ID:

dvi_18660

 Coordinate:

scaffold_13049:6456246-6456396 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.47 -12.27 -12.07

Flybase annnotation

CDS [Dvir\GJ13073-cds]; exon [dvir_GLEANR_12993:3]; intron [Dvir\GJ13073-in]

No Repeatable elements found

mature
  1. scaffold_1990:62-79 +
  2. scaffold_8078:398-415 +
  3. scaffold_8306:1375-1392 +
  4. scaffold_9434:4047-4064 +
  5. scaffold_9568:68-85 +
  6. scaffold_11979:1298-1315 +
  7. scaffold_12149:1131-1148 +
  8. scaffold_12313:1140-1157 +
  9. scaffold_12384:1292-1309 +
  10. scaffold_12928:5000041-5000058 +
  11. scaffold_12928:7338485-7338502 +
  12. scaffold_12932:1916482-1916499 +
  13. scaffold_12963:13481206-13481223 +
  14. scaffold_13045:1997066-1997083 +
  15. scaffold_13047:9658594-9658611 +
  16. scaffold_13047:13924702-13924719 +
  17. scaffold_13049:8028539-8028556 +
  18. scaffold_13049:24361842-24361859 +
  19. scaffold_13246:2224043-2224060 +
  20. scaffold_13324:1568057-1568074 +
  21. scaffold_2338:4-21 +
  22. scaffold_3063:573-590 +
  23. scaffold_7671:7-24 +
  24. scaffold_12472:398199-398216 +
  25. scaffold_12726:516420-516437 +
  26. scaffold_12726:1924097-1924114 +
  27. scaffold_12875:16335670-16335687 +
  28. scaffold_12875:17401509-17401526 +
  29. scaffold_12928:2295001-2295018 +
  30. scaffold_12928:4757626-4757643 +
  31. scaffold_12928:7447689-7447706 +
  32. scaffold_12932:1550051-1550068 +
  33. scaffold_12932:1921898-1921915 +
  34. scaffold_12970:2332495-2332512 +
  35. scaffold_12970:3791117-3791134 +
  36. scaffold_13042:1172888-1172905 +
  37. scaffold_13047:417519-417536 +
  38. scaffold_13047:1368920-1368937 +
  39. scaffold_13049:14731612-14731629 +
  40. scaffold_13049:20190276-20190293 +
  41. scaffold_12723:302643-302660 +
  42. scaffold_12726:414705-414722 +
  43. scaffold_12726:595496-595513 +
  44. scaffold_12822:1929933-1929950 +
  45. scaffold_12875:4756575-4756592 +
  46. scaffold_12928:1515556-1515573 +
  47. scaffold_12958:1026191-1026208 +
  48. scaffold_12963:5270952-5270969 +
  49. scaffold_12963:15812302-15812319 +
  50. scaffold_13042:4997990-4998007 +
  51. scaffold_13047:5744204-5744221 +
  52. scaffold_13047:8006348-8006365 +
  53. scaffold_13047:8121668-8121685 +
  54. dvi_16140  scaffold_13047:9319008-9319025 +
  55. scaffold_13049:693257-693274 +
  56. scaffold_13049:2547150-2547167 +
  57. dvi_18660  scaffold_13049:6456269-6456286 +
  58. scaffold_13049:7317762-7317779 +
  59. scaffold_13049:20723841-20723858 +
  60. scaffold_13246:826716-826733 +
  61. scaffold_4195:84-101 +
  62. scaffold_7112:353-370 +
  63. scaffold_8723:109-126 +
  64. scaffold_8853:420-437 +
  65. scaffold_9692:2892-2909 +
  66. scaffold_10343:1320-1337 +
  67. scaffold_10519:948-965 +
  68. scaffold_12722:3691-3708 +
  69. scaffold_12722:5650-5667 +
  70. scaffold_12820:76015-76032 +
  71. scaffold_12820:83557-83574 +
  72. scaffold_12820:86316-86333 +
  73. scaffold_12820:94150-94167 +
  74. scaffold_12820:97609-97626 +
  75. scaffold_12820:101114-101131 +
  76. scaffold_12820:114991-115008 +
  77. scaffold_12820:140166-140183 +
  78. scaffold_12820:142066-142083 +
  79. scaffold_12820:170393-170410 +
  80. scaffold_12820:182195-182212 +
  81. scaffold_3056:210-227 +
  82. scaffold_4353:1611-1628 +
  83. scaffold_9505:5492-5509 +
  84. scaffold_10581:909-926 +
  85. scaffold_12723:5611604-5611621 +
  86. scaffold_12726:1802998-1803015 +
  87. scaffold_12856:42682-42699 +
  88. scaffold_12856:44577-44594 +
  89. scaffold_12942:176706-176723 +
  90. scaffold_12963:16405962-16405979 +
  91. scaffold_12970:2193102-2193119 +
  92. scaffold_12970:10316850-10316867 +
  93. scaffold_12970:11751150-11751167 +
  94. scaffold_13047:10330239-10330256 +
  95. scaffold_13047:16262682-16262699 +
  96. scaffold_13049:2526091-2526108 +
  97. scaffold_13049:4811637-4811654 +
  98. scaffold_13049:7949993-7950010 +
  99. scaffold_13213:983-1000 +
  100. scaffold_13213:1109-1126 +
  101. scaffold_3904:3874-3891 -
  102. scaffold_4826:512-529 -
  103. scaffold_4932:371-388 -
  104. scaffold_4932:2344-2361 -
  105. scaffold_4934:429-446 -
  106. scaffold_5854:3835-3852 -
  107. scaffold_6051:1069-1086 -
  108. scaffold_6239:903-920 -
  109. scaffold_6239:3197-3214 -
  110. scaffold_6961:3011-3028 -
  111. scaffold_7179:1170-1187 -
  112. scaffold_7179:3468-3485 -
  113. scaffold_7318:638-655 -
  114. scaffold_7608:216-233 -
  115. scaffold_9656:2106-2123 -
  116. scaffold_9822:2589-2606 -
  117. scaffold_9822:3742-3759 -
  118. scaffold_9822:5864-5881 -
  119. scaffold_11030:215-232 -
  120. scaffold_13387:691-708 -
  121. scaffold_6379:48-65 +
  122. scaffold_6664:141-158 +
  123. scaffold_9427:91-108 +
  124. scaffold_13049:1368719-1368736 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCAGCAAACAGCGGGTAATCAATGTTCTTAACTGGTCAATGAACCACACGGTAACCCATTGTGCCCGCGTTCGTTTTTTTTTTTTTTTTTTACTCTTAGTTTTAGCCTTTGTTTTGCTGGCATTGCTAATGAAATTACATACAAAATTAATATCAATTTTTTTCTCTCTACCCTTCTCTATCTGCCTCTTCTTCGGCCCAGTCGCAAAAACTCTCTGGTCGTTCGCACACAGCTGAGCGTACGCGTTCATG
**************************************************((((..(((((((((.(((.............................................))).)))))....))))...)))).............................................(((........)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060668
160x9_males_carcasses_total
 M027
male body		 SRR060667
160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 V116
male body		 SRR060666
160_males_carcasses_total
 V053
head
 SRR060670
9_testes_total
 SRR060672
9x160_females_carcasses_total
 GSM1528803
follicle cells		 SRR060671
9x160_males_carcasses_total
 SRR060661
160x9_0-2h_embryos_total
 M028
head
 SRR060686
Argx9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 M061
embryo
 SRR060658
140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR1106721
embryo_10-12h
 SRR060664
9_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
..........................................................................................................................................................................................................CGCAAAAACTCTCTGGTCGTT............................ 21 0 1 3.00 3 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................TCTCTGGTCGTTCGCACACAGCT................. 23 0 1 3.00 3 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GTCGCAAAAACTCTCTGGTCGTTCGC......................... 26 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AACTCTCTGGTCGTTCGCA........................ 19 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GTTCGCACACAGCTGAGCGTACG........ 23 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAAACTCTCTGGTCGTTCGCA........................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGCACACAGCTGAGCGTACGCGTTCAT. 27 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ACTCTCTGGTCGTTCGCACACAGCT................. 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTGGTCGTTCGCACACAGCTG................ 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CCAGTCGCAAAAACTCTCTGGTCGTT............................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GCTGCGCGTACGCGTTCAT. 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GCCAGTCGCAAAAACTCTCT................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTCTCTGGTCGTTCGCACA...................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................AAGCCAGTCGCAAAAACTCTCTGGTC............................... 26 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GCTGAGCGTACGCGTTCATG 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................AATGATCCAAACGGTAACCC.................................................................................................................................................................................................. 20 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CTCTGGTCGTTCGCACACAGCT................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CGCAAAAACTCTCTGGTCGT............................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CGCAAAAACTCTCTGGTCGTTCG.......................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTGGTCGTTCGCACACAGCTGAGCGTACG........ 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAAACTCTCTGGTCGTTCGC......................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AACTCTCTGGTCGTTCGCACACA.................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CAGCTGAGCGTACGCGTTCAT. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AACTCTCTGGTCGTTCGCAC....................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCTCTGGTCGTTCGCACA...................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CAGTCGCAAAAACTCTCTGG................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAAACTCTCTGGTCGTTCGCACACAGC.................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ACACAGCTGAGCGTACGCGTTCAT. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCTCTGGTCGTTCGCACACA.................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........CGGGTAATCAATGATCTTGA............................................................................................................................................................................................................................ 20 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................AGCTGAGCGTACGCGTTCA.. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AATTCTTTTCTCTCGACC............................................................................... 18 2 10 1.00 10 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GCTGAGCGTACGCGTTCAT. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CACAGCTGAGCGTACGCGTTCA.. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CGCAAAAACTCTCTGGTCGTTCGCA........................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAAACTCTCTGGTCGTTCGCACA...................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCTCTGGTCGTTCGCACAC..................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAACTCTCTGGTCGTTCGCACAC..................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GCCAGTCGCAAAAACTCTCTGG................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTGGTCGTTCGCACACAGCT................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CTCTGGTCGTTCGCACACAGCTGAGC............. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ACTCTATGGGCGTTCGCA........................ 18 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................TGAGTCTTTTTCTCTCTACCCT............................................................................. 22 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TCAGTCTTTTTCTCTCTACTCTTC........................................................................... 24 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TTTTTTTTTTTTTTTTTT................................................................................................................................................................ 18 0 20 0.30 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0
........................................................................................................................................................TCAATCTTTTTCTCTCTCCTCTT............................................................................ 23 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TAGTTTAAGCCTTTGTTGTCC...................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................ACCCTTATCTACTTGCCTCTT............................................................. 21 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTTAGATTAAGCCTTTGTT.......................................................................................................................................... 19 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................TAACTGGTCAATGAAGGTCA........................................................................................................................................................................................................... 20 3 12 0.17 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CTCTTTCTGCCCCTTCTTC......................................................... 19 2 12 0.17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0
...........CGGGTCATCGATGTTCTT.............................................................................................................................................................................................................................. 18 2 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTTAGATTAAGCCTTTGTTGT........................................................................................................................................ 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................AATTCTTTTCTCTTTACCC.............................................................................. 19 2 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................AGCAATTTTTTTCTCTTGACC............................................................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TCAGTTTTTTTCTCTCTCCTCTT............................................................................ 23 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................CCCGCGATCGTTTAGTTTTT........................................................................................................................................................................ 20 3 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................ATGAACGACACTGTAACCAA................................................................................................................................................................................................. 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................................................................TCAGTTTTTTTCTCTCTCCC............................................................................... 20 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................CGTTCGTTTTTTTTTT........................................................................................................................................................................ 16 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................GCTGAGTTTAAGCCTTTGTT.......................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGTCGTTTGTCGCCCATTAGTTACAAGAATTGACCAGTTACTTGGTGTGCCATTGGGTAACACGGGCGCAAGCAAAAAAAAAAAAAAAAAATGAGAATCAAAATCGGAAACAAAACGACCGTAACGATTACTTTAATGTATGTTTTAATTATAGTTAAAAAAAGAGAGATGGGAAGAGATAGACGGAGAAGAAGCCGGGTCAGCGTTTTTGAGAGACCAGCAAGCGTGTGTCGACTCGCATGCGCAAGTAC
**************************************************((((..(((((((((.(((.............................................))).)))))....))))...)))).............................................(((........)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060675
140x9_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060659
Argentina_testes_total
 V053
head
 SRR060666
160_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
..............................................................................AAAAAAAAAAAAATGAGAATC........................................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..........................................................................AAAAAAAAAAAAAAAGATTAGGATCAAA..................................................................................................................................................... 28 3 3 0.33 1 0 1 0 0 0 0 0 0 0
............................................................................AAAAAAAAAAAAAAGCGAGAATCA....................................................................................................................................................... 24 2 3 0.33 1 0 0 1 0 0 0 0 0 0
...................................................................................................AAAATGGGAAACAAGATGACC................................................................................................................................... 21 3 6 0.17 1 0 0 0 0 1 0 0 0 0
..........................................................................AAAAAAAAAAAAAAAAATGAG............................................................................................................................................................ 21 0 7 0.14 1 0 0 0 0 0 0 1 0 0
...........................................................................AAAAAAAAAAAAAAAATGAAAATC........................................................................................................................................................ 24 1 8 0.13 1 0 0 0 0 0 0 0 1 0
................................................................................................ATGAAAATCGGAAACCAAA........................................................................................................................................ 19 2 10 0.10 1 0 0 0 0 0 1 0 0 0
............................................................................AAAAAAAAAAAAAAATGAG............................................................................................................................................................ 19 0 11 0.09 1 0 0 0 0 0 0 0 0 1
.............................................................................AAAAAAAAAAAAAATGTGATTCA....................................................................................................................................................... 23 2 14 0.07 1 0 0 0 1 0 0 0 0 0
.........................................................................AAAAAAAAAAAAAAAAAATGAGC........................................................................................................................................................... 23 1 20 0.05 1 0 0 0 1 0 0 0 0 0
.........................................................................AAAAAAAAAAAAAAAAAATGCGCAT......................................................................................................................................................... 25 2 20 0.05 1 0 0 0 1 0 0 0 0 0
...............................................................................AAAAAAAAAAAATGAGAGT......................................................................................................................................................... 19 1 20 0.05 1 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:6456196-6456446 + dvi_18660 GC----------------------AGC---AAA-CAGCGGGTAATCAATGTTCTTAACTGGTCAATGAACC----------ACACGG---------T-------------------------AACCCATTGTGCCCGCGTTCGTTTTTTTTTTTTTTTTTTACTCTTAGTTTT-----------------AGC----------------------------------------------CTTTGTTTTGCTGG---------------------CATTG-----CTAATGAAATTACATACAAA-ATTAATATCAATTTTTT--TCTCTCTAC----------------------------------------------CCTTCTCTATCTGCCTCTTCTTCGGCCCAGTCGCAAAAACTCTCTGGTCGTTCGCACACAGCTGAGCGTACGCGTTCATG
droMoj3 scaffold_6680:4770412-4770694 + GC----------------------AGC---AAA-CAGCGGGTAATCAATGTTCTTAACTGGTCAATGAACCAC-------CACACGGTGC------T-------------------------AACCCATTGTG------------------------TTTTACTTTTAGTTTT------CTTTTTGCCCGTGT----------------------------------------------CTTTGTCTTGCTGC---------------------CATTG-----CTAATGAAATTACATACAAA-ATTAATATCAATTTTTG--TTCCACTACCTCGCTCTAACTCTGTCTACCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTT----CT---CTTTTGCAGTCGCAAAAATTCTTTGGTTATTCGCACACAGCTGAGCGTTCGCGTTCATG
droGri2 scaffold_15110:6301525-6301824 - CC----------------------AGC---AAA-CAGCGGGTAATCAATGTTCTTAACTGGTCAATGAACC----------ACACGG---------T-------------------------ATCCCATTGTG------------------------TTTTACTCTTAGTTTTGTTGCGCCTTTCTGCTGGGTTGGGTTGGGTTTGGTTCTGTTTTTTTTTCTTTTTCGTTGTGTTGTATTTTGTTTTGT--------------------TGCCCATTG-----CTAATGAAATTACATACAAA-ATTAATAACAATTTTTCTCTTCTACTA--------------------------------TCTCTCTCTCTCTCTCTTTCTCTGTCT----CT---CTCTTGCAGTCGCAAAAACTCATTGGTCATTCGCACACAGCTGAGTGTTCGCGTTCATG
droWil2 scf2_1100000004511:8056681-8056920 - AC----------------------AAA---AAG-CAGCGGGTAATCAATGTTCTTAAGTGGTCAATGAACCAAGC---------------------T-------------------------TCCCCATTGTG------------------------TTTTACTTTTAGTTTT------G---------------------TTTTGTTTTCTATTTTTTGCTCAA------------T--------------------GCCTTGGTCTTTTGCCCATTG-----CTAATGAAATTACATACAAA-ATTAATTTCAATTTTTT---------AC----------------------------------------------CATTATTTATTTACTTTT---TTTTTTCAGTCGCAAAAACTCTTTGGTAGTTCGTACTCAGCTGAGTGTACGCGTTCATG
dp5 XR_group8:8800686-8800918 - GC----------------------AGC---AAAGCAGCGGGTAATCAATGCTCTTAACTGGTCAATGAACCCTCCCTCTCCACCCAG---------CAGGCAGGCACTGCTGTTTGCCCCCC-------------------------------------------------------------------------------------------------------CACATAGTG------------------------------------TGCCCTGAGAAATTCAAACAATATTACA-----A-ATCAAT-GCAATATTACAAATCTAATA--------------------------------TCTGTTTATAT-------ATTTTATAT----TT---TTTGAACAGCCGCAAAAACTCTCTGGTGGTACGCACACAACTGAATGTGCGCGTGCATT
droPer2 scaffold_50:405536-405775 + GC----------------------AGC---AAAGCAGCGGGTAATCAATGCTCTTAACTGGTCAATGAACCCTCCCTCTCCACCCAGTGGACCCAGCAGGCAGGCACTGCTGTTTGCCCCCC-------------------------------------------------------------------------------------------------------CACATAGTG------------------------------------TGCCCTGAGAAATTCAAACAATATTACA-----A-ATCAAT-GCAATATTACAAATCTAATA--------------------------------TCTAATTATAT-------ATTTTAT------AT---TTTGAACAGCCGCAAAAACTCTCTGGTGGTACGCACACAACTGAATGTGCGCGTGCATT
droAna3 scaffold_13337:7863884-7864204 - GACTGGGGTGAAGCGAGGCGATCAGAGCACCAG-CAGCGGGTAATCAATGTTCTTAACTGGTCATTGAACTGGCCAATAGCTGCTCG---------AAGGGAGAGGCTTTTGGGATGCCAGCCACCCATTGCG------------------------TTTTAAATTAAATGAA------CTTTTTGGAAGGGCATGCATAGCTTTGGCATCGAACTATTGATTAA------------TTGTTTGTTTAGAGGCCAGAGCCCTTAAGCTTCCGCTCTT-------CCAATATAATAATATCCAAAAATTAATAAAAATTT----------------------------------------------------------------------------CT---AATCCACAGCCGCAAGAACTCCCTGGTGGTGCGAACGCAGCTCAATGTCCGCGTGCAGG
droBip1 scf7180000396541:18428-18480 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGCAAGAACTCCCTGGTGGTGCGAACGCAGCTGAATGTGCGCGTGCAGG
droKik1 scf7180000302474:179360-179428 - TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTA---CT---TCTTCACAGCCGTAAGAACTCTCTGGTGGTGCGAACGCAGCTGAATGTGCGCGTGCATG
droFic1 scf7180000452451:102345-102415 - AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCATTT----TC---TTTCCGCAGTCGCAAGAACTCCCTGGTGGTGCGAACGCAGTTGAATGTGCGCGTACACG
droEle1 scf7180000490564:2520-2583 + TT----------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---GACCCACAGCCGCAAGAACTCTCTGGTGGTGCGAACGCAGCTGAATGTGCGCGTGCACG
droRho1 scf7180000766314:10394-10446 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGGAAGAATTCCCTGGTTGTGCGAACGCAGTTGAATGTGCGCGTGCACG
droBia1 scf7180000300910:2428460-2428512 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGCAAGAACTCCCTGGTGGTGCGAACGCAGCTAAATGTGCGCGTGCACG
droTak1 scf7180000415356:440379-440454 - TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------------AATTCTCTATCT----AT---TTTCCTCAGCCGCAAGAACTCACTGGTGGTGCGAACGCAGTTGAATGTGCGCGTGCACG
dm3 chr3L:8778096-8778148 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGCAAAAACTCTCTGGTGGTGCGAACGCAGTTAAATGTGCGCGTACAAG
droSim2 3l:8567120-8567164 + GT----------------------GGG---CAC-CAGCGGGTAATCAATGTTCTTAACTGGTCAATGAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_0:1055028-1055072 + GT----------------------GGG---CAC-CAGCGGGTAATCAATGTTCTTAACTGGTCAATGAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3L:3131586-3131638 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGCAAGAACTCGCTGGTGGTGCGAACGCAGTTAAATGTGCGCGTGCATG
droEre2 scaffold_4784:5262187-5262266 - GT------------GAGGCGCAGTGGG---CAC-CAGCGGGTAATCAATGTTCTTAAGCGGGCAATGAACCGGGTTT-------------------T-------------------------AACTCCATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC----------------------------------------AGAGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GC----------------------AGC---AAA-CAGCGGGTAATCAATGTTCTTAACTGGTCAATGAACC----------ACACGG---------T-------------------------AACCCATTGTGCCCGCGTTCGTTTTTTTTTTTTTTTTTTACTCTTAGTTTT-----------------AGC----------------------------------------------CTTTGTTTTGCTGG---------------------CATTG-----CTAATGAAATTACATACAAA-ATTAATATCAATTTTTT--TCTCTCTAC----------------------------------------------CCTTCTCTATCTGCCTCTTCTTCGGCCCAGTCGCAAAAACTCTCTGGTCGTTCGCACACAGCTGAGCGTACGCGTTCATGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAACTCTCTGGTCGTT............................2113.003000000000000000001000000000000000001000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGGTCGTTCGCACACAGCT.................2313.003200000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCAAAAACTCTCTGGTCGTTCGC.........................2612.002100000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTCTGGTCGTTCGCA........................1912.002001000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCACACAGCTGAGCGTACG........2312.002000000000000000000002000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCTCTGGTCGTTCGCA........................2112.002002000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACACAGCTGAGCGTACGCGTTCAT.2712.002000000000001000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCTGGTCGTTCGCACACAGCT.................2512.002200000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGTCGTTCGCACACAGCTG................2211.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTCGCAAAAACTCTCTGGTCGTT............................2611.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTGGTCGTTCGCACA......................1911.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGCGTACGCGTTCATG2011.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGTCGTTCGCACACAGCT.................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAACTCTCTGGTCGT.............................2011.001000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAACTCTCTGGTCGTTCG..........................2311.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTCGTTCGCACACAGCTGAGCGTACG........2911.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCTCTGGTCGTTCGC.........................2011.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTCTGGTCGTTCGCACACA....................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGAGCGTACGCGTTCAT.2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTCTGGTCGTTCGCAC.......................2011.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGGTCGTTCGCACA......................1811.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCGCAAAAACTCTCTGG.................................2011.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCTCTGGTCGTTCGCACACAGC..................2711.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGCTGAGCGTACGCGTTCAT.2411.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGGTCGTTCGCACACA....................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAGCGTACGCGTTCA..1911.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGCGTACGCGTTCAT.1911.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCTGAGCGTACGCGTTCA..2211.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAACTCTCTGGTCGTTCGCA........................2511.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCTCTGGTCGTTCGCACA......................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGGTCGTTCGCACAC.....................1911.001000000000000000000010000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AAACTCTCTGGTCGTTCGCACAC.....................2311.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTCGTTCGCACACAGCT.................2011.001000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGTCGTTCGCACACAGCTGAGC.............2611.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTTTTTTTTTTTTTTTTT..........................................................................................................................................................................................................................................................................................................18200.306000600000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CGTTCGTTTTTTTTTT..................................................................................................................................................................................................................................................................................................................16200.051000000000000000000000000000000000000000000000000000000000000001
droMoj3
GC----------------------AGC---AAA-CAGCGGGTAATCAATGTTCTTAACTGGTCAATGAACCAC-------CACACGGTGC------T-------------------------AACCCATTGTG------------------------TTTTACTTTTAGTTTT------CTTTTTGCCCGTGT----------------------------------------------CTTTGTCTTGCTGC---------------------CATTG-----CTAATGAAATTACATACAAA-ATTAATATCAATTTTTG--TTCCACTACCTCGCTCTAACTCTGTCTACCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTT----CT---CTTTTGCAGTCGCAAAAATTCTTTGGTTATTCGCACACAGCTGAGCGTTCGCGTTCATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTATTCGCACACAGCTG................2111.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTTATTCGCACACAGCTGAGCG............2711.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGCTGAGCGTTCGCGTTCA..2311.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTTATTCGCACACA....................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTGAGCGTTCGCGTTCA..2111.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTGAGCGTTCGCGTTCAT.2211.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGAGCGTTCGCGTTCA..2011.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCACACAGCTGAGCGTTCGCG......2511.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCACACAGCTGAGCG............1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCACACAGCTGAGCGTTCGCGTTC...2811.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACACAGCTGAGCGTTCG........1911.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCTGAGCGTTCGCGTTCA..2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACACAGCTGAGCGTTCG........2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................................CTCTCTCTCTCTCTCTCTC.........................................................................19200.051100000
droGri2
CC----------------------AGC---AAA-CAGCGGGTAATCAATGTTCTTAACTGGTCAATGAACC----------ACACGG---------T-------------------------ATCCCATTGTG------------------------TTTTACTCTTAGTTTTGTTGCGCCTTTCTGCTGGGTTGGGTTGGGTTTGGTTCTGTTTTTTTTTCTTTTTCGTTGTGTTGTATTTTGTTTTGT--------------------TGCCCATTG-----CTAATGAAATTACATACAAA-ATTAATAACAATTTTTCTCTTCTACTA--------------------------------TCTCTCTCTCTCTCTCTTTCTCTGTCT----CT---CTCTTGCAGTCGCAAAAACTCATTGGTCATTCGCACACAGCTGAGTGTTCGCGTTCATGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AC----------------------AAA---AAG-CAGCGGGTAATCAATGTTCTTAAGTGGTCAATGAACCAAGC---------------------T-------------------------TCCCCATTGTG------------------------TTTTACTTTTAGTTTT------G---------------------TTTTGTTTTCTATTTTTTGCTCAA------------T--------------------GCCTTGGTCTTTTGCCCATTG-----CTAATGAAATTACATACAAA-ATTAATTTCAATTTTTT---------AC----------------------------------------------CATTATTTATTTACTTTT---TTTTTTCAGTCGCAAAAACTCTTTGGTAGTTCGTACTCAGCTGAGTGTACGCGTTCATGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTGGTAGTTCGTACTC.....................2111.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTTTGGTAGTTCGTACT......................2111.00110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTAGTTCGTACTCAGCTGA...............2311.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTAGTTCGTACTCAGCTGA...............2211.00110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGGTAGTTCGTACC......................1811.00110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGGTAGTTCGTACTCA....................2011.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAACTCTTTGGTAGTTCGT.........................2411.00101000
dp5
GC----------------------AGC---AAAGCAGCGGGTAATCAATGCTCTTAACTGGTCAATGAACCCTCCCTCTCCACCCAG---------CAGGCAGGCACTGCTGTTTGCCCCCC-------------------------------------------------------------------------------------------------------CACATAGTG------------------------------------TGCCCTGAGAAATTCAAACAATATTACA-----A-ATCAAT-GCAATATTACAAATCTAATA--------------------------------TCTGTTTATAT-------ATTTTATAT----TT---TTTGAACAGCCGCAAAAACTCTCTGGTGGTACGCACACAACTGAATGTGCGCGTGCATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................AAACTCTCTGGTGGTACGCA........................2012.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAACTCTCTGGTGGTACGCACA......................2611.0010000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGGTGGTACGCACACA....................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAACTCTCTGGTGGTACGCACAC.....................2711.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACTCTCTGGTGGTACGCACACA....................2611.0010001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGGTGGTACGCACACAA...................2111.0010100000000
droPer2
GC----------------------AGC---AAAGCAGCGGGTAATCAATGCTCTTAACTGGTCAATGAACCCTCCCTCTCCACCCAGTGGACCCAGCAGGCAGGCACTGCTGTTTGCCCCCC-------------------------------------------------------------------------------------------------------CACATAGTG------------------------------------TGCCCTGAGAAATTCAAACAATATTACA-----A-ATCAAT-GCAATATTACAAATCTAATA--------------------------------TCTAATTATAT-------ATTTTAT------AT---TTTGAACAGCCGCAAAAACTCTCTGGTGGTACGCACACAACTGAATGTGCGCGTGCATTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGGTGGTACGCACACA....................2011.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AAACTCTCTGGTGGTACGCA........................2011.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAATGTGCGCGTGCA..1811.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCTCTGGTGGTACGCACAC.....................2411.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTCTGGTGGTACGCACACA....................2311.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAACTGAATGTGCGCGT.....2011.001010000
droAna3
GACTGGGGTGAAGCGAGGCGATCAGAGCACCAG-CAGCGGGTAATCAATGTTCTTAACTGGTCATTGAACTGGCCAATAGCTGCTCG---------AAGGGAGAGGCTTTTGGGATGCCAGCCACCCATTGCG------------------------TTTTAAATTAAATGAA------CTTTTTGGAAGGGCATGCATAGCTTTGGCATCGAACTATTGATTAA------------TTGTTTGTTTAGAGGCCAGAGCCCTTAAGCTTCCGCTCTT-------CCAATATAATAATATCCAAAAATTAATAAAAATTT----------------------------------------------------------------------------CT---AATCCACAGCCGCAAGAACTCCCTGGTGGTGCGAACGCAGCTCAATGTCCGCGTGCAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCCTGGTGGTGCGAACGCAGCTCA...............2812.002200000
...................GATCAGAGCACCAG-CAGCGGGTAATC.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTCCCTGGTGGTGCGAAC.......................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGCGAACGCAGCT.................1811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTCCCTGGTGGTGCGAA........................2111.001100000
...................................................................................................................................................................................................GCATAGCTTTGGCATCGAA.....................................................................................................................................................................................................................................................1911.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCCTGGTGGTGCGAACGCAGCT.................2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCCTGGTGGTGCGAACG......................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTCCCTGGTGGTGCGAACGCA....................2511.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGGTGGTGCGAACGCAGCTCA...............2511.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCCTGGTGGTGCGAAC.......................2011.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGAACTCCCTGGTGGTGCG..........................2311.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGGTGGTGCGAACGCA....................2011.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCCTGGTGGTGCGAACGCAGC..................2511.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGAACGCAGCTCAATGTC..........2211.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAATGTCCGCGTGCA..1911.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAACTCCCTGGTGGTGCGAACGCA....................2411.001100000
droBip1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGCAAGAACTCCCTGGTGGTGCGAACGCAGCTGAATGTGCGCGTGCAGGSizeHit CountTotal NormTotal
No Reads
droKik1
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTA---CT---TCTTCACAGCCGTAAGAACTCTCTGGTGGTGCGAACGCAGCTGAATGTGCGCGTGCATGSizeHit CountTotal NormTotal
No Reads
droFic1
AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCATTT----TC---TTTCCGCAGTCGCAAGAACTCCCTGGTGGTGCGAACGCAGTTGAATGTGCGCGTACACGSizeHit CountTotal NormTotal
No Reads
droEle1
TT----------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---GACCCACAGCCGCAAGAACTCTCTGGTGGTGCGAACGCAGCTGAATGTGCGCGTGCACGSizeHit CountTotal NormTotal
No Reads
droRho1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGGAAGAATTCCCTGGTTGTGCGAACGCAGTTGAATGTGCGCGTGCACGSizeHit CountTotal NormTotal
No Reads
droBia1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGCAAGAACTCCCTGGTGGTGCGAACGCAGCTAAATGTGCGCGTGCACGSizeHit CountTotal NormTotal
No Reads
droTak1
TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------------AATTCTCTATCT----AT---TTTCCTCAGCCGCAAGAACTCACTGGTGGTGCGAACGCAGTTGAATGTGCGCGTGCACGSizeHit CountTotal NormTotal
No Reads
dm3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGCAAAAACTCTCTGGTGGTGCGAACGCAGTTAAATGTGCGCGTACAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCTCTGGTGGTGCGAA........................2116.0060000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCTCTGGTGGTGCGAACGCA....................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCTGGTGGTGCGAA........................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGTGGTGCGAACGCA....................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCTGGTGGTGCGAACGCA....................2214.0040000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGTGGTGCGAACGC.....................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGTTAAATGTGCGCGTACA..2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTTAAATGTGCGCGTACA..2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGGTGGTGCGAACG......................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGTTAAATGTGCGCGTAC...2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAATGTGCGCGTACA..1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTGGTGGTGCGAACGCA....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAGTTAAATGTGCGCGTACA..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGCGAACGCAGTT.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGTTAAATGTGCGCGTACAA.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAACGCAGTTAAATG............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAATGTGCGCGTACAAG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGTTAAATGTGCGCG......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTCTGGTGGTGCGAACGCAGTT.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGTTAAATGTGCGCGTACA..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAATGTGCGCGTACAA.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTGGTGGTGCGAACGCAGT..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCTGGTGGTGCGAACGA.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCTGGTGGTGCGAACGCAGT..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCTCTGGTGGTGCG..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGTTAAATGTGCGC.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTCTGGTGGTGCGAA........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAACTCTCTGGTGGTGCGA.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCTCTGGTGGTGCGAACG......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGCAAAAACTCTCTGGT................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGCGAACGCAGTTAAATGTGCGCGTACAAG3511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCTGGTGGTGCGAACGC.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAACTCTCTGGTGGTGCGAAC.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAAAAACTCTCTGGTGGTGCGAA........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTCTGGTGGTGCGA.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAACTCTCTGGTGGTGCGAA........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTCTGGTGGTGCGAACGCA....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAGTTAAATGTGCGCGTACAAG2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTGGTGGTGCGAACGCAGTTA................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGTGGTGCGAACGCAG...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GT----------------------GGG---CAC-CAGCGGGTAATCAATGTTCTTAACTGGTCAATGAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
GT----------------------GGG---CAC-CAGCGGGTAATCAATGTTCTTAACTGGTCAATGAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................GGTAATCAATGTTCTTAACTG...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
droYak3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGCAAGAACTCGCTGGTGGTGCGAACGCAGTTAAATGTGCGCGTGCATGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGCAGTTAAATGTGCGCGT.....2211.00100000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGAACTCGCTGGTGGTGCGAACG......................2711.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGAACTCGCTGGTGGTGCGAA........................2511.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTCGCTGGTGGTGC...........................1811.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCTGGTGGTGCGAACGCAGTTAAA..............2711.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGCGAACGCAGTTAAATGTGCGCGT.....2911.00100010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAACTCGCTGGTGGTGCGAAC.......................2111.00100000010000
droEre2
GT------------GAGGCGCAGTGGG---CAC-CAGCGGGTAATCAATGTTCTTAAGCGGGCAATGAACCGGGTTT-------------------T-------------------------AACTCCATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC----------------------------------------AGAGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................AATCAATGTTCTTAAGCGGGCA...........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..........................................AATCAATGTTCTTAAGCGGGCAATG........................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000

Generated: 05/16/2015 at 08:36 PM