ID:

dvi_18654

 Coordinate:

scaffold_13049:6401389-6401539 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.8 -21.7 -21.6

Flybase annnotation

CDS [Dvir\Prm-cds]; exon [dvir_GLEANR_12279:1]; intron [Dvir\Prm-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATGTGAACATCGAATACATTACTGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGGATCAAAGGATCGCCGGAGCAGGGGATCAGAGTGCAACTGGATATGCTCGAGAAAAACTGAAACAGAAAACTCTACAAAAAAAAAAAAAAATAGTGAAAAATTGCCGTTCGATTGCAAAAGTATCTTAAAGTTGTTTAAATCGAATGTATCTGTGCCTAACTGACTGCAAATGTATCTAAACCTCGTAAAAATGTA
**************************************************((((...(((...((((.((......)).))))(((((....(((.......................)))...)))))....................)))....)))).((((((((((((...((...))...))))...))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 M061
embryo
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 M027
male body		 M047
female body
 SRR060659
Argentina_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060679
140x9_testes_total
 SRR1106724
embryo_12-14h
 SRR1106728
larvae
 SRR1106730
embryo_16-30h
 GSM1528803
follicle cells
..........................TTGAGCTCGCTCTCCCGCTTGGAGGAT...................................................................................................................................................................................................... 27 2 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
..................TTACTGACTTGAGCTCGCTCTCCCGC............................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TTACTGACCTGAGCTCGCTCT.................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TGACTTGAGCTCGCTCTCCCGCT.............................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................TTACTGACTTGAGCTCGCTCTCCCGCC.............................................................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TGAGCTCGCTCTCCCGCTTGGAGGAT...................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGGATCAAAGGATCGCCGGAGCAGGGGATCAGAGTGCAAC.............................................................................................................................................................. 43 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................TGACTTGAGCTCGCTCTCC.................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........ATCGAATACATTACTGACTTGAGCTC......................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............TACATTACTGACTTGAGCTCGCTCT.................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CTGACTTGAGCTCGCTCTCC.................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TTACTGACTTTAGCTCGCTCTCCC................................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................ATTACTGACTTGAGCTCGCTCTCCCGC............................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................TGAGCTCGCTCTCCCGCTTGGAGG........................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
ATGTGAACATCGAATACAT........................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................GACTTGAGCTCGCTCTCCCGCTTGGAGG........................................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................TTACTGACTTGAGCTCGCTCTCCCGCTTG............................................................................................................................................................................................................ 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................GACTTGAGCTCGCTCTCCCGCTT............................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................ATTTCCGCTCGATTGCAAAAG........................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................ATTACTGACTTGAGCTCGCT...................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TTACTGACTTGAGCTCGCCCTCCCGCG.............................................................................................................................................................................................................. 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........ATCGAATACATTACTGACTTGAGCT.......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....GAACATCGAATACATTACTGACTTGAGCTCGCTCTCCCGCTTGG........................................................................................................................................................................................................... 44 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........CGAATACATTACTGACTTGAGCT.......................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................TACTGACTTGAGCTCGCTCTCCCGCT.............................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............ACATTACTGACTTGAGCTC......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................CGCTCTCCCGCTTGGAGGAT...................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................GAGCTCGCTCTCCCGCTTGGAGGAT...................................................................................................................................................................................................... 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................ACTGACTTGAGCTCGGT...................................................................................................................................................................................................................... 17 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........CAAATACACTTCTGACTTGA............................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TACACTTGTAGCTTATGTAATGACTGAACTCGAGCGAGAGGGCGAACCTCCATTCCTAGTTTCCTAGCGGCCTCGTCCCCTAGTCTCACGTTGACCTATACGAGCTCTTTTTGACTTTGTCTTTTGAGATGTTTTTTTTTTTTTTTATCACTTTTTAACGGCAAGCTAACGTTTTCATAGAATTTCAACAAATTTAGCTTACATAGACACGGATTGACTGACGTTTACATAGATTTGGAGCATTTTTACAT
**************************************************((((...(((...((((.((......)).))))(((((....(((.......................)))...)))))....................)))....)))).((((((((((((...((...))...))))...))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060676
9xArg_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 GSM1528803
follicle cells		 SRR060659
Argentina_testes_total
.................................................................................................................................................................CAAGCTAACGTTTTCATAGAA..................................................................... 21 0 1 1.00 1 1 0 0 0
........TCGCTTATGTCCTGACTGAACT............................................................................................................................................................................................................................. 22 3 1 1.00 1 0 1 0 0
....................................................................................................................................................CGCTTTTAAAGGGCAAGCTA................................................................................... 20 3 8 0.13 1 0 0 0 1
................................................ACCATTCCGAGTTTCCTA......................................................................................................................................................................................... 18 2 8 0.13 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:6401339-6401589 - dvi_18654 ATGTGAACATCGAATACATTACTGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATCAAAGGA-------------------TCGC---------------------------------CGGAGCAGG----GGATCAGAGTG----------CAACTGGATATGC--TC------------------------------GAGAA-AA-------ACTGAAAC--------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------GAA----------------------------------------------------------------------------------------AACTCTACAAAAAAAAAAAAAAATAGTGAAAAATTGCCGTTCGA-----TTGCAA--AAGTATCTTAAAGTTG--------------TTTAAATCGAATG------------------------------------------------TATCTGTGCCTAACTGACTGC-AAATGTATCTAAAC---------------------------------------------C-TCGTA-AAAATGTA
droMoj3 scaffold_6680:4721323-4721527 - ATGTGAACATCGAATACATTACCGACATGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATCGAGGCAACAAA----------------------------------------C-------------------------------------------------CAGGAAGACAACTGTTAA----------------------------------------------CAAAAA-------TCT-GAAAAAAAAAGAAAAAATTC------------------------------------------------------------------------------AAA----TGTGCAATAAA--------------------ACTCGCAAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTC--------------------------------------------------------------------GAAAAGTTGAAAAGTATCTGT--------GACTGCGAAATCTATCTAAGA---------------------------------------------T-ATGTA-CAAATGTG
droGri2 scaffold_15110:6342477-6342772 + ATGTGAACATCGAATACATCGCCGACATGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATCAAAC-A----------------------------------------AAGA-----------CTGGATACGC----------------------------------------CC------------------------------GCGAT-AATAAAAAA------A----AA-------ACT-----------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------AAAAA------------A------------AAACTAAAA-------------------------------------AAAGA-AACTCGAAAAACTCTACAAAAGAAAA--------GTGA------------CGAAATCTTAGCAA--AAGTATCTGAAAGCTGCGAGCAGCAAATGTTTAAAATCCAACG-----TATTTCGT----------------------------------------GTGGCTAAATGACTGA-AAATGTATCTACAAATCGTACATATATGTATGCATATATT-------CAAATATATA--T-CTATA-TAAATATA
droWil2 scf2_1100000014817:1238-1367 - ACACACTCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA---------------------------------------------------------------------------------------------------------------ATATATAAATAAATAAAAAA----------------AAAAAAA--------------------AAAAACAAAAAAATAAAAAAAT----------------------------------------------------------------------------------ATAATAAGGATA---------------------------------------------ATAATGC-AGATGTA-----------------------------------------------------------TATTAGTGTACG--TGTG-------TGCATATGTA--T-GTGTG-TGTGTGTA
dp5 XR_group8:8851329-8851670 + dps_3394 ATGTCAACATCGAATACATCCAGGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGAGACC-AAC-G----------------------TCA-ACGG-AC--------AGT-----------CCGGTTCAGG----CCACCCATCTC----------TAACCCCCAAAAA--TCGAAGGAA----------------TCTCAACGAGAA-AATAAAAAA------A----AAAAGAAAAACCAA-----AAAATAA----TCA------------------------------------------------------------------------------AAATGCGTGTGCGCCAAATTTTTTTTTATTTTTTTTAAACCCACGAGAATTTTTTTTTTGCTCTCTCTCTCTCGAGATTATCGGT--GTCTGTGT--AGA-ACAGAAA----------AGAGA-----------ATCAAGAAA-----TAAG---------------------------AAAAAACAAACTAAGAAAACCCGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-AAATTCATCTACAC---------------------------------------------T-CTATATCAAATACA
droPer2 scaffold_50:354736-355076 - ATGTCAACATCGAATACATCCAGGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGAGACC-AAC-G----------------------TCA-ACGG-AC--------AGT-----------CCGGTTCAGG----CCACCCATCTC----------TAACCCCCAAAAA--TCGAAGGAA----------------TCTCAACGAGAA-AA-AAAAAA------A----AAAAGAAAAACCAA-----AAAATAA----TCA------------------------------------------------------------------------------AAATGCGTGTGCGCCAAATTTTTTTTTATTTTTTTTAAACCCACGAGAATTTTTTTTTTGCTCTCTCTCTCTCGAGATTATTGGT--GTCTGTGT--AGA-ACAGAAA----------AGAGA-----------ATCAAGAAA-----TAAG---------------------------AAAAAACAAACTAAGAAAACCCGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-AAATTCATCTACAC---------------------------------------------T-CTATATCAAATACA
droAna3 scaffold_13337:7902756-7902999 + ACGTCCAAATCGACTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAATAGATC-T----------------------------A-TCGG-AT--------GTTTCAA---------------GG----ATTTCCAACTC------------------------------------------------------------------------------------------------------------------------------------------------------------GATCGATTTTCAAACTTGCAA--TAAATTTCAAAACCAGAATGCGTGTGCGCCAAATT--------------------CTACAAGAATC-------GACTCTCGTTCTCTTTAA--TCTCGGTGTGTCTGTGT--AGAGACAGAACGAAAAAAAAAA----------------AAAAATA--------------------AGAATCAAGATAATAGAAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA
droBip1 scf7180000396541:59253-59505 + ATGTCCAAATCGACTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAATAGATC-C----------------------------A-TCGG-ATAT------ATTTCAAGGATATTTCAATCCAAT----CC---------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCGATTGGGAAACTTTTAAATGAAATTTAAAAAACAGAATGCGTGTGCGCCAAATT--------------------CTACAAGAATC-------GGCTATCGTTCTCTTCAA--TCTCGGTGTGTCTGTGT--AGAGACAAAAA----------A----------------TTAAGAAA--------------------AAG-----ATAATAGAAAAAAACAAAATAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACGTA
droKik1 scf7180000302474:227992-228218 + ATGTCAACATCGAATACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGGATC-C--------------------------CCT-GCGG-AT--------GGTCC-------------------------------------------------CCTGAAGA--TCCGCGGA----------------------------------------------CCAATG-------CCA-GGGATTAAAATCGAAAATCG------------------------------------------------------------------------------AAATGCGTGTGCGCCGAATTTC----------TATTAAATCTACGAGAATTC--------CTCTCTCTCTTTCGCCTTTCGCGGT--ATCTGTGTGTAGAAGC-----------------------GCAAAATAATCAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-AAAATATA
droFic1 scf7180000454107:1523919-1523977 - AAAAACTGAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------AAAAA------------A------------ACGCCAAAAAAGG--------TCAGAG--------------------ACAA-TT-----------------------------------AGCAAGT--------------------------GTCGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGA
droEle1 scf7180000490629:15208-15272 + ATTGGGGAATTAGTTTAATTATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATGTATATATGTA-------TATATGTATA--T-ATGTA-TATATGTA
droRho1 scf7180000757774:437-738 - ATGTGAACATCGAATACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATCGCACCG-----------------GATCGC-A-TCGG-ATT-GGAT-CGTT-----------TCGGATCGGGATCGTGATCGGTCT------------------------------TGGAATCAAGTCGCTAAAAAATTCCTATCAGGCAAA------------------------------------TA-----CGA--ACG------------------------------------------------------------------------------AAATGCGTGTGCGCCAAA---------------------TCTACGAGAATTT------------CTCTCTCTT--A--TTTCGGT--GTCTGTGT--AGAGACTGAAA----------A-AGAATTAGAAAATAATCAAGAAAAAAAATAAG---------------------------A-AAAACAAAATAAAA-AACCCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTCATCTACAC---------------------------------------------C-GTATA-----TCAA
droBia1 scf7180000302088:455251-455362 - AAAAAAAAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTGC-----AAAATAGCTAATGGAAATGGATTTATTACTGAAATATGTAGAAATATTTAACTCGATAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACACATA--TAATGCA-AAAATATA
droEug1 scf7180000409110:126455-126582 + TCTAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------AGT-------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------AAGAA------------A------------ACACAAAAAAAAA--CAAAA---C-----------------------AAAA-TAAACAAC-----------------------------------A-------------------A---------------------------------------------ATTCATCTTCTACTTGTTCTACCGCTTCAACTT-----------------------------------------------------------TATTCGTCTTCG--TCTCCGT----AATAAATATA--T-TTAAA-AAAATATA
dm3 chrX:15720822-15720928 - TCTACGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAAAATCAAAA------------------------------A---------------------------------------------ATGCGTATTTGCTGTAGTCA----TATATACTTTAGAGCATA--------------------------------------------------AATATGTTATAT--TATTTGGTAAATATATATATA--T-ATTAA-TATATATA
droSim2 3l:8527582-8527640 - ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_17:245349-245480 - AAATACAAATATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA------------A------------ACAAAAAAAAAAACACAAAA---C-----------------------AAAA-CAAACAAC-----------------------------------A-------------------A---------------------------------------------ATTCATCTTCTACTTCTTCTACCGCTTCAACTT-----------------------------------------------------------TATTCGTCTTCG--TCTCCGT----AATATATATACAT-ATATATAAAATATA
droYak3 3L:3172269-3172559 + ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATCGTCCCGTCCCGTCTCGGAATCGAGATCGC-AATCGAAATT-GGATGCGGA-----------TTGGATCGGCATCG-GATTAGAGCCCGAAATCCCAAAATCCCCAAAAG--ACGTTGGAA----------------TTTCGACCAGGG-AA------------------------------------TA-----GGAATACG------------------------------------------------------------------------------AAATGCGTGTGCGCCAAATTTC----------TTCAAAATCTACGAGAATTT------------CTCTCTCTT--G--TTTCGGT--GTCTGTGT--AGAGACTGAAA----------A-AGAATCAGAATATAATCAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA
droEre2 scaffold_4904:136-257 - AAAGGTTAGTGAA----------------------------------------------C-C--------------------------TTT-G------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTGG-----TCACTTCGAAATATCACGCGATAG--------------AAAAGAACGAAAA------------------------------------------------TGTATGTGTT----------------------------------TGTATGTATATATATGTA-------TGTATATATA--T-GTATG-TATATATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATGTGAACATCGAATACATTACTGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATCAAAGGA-------------------TCGC---------------------------------CGGAGCAGG----GGATCAGAGTG----------CAACTGGATATGC--TC------------------------------GAGAA-AA-------ACTGAAAC--------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------GAA----------------------------------------------------------------------------------------AACTCTACAAAAAAAAAAAAAAATAGTGAAAAATTGCCGTTCGA-----TTGCAA--AAGTATCTTAAAGTTG--------------TTTAAATCGAATG------------------------------------------------TATCTGTGCCTAACTGACTGC-AAATGTATCTAAAC---------------------------------------------C-TCGTA-AAAATGTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................TTGAGCTCGCTCTCCCGCTTGGAGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000000000200000000000000000000000000000000000000000000000000000
..................TTACTGACTTGAGCTCGCTCTCCCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
......................TGACTTGAGCTCGCTCTCCCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
..................TTACTGACTTGAGCTCGCTCTCCCGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000000000000000000000000000000000000000000000000000000000000
...........................TGAGCTCGCTCTCCCGCTTGGAGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
..................................................GTAAGG-ATCAAAGGA-------------------TCGC---------------------------------CGGAGCAGG----GGATCAGAGTG----------CAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................4311.001000000000000000000000000000000000000000000000000000000000010000
......................TGACTTGAGCTCGCTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
........ATCGAATACATTACTGACTTGAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
..............TACATTACTGACTTGAGCTCGCTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000000000000000000000000000000000000000000000000000000000000
.....................CTGACTTGAGCTCGCTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
.................ATTACTGACTTGAGCTCGCTCTCCCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
...........................TGAGCTCGCTCTCCCGCTTGGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
ATGTGAACATCGAATACAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
.......................GACTTGAGCTCGCTCTCCCGCTTGGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
..................TTACTGACTTGAGCTCGCTCTCCCGCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000000000000000000000000000000000000000000000000000000000000
.......................GACTTGAGCTCGCTCTCCCGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.................ATTACTGACTTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
........ATCGAATACATTACTGACTTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
....GAACATCGAATACATTACTGACTTGAGCTCGCTCTCCCGCTTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................4411.001000000000000000000000000000000000000000000000000000000001000000
..........CGAATACATTACTGACTTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...................TACTGACTTGAGCTCGCTCTCCCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...............ACATTACTGACTTGAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
.................................CGCTCTCCCGCTTGGAGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
............................GAGCTCGCTCTCCCGCTTGGAGGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
ATGTGAACATCGAATACATTACCGACATGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATCGAGGCAACAAA----------------------------------------C-------------------------------------------------CAGGAAGACAACTGTTAA----------------------------------------------CAAAAA-------TCT-GAAAAAAAAAGAAAAAATTC------------------------------------------------------------------------------AAA----TGTGCAATAAA--------------------ACTCGCAAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTC--------------------------------------------------------------------GAAAAGTTGAAAAGTATCTGT--------GACTGCGAAATCTATCTAAGA---------------------------------------------T-ATGTA-CAAATGTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................GAGCTCGCTCTCCCGCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................TACCGACATGAGCTCGCTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
..GTGAACATCGAATACATTACCGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.....................CCGACATGAGCTCGCTCTCCCGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
ATGTGAACATCGAATACATTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................CCGACATGAGCTCGCTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................ATGAGCTCGCTCTCCCGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
........ATCGAATACATTACCGACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...................TACCGACATGAGCTCGCTCTCCCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
...............ACATTACCGACATGAGCTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............AATACATTACCGACATGAGCTCGCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.......CATCGAATACATTACCGACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
ATGTGAACATCGAATACATCGCCGACATGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATCAAAC-A----------------------------------------AAGA-----------CTGGATACGC----------------------------------------CC------------------------------GCGAT-AATAAAAAA------A----AA-------ACT-----------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------AAAAA------------A------------AAACTAAAA-------------------------------------AAAGA-AACTCGAAAAACTCTACAAAAGAAAA--------GTGA------------CGAAATCTTAGCAA--AAGTATCTGAAAGCTGCGAGCAGCAAATGTTTAAAATCCAACG-----TATTTCGT----------------------------------------GTGGCTAAATGACTGA-AAATGTATCTACAAATCGTACATATATGTATGCATATATT-------CAAATATATA--T-CTATA-TAAATATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ACACACTCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA---------------------------------------------------------------------------------------------------------------ATATATAAATAAATAAAAAA----------------AAAAAAA--------------------AAAAACAAAAAAATAAAAAAAT----------------------------------------------------------------------------------ATAATAAGGATA---------------------------------------------ATAATGC-AGATGTA-----------------------------------------------------------TATTAGTGTACG--TGTG-------TGCATATGTA--T-GTGTG-TGTGTGTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTA--T-GTGTG-TGTGTGTA21200.05100001
dp5
ATGTCAACATCGAATACATCCAGGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGAGACC-AAC-G----------------------TCA-ACGG-AC--------AGT-----------CCGGTTCAGG----CCACCCATCTC----------TAACCCCCAAAAA--TCGAAGGAA----------------TCTCAACGAGAA-AATAAAAAA------A----AAAAGAAAAACCAA-----AAAATAA----TCA------------------------------------------------------------------------------AAATGCGTGTGCGCCAAATTTTTTTTTATTTTTTTTAAACCCACGAGAATTTTTTTTTTGCTCTCTCTCTCTCGAGATTATCGGT--GTCTGTGT--AGA-ACAGAAA----------AGAGA-----------ATCAAGAAA-----TAAG---------------------------AAAAAACAAACTAAGAAAACCCGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-AAATTCATCTACAC---------------------------------------------T-CTATATCAAATACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............AATACATCCAGGACTTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
............AATACATCCAGGACTTGAGCTCGCTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010001000000
..................TCCAGGACTTGAGCTCGCTCTCCCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000000
ATGTCAACATCGAATACATCCAGGACTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
.......................................................................................................................................CCACCCATCTC----------TAACCCCCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........GAATACATCCAGGACTTGAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
.......CATCGAATACATCCAGGACTTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............ATACATCCAGGACTTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......................GACTTGAGCTCGCTCTCCCGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............................................................................................................................................................................................................AA-AATAAAAAA------A----AAAAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
droPer2
ATGTCAACATCGAATACATCCAGGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGAGACC-AAC-G----------------------TCA-ACGG-AC--------AGT-----------CCGGTTCAGG----CCACCCATCTC----------TAACCCCCAAAAA--TCGAAGGAA----------------TCTCAACGAGAA-AA-AAAAAA------A----AAAAGAAAAACCAA-----AAAATAA----TCA------------------------------------------------------------------------------AAATGCGTGTGCGCCAAATTTTTTTTTATTTTTTTTAAACCCACGAGAATTTTTTTTTTGCTCTCTCTCTCTCGAGATTATTGGT--GTCTGTGT--AGA-ACAGAAA----------AGAGA-----------ATCAAGAAA-----TAAG---------------------------AAAAAACAAACTAAGAAAACCCGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-AAATTCATCTACAC---------------------------------------------T-CTATATCAAATACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........CGAATACATCCAGGACTTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.004400000
.............ATACATCCAGGACTTGAGCTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
.....AACATCGAATACATCCAGGACTTGAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.003300000
..........CGAATACATCCAGGACTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.............ATACATCCAGGACTTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
........ATCGAATACATCCAGGACTTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
...............ACATCCAGGACTTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
.............ATACATCCAGGACTTGAGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................ATCCAGGACTTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.........................CTTGAGCTCGCTCTCCCGCTTGGAGGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............ATACATCCAGGACTTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................CCAGGACTTGAGCTCGCTCTCCCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........CGAATACATCCAGGACTTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................CAGGACTTGAGCTCGCTCTCCCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
...........GAATACATCCAGGACTTGAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..GTCAACATCGAATACATCCAGGACTTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...........GAATACATCCAGGACTTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.............ATACATCCAGGACTTGAGCTCGCTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........CGAATACATCCAGGACTTGAGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................TCCAGGACTTGAGCTCGCTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................AGGACTTGAGCTCGCTCTCCCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
droAna3
ACGTCCAAATCGACTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAATAGATC-T----------------------------A-TCGG-AT--------GTTTCAA---------------GG----ATTTCCAACTC------------------------------------------------------------------------------------------------------------------------------------------------------------GATCGATTTTCAAACTTGCAA--TAAATTTCAAAACCAGAATGCGTGTGCGCCAAATT--------------------CTACAAGAATC-------GACTCTCGTTCTCTTTAA--TCTCGGTGTGTCTGTGT--AGAGACAGAACGAAAAAAAAAA----------------AAAAATA--------------------AGAATCAAGATAATAGAAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................GGACCTGAGCTCGCTCTCCCGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002020000
...........GACTACATCCAGGACCTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
...............ACATCCAGGACCTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
..............TACATCCAGGACCTGAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.................ATCCAGGACCTGAGCTCGCTCTCCCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.......AATCGACTACATCCAGGACCTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..............TACATCCAGGACCTGAGCTCGCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................TCCAGGACCTGAGCTCGCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.............CTACATCCAGGACCTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........ATCGACTACATCCAGGACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..........CGACTACATCCAGGACCTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
........ATCGACTACATCCAGGACCTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
............ACTACATCCAGGACCTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..................TCCAGGACCTGAGCTCGCTCTCCCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...............ACATCCAGGACCTGAGCTCGCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..GTCCAAATCGACTACATCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..............TACATCCAGGACCTGAGCTCGCTCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
droBip1
ATGTCCAAATCGACTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAATAGATC-C----------------------------A-TCGG-ATAT------ATTTCAAGGATATTTCAATCCAAT----CC---------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCGATTGGGAAACTTTTAAATGAAATTTAAAAAACAGAATGCGTGTGCGCCAAATT--------------------CTACAAGAATC-------GGCTATCGTTCTCTTCAA--TCTCGGTGTGTCTGTGT--AGAGACAAAAA----------A----------------TTAAGAAA--------------------AAG-----ATAATAGAAAAAAACAAAATAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACGTASizeHit CountTotal NormTotal
No Reads
droKik1
ATGTCAACATCGAATACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGGATC-C--------------------------CCT-GCGG-AT--------GGTCC-------------------------------------------------CCTGAAGA--TCCGCGGA----------------------------------------------CCAATG-------CCA-GGGATTAAAATCGAAAATCG------------------------------------------------------------------------------AAATGCGTGTGCGCCGAATTTC----------TATTAAATCTACGAGAATTC--------CTCTCTCTCTTTCGCCTTTCGCGGT--ATCTGTGTGTAGAAGC-----------------------GCAAAATAATCAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-AAAATATASizeHit CountTotal NormTotal
No Reads
droFic1
AAAAACTGAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------AAAAA------------A------------ACGCCAAAAAAGG--------TCAGAG--------------------ACAA-TT-----------------------------------AGCAAGT--------------------------GTCGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGASizeHit CountTotal NormTotal
No Reads
droEle1
ATTGGGGAATTAGTTTAATTATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATGTATATATGTA-------TATATGTATA--T-ATGTA-TATATGTASizeHit CountTotal NormTotal
No Reads
droRho1
ATGTGAACATCGAATACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATCGCACCG-----------------GATCGC-A-TCGG-ATT-GGAT-CGTT-----------TCGGATCGGGATCGTGATCGGTCT------------------------------TGGAATCAAGTCGCTAAAAAATTCCTATCAGGCAAA------------------------------------TA-----CGA--ACG------------------------------------------------------------------------------AAATGCGTGTGCGCCAAA---------------------TCTACGAGAATTT------------CTCTCTCTT--A--TTTCGGT--GTCTGTGT--AGAGACTGAAA----------A-AGAATTAGAAAATAATCAAGAAAAAAAATAAG---------------------------A-AAAACAAAATAAAA-AACCCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTCATCTACAC---------------------------------------------C-GTATA-----TCAASizeHit CountTotal NormTotal
No Reads
droBia1
AAAAAAAAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTGC-----AAAATAGCTAATGGAAATGGATTTATTACTGAAATATGTAGAAATATTTAACTCGATAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACACATA--TAATGCA-AAAATATASizeHit CountTotal NormTotal
No Reads
droEug1
TCTAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------AGT-------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------AAGAA------------A------------ACACAAAAAAAAA--CAAAA---C-----------------------AAAA-TAAACAAC-----------------------------------A-------------------A---------------------------------------------ATTCATCTTCTACTTGTTCTACCGCTTCAACTT-----------------------------------------------------------TATTCGTCTTCG--TCTCCGT----AATAAATATA--T-TTAAA-AAAATATASizeHit CountTotal NormTotal
No Reads
dm3
TCTACGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAAAATCAAAA------------------------------A---------------------------------------------ATGCGTATTTGCTGTAGTCA----TATATACTTTAGAGCATA--------------------------------------------------AATATGTTATAT--TATTTGGTAAATATATATATA--T-ATTAA-TATATATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAT--TATTTGGTAAATATATC......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGTATTTGCTGTAGTCG----.........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTTAGAGCATA--------------------------------------------------AATATG...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--------------------------------------------------AATATGTTATAT--TATTTTT................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................AGGACCTGAGCTCGCTCTCCCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.00530200000000000000
.................ATCCAGGACCTGAGCTCGCTCTCCCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.00310200000000000000
....................CAGGACCTGAGCTCGCTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00311100000000000000
..........CGAGTACATCCAGGACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00300300000000000000
.....................AGGACCTGAGCTCGCTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00330000000000000000
.................ATCCAGGACCTGAGCTCGCTCTCCCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300300000000000000
......ACATCGAGTACATCCAGGACCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00300300000000000000
....GAACATCGAGTACATCCAGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300300000000000000
..........CGAGTACATCCAGGACCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
..................TCCAGGACCTGAGCTCGCTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
........ATCGAGTACATCCAGGACCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
................CATCCAGGACCTGAGCTCGCTCTCCCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200200000000000000
....GAACATCGAGTACATCCAGGACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
................CATCCAGGACCTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
...............ACATCCAGGACCTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
....................CAGGACCTGAGCTCGCTCTCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
.................................CGCTCTCCCGCTTGGAGGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.50300300000000000000
....................CAGGACCTGAGCTCGCTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.................ATCCAGGACCTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.............GTACATCCAGGACCTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
.................ATCCAGGACCTGAGCTCGCTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
.....................AGGACCTGAGCTCGCTCTCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
............................GAGCTCGCTCTCCCGCTTGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
.........TCGAGTACATCCAGGACCTGAGCTCGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
..................TCCAGGACCTGAGCTCGCTCTCCCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.........TCGAGTACATCCAGGACCTGAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
....................CAGGACCTGAGCTCGCTCTCCCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
............AGTACATCCAGGACCTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
.......CATCGAGTACATCCAGGACCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
...................CCAGGACCTGAGCTCGCTCTCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...............ACATCCAGGACCTGAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
................CATCCAGGACCTGAGCTCGCTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
........ATCGAGTACATCCAGGACCTGAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.........TCGAGTACATCCAGGACCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.....................AGGACCTGAGCTCGCTCTCCCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..........CGAGTACATCCAGGACCTGAGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
droSec2
AAATACAAATATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA------------A------------ACAAAAAAAAAAACACAAAA---C-----------------------AAAA-CAAACAAC-----------------------------------A-------------------A---------------------------------------------ATTCATCTTCTACTTCTTCTACCGCTTCAACTT-----------------------------------------------------------TATTCGTCTTCG--TCTCCGT----AATATATATACAT-ATATATAAAATATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTACTTCTTCTACCGCT.......................................................................................................................2111.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTCTACCGCTTCAACTT-----------------------------------------------------------.....................................................2111.0011000
............AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA------------A------------ACAAAAAAAAAA......................................................................................................................................................................................................................................................................................................18200.0510010
droYak3
ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGG-ATCGTCCCGTCCCGTCTCGGAATCGAGATCGC-AATCGAAATT-GGATGCGGA-----------TTGGATCGGCATCG-GATTAGAGCCCGAAATCCCAAAATCCCCAAAAG--ACGTTGGAA----------------TTTCGACCAGGG-AA------------------------------------TA-----GGAATACG------------------------------------------------------------------------------AAATGCGTGTGCGCCAAATTTC----------TTCAAAATCTACGAGAATTT------------CTCTCTCTT--G--TTTCGGT--GTCTGTGT--AGAGACTGAAA----------A-AGAATCAGAATATAATCAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............GTACATCCAGGACCTGAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200100010000
.............................AGCTCGCTCTCCCGCTTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.....AACATCGAGTACATCCAGGACCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
...................CCAGGACCTGAGCTCGCTCTCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
................CATCCAGGACCTGAGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
..................TCCAGGACCTGAGCTCGCTCTCCCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
.............GTACATCCAGGACCTGAGCTCGCTCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
droEre2
AAAGGTTAGTGAA----------------------------------------------C-C--------------------------TTT-G------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTGG-----TCACTTCGAAATATCACGCGATAG--------------AAAAGAACGAAAA------------------------------------------------TGTATGTGTT----------------------------------TGTATGTATATATATGTA-------TGTATATATA--T-GTATG-TATATATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG-----TCACTTCGAAATATCACGCG................................................................................................................................................................................24200.1022000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGG-----TCACTTCGAAATATCACGCGA...............................................................................................................................................................................26200.0510000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG--------------AAAAGAACGAAAA------------------------------------------------TGTATGTGTT----------------------------------.....................................................26200.0511000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------AAAAGAACGAAAA------------------------------------------------TGTATGTGTT----------------------------------TG...................................................26200.0511000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--------------AAAAGAACGAAAA------------------------------------------------TGTATGTGTT----------------------------------.....................................................25200.0511000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAATATCACGCGATAG--------------AAAAGAACGA....................................................................................................................................................28200.0511000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGCGATAG--------------AAAAGAACGAAAA------------------------------------------------TG...............................................................................................26200.0511000000

Generated: 05/19/2015 at 09:13 PM