ID:

dvi_18454

 Coordinate:

scaffold_13049:5322465-5322615 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.4 -14.3 -14.2

Flybase annnotation

exon [dvir_GLEANR_12920:1]; CDS [Dvir\GJ12993-cds]; intron [Dvir\GJ12993-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_12726:134310-134330 -
  2. scaffold_13047:19110004-19110024 -
  3. dvi_18454  scaffold_13049:5322543-5322563 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGTATTGATACCAACAACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGTGTCGCCGATTGTAATCAGACTGCAGCTCTCTCTTTAACTCTGTGCGTGTATGCGTGCCTGTGTGTTTGTGTTTGTGTGTGTGTGAGTGTTTTTCCCAAATACAAACATGTGTTGCAAATGGACACGTTCCATTAAGTTATTCTAACAGTGTTGTCAATTGAGCGCTCAACAGTGTTGGTGAAAGCTGTGACTGCT
**************************************************.......((((((.....(((((((((((((................((((((....))))))))))).))))).)))......)).))))........****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060682
9x140_0-2h_embryos_total
 M047
female body
 SRR060688
160_ovaries_total
 SRR1106725
embryo_14-16h
 SRR060671
9x160_males_carcasses_total
 V116
male body		 V053
head
 SRR060666
160_males_carcasses_total
 SRR060679
140x9_testes_total
 M027
male body		 SRR060656
9x160_ovaries_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 V047
embryo
..................................CGTAAAAAGAAAGAAGGTTAGT................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......GATACCAACAACGATTTACTATTGGC........................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTTAGTGTCGCCGATTGTAATCA.................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................ATTGGCCACGTAAAAAGAAAG............................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CAAATGTCCACGTTCAATTAAGT.......................................................... 23 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................TGTGTGTGTGTGAGTGTTTTT...................................................................................................... 21 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GAACATTGTTGGGGAAAGCTGT....... 22 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............CACAACGATTCACTATTGGT........................................................................................................................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGTGTGTGTGTGAGTGTTTT....................................................................................................... 20 0 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................TTTGGCCTCGTAAAAAGA............................................................................................................................................................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GTTGGTTAAGGCTGCGACTGC. 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................TGTGTGTGTGTGAGTGTT......................................................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................GTAATCAGACGGCTGCTTT...................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
................................................................................................................................TGTGTGTGTGTGAGTGTTT........................................................................................................ 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................TTACTCTACCAGAGTTGTC........................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CCATAACTATGGTTGTTGCTAAATGATAACCGGTGCATTTTTCTTTCTTCCAATCACAGCGGCTAACATTAGTCTGACGTCGAGAGAGAAATTGAGACACGCACATACGCACGGACACACAAACACAAACACACACACACTCACAAAAAGGGTTTATGTTTGTACACAACGTTTACCTGTGCAAGGTAATTCAATAAGATTGTCACAACAGTTAACTCGCGAGTTGTCACAACCACTTTCGACACTGACGA
******************************************************************************************************.......((((((.....(((((((((((((................((((((....))))))))))).))))).)))......)).))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060687
9_0-2h_embryos_total
 V116
male body		 SRR060663
160_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060666
160_males_carcasses_total
 M047
female body
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060661
160x9_0-2h_embryos_total
 V047
embryo
 SRR060689
160x9_testes_total
 SRR1106722
embryo_10-12h
 SRR060659
Argentina_testes_total
 SRR060681
Argx9_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 M028
head
 M027
male body		 V053
head
 SRR060674
9x140_ovaries_total
 SRR1106730
embryo_16-30h
..........................................................................................................................................................................GTTTACAGGTGCAAGTTAATTCA.......................................................... 23 3 2 47.00 94 18 5 6 8 5 7 7 5 4 4 5 3 7 3 1 0 3 1 0 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................GTTTACAGGTGCAAGTTAATTC........................................................... 22 3 2 42.00 84 14 21 9 4 3 5 3 4 4 4 3 2 0 2 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................TTTACAGGTGCAAGTTAATTCA.......................................................... 22 3 4 34.50 138 16 2 8 12 18 7 7 13 9 4 6 6 3 6 3 7 1 3 4 0 0 0 0 1 2 0 0 0 0 0
...........................................................................................................................................................................TTTACAGGTGCAAGTTAATTC........................................................... 21 3 6 13.33 80 14 15 14 8 6 5 2 2 6 1 0 2 0 0 1 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................GTTTACAGGTGCAAGTTAATT............................................................ 21 3 13 5.00 65 9 21 3 3 3 6 2 1 6 3 0 1 1 1 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TTACATGTGCAAGTTAATTCA.......................................................... 21 2 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CGTTTACAGGTGCAAGTTAATTCA.......................................................... 24 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TACATGTGCAAGTTAATTCA.......................................................... 20 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AACTATGGTTGTTGCTAGGTG.................................................................................................................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GCTAAATGATAACCGGTGCATT.................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CGTCTGACGTCCAGAGAGAAA................................................................................................................................................................ 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................TGCTAAATGATAACCGGT......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................ACACAAACACACACACACTCACAA......................................................................................................... 24 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TACAGGTGCAAGGTAATTCATT........................................................ 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CGTTTACAGGTGCAAGTTAATT............................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TACCGGTGCAAGTTAATTCA.......................................................... 20 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GTGCAAGATTATTCAGTAAG..................................................... 20 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AACACAAACACACACACACT.............................................................................................................. 20 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGCGGGTTGTCAAAACCAC............... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................CCGGTGCAAGTTAATTCA.......................................................... 18 2 9 0.22 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................AGTTTACAGGTGCAAGGTAAT............................................................. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CTCCAAGTTTACCTGTGCAA................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................TTACACGTGCAAGTTAATTCA.......................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CATGTGCAAGTTAATTCA.......................................................... 18 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TGGTTGTTGCTACAGGAT................................................................................................................................................................................................................................ 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................CAAGGTGATTCAATAATAGT.................................................. 20 3 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CCGGTGCAAGTTAATTCAT......................................................... 19 3 20 0.10 2 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CGCACACACACACATAAAAAGGGTT................................................................................................. 25 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
........ATGGTTGTCGCAAAATGCTA............................................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGCCGGTTGTCACACCCACT.............. 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ACCGGTGCAAGTTAATTCAT......................................................... 20 3 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TGGTTCTTGCTCAATCATA............................................................................................................................................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CATGTGCAAGTTAATTCATT........................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................GTTAACCGGTGCATT.................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................................GTGCAAGGTTGTTCAGTAA...................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CAAACACAAACACACACACAC............................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:5322415-5322665 + dvi_18454 GGTATTGATACCAACAACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------TC-------------------------------GCCGATTGTA--ATCAGAC-----------------------------------------------------TGCAGCTCTCTCTTTAAC--TCT--GTGCGTGTATGCGTGCCTGTGTGTTTGTGTTT--GTGT-----G------------------------------------------------T-----------------------------------------GTGTGAGTG------TTTTTCC--------CAAATA--CAAA------CATG------------------------------T--------GTT--GCAAATGGACACGTTCCATTAAGTTA-TTCTAACAGTGTTGTCAA------------TT-GAGCGCTCAA---------CAGTGTTGGTGAAAGCTGTGACTGCT
droMoj3 scaffold_6680:3682986-3683220 + TATATTGATACCAACAACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---T-------------------------------------AA----------TGCTGATTATA--ATCAGA-----------------------------------------------------CTGCAGCTCTCTCTTTAAG--TCAATGTGAGTGAGTGTAA------------GTC------TGGGT---G------TG-------AATATGTGTGCA---------------TGTG--TGTGTC----------------------------------------AAG---------------------------------------------------------------------------T--------GCT--GCAAATGGACACGTTCCATTAAGTTA-TTCTAACAGTGACTTCCAA------------T-CGGCGCTTTACGCTGTC-TGCGTGTTGGTGAAAGCT---------
droGri2 scaffold_15110:13669738-13669976 - AGTATTGATACCGACAACGATTTACTACTGGCCACGTAAAAAGAAAGAAGGTTCGT---T------------------------------------GGT----------TGCTGATTATA--ATCACACA-CTGCACTCCCC----------------------------GCGTTTCCC------------------------CACTGTGTGTGTGTGTC----------------------TGAG--------------------------------------------------------------------------------------------------------------CTTTTCCCCTCCCCTCCATA---CAAA------CATG------------------------TG----C--------GCTACGGAAATGGACACGTTCCAATAAGTTA-TTCTGCTGACG--AGCTCA----------------A--GTCAACAATGTC-TTCGTGTTGGTGAAAGCTGCGATTGCA
droWil2 scf2_1100000004762:5659310-5659614 + AATATTAATACCAACAACAATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---GTTATAAGTGTTAGTTAGTCGCCGCCGCAGCTGAGCTCTA----------TGCTGATTATA--ATCTCTG---------T------------------------------------TCCCACCTGCGCCT-GCATTTCA-------ATGTGTGTGTGTGTG----------------------TGA-------GAGTATG-------------T---------------------------------TGCT---------------------------------------GCTTCTGCTTTT---CCTCATTTAACCGTTCTCA------CATGTGTTTTCCGCTCGC----------------C--------ACT--TAAAATGGACACGTTCCAATAATTTA-TTCTAACAACGTCAACGTG------------TAGAG-CGT------CTTCGTTCGTATTGGTGAAAGCTGCGATTACA
dp5 XR_group6:1349890-1350199 + dps_2976 AATATTGATACCAACGACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CTGC-------------CT-TC----------TGCTGATTATA--ATCGCTCT-----------------------------------------------CCACCTGCAGCGCGAATTTTAGTGTTTT--GTGTGTGTGTGTGT------------GTGTGT--GTGTGT---GCGTGTGTG---------------TGCCTGCCTGTTCTGGGGCTGTG--TGTGT----------------------------------------TGAGTG------CTTATCCCCCCCACCCAACAA--CAACAACGTGCATGTGTTTTCCACTCGC------------------------AATT--GCAAATGGACACGTTCCAATAATTTA-TTCTAACAACGTCACCGCA----------------G----------CGTC-TTCGTATTGGTGAAAGCTGCGCTTAC-
droPer2 scaffold_12:2039105-2039420 + dpe_721 AATATTGATACCAACGACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CTGC-------------CT-TC----------TGCTGATTATA--ATCGCTCT-----------------------------------------------CCACCTGCAGCGCGAATTTTAGTGTTTT--GTGTGTGTGTGTGTGTGT--------GTGTGT--GTGTGT---GCGCGTGTG-------------TGTGCCTGCCTGTTCTGGGGCTGTG--TGTGT----------------------------------------TGAGTG------CTTATCCCCCCCACCCAACAA--CAACAACGTGCATGTGTTTTCCACTCGC------------------------AATT--GCAAATGGACACGTTCCAATAATTTA-TTCTAACAACGTCACCGCA----------------G----------CGTC-TTCGTATTGGTGAAAGCTGCGCTTAC-
droAna3 scaffold_13337:16138942-16139267 + CATACTGATACCCACGACGATTTATTATTGGCCACGTAAAAAGAAAGAAGGTTAGTAGTG-----------------CCGCTGCCGCAGCCGCAGCCGCTGCCCACCACAGTCGCCTTTAAAATCTCCCTGCTCGTCGCTCTCA----TTTT--------------CTAC---TCATCCACCTGCAGCT------------------GTTTGTGGGTGTGTG------TGGTTGTGTGTTTGTGT---------GTACG----------------------------------------TTTAG--CTTTCCTCT--------------------CCTAT------AGT--------------------------------------------------------------GTTGTGTC----C--------ACTGCTGAAATGGACACGTTCCAATAACTTA-TTCTAACAACGTCAGCTCAGAAATTGGGAATCTTG-GAGTCTACAGTGTC-GTCGTATTGGTGAAAGCTGCGATTACC
droBip1 scf7180000396589:292537-292846 - CATATTAATACCCACGACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGTAGTG-----------------CCGC-------------TGCCC--------AGAGCCGCCTTTA--ATCTCCCTGCTCGGCCCCCTCT----TTCT-CTCTCTCTTTTTTATAC---TCATCCACCTGCAGCT------------------GTTGGTGGGTGTGT------------GTGTGTTTGTGC-----G------------------------------------------------TTCAG--CTTTCCTCT--------------------CCCACCGTGGAAGT--------------------------------------------------------------GCTCTGTC----C--------ACT--GCAAATGGACACGTTCCAATAACTTA-TTCTAACAACGTCAGCTCAGACATTGGGAATCTCG-GAATCTACAGTGTC-GTCGTATTGGTGAAAGCTGCGATTACC
droKik1 scf7180000302697:469133-469371 - TATACTGATACCCACAACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGC-------------TGCCC----------AGCCGATTTTA--ATCGCTCG-CTC-------TCT----CTTC--------------CT--CCGCTCTCCACCTGCAGCT-------------------------------------------------------------------------------------TACA---------------TGTG--TTCGC------------------------------------------------------------------------------------------------AGCTCTCACTCTCTCATTT-CCTT--------ACT--TCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCG------------CTCGG-CGT------CTTC-TGCGTATTGGTGAAAGCTGTGATTACC
droFic1 scf7180000453819:52354-52634 - AATATTGATACCGACCACAATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---A-----------------CCGC-------------TGCCC----------AGCCGATTTTA--ATCGCACT-CTCTTCGCTCTCT----TTTT-CCCTT--------TTTTTCG--TTCCACCTGCAGCT------------------GTGCATGTGTGT--------------------------GG---GCTAGTAAG-------CATAGACATACA---------------TGTG--ATTATCCCTCTCT---TGCTCTC-----------------------------------------------------------------------------------------TCTCT-TTGAAGC--------ACT--GCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------G--GT------CTTC-TTCGTATGGGTGAAAGCTGCGATTACC
droEle1 scf7180000491193:2586155-2586436 + AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGA------------ATGCCC----------CGCCGATTTTA--ATCGCACT-CTCTTCGCTCTTA----TTTT--------------TTTTTCG--TTCCACCTGCAGCT------------------GTGCGCGGGTGTGTG------TGTGTGTGTGTGTGTGTGTGTGTCTAGTAAGA------CAAA---------------------------------CCCCTCTCCTCT--------------------CACT-----------------------------------------------------------------------TGCTCT-TC--CGC--------ATT--GCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------G----------CGTC-TTCGTATGGGTGAAAGCTGCGATTACC
droRho1 scf7180000778172:2538-2808 + AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGA------------ATGCCC----------CGCCGATTTTA--ATCGCACT-CTCTTCTCTCTTT----TTTT--------------T---TCG--TTCCACCTGCAGCT------------------GTGCGCGGGTGTGT------------GTGT--------------CTAGTAAGA------AATGGGCATACA---------------TGTG--ATTATCCCTCTCC-CT------C-----------------------------------------------------------------------------------------TCTTCTTT--TGC--------AAT--GTAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------G----------CGCC-TTCGTATGGGTGAAAGCTGCGATTACC
droBia1 scf7180000302193:6283086-6283370 + AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGCTGCCGC-------TGCCC----------AGCCGATGTTA--ATCGCACT-CTCTCCGCTCTTTACTTTTTT--------------TT--CCGTAGTCCACCTGCAGCA------------------GTGCGCGGGTGTGT------------GAGTGA--GTGAGG---GCCAGTAAGA------CATA--------------------------G--ATTGCCCCCTTCCTCTCGCACTC-----------------------------------------------------------------------------------------CCTCT-CC----C--------GCT--GCAAATGGACACGTTCCAATAAGCGA-TTCTAACAACGTCAGCTCA----------------G----------CGTC-GTCGTAGTGGTGAAAGCTGCGATTACC
droTak1 scf7180000415773:307781-308064 - AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGC-------------TGCCC----------AGCCGATTTTA--ATCGCACT-CTCTCCGCTCTTT----TTTT--------------TTTT--GTATTCCACCTGCAGCT------------------GTGCGTGGGTGTGT------------GTG------TGAGT---GCCAGTAAGA------CATAGACTTGCA---------------TGTGAGATTACCCCTCTCC-CTCGCACTC-----------------------------------------------------------------------------------------TCTCTTTC----C--------GCC--GCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------G----------CGTC-TTCGTATGGGTGAAAGCTGCGATTACC
droEug1 scf7180000409006:116094-116378 - AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGA-------------TGCCC----------AGCCGATTTTA--ATCGCACT-CTCTCCACTCTTC----TTTTTTTTTTTATT------TTTTG--TTCCACCTGCAGCT------------------GTGCGCGGGTGTGT------------G------------T---TCTAATAAGA------CTTAGACATACG---------------TGTG--ATTACGCCTCTCT-TTCGCACTC-----------------------------------------------------------------------------------------TCTCACTC----T-G------CCT--GCAAGTGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTTA----------------C----------TGTC-TGCGTATGGGTGAAAGCTGCGATTACC
dm3 chr3L:7354082-7354381 + AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAACAAGGTAAGT---G-----------------CCGC-------------TTGCC----------AGCCGATTTAA--ATCGCACT-CTCTCCGCTCTTG----TTTT--------------TTAA---TTTTCCACCTGCAGCT------------------GTGCGCGTGTGTAT------------GTGTGTAAGTGAGT---GCCAGTAAGGCGAAGGCATAGACATACA---------------TGTG--ATTACCACGCTCT-CCTGCTCT-AACC-------CTCCC------------------------------------------------------------------------------------GCCGCCACCAACAAACTAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------T----------CGTC-TTCGTATGGGTGAAAGCTGCGCT----
droSim2 3l:7220568-7220875 + AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTAAGT---G-----------------CCGC-------------TTCCT----------AGCCGATTTTA--ATCGCACT-CTCTTCGCTCTTG----TTTT--------------TTAA---TTTTCCACCTGCAGCT------------------GTGCGCGAGTGTGT------------GTGTGA--GTGAGT---GCCAGTAAGGCAGAGGCAGAGACATACA---------------TGTG--ATTACCCCGCTCC-GCTGCTCT-AACCCACCCTCCTCCC------------------------------------------------------------------------------------GCCGCCG-CAACTAACCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------T----------CGTC-TTCGTATGGGTGAAAGCTGCGATTACC
droSec2 scaffold_2:7278452-7278759 + AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTAAGT---G-----------------CCGC-------------TTCCC----------AGCCGATTTTA--ATCGCACT-CTCTTCGCTCTTG----TTTT--------------TTAA---TTTTCCACCTGCAGCT------------------GTGCGCGAGTGTGT------------GTGTGA--GTGAGT---GCCAGTAAGGCAGAGGCATAGACATACA---------------TGTG--ATTACCCCGCTCC-CCTGCTCT-AACCCACCCTCCTCCC------------------------------------------------------------------------------------GCCGCCA-CAACTAACCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------T----------CGTC-TTCGTATGGGTGAAAGCTGCGATTACC
droYak3 3L:7958685-7959003 + AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTAAGT---G-----------------CCGC-------------TTCCG----------AGCCGATTTTA--ATCGCACT-CTCTTCGCTCTTGGGTTTTTTTTCTTTTATT----TTAA---TTTTCCACCTGCAGCT------------------GTGCGCGAGTGCGT------------GTGTGT--GTGAGT---GCTAGTAAGA------CATAGACATACA---------------TGTG--ATTACCCCGCTCT-CGTTCTCTCCACCCACTCTCCTCCCGCCCTCGA-----------------------------------------------------------------GC----TC----C--------GCG--GCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------T----------CGTC-TTCGTATGGGTGAAAGCTGCGATTACC
droEre2 scaffold_4784:3987243-3987541 - AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTAAGT---G-----------------CCGC-------------TTCTC----------AGCCGATTTTA--ATAGCACT-GGCTTCGCTCTTG----TTTT--------TT----TTAT---TTTTCCACCTGCAGCT------------------GTGCGCGTGAGTG----------------------TGAGT---GCCAGTAAGG------CAAAGACATACA---------------TGTG--ATTTGCCCACTCT-CGTTCTCT-CACCCGCCCTCCTCCCGCCCTCGA-----------------------------------------------------------------GC----TC----T--------GTC--GCAAATGGACACGTTCCAATAAGTTACTTCTAACAACGTCAGCTCA----------------T----------CGTC-TTCGTATGGGTGAAAGCTGCGGTTACC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GGTATTGATACCAACAACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------TC-------------------------------GCCGATTGTA--ATCAGAC-----------------------------------------------------TGCAGCTCTCTCTTTAAC--TCT--GTGCGTGTATGCGTGCCTGTGTGTTTGTGTTT--GTGT-----G------------------------------------------------T-----------------------------------------GTGTGAGTG------TTTTTCC--------CAAATA--CAAA------CATG------------------------------T--------GTT--GCAAATGGACACGTTCCATTAAGTTA-TTCTAACAGTGTTGTCAA------------TT-GAGCGCTCAA---------CAGTGTTGGTGAAAGCTGTGACTGCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................CGTAAAAAGAAAGAAGGTTAGT---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000001000000000
......GATACCAACAACGATTTACTATTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................GTTAGT---G-----------------TC-------------------------------GCCGATTGTA--ATCA................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000001000000000000000000000000
..........................ATTGGCCACGTAAAAAGAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................T--GTGT-----G------------------------------------------------T-----------------------------------------GTGTGAGTG------TTTTT.....................................................................................................................................................................................2130.331000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................T--GTGT-----G------------------------------------------------T-----------------------------------------GTGTGAGTG------TTTT......................................................................................................................................................................................20100.101000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................T--GTGT-----G------------------------------------------------T-----------------------------------------GTGTGAGTG------TT........................................................................................................................................................................................18200.051000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................T--GTGT-----G------------------------------------------------T-----------------------------------------GTGTGAGTG------TTT.......................................................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
droMoj3
TATATTGATACCAACAACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---T-------------------------------------AA----------TGCTGATTATA--ATCAGA-----------------------------------------------------CTGCAGCTCTCTCTTTAAG--TCAATGTGAGTGAGTGTAA------------GTC------TGGGT---G------TG-------AATATGTGTGCA---------------TGTG--TGTGTC----------------------------------------AAG---------------------------------------------------------------------------T--------GCT--GCAAATGGACACGTTCCATTAAGTTA-TTCTAACAGTGACTTCCAA------------T-CGGCGCTTTACGCTGTC-TGCGTGTTGGTGAAAGCT---------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......ATACCAACAACGATTTACTATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................ATTTACTATTGGCCACGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
AGTATTGATACCGACAACGATTTACTACTGGCCACGTAAAAAGAAAGAAGGTTCGT---T------------------------------------GGT----------TGCTGATTATA--ATCACACA-CTGCACTCCCC----------------------------GCGTTTCCC------------------------CACTGTGTGTGTGTGTC----------------------TGAG--------------------------------------------------------------------------------------------------------------CTTTTCCCCTCCCCTCCATA---CAAA------CATG------------------------TG----C--------GCTACGGAAATGGACACGTTCCAATAAGTTA-TTCTGCTGACG--AGCTCA----------------A--GTCAACAATGTC-TTCGTGTTGGTGAAAGCTGCGATTGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AATATTAATACCAACAACAATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---GTTATAAGTGTTAGTTAGTCGCCGCCGCAGCTGAGCTCTA----------TGCTGATTATA--ATCTCTG---------T------------------------------------TCCCACCTGCGCCT-GCATTTCA-------ATGTGTGTGTGTGTG----------------------TGA-------GAGTATG-------------T---------------------------------TGCT---------------------------------------GCTTCTGCTTTT---CCTCATTTAACCGTTCTCA------CATGTGTTTTCCGCTCGC----------------C--------ACT--TAAAATGGACACGTTCCAATAATTTA-TTCTAACAACGTCAACGTG------------TAGAG-CGT------CTTCGTTCGTATTGGTGAAAGCTGCGATTACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAATTTA-TTCTAACAACGTCAACG.............................................................2611.00100010
...........CAACAACAATTTACTATTGGCCACGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..........................ATTGGCCACGTAAAAAGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------CTTCGTTCGTATTGGT................1811.00100010
......AATACCAACAACAATTTACTATTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.....................................................................TTAGTTAGTCGCCGCCGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.....................................................................................................................................................................................................A-------ATGTGTGTGTGTGTG----------------------TGA-------G.................................................................................................................................................................................................................................................................................................20200.05100010
...................................................................................................................................................................................................TCA-------ATGTGTGTGTGTGTG----------------------TG..........................................................................................................................................................................................................................................................................................................20200.05100001
dp5
AATATTGATACCAACGACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CTGC-------------CT-TC----------TGCTGATTATA--ATCGCTCT-----------------------------------------------CCACCTGCAGCGCGAATTTTAGTGTTTT--GTGTGTGTGTGTGT------------GTGTGT--GTGTGT---GCGTGTGTG---------------TGCCTGCCTGTTCTGGGGCTGTG--TGTGT----------------------------------------TGAGTG------CTTATCCCCCCCACCCAACAA--CAACAACGTGCATGTGTTTTCCACTCGC------------------------AATT--GCAAATGGACACGTTCCAATAATTTA-TTCTAACAACGTCACCGCA----------------G----------CGTC-TTCGTATTGGTGAAAGCTGCGCTTAC-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................CGATTTACTATTGGCCACGTAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
................................................................................................................................................................................................................................................................GTG---------------TGCCTGCCTGTTCTGGT...........................................................................................................................................................................................................................................................2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------AATT--GCAAATGGACACGTTC.........................................................................................2111.0010100000000
...............GACGATTTACTATTGGCCACGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
.ATATTGATACCAACGACGATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........CAACGACGATTTACTATTGGCCACGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
........................................................................................................................................................................................................................TGTGT------------GTGTGT--GTGTGT---G...................................................................................................................................................................................................................................................................................................18200.4590900000000
.................................................................................................................................................................................................................GTGTGTGTGTGT------------GTGTGT--GTGTGT---G...................................................................................................................................................................................................................................................................................................25200.3570000070000
....................................................................................................................................................................................................................................................TGT---GCGTGTGTG---------------TGCCTGC.....................................................................................................................................................................................................................................................................1930.3310100000000
...........................................................................................................................................................................................................................................GTGT--GTGTGT---GCGTGTGT............................................................................................................................................................................................................................................................................................18200.1020200000000
droPer2
AATATTGATACCAACGACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CTGC-------------CT-TC----------TGCTGATTATA--ATCGCTCT-----------------------------------------------CCACCTGCAGCGCGAATTTTAGTGTTTT--GTGTGTGTGTGTGTGTGT--------GTGTGT--GTGTGT---GCGCGTGTG-------------TGTGCCTGCCTGTTCTGGGGCTGTG--TGTGT----------------------------------------TGAGTG------CTTATCCCCCCCACCCAACAA--CAACAACGTGCATGTGTTTTCCACTCGC------------------------AATT--GCAAATGGACACGTTCCAATAATTTA-TTCTAACAACGTCACCGCA----------------G----------CGTC-TTCGTATTGGTGAAAGCTGCGCTTAC-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
AATATTGATACCAACGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
.................................................................................................................................................................................................................................................................................GTGCCTGCCTGTTCTGGGGCC........................................................................................................................................................................................................................................................2111.001010000
...................................................................................................................................................................................................................GTGTGTGTGTGTGT--------GTGTGT--GTGT.........................................................................................................................................................................................................................................................................................................24200.051000001
droAna3
CATACTGATACCCACGACGATTTATTATTGGCCACGTAAAAAGAAAGAAGGTTAGTAGTG-----------------CCGCTGCCGCAGCCGCAGCCGCTGCCCACCACAGTCGCCTTTAAAATCTCCCTGCTCGTCGCTCTCA----TTTT--------------CTAC---TCATCCACCTGCAGCT------------------GTTTGTGGGTGTGTG------TGGTTGTGTGTTTGTGT---------GTACG----------------------------------------TTTAG--CTTTCCTCT--------------------CCTAT------AGT--------------------------------------------------------------GTTGTGTC----C--------ACTGCTGAAATGGACACGTTCCAATAACTTA-TTCTAACAACGTCAGCTCAGAAATTGGGAATCTTG-GAGTCTACAGTGTC-GTCGTATTGGTGAAAGCTGCGATTACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
CATACTGATACCCACGACGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCTCAGAAATTGGGT.................................................1911.001000010
..................................................GTTAGTAGTG-----------------CCGCTGCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................................AAGGTTAGTAGTG-----------------CCGCTGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..............................................GAAGGTTAGTAGTG-----------------CCGCTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
......GATACCCACGACGATTTATTATTGGCCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
droBip1
CATATTAATACCCACGACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGTAGTG-----------------CCGC-------------TGCCC--------AGAGCCGCCTTTA--ATCTCCCTGCTCGGCCCCCTCT----TTCT-CTCTCTCTTTTTTATAC---TCATCCACCTGCAGCT------------------GTTGGTGGGTGTGT------------GTGTGTTTGTGC-----G------------------------------------------------TTCAG--CTTTCCTCT--------------------CCCACCGTGGAAGT--------------------------------------------------------------GCTCTGTC----C--------ACT--GCAAATGGACACGTTCCAATAACTTA-TTCTAACAACGTCAGCTCAGACATTGGGAATCTCG-GAATCTACAGTGTC-GTCGTATTGGTGAAAGCTGCGATTACCSizeHit CountTotal NormTotal
No Reads
droKik1
TATACTGATACCCACAACGATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGC-------------TGCCC----------AGCCGATTTTA--ATCGCTCG-CTC-------TCT----CTTC--------------CT--CCGCTCTCCACCTGCAGCT-------------------------------------------------------------------------------------TACA---------------TGTG--TTCGC------------------------------------------------------------------------------------------------AGCTCTCACTCTCTCATTT-CCTT--------ACT--TCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCG------------CTCGG-CGT------CTTC-TGCGTATTGGTGAAAGCTGTGATTACCSizeHit CountTotal NormTotal
No Reads
droFic1
AATATTGATACCGACCACAATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---A-----------------CCGC-------------TGCCC----------AGCCGATTTTA--ATCGCACT-CTCTTCGCTCTCT----TTTT-CCCTT--------TTTTTCG--TTCCACCTGCAGCT------------------GTGCATGTGTGT--------------------------GG---GCTAGTAAG-------CATAGACATACA---------------TGTG--ATTATCCCTCTCT---TGCTCTC-----------------------------------------------------------------------------------------TCTCT-TTGAAGC--------ACT--GCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------G--GT------CTTC-TTCGTATGGGTGAAAGCTGCGATTACCSizeHit CountTotal NormTotal
No Reads
droEle1
AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGA------------ATGCCC----------CGCCGATTTTA--ATCGCACT-CTCTTCGCTCTTA----TTTT--------------TTTTTCG--TTCCACCTGCAGCT------------------GTGCGCGGGTGTGTG------TGTGTGTGTGTGTGTGTGTGTGTCTAGTAAGA------CAAA---------------------------------CCCCTCTCCTCT--------------------CACT-----------------------------------------------------------------------TGCTCT-TC--CGC--------ATT--GCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------G----------CGTC-TTCGTATGGGTGAAAGCTGCGATTACCSizeHit CountTotal NormTotal
No Reads
droRho1
AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGA------------ATGCCC----------CGCCGATTTTA--ATCGCACT-CTCTTCTCTCTTT----TTTT--------------T---TCG--TTCCACCTGCAGCT------------------GTGCGCGGGTGTGT------------GTGT--------------CTAGTAAGA------AATGGGCATACA---------------TGTG--ATTATCCCTCTCC-CT------C-----------------------------------------------------------------------------------------TCTTCTTT--TGC--------AAT--GTAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------G----------CGCC-TTCGTATGGGTGAAAGCTGCGATTACCSizeHit CountTotal NormTotal
No Reads
droBia1
AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGCTGCCGC-------TGCCC----------AGCCGATGTTA--ATCGCACT-CTCTCCGCTCTTTACTTTTTT--------------TT--CCGTAGTCCACCTGCAGCA------------------GTGCGCGGGTGTGT------------GAGTGA--GTGAGG---GCCAGTAAGA------CATA--------------------------G--ATTGCCCCCTTCCTCTCGCACTC-----------------------------------------------------------------------------------------CCTCT-CC----C--------GCT--GCAAATGGACACGTTCCAATAAGCGA-TTCTAACAACGTCAGCTCA----------------G----------CGTC-GTCGTAGTGGTGAAAGCTGCGATTACCSizeHit CountTotal NormTotal
No Reads
droTak1
AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGC-------------TGCCC----------AGCCGATTTTA--ATCGCACT-CTCTCCGCTCTTT----TTTT--------------TTTT--GTATTCCACCTGCAGCT------------------GTGCGTGGGTGTGT------------GTG------TGAGT---GCCAGTAAGA------CATAGACTTGCA---------------TGTGAGATTACCCCTCTCC-CTCGCACTC-----------------------------------------------------------------------------------------TCTCTTTC----C--------GCC--GCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------G----------CGTC-TTCGTATGGGTGAAAGCTGCGATTACCSizeHit CountTotal NormTotal
No Reads
droEug1
AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTTAGT---G-----------------CCGA-------------TGCCC----------AGCCGATTTTA--ATCGCACT-CTCTCCACTCTTC----TTTTTTTTTTTATT------TTTTG--TTCCACCTGCAGCT------------------GTGCGCGGGTGTGT------------G------------T---TCTAATAAGA------CTTAGACATACG---------------TGTG--ATTACGCCTCTCT-TTCGCACTC-----------------------------------------------------------------------------------------TCTCACTC----T-G------CCT--GCAAGTGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTTA----------------C----------TGTC-TGCGTATGGGTGAAAGCTGCGATTACCSizeHit CountTotal NormTotal
No Reads
dm3
AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAACAAGGTAAGT---G-----------------CCGC-------------TTGCC----------AGCCGATTTAA--ATCGCACT-CTCTCCGCTCTTG----TTTT--------------TTAA---TTTTCCACCTGCAGCT------------------GTGCGCGTGTGTAT------------GTGTGTAAGTGAGT---GCCAGTAAGGCGAAGGCATAGACATACA---------------TGTG--ATTACCACGCTCT-CCTGCTCT-AACC-------CTCCC------------------------------------------------------------------------------------GCCGCCACCAACAAACTAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------T----------CGTC-TTCGTATGGGTGAAAGCTGCGCT----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........ACCGACCACCATTTACTATTGGCCACGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TATTGATACCGACCACCATTTACTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATTGGCCACGTAAAAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACTATTGGCCACGTAAAAAGAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATTGGCCACGTAAAAAGAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATGGGTGAAAGCTGC.......1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..................................................................................................................................................................................................................CGCGTGTGTAT------------GTGTGTAAGTGAGT---G...................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................CT-CCTGCTCT-AACC-------CTCCC------------------------------------------------------------------------------------GC......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGTTA-TTCTAACAACGTCAGCT.............................................................2511.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................GTAT------------GTGTGTAAGTGAGT---GC..................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGTAAGTGAGT---GCCAGTAAGG..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TGTAT------------GTGTGTAAGTGAGT---GCA.................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................TGGCCACGTAAAAAGAAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................ATACA---------------TGTG--ATTACCACGCT........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CACGTAAAAAGAAACAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TCGCACT-CTCTCCGCTCTTG----T.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................CGC-------------TTGCC----------AGCCGATTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ATCGCACT-CTCTCCGCTCTTG----..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AAAGAAACAAGGTAAGT---G-----------------CCGC-------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..TATTGATACCGACCACCATTTACTATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACAACGTCAGCTCA----------------T----------CGT.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA----------------T----------CGTC-TTCGTATGGGTG...............2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------CGTC-TTCGTATGGGTGAAAGCTGC.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCGACCACCATTTACTATTGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTATGGGTGAAAGCTGCGC.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................ACCTGCAGCT------------------GTGCGCGTGTGTA..................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................GCT------------------GTGCGCGTGTGTAT------------GTGTG................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGTTA-TTCTAACAACGTCAG...............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GCGTGTGTAT------------GTGTGTAAG............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AAAAAGAAACAAGGTAAGT---G-----------------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................AGCT------------------GTGCGCGTGTGTAT------------GTG..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................................................................GTGTAAGTGAGT---GCCAGTAAGGCGA.......................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................TTTACTATTGGCCACGTAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------T----------CGTC-TTCGTATGGGTGAAAGC..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATTGGCCACGTAAAAAGAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GATACCGACCACCATTTACTATTGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................CCGATTTAA--ATCGCACT-CTCTCCG....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------T----------CGTC-TTCGTATGGGTGATC............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................GCT------------------GTGCGCGTGTGTAT------------GTG..................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................TTTACTATTGGCCACGTAAAAAGAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----------------T----------CGTC-TTCGTATGGGTG...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
AATATTGATACCGACCACCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................GTGAGT---GCCAGTAAGGCGAAG.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGTCAGCTCA----------------T----------CGTC-TTCG.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................T------------GTGTGTAAGTGAGT---GCCAGTT.............................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................................................................................................................................................TTTCCACCTGCAGCT------------------GTGCGC.........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................TTGGCCACGTAAAAAGAAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................AT------------GTGTGTAAGTGAGT---GCCAG...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................ATTTACTATTGGCCACGTAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-TTCTAACAACGTCAGCTCA----------------A----------................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TTCTAACAACGTCAGCTCA----------------T----------CG..............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTCA----------------T----------CGTC-TTCGTATGGG.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATATTGATACCGACCACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TAAGTGAGT---GCCAGTAAGGCG........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................AACAAGGTAAGT---G-----------------CCGC-------------TTGCA----------.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................C-------------TTGCC----------AGCCGATTTAA--ATC.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CCACCATTTACTATTGGCCACGTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGCAGCT------------------GTGCGCGTGTGTAT------------GTGTGT...............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------CGTC-TTCGTATGGGTGAAAGCTG........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................GTAT------------GTGTGTAAGTGAGT---GCCAG...............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................G--ATTACCACGCTCT-CCTGCTC..............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................A---------------TGTG--ATTACCACGCTCT-CC...................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CGTAAAAAGAAACAAGGTAAGT---G-----------------CC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA----------------T----------CGTC-TTCGTATGGGTGA..............2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................GTGCGCGTGTGTAT------------GTGTGTA..............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................AAGAAACAAGGTAAGT---G-----------------CCGC-------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTC-TTCGTATGGGTGAAAGC..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CAGCT------------------GTGCGCGTGTGTAT------------GT...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................AA--ATCGCACT-CTCTCCGCTC.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AATATTGATACCGACCACCATTTACTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTATTGGCCACGTAAAAAGAAACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CGAAGGCATAGACATACA---------------TGT......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................ACA---------------TGTG--ATTACCACGCTCT-CC...................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TCCACCTGCAGCT------------------GTGCGCGT.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCAGCTCA----------------T----------CGTC-TTCG.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTGGCCACGTAAAAAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..................................CGTAAAAAGAAACAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CT------------------GTGCGCGTGTGTAT------------GTGTG................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATTGGCCACGTAAAAAGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................TGTAT------------GTGTGTAAGTGAGT---G...................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droSim2
AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTAAGT---G-----------------CCGC-------------TTCCT----------AGCCGATTTTA--ATCGCACT-CTCTTCGCTCTTG----TTTT--------------TTAA---TTTTCCACCTGCAGCT------------------GTGCGCGAGTGTGT------------GTGTGA--GTGAGT---GCCAGTAAGGCAGAGGCAGAGACATACA---------------TGTG--ATTACCCCGCTCC-GCTGCTCT-AACCCACCCTCCTCCC------------------------------------------------------------------------------------GCCGCCG-CAACTAACCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------T----------CGTC-TTCGTATGGGTGAAAGCTGCGATTACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......GATACCGACCACCATTTACTATTGGCCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000000000
.....................TTACTATTGGCCACGTAAAAAGAAAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................TCT-AACCCACCCTCCTCCC------------------------------------------------------------------------------------GC......................................................................................................................2111.00100010000000000000
..................................................................................................................................................................................................................................................TGAGT---GCCAGTAAGGCAGAGGC...................................................................................................................................................................................................................................................................................2211.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................TCC-GCTGCTCT-AACCCACCCT..................................................................................................................................................................................................................2111.00110000000000000000
droSec2
AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTAAGT---G-----------------CCGC-------------TTCCC----------AGCCGATTTTA--ATCGCACT-CTCTTCGCTCTTG----TTTT--------------TTAA---TTTTCCACCTGCAGCT------------------GTGCGCGAGTGTGT------------GTGTGA--GTGAGT---GCCAGTAAGGCAGAGGCATAGACATACA---------------TGTG--ATTACCCCGCTCC-CCTGCTCT-AACCCACCCTCCTCCC------------------------------------------------------------------------------------GCCGCCA-CAACTAACCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------T----------CGTC-TTCGTATGGGTGAAAGCTGCGATTACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................TTTA--ATCGCACT-CTCTTCGCT..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
droYak3
AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTAAGT---G-----------------CCGC-------------TTCCG----------AGCCGATTTTA--ATCGCACT-CTCTTCGCTCTTGGGTTTTTTTTCTTTTATT----TTAA---TTTTCCACCTGCAGCT------------------GTGCGCGAGTGCGT------------GTGTGT--GTGAGT---GCTAGTAAGA------CATAGACATACA---------------TGTG--ATTACCCCGCTCT-CGTTCTCTCCACCCACTCTCCTCCCGCCCTCGA-----------------------------------------------------------------GC----TC----C--------GCG--GCAAATGGACACGTTCCAATAAGTTA-TTCTAACAACGTCAGCTCA----------------T----------CGTC-TTCGTATGGGTGAAAGCTGCGATTACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........CCGACCACCATTTACTATTGGCCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
droEre2
AATATTGATACCGACCACCATTTACTATTGGCCACGTAAAAAGAAAGAAGGTAAGT---G-----------------CCGC-------------TTCTC----------AGCCGATTTTA--ATAGCACT-GGCTTCGCTCTTG----TTTT--------TT----TTAT---TTTTCCACCTGCAGCT------------------GTGCGCGTGAGTG----------------------TGAGT---GCCAGTAAGG------CAAAGACATACA---------------TGTG--ATTTGCCCACTCT-CGTTCTCT-CACCCGCCCTCCTCCCGCCCTCGA-----------------------------------------------------------------GC----TC----T--------GTC--GCAAATGGACACGTTCCAATAAGTTACTTCTAACAACGTCAGCTCA----------------T----------CGTC-TTCGTATGGGTGAAAGCTGCGGTTACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................ATTTACTATTGGCCACGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.....................................................................................................................................................................................................................GTGAGTG----------------------TGAGT---GCCAGTAAGG------C...................................................................................................................................................................................................................................................................................2311.0010100000
......................TACTATTGGCCACGTAAAAAGAAAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
........TACCGACCACCATTTACTATTGGCCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000

Generated: 05/17/2015 at 05:14 AM