ID:

dvi_18631

 Coordinate:

scaffold_13049:6282900-6283050 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.6 -4.3 -4.21

Flybase annnotation

exon [dvir_GLEANR_12982:8]; CDS [Dvir\GJ13061-cds]; intron [Dvir\GJ13061-in]

Repeatable elements

NameClassFamilyStrand
(A)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCTAAACATTCATACATATTCATATATGTGTATGAACTTAACAAAAAATAAAAAAAAAAAAAAAAACAAAATAAAAATAACGTTAAAATTTTCATAACATTATGTTGACAAATAATTATATATAAAATGGCGCTTTCAACGATCTCAATAAAACCTGAAACAATAATCATGAACAAACGTCACGCGCGTACGGACACACAGTTATAAGAAAACTGTTGTCTACGATCCAAGGAATAGCGACACCTACAGAG
***************************************************************************************************************************......((((.....(((...(((........(((........)))))).....)))...))))..........****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 M047
female body
 SRR060667
160_females_carcasses_total
 V053
head
 SRR060672
9x160_females_carcasses_total
 M027
male body		 SRR060665
9_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060689
160x9_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 V047
embryo
 SRR060678
9x140_testes_total
....................................................................................................................................................................................................GACGGTTATAAGAAAACTGTTGTCTACG........................... 28 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TATAAGAAAACTGTTGTCTACGATC........................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AACTGTTGTCTACGATCC....................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GTACGGACACACAGTTATAAGA.......................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AACTGTTGTCTACGATCCAAGGA.................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CCAAGGAATAGCGACACC....... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGAAAACTGTTGTCTACGATCCAAG.................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AAAATGGCGCTTTCAACGATCTCA........................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................ATCCAAGGAATAGCGACACC....... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................TCTACGATCCAAGGAATAGCGACACC....... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CAAGGAATAGCGACGCCTAC.... 20 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ACGATCCAAGGAATAGCGACACCTAC.... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AACGTCACGCGCGTACGGACAC...................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................CTGTTGTCTACGATCCAAGG................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TACGATCCAAGGAATAGCGACACC....... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CGGTTATAAGAAAACTGTTGTC............................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CTACGATCCAAGGAATAGC............. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................AAGAAAACTGTTGTCTACGATC........................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AACTGTTGTCTACGATCCAAGGAA................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TACGATCCAAGGAATAGCGACACCTAC.... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ATAAGAAACCTGTCGTCGAC............................ 20 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................ATGAAATCGCGCTTTCAAC............................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................TGAACAAACCTCACGGACG............................................................... 19 3 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................AAAAAAAAAAAAAAAAAAAAAAAACAAATTAAAAAT............................................................................................................................................................................. 36 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................AAAAAAATAATAAAAAAAAAAAAAACAAAAGAAAAA.............................................................................................................................................................................. 36 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................AAACAAAAAAAAAAAAAAAAAAAAAAAACAAAATAA................................................................................................................................................................................. 36 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................AAAAATAAAAAAAAAAAAAAAAA......................................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................TGTATGAACTGAAAAAAAA............................................................................................................................................................................................................ 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AGATTTGTAAGTATGTATAAGTATATACACATACTTGAATTGTTTTTTATTTTTTTTTTTTTTTTTGTTTTATTTTTATTGCAATTTTAAAAGTATTGTAATACAACTGTTTATTAATATATATTTTACCGCGAAAGTTGCTAGAGTTATTTTGGACTTTGTTATTAGTACTTGTTTGCAGTGCGCGCATGCCTGTGTGTCAATATTCTTTTGACAACAGATGCTAGGTTCCTTATCGCTGTGGATGTCTC
******************************************************......((((.....(((...(((........(((........)))))).....)))...))))..........*************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060681
Argx9_testes_total
 SRR060679
140x9_testes_total
 SRR060658
140_ovaries_total
....................................................................................................................................................................................................................GACAACAATTGCTAGATTCCTT................. 22 3 3 0.33 1 1 0 0
....................................................................................................................................................................................................................GACAACAATTGCTAGATTCCT.................. 21 3 4 0.25 1 1 0 0
....TGGTAAGTATGTATAATTA.................................................................................................................................................................................................................................... 19 2 14 0.14 2 0 2 0
......................................................................................................................................................................................................................................CCTCATCGCTGTGGAAGC... 18 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:6282850-6283100 + dvi_18631 TCTAAA-----------------------CATTC------------------------------------------ATA-----CATA--T------------T----CATATATGTGTATGAAC-----TTAACAAA-AAA-TAAAAAAAAAAAAAAAAACAAAATAAA------------------------AATAACGTTAAA--AT--TTTCATAACAT--------TAT-----------------------------------GTTG--------------ACAA-ATAATTATATA-T---AA-----------------------AATGGCGCTTTCAACGATCTCA-------------------------------------------------ATAAAA------CCTGAAAC-----------------------------------------------------AATA-ATC-------------A--------TGAACAAACGTCACGCGCGTA-CGGAC-ACACAGTTATAAGAAAACTGTTGTCTACGATCCAAG-GAATAGCGACACCTACAGAG
droMoj3 scaffold_6680:4596081-4596326 + TTCATA--------------------------------------------------------------------------------TA--T------GTATATACACATGTATATATATATGAAC-----TTAACCAA-CAA-AAA----------TAAAAA-----------------TGACATAACGTTAAAAAATTCTTGAAAAAAA--TTGCATAACCT--------TAAA-----------------------------------------------------------TATTTACCACA---AT------------------------ACGGCGCTTTCAACGATCTCA-------------------------------------------------ATCAAAA---CA---AAAAC-----------------------------------------------------AATA-CGATAAAAATCCAAACTCGATAAATCGAATCG-------------A-----CGTAACAGTTATAAGAAAACTGTTGTTTACGATCCAAG-GAATAGCGAAACCTACAGAG
droGri2 scaffold_15110:6453174-6453446 - TCTAAA-----------------------TACTC------------------------------------------ATA-----T--A--C------GTATATT----TACATATATGTATGAAC-----TTAACCAC-AAA-AAA--------AAAAAAACGAAACAAAAAATTAAACTGAAATAACG---TTAAAATATTCTAA--AA--TTGCATAACAT--------TCAA-A-------ATAT---------------------TTTG--------------ACAA-ATAATTAAAAAAA---AA----------------TATACAAAATGGCGCTTTCAACGATCTCA-------------------------------------------------ATAAAAT-----CAAAAATTA----CGAAAAAT----CT--------------------------------------------------------------------------ACACGCGCG----GAAA-ACACAGCTATAAGAAAACTCTTGTTTACGATCCAAG-GAATAGCGAGACCTACAGAG
droWil2 scf2_1100000004511:8269859-8270167 - TCAACAAAAAA---------CAA---------AA------------------------------------------A-A-----TATA--TC-T--A-TT--TT----CAT--------TTGAAT-----TAAACCAA-CAA-AAA----------TAACA---TTTACA-------------------AATTACAAATTAAAAAA--TA--TTTCATAACCCTCCCCCCCCAAA-A-------AAAAACCCCCAAACCAAAACAAAAC----AAAAATATAAAATAAT-------------------GTAAAAAAAAAACGAAAATTTTAAAAATGGCGCTTTCAACGATCTCAA------ATGAAATGAAAAATGTAA-----------------------------------------------------A------AATGAAAA----AAA-----------------------AAA-AAC----------------------------ACAAAACACTCTCTCAAAAAA-ACACAGTTATAAGAAAACTGTCGTATACGATCCAAG-GAACAGCGAAACCTACAGAG
dp5 XR_group8:8968355-8968610 - AAAAAAAAATA---------CCA-----AAAACCAAAAACAAAAAACCAAAACCAAAAACAAAAAACCAAAA--CCA-AAATAAAATA--TT-C--TGT-------------------------TTTCGATTAACCAAACAAA-------------TA-----------------------------------------------------------------------------------AACAA---------------------------AATAACTTGAAATAAC-------------------GT-----------------------AATGGCGCTTTCAACGATCTCAAAAATCAATCAAATGCAAAATGCAAAA-------ACC--------ATAAATGCACA--ATCCCCGAAA------------------------------------------------------------TC----------------------------C-------------C-----CGATCCAGTTATAAGAAAACTGTCCAATACGATCCAAG-GAACAGCGAGACCTACAGAG
droPer2 scaffold_50:237008-237272 + AAAAAA-----------------------AAACCAAAAACAAAAAACCAGAACAAAAAACCAAAAACCAAAAACCCA-AAATAAAATA--TT-C--TGT-------------------------TTTCGATTAACCAAACAAA-------------TA-----------------------------------------------------------------------------------AACAA---------------------------AATAACTTGAAATAAC-------------------GT-----------------------AATGGCGCTTTCAACGATCTCAGAAATCAATCAAATGCAAAATGCAAAATGCAAAATCCACAAATGCACAAATGCACA--ATCCCCGAAA------------------------------------------------------------TC----------------------------C-------------C-----CGATCCAGTTATAAGAAAACTGTCCAATACGATCCAAGGGAACAGCGAGACCTACAGAG
droAna3 scaffold_13337:8005469-8005758 - dan_2489 CCAAAA-----------------------AAACC------------------------------------------AAA-----TATA--TT-T--TGTTAATT----CATTTAAATGAATGAATTTCGATTAACCAA-CAAACAA----------TAAAACGACTTAA---------------------AATAAATCTATTGAAAA-ACATACGCATAACCC--------CAAA-A-------AAAA---------------------ACCA--------------ACGA-A----------------T-----------------------AACGGCGCTTTCAACGATCTCAA-----------------A------------------------------ATGCAAA-AACCCCCGAA--A----CTGATA------ACGATAACG-ATACCAATCGATACCAATACCG--TTACTG-ATC----------------------------ACTGTTAACTGCCAT-----CG-AGCAGCTATAAGAAAACTGTCGTGTACGATCCCAG-GAACAGCGATACCTACAGAG
droBip1 scf7180000396541:166135-166422 - CAAAAA-----------------------AAACC------------------------------------------AAA-----TATA--TT-T--TGTTAATT----CATTTAAATGAATGAATTTCGATTAACCAA-CAAACAA----------TAAAACGACTTAA---------------------AATAAATCTATTGAAAA-ACATATGCATAACCC--------CAAA-A-------AAAA---------------------ACCA--------------ACGA-------------A---AT-----------------------AACGGCGCTTTCAACGATCTCAA-----------------A------------------------------ATGCAAAAAACCCCCGAA--A----CTGATA------ACGATACCG-ATAC----CGATACCAATACCG--TTACTG-ATC----------------------------ACTGTTAACTGCCAT-----CG-AGCAGCTATAAGAAAACTGTCGTGTACGATCCCAG-GAACAGCGATACCTACAGAG
droKik1 scf7180000302474:348518-348769 - AAAAAA------------------------------------------------------------------------------TCT---TT-T--TGTTAATT----CATTTAAACGAATGAATTTCGATTAACCAA-CAA-CAA----------AA-------TCA---------------------AAATAAATCTATTGAAA--AT--ATGCATAACAC--------CAC----------AAAA---------------------ACCA--------------ACGA-ATAATTGACCAAACAAAT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA--CCCCCCGAAAT-----CAC--ACTGA---------------C-----------------------CGATATC----------------------------ACTGACCACTGCCCC-----CG-AGCAGCTATAAGAAAACTGTCGTGTACGATCCCAG-GAACAGCGACACCTACAGAC
droFic1 scf7180000453833:812937-813206 + AAAAAAAAAAA---------CCAA-AAACAAACC------------------------------------------A-A-----TATATATT-C--T--------------------TTATGATTCTCGATTAACCAA-CAA-CAA----------TAAACCGACTTAAAA------------------AAATAAATCTGTTAAAA--AC--TTGCATAACAC--------CAAA-ATA------AAA---------------------AAAA--------------ACAA-ATAA-------AA---CC-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---TCCCCGAAT-A----CTGAA------TTTGAATCCG-AATC-----------------------AAA-ATC----------------------------ACTGACCACTGCCAC-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGAAACCTACAGAG
droEle1 scf7180000491268:51474-51735 - AAAAAAAC---AAAAAAAAACCAAAAAACAAACC------------------------------------------A-A-----TATA--TT-T--T--------------------TTATGAATCTTAATTAACCAA-CAA-CAA----------TAAAACGATTTAAA--------------------AATACAACTTTTAAAA--AC--TTGCATAACA----------------A-----AAAA---------------------ACCA--------------ACGA-ATAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAAT------CTGAA-----------------------------------------TTACGA-ATC----------------------------AATGACCACTGCCAT-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGATACCTACAGAG
droRho1 scf7180000779204:276858-277125 + CTCAAA----------------------CAAACC------------------------------------------A-A-----TATA--T--------------------------TTATGAATCTCAATTAACCAA-CAA-CAA----------TAAAACGACTTAA----------------------ATAAAACTCTTGAAA--AC--TTGCATAACC-----------------------------------------------ACCA--------------ACGAAATAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAATCACTGT--ACCACTGAATCTGAATCTG-AATC----------CAAATCTGAATCACGA-ATC----------------------------ACTGACCACTGCCAC-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGATACCTACAGAG
droBia1 scf7180000302428:10567375-10567618 + AAAAAACAAAA---------ACA-----AAAACC------------------------------------------A-A-----TCTA--TT-T--T--------------------TTATGAATCTCGATTAACCAA-CAA-CAA----------TAAAACGACTTAAA-------------------AAATAAAATTATTGAAA--AC--TTGCATAACAC--------CCAA-CAA------AAA---------------------ACCA--------------ACGA-ACAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---C-CCCGA-------------------------------------------------------------ATC----------------------------ACTGACCACTGCCCT-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGATACCTACAGAG
droTak1 scf7180000414445:76706-76970 - CCAAAAA---------------------AAAAAC------------------------------------------A-A-----TATA--TT-T--T--------------------TTATAAATCTCAATTAACAAA-CAA-CAA----------TAAAACGACTTAAA--------------------AATAAATCTATTGAAA--AC--TTGCATAACAC--------CAAA-CAA------AAA---------------------ACCA--------------ACGA-ATAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---TCCCCGAATTA----CTGAA------TCTGAATCCGAAA----------------------TCACTG-ATC----------------------------ACTGATCACTGCCAC-----CG-AGCAGCTATAAGCAAACTGTCCAGTACGATCCCAG-GAACAGCGATACCTACAGAG
droEug1 scf7180000409524:31124-31396 - CCAAAA----------------------CAAACC------------------------------------------AAA-----TATA--TT-TAAT--------------------TTATGAATCTCGATTAACCAA-CAA-CAA----------TAAAACGACTTAAA-------------------AAATAAATCTATTGAAA--AT--TTGCATAACAC--------CCAA-CAATAAACAAAA---------------------TCCA--------------ACGA-ATTATTGACCAAAC--AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAT---CCCCCGAATTA----CTGAA------TCTGAATCCG-AATC-----------------------TCA-ATC----------------------------ACTGACCACTGCCAT-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGATACCTACAGAG
dm3 chr3L:8630312-8630588 + TCAAAAAC---AAA--------------AAAACC------------------------------------------A-A-----CATA--TT-T--T--------------------TTATAAATCTCGATTAACCAA-CAA-CAA----------TAAAACAAATTAAAA-------------T----AAATAAATCTTTT-AAA--AC--TTGCGTAACAC--------CAAAACAA-----AAAA---------------------TCCA--------------ACGA-ATAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAATTA----CTGAAACTTAATCTCAATCGG-AACC-----------------------CGA-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGAAACCTACAGAG
droSim2 3l:8419687-8419962 + TCAAATAC---AAA--------------AAAACC------------------------------------------A-A-----CATA--TT-T--T--------------------TTATAAATCTCGATTAACCAA-CAA-CAA----------TAAAACAAATTAAAA------------------AAATAAATCTTTTGAAA--AC--TTACGTAACAC--------CAAA-CAA-----AAAA---------------------TCCA--------------ACGA-ATTATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAATTA----CTGAAACTTAATCTCAATCGG-AACC-----------------------CGA-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAGTTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGAAACCTACAGAG
droSec2 scaffold_0:908840-909106 + dse_383 AAA--------------------------AAACC------------------------------------------A-A-----CATA--TT-T--T--------------------TTATAAATCTCTATTAACCAA-CAA-CAA----------TAAAACAAATTAAAA------------------AAATAAATCTTTTGAAA--AT--TTGCGTAACAC--------CAAA-CAA-----AAAA---------------------TCCA--------------ACGA-ATTATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAATTA----CTGAAACTTAATCTCAATCGG-AACC-----------------------CGA-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGAAACCTACAGAG
droYak3 3L:3281874-3282141 - AAAAAAAA------------TCA-----AAAACC------------------------------------------A-A-----CATA--TT-C--T--------------------TTATAAATCTCGATTAACAAA-CAA-CAA----------TAAAACGAATTAAAA------------------AAATAAATCTTTTGAAA--AC--TTGCGTAACAC--------CAAA-CAA------AAA---------------------TCC-------------------------------------------------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---TCCCCGAATTA----CTGAATCTTAATCCGAATCCG-AAAC----------CGAATCCGGAATCCAA-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGACACCTACAGAG
droEre2 scaffold_4784:5415931-5416208 - AAAAAAAAAAA-----------A-----AAAACC------------------------------------------A-A-----CATA--CTTT--T--------------------TTATAAATCTCGATTAACCAA-CAA-AAA----------TAAAACGAATTAAAA------------------ATATAAATCTTTTGAAA--AC--TTGCGTAACAC--------CAAA-CCA-----AAAC---------------------TCCA--------------ACGA-ATAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAATTA----CTGAATCTTAATCCGAATCGG-AATC-----------------------CAA-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGAAACCTACAGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TCTAAA-----------------------CATTC------------------------------------------ATA-----CATA--T------------T----CATATATGTGTATGAAC-----TTAACAAA-AAA-TAAAAAAAAAAAAAAAAACAAAATAAA------------------------AATAACGTTAAA--AT--TTTCATAACAT--------TAT-----------------------------------GTTG--------------ACAA-ATAATTATATA-T---AA-----------------------AATGGCGCTTTCAACGATCTCA-------------------------------------------------ATAAAA------CCTGAAAC-----------------------------------------------------AATA-ATC-------------A--------TGAACAAACGTCACGCGCGTA-CGGAC-ACACAGTTATAAGAAAACTGTTGTCTACGATCCAAG-GAATAGCGACACCTACAGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAGAAAACTGTTGTCTACGATC.........................2511.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTTGTCTACGATCC........................1811.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA-CGGAC-ACACAGTTATAAGA...........................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTTGTCTACGATCCAAG-GA..................2311.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAG-GAATAGCGACACC.......1811.001010000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGTTGTCTACGATCCAAG-....................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AA-----------------------AATGGCGCTTTCAACGATCTCA-------------------------------------------------............................................................................................................................................................................................2411.001000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAG-GAATAGCGACACC.......2011.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACGATCCAAG-GAATAGCGACACC.......2611.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCCAAG-GAATAGCGACACCTAC....2611.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCACGCGCGTA-CGGAC-AC.......................................................2211.001000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGTCTACGATCCAAG-G...................2011.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATCCAAG-GAATAGCGACACC.......2411.001010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGATCCAAG-GAATAGC.............1911.001000000000000000000010000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAACTGTTGTCTACGATC.........................2211.001000000000000000000000000000000000000000000000000000000000000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTTGTCTACGATCCAAG-GAA.................2411.001000000000000000000000000000000000000000000000000000000000000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATCCAAG-GAATAGCGACACCTAC....2711.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................AA-AAA-TAAAAAAAAAAAAAAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000000000000000000000000000000000000000000000000000000000000
droMoj3
TTCATA--------------------------------------------------------------------------------TA--T------GTATATACACATGTATATATATATGAAC-----TTAACCAA-CAA-AAA----------TAAAAA-----------------TGACATAACGTTAAAAAATTCTTGAAAAAAA--TTGCATAACCT--------TAAA-----------------------------------------------------------TATTTACCACA---AT------------------------ACGGCGCTTTCAACGATCTCA-------------------------------------------------ATCAAAA---CA---AAAAC-----------------------------------------------------AATA-CGATAAAAATCCAAACTCGATAAATCGAATCG-------------A-----CGTAACAGTTATAAGAAAACTGTTGTTTACGATCCAAG-GAATAGCGAAACCTACAGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTACGATCCAAG-GAAT................1911.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCCAAG-GAATAGCGAAACCT......2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTTGTTTACGATCCA.......................2011.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAG-GAATAGCGAAACC.......1811.001000001
droGri2
TCTAAA-----------------------TACTC------------------------------------------ATA-----T--A--C------GTATATT----TACATATATGTATGAAC-----TTAACCAC-AAA-AAA--------AAAAAAACGAAACAAAAAATTAAACTGAAATAACG---TTAAAATATTCTAA--AA--TTGCATAACAT--------TCAA-A-------ATAT---------------------TTTG--------------ACAA-ATAATTAAAAAAA---AA----------------TATACAAAATGGCGCTTTCAACGATCTCA-------------------------------------------------ATAAAAT-----CAAAAATTA----CGAAAAAT----CT--------------------------------------------------------------------------ACACGCGCG----GAAA-ACACAGCTATAAGAAAACTCTTGTTTACGATCCAAG-GAATAGCGAGACCTACAGAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TCAACAAAAAA---------CAA---------AA------------------------------------------A-A-----TATA--TC-T--A-TT--TT----CAT--------TTGAAT-----TAAACCAA-CAA-AAA----------TAACA---TTTACA-------------------AATTACAAATTAAAAAA--TA--TTTCATAACCCTCCCCCCCCAAA-A-------AAAAACCCCCAAACCAAAACAAAAC----AAAAATATAAAATAAT-------------------GTAAAAAAAAAACGAAAATTTTAAAAATGGCGCTTTCAACGATCTCAA------ATGAAATGAAAAATGTAA-----------------------------------------------------A------AATGAAAA----AAA-----------------------AAA-AAC----------------------------ACAAAACACTCTCTCAAAAAA-ACACAGTTATAAGAAAACTGTCGTATACGATCCAAG-GAACAGCGAAACCTACAGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGATCCAAG-GAACAGCGAAA.........2311.00100010
....................................................................................TATA--TC-T--A-TT--TT----CAT--------TTGAAT-----TAAACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAG-GAACAGCGAAACC.......2011.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAG-GAACAGCGAAACCTACAG..2311.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGATCCAAG-GAACAGCGAAACC.......2511.00110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATACGATCCAAG-GAAC................1911.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTCGTATACGATCCAAG-....................2111.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAG-GAACAGCGAAACCTACAGA.2611.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATCCAAG-GAACAGCGAAACC.......2411.00110000
dp5
AAAAAAAAATA---------CCA-----AAAACCAAAAACAAAAAACCAAAACCAAAAACAAAAAACCAAAA--CCA-AAATAAAATA--TT-C--TGT-------------------------TTTCGATTAACCAAACAAA-------------TA-----------------------------------------------------------------------------------AACAA---------------------------AATAACTTGAAATAAC-------------------GT-----------------------AATGGCGCTTTCAACGATCTCAAAAATCAATCAAATGCAAAATGCAAAA-------ACC--------ATAAATGCACA--ATCCCCGAAA------------------------------------------------------------TC----------------------------C-------------C-----CGATCCAGTTATAAGAAAACTGTCCAATACGATCCAAG-GAACAGCGAGACCTACAGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGATCCAAG-GAACAGCGAGA.........2311.0010000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCAAG-GAACAGCGAGACCTAC....2411.0010000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGTCCAATACGATCCA.......................2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTCCAATACGATCCAAG-GA..................2411.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCAAG-GAACAGCGAGAC........2011.0010000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGATCCAAG-GAACAGCGAGACC.......2511.0010000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAATACGATCCAAG-GAAA................2111.0010000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG-GAACAGCGAGACCTACAG..2111.0010000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGTCCAATACGATCCAAG-GAA.................2811.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCAAG-GAACAGCGAGACC.......2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGATCCAAG-GAACAGCGAGACCT......2611.0010000000010
droPer2
AAAAAA-----------------------AAACCAAAAACAAAAAACCAGAACAAAAAACCAAAAACCAAAAACCCA-AAATAAAATA--TT-C--TGT-------------------------TTTCGATTAACCAAACAAA-------------TA-----------------------------------------------------------------------------------AACAA---------------------------AATAACTTGAAATAAC-------------------GT-----------------------AATGGCGCTTTCAACGATCTCAGAAATCAATCAAATGCAAAATGCAAAATGCAAAATCCACAAATGCACAAATGCACA--ATCCCCGAAA------------------------------------------------------------TC----------------------------C-------------C-----CGATCCAGTTATAAGAAAACTGTCCAATACGATCCAAGGGAACAGCGAGACCTACAGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CCAAAA-----------------------AAACC------------------------------------------AAA-----TATA--TT-T--TGTTAATT----CATTTAAATGAATGAATTTCGATTAACCAA-CAAACAA----------TAAAACGACTTAA---------------------AATAAATCTATTGAAAA-ACATACGCATAACCC--------CAAA-A-------AAAA---------------------ACCA--------------ACGA-A----------------T-----------------------AACGGCGCTTTCAACGATCTCAA-----------------A------------------------------ATGCAAA-AACCCCCGAA--A----CTGATA------ACGATAACG-ATACCAATCGATACCAATACCG--TTACTG-ATC----------------------------ACTGTTAACTGCCAT-----CG-AGCAGCTATAAGAAAACTGTCGTGTACGATCCCAG-GAACAGCGATACCTACAGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAACTGTCGTGTACG............................1911.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTACGATCCCAG-GAACA...............2011.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAAAACTGTCGTGTACGAT..........................2211.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAACTGTCGTGTACGA...........................2011.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-ATACCAATCGATACCAATACCG--TTACC................................................................................................................2811.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTACGATCCCAG-GAACAGCGATACC.......2711.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATCCCAG-GAACAGCGAT..........2111.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTACGATCCCAG-GAACAGCGATA.........2511.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCCAG-GAACAGCGATACC.......2111.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTCGTGTACGATCCCAG-GAAC................2411.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGTACGATCCCAG-GAA.................1911.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCCCAG-GAACAGCGAT..........1911.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTGTACGATCCCAG-GAACA...............2211.001100000
droBip1
CAAAAA-----------------------AAACC------------------------------------------AAA-----TATA--TT-T--TGTTAATT----CATTTAAATGAATGAATTTCGATTAACCAA-CAAACAA----------TAAAACGACTTAA---------------------AATAAATCTATTGAAAA-ACATATGCATAACCC--------CAAA-A-------AAAA---------------------ACCA--------------ACGA-------------A---AT-----------------------AACGGCGCTTTCAACGATCTCAA-----------------A------------------------------ATGCAAAAAACCCCCGAA--A----CTGATA------ACGATACCG-ATAC----CGATACCAATACCG--TTACTG-ATC----------------------------ACTGTTAACTGCCAT-----CG-AGCAGCTATAAGAAAACTGTCGTGTACGATCCCAG-GAACAGCGATACCTACAGAGSizeHit CountTotal NormTotal
No Reads
droKik1
AAAAAA------------------------------------------------------------------------------TCT---TT-T--TGTTAATT----CATTTAAACGAATGAATTTCGATTAACCAA-CAA-CAA----------AA-------TCA---------------------AAATAAATCTATTGAAA--AT--ATGCATAACAC--------CAC----------AAAA---------------------ACCA--------------ACGA-ATAATTGACCAAACAAAT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA--CCCCCCGAAAT-----CAC--ACTGA---------------C-----------------------CGATATC----------------------------ACTGACCACTGCCCC-----CG-AGCAGCTATAAGAAAACTGTCGTGTACGATCCCAG-GAACAGCGACACCTACAGACSizeHit CountTotal NormTotal
No Reads
droFic1
AAAAAAAAAAA---------CCAA-AAACAAACC------------------------------------------A-A-----TATATATT-C--T--------------------TTATGATTCTCGATTAACCAA-CAA-CAA----------TAAACCGACTTAAAA------------------AAATAAATCTGTTAAAA--AC--TTGCATAACAC--------CAAA-ATA------AAA---------------------AAAA--------------ACAA-ATAA-------AA---CC-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---TCCCCGAAT-A----CTGAA------TTTGAATCCG-AATC-----------------------AAA-ATC----------------------------ACTGACCACTGCCAC-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGAAACCTACAGAGSizeHit CountTotal NormTotal
No Reads
droEle1
AAAAAAAC---AAAAAAAAACCAAAAAACAAACC------------------------------------------A-A-----TATA--TT-T--T--------------------TTATGAATCTTAATTAACCAA-CAA-CAA----------TAAAACGATTTAAA--------------------AATACAACTTTTAAAA--AC--TTGCATAACA----------------A-----AAAA---------------------ACCA--------------ACGA-ATAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAAT------CTGAA-----------------------------------------TTACGA-ATC----------------------------AATGACCACTGCCAT-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGATACCTACAGAGSizeHit CountTotal NormTotal
No Reads
droRho1
CTCAAA----------------------CAAACC------------------------------------------A-A-----TATA--T--------------------------TTATGAATCTCAATTAACCAA-CAA-CAA----------TAAAACGACTTAA----------------------ATAAAACTCTTGAAA--AC--TTGCATAACC-----------------------------------------------ACCA--------------ACGAAATAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAATCACTGT--ACCACTGAATCTGAATCTG-AATC----------CAAATCTGAATCACGA-ATC----------------------------ACTGACCACTGCCAC-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGATACCTACAGAGSizeHit CountTotal NormTotal
No Reads
droBia1
AAAAAACAAAA---------ACA-----AAAACC------------------------------------------A-A-----TCTA--TT-T--T--------------------TTATGAATCTCGATTAACCAA-CAA-CAA----------TAAAACGACTTAAA-------------------AAATAAAATTATTGAAA--AC--TTGCATAACAC--------CCAA-CAA------AAA---------------------ACCA--------------ACGA-ACAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---C-CCCGA-------------------------------------------------------------ATC----------------------------ACTGACCACTGCCCT-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGATACCTACAGAGSizeHit CountTotal NormTotal
No Reads
droTak1
CCAAAAA---------------------AAAAAC------------------------------------------A-A-----TATA--TT-T--T--------------------TTATAAATCTCAATTAACAAA-CAA-CAA----------TAAAACGACTTAAA--------------------AATAAATCTATTGAAA--AC--TTGCATAACAC--------CAAA-CAA------AAA---------------------ACCA--------------ACGA-ATAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---TCCCCGAATTA----CTGAA------TCTGAATCCGAAA----------------------TCACTG-ATC----------------------------ACTGATCACTGCCAC-----CG-AGCAGCTATAAGCAAACTGTCCAGTACGATCCCAG-GAACAGCGATACCTACAGAGSizeHit CountTotal NormTotal
No Reads
droEug1
CCAAAA----------------------CAAACC------------------------------------------AAA-----TATA--TT-TAAT--------------------TTATGAATCTCGATTAACCAA-CAA-CAA----------TAAAACGACTTAAA-------------------AAATAAATCTATTGAAA--AT--TTGCATAACAC--------CCAA-CAATAAACAAAA---------------------TCCA--------------ACGA-ATTATTGACCAAAC--AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAT---CCCCCGAATTA----CTGAA------TCTGAATCCG-AATC-----------------------TCA-ATC----------------------------ACTGACCACTGCCAT-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGATACCTACAGAGSizeHit CountTotal NormTotal
No Reads
dm3
TCAAAAAC---AAA--------------AAAACC------------------------------------------A-A-----CATA--TT-T--T--------------------TTATAAATCTCGATTAACCAA-CAA-CAA----------TAAAACAAATTAAAA-------------T----AAATAAATCTTTT-AAA--AC--TTGCGTAACAC--------CAAAACAA-----AAAA---------------------TCCA--------------ACGA-ATAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAATTA----CTGAAACTTAATCTCAATCGG-AACC-----------------------CGA-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGAAACCTACAGAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-GAACAGCGAAACCTACA...19113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003600000000000000000300000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-GAACAGCGAAACCTACA...1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002300001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGTCCAGTACGATCCCA......................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAG-GAACAGCGAAACC.......2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAGTACGATCCCAG-GAACA...............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCCAG-GAACAGCGAA..........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG-GAACAGCGAAACCTACA...2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGTCCAGTACG............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACTGTCCAGTACGATCCC.......................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-GAACAGCGAAACCTACAG..1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAGTACGATCCCAG-GAACAGC.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAG-GAACAGCGAAACCTACA...2211.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACGATCCCAG-GAACAGCGAAAC........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAG-GAACAGCGAAACCT......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGATCCCAG-GAACAGCGATC.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCCAG-GAACAGCGAAA.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCCCAG-GAACAGCGG...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTACGATCCCAG-GAACA...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-GAACAGCGAAACCTACAGAG2111.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTACGATCCCAG-GAACAGCGAAA.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCCAG-GAACAGCGAAACC.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAGTACGATCCCAG-....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGTCCAGTACGATC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTCCAGTACGATCCCAG-GAAC................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGTCCAGTACGATCCC.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGATCCCAG-GAACAGC.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCCCAG-GAACAGCG............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAG-GAACAGCGAAACA.......2011.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAGTACGATCCCAG-GAAC................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................AA--AC--TTGCGTAACAC--------CAAA.....................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTCCAGTACGATCCCA......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTCCAGTACGATCCCA......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAG-GAACAGCGAAAC........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGATCCCAG-GAACAGCGAAAC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGATCCCAG-GAACAGCGAA..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAG...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAG-GAACAGCGAAACCTACA...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAG-GAACAGCGAAACC.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-GAACAGCGAAACCTACAGA.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCCCAG-GAACAGCGAAACC.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTCCAGTACGATCCCAG-GAAC................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCCCAG-GAACAGCGA...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-GAACAGCGAAACCTAC....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTCCAGTACGATCCCAG-GAACAGCGAAAC........3311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TGACCAAA---AT-----------------------AACGGCGCTTT........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCCCAG-GAACAGCGAA..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCAAATAC---AAA--------------AAAACC------------------------------------------A-A-----CATA--TT-T--T--------------------TTATAAATCTCGATTAACCAA-CAA-CAA----------TAAAACAAATTAAAA------------------AAATAAATCTTTTGAAA--AC--TTACGTAACAC--------CAAA-CAA-----AAAA---------------------TCCA--------------ACGA-ATTATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAATTA----CTGAAACTTAATCTCAATCGG-AACC-----------------------CGA-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAGTTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGAAACCTACAGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATCCCAG-GAACAGC.............1811.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................CTCA-------------------------------------------------ATGCAAA---CCCCCGAATTA----CTGA...............................................................................................................................................................2611.00100000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAG...................................................2611.00101000000000000000
droSec2
AAA--------------------------AAACC------------------------------------------A-A-----CATA--TT-T--T--------------------TTATAAATCTCTATTAACCAA-CAA-CAA----------TAAAACAAATTAAAA------------------AAATAAATCTTTTGAAA--AT--TTGCGTAACAC--------CAAA-CAA-----AAAA---------------------TCCA--------------ACGA-ATTATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAATTA----CTGAAACTTAATCTCAATCGG-AACC-----------------------CGA-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGAAACCTACAGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACTGTCCAGTACGATCCC.......................2311.0010100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTCCAGTACGATCCCAG-G...................2211.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ATC----------------------------ACTGACCACTGCCAA-----CG-........................................................2111.0011000
droYak3
AAAAAAAA------------TCA-----AAAACC------------------------------------------A-A-----CATA--TT-C--T--------------------TTATAAATCTCGATTAACAAA-CAA-CAA----------TAAAACGAATTAAAA------------------AAATAAATCTTTTGAAA--AC--TTGCGTAACAC--------CAAA-CAA------AAA---------------------TCC-------------------------------------------------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---TCCCCGAATTA----CTGAATCTTAATCCGAATCCG-AAAC----------CGAATCCGGAATCCAA-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGACACCTACAGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................A---TCCCCGAATTA----CTGAATCTTA.........................................................................................................................................................2211.00101000000000
..............................................................................................................................................................................................................................................A------AAA---------------------TCC-------------------------------------------------------------AACGGCGCTTTCAACG...................................................................................................................................................................................................................................................2311.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTACGATCCCAG-GAACAGCGAC..........2511.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAG-GAACAGCGACACC.......2011.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTACGATCCCAG-GAACAGCGACACCT......2811.00110000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCG-AAAC----------CGAATCCGGAATCCA................................................................................................................2611.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAG-GAACAGCGACACCTAC....2311.00100000100000
.................................................................................................................................................................................................................................................................................................................................................GCGCTTTCAACGATCTCA-------------------------------------------------AT..........................................................................................................................................................................................2011.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAGTACGATCCCAG-GA..................2011.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTCCAGTACGATCCCA......................2011.00101000000000
......................................................................................................................................................................................................TTTTGAAA--AC--TTGCGTAACA..................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
droEre2
AAAAAAAAAAA-----------A-----AAAACC------------------------------------------A-A-----CATA--CTTT--T--------------------TTATAAATCTCGATTAACCAA-CAA-AAA----------TAAAACGAATTAAAA------------------ATATAAATCTTTTGAAA--AC--TTGCGTAACAC--------CAAA-CCA-----AAAC---------------------TCCA--------------ACGA-ATAATTGACCAAA---AT-----------------------AACGGCGCTTTCAACGATCTCA-------------------------------------------------ATGCAAA---CCCCCGAATTA----CTGAATCTTAATCCGAATCGG-AATC-----------------------CAA-ATC----------------------------ACTGACCACTGCCAA-----CG-AGCAGCTATAAGAAAACTGTCCAGTACGATCCCAG-GAACAGCGAAACCTACAGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGTACGATCCCAG-GAACAGC.............2411.0010001000
........................................................................................................................................................................................................................................AAA-CCA-----AAAC---------------------TCCA--------------ACGA-ATAATTG.....................................................................................................................................................................................................................................................................................................2511.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGTCCAGTACGATCCC.......................2111.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGTACGATCCCAG-G...................1811.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTCCAGTACGATCCC.......................1911.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGACCACTGCCAA-----CG-AGC.....................................................2011.0010100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAGTACGATCCCAG-G...................1911.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGTCCAGTACGATCC........................2011.0010010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCCCAG-GAACAGCGAAACCT......2411.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTCCAGTACGATCCCAG-G...................2211.0011000000
............................................................................................TT--T--------------------TTATAAATCTCGATTAACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGTACGATCCCAG-GAA.................2011.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACGATCCCAG-GAACAGCGAAACC.......2611.0010000100

Generated: 05/16/2015 at 08:21 PM