.0020000000020
....AGTACTAACCCCG------------------------------CTGTGGATACCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGACAGCGAAG---GGAAGCAGC............................................2812.0020000000020
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAAG---GGAAGCAGC............................................2112.0020000000020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGCTGAAGCGCGACC........2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGCA...........................................2411.0010000000010
...CAGTACTAACCCCG------------------------------CTGTGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.......ACTAACCCCG------------------------------CTGTGGATACC.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......ACTAACCCCG------------------------------CTGTGGATACCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......TACTAACCCCG------------------------------CTGTGGATACCCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTGGACAGCGAAG---GGAAGCAGCAACAGC......................................2811.0010000000001
...................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGCA..............................................2311.0010000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAAG---GGAAGC...............................................2211.0010000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGC............................................2311.0010000000010
................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGACAGCGAAG---GGAAGC...............................................2511.0010000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCTGAAGCGCGACC........1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCTGCTGCAGCT.........................2311.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGACAGCGAAG---GGAAGCAGC............................................2411.0010000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGCAAC.........................................2611.0010000000010
....AGTACTAACCCCG------------------------------CTGTGGATA...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000000
.....GTACTAACCCCG------------------------------CTGTGGATACCCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAGCGAAG---GGAAGCAGCAA..........................................2511.0010000000100
...........ACCCCG------------------------------CTGTGGATACCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....GTACTAACCCCG------------------------------CTGTGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
AACCAGTACTAACCCCG------------------------------CTGTGGATACCCCAACAGGTAGGGTG----------------------------------------------------------------------------------------------------------CCG-----------------------------TGTGTTGCATACTCTCGAGCGCTGCCAAGACAT----GTCCATCACTCCATCACACAGCAGCCGCTGCATACTTTTCTGTGTGA---C-ATACCC--------CCAGGGATAA--------------GTG-TGCTATTACTATACAATTGTTGTTCTC---CC--------------------C--CACACAGATCTGGACAGCGAGG---GGAAGCAGCAACAACAGCTGCTGCAGCTGCAGCTGAAGCGCGACCACACGGTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCGCGACCACACGGT.1912.002000002
....AGTACTAACCCCG------------------------------CTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.....GTACTAACCCCG------------------------------CTGTGGATACC.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.....GTACTAACCCCG------------------------------CTGTGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTGGACAGCGAGG---GGAAGCA..............................................2011.001010000
.ACCAGTACTAACCCCG------------------------------CTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATCTGGACAGCGAGG---GGAAG................................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAGG---GGAAGCA..............................................1911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGACAGCGAGG---GGAAGC...............................................2211.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAGG---GGAAGCAGC............................................2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................GGACAGCGAGG---GGAAGCAGC............................................2011.001010000
.....GTACTAACCCCG------------------------------CTGTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droAna3
AACCACTACTAACCCAGAGCTGCTGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGA-CTC---------------------------------------GATCTCTCTC--------ACCTGTCCG-------------TT--------C-CTCTCACC-------------------------------TGTGTTGCATACTTTCGCGCATAGAAA----------CTCGAACATAGCATTGCGCCGGCGCCACTGCATACCTTTGAGAGCTTC--G-AT-C--TT--------------TA--------------ATTTTCTC-----------------------TA-A--TTTCTTTCAATTA-TTA--A--CTCACAGATGTAGAGAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAAAGGGACCACACTGTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................AGCTGCTGCC---------GC------TACCCGTGGAT---CCC..............................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGAGCGAGG---ACAAGCAG------------C................................2212.002100001
..............................................................................................................................................................................................................................................................................................................................................................................................................................CGAGG---ACAAGCAG------------CTGCTGATGC.......................2311.001100000
.........TAACCCAGAGCTGCTGCC---------GC------TACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGAGCGAGG---ACAAG................................................1811.001100000
.......ACTAACCCAGAGCTGCTGCC---------GC------TACCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................GCTGCTGCC---------GC------TACCCGTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGATGCA......................2311.001100000
............CCCAGAGCTGCTGCC---------GC------TACCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...........ACCCAGAGCTGCTGCC---------GC------TACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...............AGAGCTGCTGCC---------GC------TACCCGTGGAT---.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
............CCCAGAGCTGCTGCC---------GC------TACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGATGCAACTGAAAAGGGACCA.......2511.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGAT.........................2011.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGATGCAACTGAAAAGGGAC.........2311.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTGAAAAGGGACCACACT...2211.001100000
..........AACCCAGAGCTGCTGCC---------GC------TACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................................GC------TACCCGTGGAT---CCCGCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................GAGCTGCTGCC---------GC------TACCCGTGGAT---.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................GAGCTGCTGCC---------GC------TACCCGTGGAT---CC...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
........CTAACCCAGAGCTGCTGCC---------GC------TACCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---ACAAGCAG------------CTGCTGATGCA......................2211.001100000
..CCACTACTAACCCAGAGCTGCTGCC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGCAACTGAAAAGGGACC........2311.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGATGC.......................2211.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGAGAGCGAGG---ACAAG................................................2011.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................GATGTAGAGAGCGAGG---ACAAGCAG------------CT...............................2611.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAACTGAAAAGGGACCA.......2111.001100000
................GAGCTGCTGCC---------GC------TACCCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................GAGCTGCTGCC---------GC------TACCCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGAGCGAGG---ACAAGCAG------------CTGC.............................2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGAGCGAGG---ACAAGCAG------------CTGCTG...........................2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGAGAGCGAGG---ACAAGC...............................................2011.001100000
...........ACCCAGAGCTGCTGCC---------GC------TACCCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................CTTC--G-AT-C--TT--------------TA--------------ATTTTCTC-----------------------T.........................................................................................................2111.001100000
droBip1
AACCACTACTAACACAGAGCTGCAGCC---------GC------TACCCGTGGAT---CCCGCAGGTGGGT-CTCGA-CGC-----------GATC----------------------TCTCT----CTC--------ACCTGTCCA-------------TA--------C-CTCTCACC-------------------------------TTTGTTGCATACTTTCGCGCATAGAAG----------CTCAATCATGGCATTGCGCCGGCGCCACTGCATACCTTTGAGGGCTCT--G-TA-C---TT------------TGA--------------TTT-TATT-----------------------TA-A--TTTTTT--CCTAA-TCA--A--CTCACAGATGTAGAAAGCGAGG---ACAAGCAG------------CTGCTGATGCAACTGAAACGGGACCACACTGTCSizeHit CountTotal NormTotal
No Reads
droKik1
AACCAGTACTAACCCCGAGCTGCTGCC---------GC------GTCCCGTGGAT---CCGTCAGGTGGGT-CTAGC-C-------------ACTCC-TAAC----------------TCTCT----CTCTCTCTCCCTCTCACCTG-----------------------C---CTCACCTG---------TGTGTAT----ATTCTCACCTGTGTTGCATACTCTCAAGCGCCGCCAGGT-------CAACCACATTGCATTGCGTCTGCGCCGCTGCATACTTTTGAGTGCCGTTTC-AA-A---AAAGAATTTAGAATTAA--------------ATG-TAAAGTTTCTATCCAA------------------------------------T--CCCTCAGATCTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTTCAGCTGAAGCGGGACCACACGGTCSizeHit CountTotal NormTotal
No Reads
droFic1
AACCACTACTAACCCAGAGCTGCCGCC---------GC------GTCCCGTGGAT---CCTTCAGGTGGGT-CCTGA-CCC-----------TCAC-TTAAC-----------------CCTT----CTC--------AGTCGCCCG-------------TT--------T-TCCTCACCTG-----------------------------TGTGTTGCATACTCGCAAGCGCCGCCGAAAGA-----CATCCACATCGCATTGCGCATCTGCCACTGCATACTTTTGAGGGTTCC--T-AT-A--ATA------------AGA--------------ATG-GGTT-----------------------TA-A--CTTTGT--GGTAT-TCGTGT--ATCCTAGATGTGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGCGGGACCACACGGTCSizeHit CountTotal NormTotal
No Reads
droEle1
AACCAGTACTAACCCAGATCTGCTGCC---------GC------GTCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCC-----------TAGC----------------------CCCTT----CTC--------ACTCACCCC-------------TT-C------T-CACTCACCTG-----------------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAAAA----CACCCACATTGCATTGCGCACCTGCCGCTGCATACTTTCGAGAGCTGA--AAAT-C--ATA------------TGA--------------ATT-GTGT-----------------------TA-A--CTTTT------TG-TTA-AT--ATCGCAGATATGGAGCACGAGG---ACAAGCAG------------CTGCTGCAGCAGCTGAAGCGGGACCACACCGTCSizeHit CountTotal NormTotal
No Reads
droRho1
AACCAGTACTAACCCAGAGCAGCTGCC---------GT------GCCCCGCGGAT---CCTTCAGGTGGGT-CCTAG-C---------------------------------------CCCTT----CTC--------ACCCACCCT-------------CG--------T-CTCTCACCTG-----------------------------TGTGTTGCATACTCGCAAGCGCCGCCACCAAA-----CATCCACATTGCATTGCGCATCTGCCGCTGCATACTTTCGAGGGCTAACTG-AA-A--TAA------------TGA--------------ATT-GTGT-----------------------TA-A--CTTTGG--GTTTG-TTATGT--ATCGCAGATATGGAGAGCGAGG---ACAAGCAT------------CTGCTGCTGCAGCTGAAGCGGGACCACACCGTCSizeHit CountTotal NormTotal
No Reads
droBia1
AACCAGTACTAACCCAGAGCTG---CC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCGATCTCGAACTCAGGCTAAACCATAAC-------------------------------------------CT-------------TA--------A-CCCTCACCTT-----------------------------TGTGTTGCATACTCTCGAGCGCCGCCAAAA-------CATCCACATTGCATTGCGCACCTGCCACTGCATACTTTCGAGGGCTGA--G-AT-A--CTT------------TGA------------GTATG-GGTT-----------------------TG-A--CTTTAT--GATCT-TTATGTATATCACAGATGTGGACAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGACCACACCGTCSizeHit CountTotal NormTotal
No Reads
droTak1
AACCAGTACTAACCCAGAGCTGCTGCC------------------------GGAT---CCTTCAGGTGGGT-CGCAA-ACC-----------AAACCTAAAA----------------CCCCTCCC---------CCAACTCACCTG----------------------------TCACCTG-----------------------------TGTGTTGCATACTCGCAAGCGCCGCCAAAAACATACACATCCCCATTGCATTGCGCCTCTGCCGCTGCATACTTTCGAGGGCCCA--G-AT-A--TT-------------TGT----------AAATATT-ATAT-----------------------TA-A--CTTTAT--GATT------CC--ACAACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTGCAGCTGAAGAGGGACCACACCGTCSizeHit CountTotal NormTotal
No Reads
dm3
AACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCATTCC------------ATTCACCTG-----------------------T-CTCTCACCTG-----------------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATTCACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGAGTTAA--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------TA-A--CGTTAC--GTTTG-TTATGT--ATCACAGATATGGAAAGCGAGG---ATCAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCACACGGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCAGCTGAAGCGGGACCACA.....2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAAGCGAGG---ATCAGCAG------------CTGCT............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGG---ATCAGCAG------------CTGCTC...........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCTGAAGCGGGACC........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GTACTAACCCAGAGCTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCCAGCTGAAGCGGGACC........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCTGAAGCGGGACCACA.....2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAGG---ATCAGCAG------------CT...............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....GTACTAACCCAGAGCTGCTGCC---------GC------...............................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ATCAGCAG------------CTGCTC...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCGAGG---ATCAGCAG------------CT...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TAACCCAGAGCTGCTGCC---------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GAGAGTTAA--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------T.........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................................................GA------------TGA--------------ATG-GGCT-----------------------TA-A--CGT.................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ATCAGCAG------------C................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGC.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGAGCTGCTGCC---------GC------ATCCTGTGGAT---.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAAAGCGAGG---ATCAGCA..............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCTGAAGCGGGACCACACG...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCTGAAGCGGGACCACA.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGCTGAAGCGGGACC........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GCCGCCAATA-------CATTCACATTGCATTG...................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGCC---------GC------ATCCTGTGGAT---CCTTCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCAGCTGAAGCGGGACCA.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCTGCC---------GC------ATCCTGTGGAT---CCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACCCAGAGCTGCTGCC---------GC------ATCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCCAGCTGAAGCGGGACCACA.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGCGGGACCACACGGTC2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTCCAGCTGAAGCGGGACCACA.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AACCCAGAGCTGCTGCC---------GC------...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....GTACTAACCCAGAGCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ACTAACCCAGAGCTGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCTCCAGCTGAAGCGGGACCACA.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACCCAGAGCTGCTGCC---------GC------ATCCTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ACTAACCCAGAGCTGCTGCC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........TAACCCAGAGCTGCTGCC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGCTC...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAAGCGGGACCACA.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAGCAG------------CTGCTCC..........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------TA-.......................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGCGAGG---ATCAGCA..............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAAGCGAGG---ATCAGCAG------------CTG..............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGAGCTGCTGCC---------GC------ATCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ATCAGCAG------------CTGCT............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TAA--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------TA-A--CGT.................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAGG---ATCAGCAG------------CTG..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................ATTCACCTG-----------------------T-CTCTCACCTG-----------------------------T.......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................ACTCGCGAGCGCCGCCAATA-------C..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAG------------CTGCTCCTCCAGCTGAAGC..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGCT............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTCCAGCTGAAGCGGGACC........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAG------------CTGCTCCTCCAGCTGAAGCGGG...........2911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCTCCAGCTGAAGCGGGACC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................G---ATCAGCAG------------CTGCTCCTCC.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GTTAA--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------T.........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...............................................................................................................................................................................................................................................................................................................T--TGA------------TGA--------------ATG-GGCT-----------------------TA-A--CGTTAC--GT..........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................TGCC---------GC------ATCCTGTGGAT---CCTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CT-----------AAACCTTAAC----------------TCCATTCC------------A................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TTAA--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGAAGCGGGACCAC......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGATATGGAAAGCGAGG---ATC..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCTCCAGCTGAAGCGG............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................CACCTG-----------------------T-CTCTCACCTG-----------------------------TGTGTTGC................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ATCAGCAG------------CTG..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................G-GGCT-----------------------TA-A--CGTTAC--GTTTG-TTATGT--A.............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCAGCTGAAGCGGGAC.........1911.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GC------ATCCTGTGGAT---CCTTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCGAGG---ATCAGCAG------------CTGCTATC.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TGCTGCC---------GC------ATCCTGTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGTACTAACCCAGAGCTGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGG---ATCAGCAG------------CTGCTCC..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAGCAG------------CTGC.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................GTGGAT---CCTTCAGGTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCC---------GC------ATCCTGTGGAT---CCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACCAGTACTAACCCAGAGCTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCTGAAGCGGGACCACAC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TCTCACCTG-----------------------------TGTGTTGCATAC............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
......................CTGCC---------GC------ATCCTGTGGAT---CCTTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAAAGCGAGG---ATC..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAAGCGGGACCACACG...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAAGCGGGACCACACGG..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
............................................................................................................................................................................................................................................................................................................AT-T--TGA------------TGA--------------ATG-GGCT-----------------------TA-A--CG..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................GCTGCC---------GC------ATCCTGTGGAT---CC...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAGCAG------------CTG..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCGAGG---ATCAGCAG------------CTG..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAAAGCGAGG---ATCA.................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ATCAGCAG------------CTGCTCG..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGCGAGG---ATCAGCAG------------CT...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................................................................................................................TTTGAGAGTTAA--G-AT-T--TGA------------TGA--------------ATG-G....................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................................................................................................................ATCTGCCGCTGCATACTTTT............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCTGAAGCGGGACCACAC....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAAGCGGGACCACAC....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAAGCGAGG---ATCAATC..............................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCAT-CC------------ATTCACCTG-----------------------T-CCCTCACCTG-----------------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCCACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------TA-A--CCTTTC--GATTG-TTATGT--ATCACAGATATGGAAAGCGAGG---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCACACGGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAAAGCGAGG---ACAAGCAG------------CTG..............................2512.00200000000200000000
.....................GCTGCC---------GC------ATCCTGTGGAT---CCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ACAAGCAG------------CTGCTC...........................2111.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................T-----------------------TA-A--CCTTTC--GATTG-TTATGT--ATC...........................................................................2411.00110000000000000000
..............CAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCT..............................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
.....................GCTGCC---------GC------ATCCTGTGGAT---C................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
..................................................................................................................................................................................................................................................................................................GGCTAA--G-AT-T--TGA------------TGA--------------ATG-GGC..................................................................................................................................2211.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCAGCTGAAGCGGGACC........2011.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTCCAGCTGAAGCGGGACCACAC....2711.00100010000000000000
droSec2
AACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCTGTGGAT---CCTTCAGGTGGGT-CTCAA-CCT-----------AAACCTTAAC----------------TCCATTCC------------ATTCACCTG-----------------------T-CTCTCACCTG-----------------------------TGTGTTGCATACTCGCGAGCGCCGCCAATA-------CATCCACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------TA-A--CCTTAC--GATTG-TTATGT--ATCACAGATATGGAGAGCGAGA---ACAAGCAG------------CTGCTCCTCCAGCTGAAGCGGGACCACACGGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................GAGCTGCTGCC---------GC------ATCCTGTGGAT---CC...............................................................................................................................................................................................................................................................................................................................................................................................................................2612.0022000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTCCAGCTGAAGCGGGACCACA.....2511.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGATATGGAGAGCGAGA---ACAAGC...............................................2311.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAGCGAGA---ACAAGCAG------------C................................2111.0011000
....................TGCTGCC---------GC------ATCCTGTGGAT---.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
droYak3
AACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCCGTGGAT---CCTACAGGTGGGT-CTCAA-CCT-----------AAACCGTAACCTTAACCACACCCCATTCCATTCC------------ATTCACCTG-----------------------T-CTCTCACCTG-----------------------------TGTGTTGCATACTTGCGAGCGCCGCCAATA-------CATCCACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAC--G-AT-T--TGA------------TGA--------------ATG-GGCT-----------------------TAAA--CCTTAC--GATTG-TTATGT--ATCACAGATATGGAGAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGACCACACGGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........AACCCAGAGCTGCTGCC---------GC------...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAGCGAGG---ACAAGC...............................................1911.00100001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAGCGAGG---ACAAGCAG------------CTGCT............................2611.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCCAACTGAAGCGGGA..........2011.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAGAGCGAGG---ACAAGC...............................................2211.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGAGAGCGAGG---ACAAG................................................2111.00100000010000
................GAGCTGCTGCC---------GC------ATCCCGTGGAT---C................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGT..........................1911.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CTGCTGCTCCAACTGAAGC..............2011.00101000000000
droEre2
AACCAGTACTAACCCAGAGCTGCTGCC---------GC------ATCCGCCGGAT---CCTACAGGTGGGT-CTCAA-CCT-----------AAGCCCTAAC----------------CCCATGCC------------ATTTACCTG---------------------------------TG-----------------------------TGTGTTGCATACTTGCGAGCGCCGCCATTA-------CATCCACATTGCATTGCGCATCTGCCGCTGCATACTTTTGAGGGCTAA--G-AT-C--TGA------------TGA--------------GTG-TGCC-----------------------TA-A--CTTTAC--GCTGG-TTATGT--ATCGCAGATATGGACAGCGAGG---ACAAGCAG------------CTGCTGCTCCAACTGAAGCGGGACCACACCGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....GTACTAACCCAGAGCTGCTGCC---------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................AGATATGGACAGCGAGG---ACAAGC...............................................2311.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGACAGCGAGG---ACA..................................................1911.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------CTGCTGCTCCAACTGAAGCGG............2311.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTCCAACTGAAGCG.............1911.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGG---ACAAGCAG------------CTGCTGCTCCAAC....................2511.0011000000
............CCCAGAGCTGCTGCC---------GC------ATC............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................TATGGACAGCGAGG---ACAAGCAG------------C................................2311.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------------CTGCTGCTCCAACTGA.................2111.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ACAAGCAG------------CTGCTGCT.........................2311.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGACAGCGAGG---ACAAGCA..............................................2211.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAGCGAGG---ACAAGCAG------------CT...............................2211.0011000000
...............AGAGCTGCTGCC---------GC------ATCCGCCGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGG---ACAAGCAG------------CTGC.............................1911.0010000100
...............AGAGCTGCTGCC---------GC------ATCCGCCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAACTGAAGCGGGACCACACCGTC2811.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCGAGG---ACAAGCAG------------CTGCT............................2311.0010000010
..............CAGAGCTGCTGCC---------GC------ATCCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GGACAGCGAGG---ACAAGCAG------------CTGCTGCT.........................2711.0011000000
.............CCAGAGCTGCTGCC---------GC------ATC............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
...........ACCCAGAGCTGCTGCC---------GC------ATC............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGG---ACAAGCAG------------CTGC.............................1811.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAAGCGGGACCACACC...1911.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTCCAACTGAAGCGGGACCAC......2511.0011000000
..............CAGAGCTGCTGCC---------GC------ATCCGCCGGAT---.................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
........CTAACCCAGAGCTGCTGCC---------GC------ATC............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000

Generated: 05/16/2015 at 08:32 PM