ID:

dvi_18442

 Coordinate:

scaffold_13049:5272757-5272907 -

 Confidence:

Known Ortholog

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ12371-cds]; exon [dvir_GLEANR_12343:1]; intron [Dvir\GJ12371-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

TCCACATTGCATGCCACAAACAAACTTATACACGACTGCAAACGCGTGTGGTAAGTACAATAAATATCATAGCAAAATTCAAGGCCACCTCGTGATATGCATAAATGGTTAGATTACGATTTCATAAGTTTGATAAATGTTAATGATTAGGACAGCATGCGTATTAAAAGTTAAAACAGAACGACATCAAAGAGGTCAGGCAACAATTTGCGTGTGTGTTGTTTTGGCCCCTTTTCGCAATTAACTCAATG

***********************************.((((((.((.(((((((...........)))))))))..........((((((((.((((((((((...((((((....(((...(((......)))....)))...)))))).......))))))))))...(((.......))).........)))))..))).....))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total M047

female body

 SRR060655

9x160_testes_total

 SRR060657

140_testes_total

 V047

embryo

 SRR060654

160x9_ovaries_total

 SRR060686

Argx9_0-2h_embryos_total
..............................................................................................................................................................................................................TTTGCGTGTGTGTTGTTTTGG........................ 21 0 1 2.00 2 1 0 1 0 0 0
.CCACATTGCATGCCACAAACAAACTT................................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................ATTTGCGTGTGTGTTGTTTTG......................... 21 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................................................GAACGAAATCAGAGAGGT....................................................... 18 2 4 0.25 1 0 0 0 1 0 0
.................................................................................................................................................................................AGAACGACCAAAAAGAGGTCA..................................................... 21 3 7 0.14 1 0 0 0 0 1 0
.............................ACACGACTGGAAATGTGTGT.......................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

AGGTGTAACGTACGGTGTTTGTTTGAATATGTGCTGACGTTTGCGCACACCATTCATGTTATTTATAGTATCGTTTTAAGTTCCGGTGGAGCACTATACGTATTTACCAATCTAATGCTAAAGTATTCAAACTATTTACAATTACTAATCCTGTCGTACGCATAATTTTCAATTTTGTCTTGCTGTAGTTTCTCCAGTCCGTTGTTAAACGCACACACAACAAAACCGGGGAAAAGCGTTAATTGAGTTAC

***********************************.((((((.((.(((((((...........)))))))))..........((((((((.((((((((((...((((((....(((...(((......)))....)))...)))))).......))))))))))...(((.......))).........)))))..))).....))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060679

140x9_testes_total

 V053

head

 SRR060682

9x140_0-2h_embryos_total

 SRR060667

160_females_carcasses_total

 V047

embryo

 SRR060672

9x160_females_carcasses_total

 SRR060680

 9xArg_testes_total

 SRR060671

9x160_males_carcasses_total

 SRR060664

9_males_carcasses_total

 SRR060668

160x9_males_carcasses_total

 V116

male body		 SRR060658

140_ovaries_total

 SRR060660

Argentina_ovaries_total

 SRR060657

140_testes_total

 SRR060659

Argentina_testes_total

 SRR060666

160_males_carcasses_total

 SRR060677

Argx9_ovaries_total

 SRR060678

9x140_testes_total

 SRR060681

Argx9_testes_total
....................................................................................................................................................................ATTTTCAAATTTGGCATGC.................................................................... 19 3 20 0.65 13 0 0 0 5 1 0 1 1 1 2 0 0 0 1 0 0 0 1 0
.................................................................................TCCGGTGGAGCAGTATACG....................................................................................................................................................... 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AAAAAAACCGGGGAAAAG............... 18 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................ATCTTCAAATTTGGCTTGC.................................................................... 19 3 20 0.30 6 0 0 0 0 0 2 1 0 1 0 0 0 0 0 0 1 0 0 1
......................................................................................TGCACCACTATACGTATTT.................................................................................................................................................. 19 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TACCAATCTAACCCTAAAG................................................................................................................................ 19 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GTTGTAGTTGCTCCAGTCC................................................... 19 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AGTTTCAAATTTGTCATGC.................................................................... 19 3 20 0.15 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0
.....................................................................................................................................................................................GCTGTAGTTGCTCCAGGGC................................................... 19 3 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................AATCTTCAAATTTGGCTTGC.................................................................... 20 3 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TATTCAAATTTGTCATGCTG.................................................................. 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................AGCTTCAATTTTGTCATGC.................................................................... 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................AAGTTTCAATTTTGGCATGC.................................................................... 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................AATTTTCAAATTTGGCATGC.................................................................... 20 3 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:5272707-5272957 - dvi_18442 ----------T--------CCACATTGCATGCCACAAACAA---AC------TTA---------TACACGACTGCAAACGCGTGTGGTAAGTACAA-----TAAA-TA-------------------------------TCATAGC-AAAATTCAAGGCCACCTCGTGATATGCA--------T---------------AAA-TGGTTA---------GATTACGATTTCATAAGTTTG-------------------------------------ATAAATGTTA-AT-----------------------GATTAGGACAGCAT--------------------------------GCGTATTAAAAGTTAAAACAGAACGACATC---------------AAAGAGGTCAGGCAA---CA--ATTTGCGTGTGTGTTGTTTTGGCCCCTTTTCG-----CA---A-----------TTAA--------------CTCAATG
droMoj3 scaffold_6680:3637178-3637432 - ----------T--------CCACATTACATGCCAGAAACAG-----------------ATCAGAACAAGACATCC-AGCATATGTGGTAAGTACAA-----------A--------------T---AACAAAAC-----GATAAAC-CAAATTCAAGGCCATTT---GC-----------------------------------GGCTA---------GGTTACGATTTCATAATGATAA--------AG-A-------------TTAACAGGCATG---------AT----GTGC----AGAT-TA-------------------------------TTGGCTATAAATAT------------------------------------ACAAGAA-AAAGAGCAAAGAGGTCAGGCAA---CA--GTATGCGTGTGTGTTGTTTTGGCCCCTTTTCG-----AAAAATTAGTTGATATTTTAT--------------TTTAATG
droGri2 scaffold_15110:13714449-13714702 + ----------T--------CCACATTAAATGCCACAATCCACTTGG------------------CATACAAGGCCAATCGCGTGTGGTAAGTAAAA-----------A-------------------------------TCAAG-----ATTTCAAGGCCACACTCTGG-----T----AGATA---------------AAGTTTCCCA---------GATTACGATTTCATAAGTTTA-------------------------------------TTGA-------ATG-A----------------------TTAGAACAAAAGCAGCGCAGATTAGTTGC-----ATATGCTGCGGCTAATTAAA------------------------------AAAACAAAGAGGTCAGGCAA---CA--ATATGCGTGTGTGTTGTTTTGGCCCCTTTTGT-----AGACCCG-----------AGT-AG----------ATTTAACG
droWil2 scf2_1100000004762:1314885-1315157 + ------------------GCCGCAGCACATACCCCACTATT---GG------CAAGGGAGGCCACAACCACGTGCAACCAAGAGTTGTAAGTTTTTTTTTTTG-CGCTTAGTTTATTCAATTTCTGCT-----------CGT--GC-CTGATTCAAGGCCACAA---AA-----A-A-AAAAAATACCAAAAATAAATTATCTTGACTAGACCAAAAAGA---TTATTTAATAATGACGTGCAAAACTTTGAAATGTG-----CGTCGTTAATCTAA----------TAG-AATAG--------------------------------------------------------------------------------------------------------------TAGGTCAGGCAA---CA--GTTTGCGTGTGTGTTGTTTTGGCCCTTAACA---------------------------------------------AGA
dp5 XR_group8:4175556-4175848 + ------------------GCCGCGCGACATGCTACGGACTT---TT------TAAAGGAGCC---CGCCACGTGCCAGCGAGAGTGGTAAGTGTTC-----CGAGGCTC----------ATCTGCGCC-----------CGTGGCC-GTGTCTCAAGGCCACTC---GG----CTAGATAAAGT---------------CTCCCGACTA---------GATTACGATTTCGTAATTATGC--------GT-GAAT-C-----------GCAGTACTA----------TTGTAGCGG----AA-TATTCCATCAATTAGAATAGCATCA-----------------------------GGCAAAATGAA------AC----------------------CAAAGAAAGAGGTCAGGCAA---CA--GTATGCGTGTGTGTTGTTTTGGCCCTTTTAGAGATCGAGAGTGT-----------AAT--------------TTCAATG
droPer2 scaffold_29:411366-411658 + ------------------GCCGCGCGACATGCTACGGACTT---GT------TAAAGGAGCC---CGCCACGTGCCAGCGAGAGTGGTAAGTGTTC-----CGGGGCTC----------ATCTGCGCC-----------CGTGGCC-GTGTCTCAAGGCCACTC---GG----CTAGATAAAGT---------------CTCCCGACTA---------GATTACGATTTCGTAATTATGC--------GT-GAAT-C-----------GCAGTACTA----------TTGTAGCGG----AA-TATTCCATCAATTAGAATAGCAACA-----------------------------GGCAAAATGAA------AG----------------------CAAAGAAAGAGGTCAGGCAA---CA--GTATGCGTGTGTGTTGTTTTGGCCCTTTTAGAGATCGAGAGTGT-----------AAT--------------TTCAATG
droAna3 scaffold_13337:12493246-12493530 + ----------CCAGTACTGCCGTACGCGATGCTACAAGCTA---GCCGCCTATAAAGG------AAGCCACGTGCAGGCACGAGTGGTGAGTACGC-----------A-------------------------------TTCAGCCGCCTTTTCAAGGCCACAT---GCTCTGCTAG--AGTCT---------------ATCTAGACCA-------GAGATTACGATTTCGTAAT-GTGC--------GC-TAATGTACAATGAATTGGCAGTTTAA----------TTA-AGTTCTGG-GAATATCCCATCA------------------------------------------------------------------------ATTAGCGGAG-AGAGCAGAAAGTGGTCAGGCAA---CA--GTATGCGTGTGTGTTGTTTTGGCCCTTTTTCA-----AAACTCG-----------AATTT---------------GAAT
droBip1 scf7180000396589:1494101-1494377 - ------------------GCCGCATCCGATGCTACAAGCTA---GCCGCCTCCAAAGG------TAGCCACGTGCAGGCACGAGTGGTGAGTACGC-----------A-------------------------------TTCAGCCGCCTTTTCAAGGCCACCT---GCTCTGCTAG--AAGCT---------------ATCTAGACCA-------GAGATTATGATTTCGTAAT-GTGC--------GC-TAATGTACAATGAATTGGCAGTTTAA----------TTA-AGTGGGTGGAA-TATCCCCTCA------------------------------------------------------------------------ATTAGCGGAG-AGAGCCGAAAGTGGTCAGGCAA---CA--GTATGCGTGTGTGTTGTTTTGGCTCTTTTTCG-----AAACTCG-----------AATTT---------------GATT
droKik1 scf7180000302577:87825-87957 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTA---------GATTGCGATTTCGTAATTACGC--------GT-AAATGCCGGATGAATTGGCGGTTTAATAA-------TTG-A-------------------------------------------------------------------------------------------------------------------TGGTCAGGCAGCGTCAGCTTCTGCGTGTGTGTTGTTTTGGCCCAATTTCC-----AAGCTTA-----------AATCCG----------AATTAATG
droFic1 scf7180000454113:463983-464257 - ----------TTAG----GTCGTGCGAAATGCTACACCCTC---GC------TAAGGG------CAGCCACGTGCAGGCAAGAGTGGTGAGTACCC-----CGTGATT-------------------CTGGCCCTAGAATCTAGAC-CCATTTCAAGGCCACAT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTAAGC--------GA-AAATACGCAATAAATTAGTGGTTTGA----------TTG-AGTGG----AAAT-TACCATCG------------------------------------------------------------------------ATTGGTTGGGGT------------------AAA---CA--GTCTGCGTGTGCGTTGCTTTGGTCCTTTTCCA-----C---AT-----------TCAACCGATTAAACATAAATTAATG
droEle1 scf7180000491249:3962041-3962304 - ACCCGCTCACCTGG----GACGCGCGAAATGCTACACGCTC---GC------CAAGGG------AACACACGTGCAGGCCAGAGTGGTGAGTACTC-----C--------------------TGCGACCGGGTC-----TAGAGAC-CTATTTCAAGGCCACAA---GC-----G----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTAGGC--------GTTAAATACGCAATGAATTGGCGATTTAA----------ATG-CGTGG----AAAT-TACCAGCA------------------------------------------------------------------------ATAAGTGGGGCG------------------GAG---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTTTCCC-----C---AT-----------TTACCT----------------AAG
droRho1 scf7180000776850:332085-332340 - TC------ACTTAG----GACGCGCGAAATGCTACACGTTC---GT------TAAGGG------AACACACGTGCAGGCCAGAGTGGTGAGTACTC-----CG---CG------------------ACCGGGTC-----TAGAGAC-CTATTTCAAGGCCACAT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTAGGC--------GT-AAATACGCAATGAATTGGCGGTTTGA----------TTG-AGTGG----AAAT-TACCAACA------------------------------------------------------------------------GTCATAGGGGCA------------------AAA---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTTTCCC-----A---TT------------TACCT---------------GATA
droBia1 scf7180000300910:1738059-1738300 + ----------TTAG----GTCGCGCGAAATGCTACACCTTC---GC------TAAGGGAACGGGAACCCACGTGCACGCAAGAGTGGTAAGTACAC-----CGGGGTT-------------------------CTAGAATCTAGAC-CCATTTCAAGGCCACCT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTAGGT--------GTGAGATACGCAATGAATTGGCGGTTTGA----------TTG-AGCGG----G------------------------------------------------------------------------------------------------------------------TAT---CA--GTCTGCGTGTGCGTTGTTTTGGTCCCCTTCCC-----C---AC-----------AGAACCCATCA-----------ATC
droTak1 scf7180000415095:160334-160379 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA--GTCTGCGTGTGCGTTGTTTTGGTGCTCTTTTC-----TT----------------------ATCCATC--------CTG
droEug1 scf7180000409007:437148-437404 + ----------TTAG----GTCGCGCGAAATGCTACACGTTC---GT------TAAAGGAACTGGAAAACACGTGCAGGCAAGAGTGGTGAGTACTC-----CG---GG-------------------------------TCTAGTC-CAATTTCAAGGCCACAT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTGTGC--------GT-AAATGCGCAATAAATTGGCGGTTTGA----------TTG-AACGG----GAAT-TACCGACG------------------------------------------------------------------------ATCGGCAATG-A------------------GAA---CA--GTCTGCGTGTGCGTTGTTTTGGTCTTTTTCCT-----T---AT-----------CCACCCAATCAATCG--------TG
dm3 chr3L:1618555-1618811 + sblock95357 ----------TTGG----GACGCGCGAAATGCTACACACTC---GC------TAAGGGACCGGGAACACACGTGCAGGCAAGAGTGGTGAGTGCTC-----GG---CC-------------------------------TCTAGAC-CCATTTCAAGGCCACCT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGGTTTCGTAATTACGC--------GT-AAATACGCAATAAATTGGCGGTTTGA----------TTG-AGTGG----GGAC-AGCCGGCG------------------------------------------------------------------------ATCGGCGGGG-A------------------AAA---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTCTCCA-----C---TT-----------CCATCCGATCAATCT--------TG
droSim2 3l:1528477-1528733 + ----------TTGG----GACGCGCGAAATGCTACACACTC---GC------TAAGGGACCGGGAACACACGTGCAGGCAAGAGTGGTGAGTGCTC-----GG---CT-------------------------------TCTAGAC-CCATTTCAAGGCCACCT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTACGC--------GT-AAATACGCAATGAATTGGCGGTTTGA----------TTG-AGTGG----GGCC-AGCAAGCG------------------------------------------------------------------------ATCGGCGGGG-A------------------AAG---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTCTCCA-----C---TT-----------TCATTCGATCAATCC--------TG
droSec2 scaffold_2:1644843-1645099 + ----------TTGG----GACGCGCGAAATGCTACACACTC---GC------TAAGGGACCGGGAACACACGTGCAGGCAAGAGTGGTGAGTGCGC-----GG---CT-------------------------------TCTAGAC-CCATTTCAAGGCCACCT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTACGC--------GT-AAATACGCAATGAATTGGCGGTTTGA----------TTG-AGTGG----GGCC-AGCAAGCG------------------------------------------------------------------------ATCGGCGGGG-A------------------AAG---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTCTCCA-----C---TT-----------TCATTCGATCAATCC--------TG
droYak3 3L:1569640-1569886 + ----------TTGG----GACGCGCGAAATGCTACTCACTC---GC------TAAGGGACCGGTTACCCACGTGCAGGCAAGAGTGGTGAGTGCTC-----CG---CT-------------------------------TCTAGAC-CCATTTCAAGGCCACCT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTAGGC--------GTAAAATACGCAATGAATTGGCGGTTTGA----------TTG-AGTGG----GGAT-C--------------------------------------------------------------------------------------------------------------AC---CA--GTCTGCGTGTGCGTTGTTTTGGTCCATCTCCT-----C---TT-----------CCATACGATCAATCCTGAATTAATG
droEre2 scaffold_4784:1598093-1598361 + CC------ACTTGG----GACGCGCGAAATGCTACTCACTC---GC------TAAGGGACCGGTAACCCACGTGCAGGCAAGAGTGGTGAGTGCTC-----CG---CT-------------------------------ACTAGAC-CCATTTCAAGGCCACCT---GC-----T----AGACT---------------ATCTAGA-GA---------GATTACGATTTCGTAATTAGGC--------GCAAAATACGCAATGAATTGGCGGTTTGA----------TTG-AGTGG----GGAT-TACCAGCA------------------------------------------------------------------------AACGGCGGGG-A------------------AAA---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTATCCT-----C---TT-----------CCATCCGATCAATCCTGAATTAATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
----------T--------CCACATTGCATGCCACAAACAA---AC------TTA---------TACACGACTGCAAACGCGTGTGGTAAGTACAA-----TAAA-TA-------------------------------TCATAGC-AAAATTCAAGGCCACCTCGTGATATGCA--------T---------------AAA-TGGTTA---------GATTACGATTTCATAAGTTTG-------------------------------------ATAAATGTTA-AT-----------------------GATTAGGACAGCAT--------------------------------GCGTATTAAAAGTTAAAACAGAACGACATC---------------AAAGAGGTCAGGCAA---CA--ATTTGCGTGTGTGTTGTTTTGGCCCCTTTTCG-----CA---A-----------TTAA--------------CTCAATGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGTGTGTGTTGTTTTGG.........................................................2112.002001000010000000000000000000000000000000000000000000000000000000
...................CCACATTGCATGCCACAAACAA---AC------TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCGTGTGTGTTGTTTTG..........................................................2111.001000001000000000000000000000000000000000000000000000000000000000
droMoj3
----------T--------CCACATTACATGCCAGAAACAG-----------------ATCAGAACAAGACATCC-AGCATATGTGGTAAGTACAA-----------A--------------T---AACAAAAC-----GATAAAC-CAAATTCAAGGCCATTT---GC-----------------------------------GGCTA---------GGTTACGATTTCATAATGATAA--------AG-A-------------TTAACAGGCATG---------AT----GTGC----AGAT-TA-------------------------------TTGGCTATAAATAT------------------------------------ACAAGAA-AAAGAGCAAAGAGGTCAGGCAA---CA--GTATGCGTGTGTGTTGTTTTGGCCCCTTTTCG-----AAAAATTAGTTGATATTTTAT--------------TTTAATGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCGTGTGTGTTGTTTTGGC........................................................2211.001000010
....................................AACAG-----------------ATCAGAACAAGACAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droGri2
----------T--------CCACATTAAATGCCACAATCCACTTGG------------------CATACAAGGCCAATCGCGTGTGGTAAGTAAAA-----------A-------------------------------TCAAG-----ATTTCAAGGCCACACTCTGG-----T----AGATA---------------AAGTTTCCCA---------GATTACGATTTCATAAGTTTA-------------------------------------TTGA-------ATG-A----------------------TTAGAACAAAAGCAGCGCAGATTAGTTGC-----ATATGCTGCGGCTAATTAAA------------------------------AAAACAAAGAGGTCAGGCAA---CA--ATATGCGTGTGTGTTGTTTTGGCCCCTTTTGT-----AGACCCG-----------AGT-AG----------ATTTAACGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads
droWil2
------------------GCCGCAGCACATACCCCACTATT---GG------CAAGGGAGGCCACAACCACGTGCAACCAAGAGTTGTAAGTTTTTTTTTTTG-CGCTTAGTTTATTCAATTTCTGCT-----------CGT--GC-CTGATTCAAGGCCACAA---AA-----A-A-AAAAAATACCAAAAATAAATTATCTTGACTAGACCAAAAAGA---TTATTTAATAATGACGTGCAAAACTTTGAAATGTG-----CGTCGTTAATCTAA----------TAG-AATAG--------------------------------------------------------------------------------------------------------------TAGGTCAGGCAA---CA--GTTTGCGTGTGTGTTGTTTTGGCCCTTAACA---------------------------------------------AGASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGTGTGTGTTGTTTTGG.........................................................2115.00502012
............................ATACCCCACTATT---GG------CAAGGGAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.............................................G------CAAGGGAGGCCACAACCACGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
............................................................................................................................TGCT-----------CGT--GC-CTGATTCAAG...........................................................................................................................................................................................................................................................................................................................................................1911.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGTGTGTGTTGTTTTGG.........................................................2011.00100100
..............................................................CACAACCACGTGCAACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGTGTGTGTTGTTTTGGC........................................................2211.00100010
............................................GG------CAAGGGAGGCCACAACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGTGTGTGTTGTTTT...........................................................1911.00101000
dp5
------------------GCCGCGCGACATGCTACGGACTT---TT------TAAAGGAGCC---CGCCACGTGCCAGCGAGAGTGGTAAGTGTTC-----CGAGGCTC----------ATCTGCGCC-----------CGTGGCC-GTGTCTCAAGGCCACTC---GG----CTAGATAAAGT---------------CTCCCGACTA---------GATTACGATTTCGTAATTATGC--------GT-GAAT-C-----------GCAGTACTA----------TTGTAGCGG----AA-TATTCCATCAATTAGAATAGCATCA-----------------------------GGCAAAATGAA------AC----------------------CAAAGAAAGAGGTCAGGCAA---CA--GTATGCGTGTGTGTTGTTTTGGCCCTTTTAGAGATCGAGAGTGT-----------AAT--------------TTCAATGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGTGTGTGTTGTTTTGG.........................................................2012.0020100001000
......................................................AAGGAGCC---CGCCACGTGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................GCGCGACATGCTACGGACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTGTGTTGTTTTGGC........................................................2011.0010000000001
..........................................................AGCC---CGCCACGTGCCAGCGAGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
.................................................................................................................................................C-GTGTCTCAAGGCCACTC---GG----CTA........................................................................................................................................................................................................................................................................................................................................2311.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCGTGTGTGTTGTTTT...........................................................1911.0010000001000
.................................................................CGCCACGTGCCAGCGAGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................TT---TT------TAAAGGAGCC---CGCCACGTGCCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCGTGTGTGTTGTTTTGG.........................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGTGTGTGTTGTTTTGA.........................................................2020.5010100000000
droPer2
------------------GCCGCGCGACATGCTACGGACTT---GT------TAAAGGAGCC---CGCCACGTGCCAGCGAGAGTGGTAAGTGTTC-----CGGGGCTC----------ATCTGCGCC-----------CGTGGCC-GTGTCTCAAGGCCACTC---GG----CTAGATAAAGT---------------CTCCCGACTA---------GATTACGATTTCGTAATTATGC--------GT-GAAT-C-----------GCAGTACTA----------TTGTAGCGG----AA-TATTCCATCAATTAGAATAGCAACA-----------------------------GGCAAAATGAA------AG----------------------CAAAGAAAGAGGTCAGGCAA---CA--GTATGCGTGTGTGTTGTTTTGGCCCTTTTAGAGATCGAGAGTGT-----------AAT--------------TTCAATGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTGTGTTGTTTTGG.........................................................1912.002010001
.............................TGCTACGGACTT---GT------TAAAGGAGCC---CG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCGTGTGTGTTGTTTT...........................................................1911.001000001
...........................CATGCTACGGACTT---GT------TAAAGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTGTGTTGTTTTGGC........................................................2011.001000001
droAna3
----------CCAGTACTGCCGTACGCGATGCTACAAGCTA---GCCGCCTATAAAGG------AAGCCACGTGCAGGCACGAGTGGTGAGTACGC-----------A-------------------------------TTCAGCCGCCTTTTCAAGGCCACAT---GCTCTGCTAG--AGTCT---------------ATCTAGACCA-------GAGATTACGATTTCGTAAT-GTGC--------GC-TAATGTACAATGAATTGGCAGTTTAA----------TTA-AGTTCTGG-GAATATCCCATCA------------------------------------------------------------------------ATTAGCGGAG-AGAGCAGAAAGTGGTCAGGCAA---CA--GTATGCGTGTGTGTTGTTTTGGCCCTTTTTCA-----AAACTCG-----------AATTT---------------GAATSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................ACGCGATGCTACAAGCTA---GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.........................................................G------AAGCCACGTGCAGGCACGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..........................................................................CAGGCACGAGTGGTGAGTACGC-----------A-------------------------------.............................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................................................AGG------AAGCCACGTGCAGGCACGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.................................................CTATAAAGG------AAGCCACGTGCAGGCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...............ACTGCCGTACGCGATGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...............................................GCCTATAAAGG------AAGCCACGTGCAGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
...........................................................................AGGCACGAGTGGTGAGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............................................GCCTATAAAGG------AAGCCACGTGCAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
droBip1
------------------GCCGCATCCGATGCTACAAGCTA---GCCGCCTCCAAAGG------TAGCCACGTGCAGGCACGAGTGGTGAGTACGC-----------A-------------------------------TTCAGCCGCCTTTTCAAGGCCACCT---GCTCTGCTAG--AAGCT---------------ATCTAGACCA-------GAGATTATGATTTCGTAAT-GTGC--------GC-TAATGTACAATGAATTGGCAGTTTAA----------TTA-AGTGGGTGGAA-TATCCCCTCA------------------------------------------------------------------------ATTAGCGGAG-AGAGCCGAAAGTGGTCAGGCAA---CA--GTATGCGTGTGTGTTGTTTTGGCTCTTTTTCG-----AAACTCG-----------AATTT---------------GATTSizeHit CountTotal NormTotal
No Reads
droKik1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTA---------GATTGCGATTTCGTAATTACGC--------GT-AAATGCCGGATGAATTGGCGGTTTAATAA-------TTG-A-------------------------------------------------------------------------------------------------------------------TGGTCAGGCAGCGTCAGCTTCTGCGTGTGTGTTGTTTTGGCCCAATTTCC-----AAGCTTA-----------AATCCG----------AATTAATGSizeHit CountTotal NormTotal
No Reads
droFic1
----------TTAG----GTCGTGCGAAATGCTACACCCTC---GC------TAAGGG------CAGCCACGTGCAGGCAAGAGTGGTGAGTACCC-----CGTGATT-------------------CTGGCCCTAGAATCTAGAC-CCATTTCAAGGCCACAT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTAAGC--------GA-AAATACGCAATAAATTAGTGGTTTGA----------TTG-AGTGG----AAAT-TACCATCG------------------------------------------------------------------------ATTGGTTGGGGT------------------AAA---CA--GTCTGCGTGTGCGTTGCTTTGGTCCTTTTCCA-----C---AT-----------TCAACCGATTAAACATAAATTAATGSizeHit CountTotal NormTotal
No Reads
droEle1
ACCCGCTCACCTGG----GACGCGCGAAATGCTACACGCTC---GC------CAAGGG------AACACACGTGCAGGCCAGAGTGGTGAGTACTC-----C--------------------TGCGACCGGGTC-----TAGAGAC-CTATTTCAAGGCCACAA---GC-----G----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTAGGC--------GTTAAATACGCAATGAATTGGCGATTTAA----------ATG-CGTGG----AAAT-TACCAGCA------------------------------------------------------------------------ATAAGTGGGGCG------------------GAG---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTTTCCC-----C---AT-----------TTACCT----------------AAGSizeHit CountTotal NormTotal
No Reads
droRho1
TC------ACTTAG----GACGCGCGAAATGCTACACGTTC---GT------TAAGGG------AACACACGTGCAGGCCAGAGTGGTGAGTACTC-----CG---CG------------------ACCGGGTC-----TAGAGAC-CTATTTCAAGGCCACAT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTAGGC--------GT-AAATACGCAATGAATTGGCGGTTTGA----------TTG-AGTGG----AAAT-TACCAACA------------------------------------------------------------------------GTCATAGGGGCA------------------AAA---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTTTCCC-----A---TT------------TACCT---------------GATASizeHit CountTotal NormTotal
No Reads
droBia1
----------TTAG----GTCGCGCGAAATGCTACACCTTC---GC------TAAGGGAACGGGAACCCACGTGCACGCAAGAGTGGTAAGTACAC-----CGGGGTT-------------------------CTAGAATCTAGAC-CCATTTCAAGGCCACCT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTAGGT--------GTGAGATACGCAATGAATTGGCGGTTTGA----------TTG-AGCGG----G------------------------------------------------------------------------------------------------------------------TAT---CA--GTCTGCGTGTGCGTTGTTTTGGTCCCCTTCCC-----C---AC-----------AGAACCCATCA-----------ATCSizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA--GTCTGCGTGTGCGTTGTTTTGGTGCTCTTTTC-----TT----------------------ATCCATC--------CTGSizeHit CountTotal NormTotal
No Reads
droEug1
----------TTAG----GTCGCGCGAAATGCTACACGTTC---GT------TAAAGGAACTGGAAAACACGTGCAGGCAAGAGTGGTGAGTACTC-----CG---GG-------------------------------TCTAGTC-CAATTTCAAGGCCACAT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTGTGC--------GT-AAATGCGCAATAAATTGGCGGTTTGA----------TTG-AACGG----GAAT-TACCGACG------------------------------------------------------------------------ATCGGCAATG-A------------------GAA---CA--GTCTGCGTGTGCGTTGTTTTGGTCTTTTTCCT-----T---AT-----------CCACCCAATCAATCG--------TGSizeHit CountTotal NormTotal
No Reads
dm3
----------TTGG----GACGCGCGAAATGCTACACACTC---GC------TAAGGGACCGGGAACACACGTGCAGGCAAGAGTGGTGAGTGCTC-----GG---CC-------------------------------TCTAGAC-CCATTTCAAGGCCACCT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGGTTTCGTAATTACGC--------GT-AAATACGCAATAAATTGGCGGTTTGA----------TTG-AGTGG----GGAC-AGCCGGCG------------------------------------------------------------------------ATCGGCGGGG-A------------------AAA---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTCTCCA-----C---TT-----------CCATCCGATCAATCT--------TGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM231091

Ovary		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGTGTGCGTTGTTTTGGT........................................................22147.00470000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000000000000000000020000000000001000000010000100000000000000000000000000000010000000051201020000010100000100001000013010012101402300000001000003
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGTGTGCGTTGTTTTGG.........................................................21121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000020001000000000000000000200100000000100004000101000210000100
.........................................................................GCAGGCAAGAGTGGTGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................18119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000001000000000000010000000100000000000000010200000000400000000000000001200110000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGTGCGTTGTTTTGGT........................................................21116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000030000003000001000400000100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGTGCGTTGTTTTGGTC.......................................................22113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000010000010100000100000303
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCGTGTGCGTTGTTTTGG.........................................................22111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000100000100000001000000010010002100000100000000000
...........................................................................AGGCAAGAGTGGTGAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100010000000000000010000000000000000000000100000000000000001000110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGTGCGTTGTTTTGG.........................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000020000300000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTGCGTTGTTTTGGTCC......................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000004000000000000000000
.........................................................................GCAGGCAAGAGTGGTGAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100100000010000001000
...................................ACACTC---GC------TAAGGGACCGGGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GAACACACGTGCAGGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCGCGAAATGCTACACACTC---GC------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTGCGTTGTTTTGGT........................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGTTGTTTTGGTCC......................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000200000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGTGCGTTGTTTTGGTC.......................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000000000000000000000000000000100000000
.....................................ACTC---GC------TAAGGGACCGGGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CACGTGCAGGCAAGAGTGGTGAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001100000000000000000
.......................................................GGGACCGGGAACACACGTGCAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CACGTGCAGGCAAGAGTGGTGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000
..................................CACACTC---GC------TAAGGGACCGGGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGTGTGCGTTGTTTTGGTC.......................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000
....................................CACTC---GC------TAAGGGACCGGGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TAAGGGACCGGGAACACACGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCGTGTGCGTTGTTTTG..........................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000000
...........................AATGCTACACACTC---GC------TAAGGGACCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ATCTAGACTA---------GATTACGGTTTCGT................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GGACCGGGAACACACGTGCAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGTGTGCGTTGTTTTGGTCCTTC...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................ACACTC---GC------TAAGGGACCGGGAACACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TGCTC-----GG---CC-------------------------------TCTAGAC-CG...................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AAATGCTACACACTC---GC------TAAGGGACCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................ACTC---GC------TAAGGGACCGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................ACGTGCAGGCAAGAGTGGTGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................A--GTCTGCGTGTGCGTTGTTTTGGTCC......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AGGCAAGAGTGGTGAGTGCTC-----...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................................GC-----C----AGACT---------------ATCTAGACTA---------GATTA.........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CGGGAACACACGTGCAGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GGG-A------------------AAA---CA--GTCTGCGTG......................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ACGTGCAGGCAAGAGTGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................................TAAGGGACCGGGAACACACGTGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TACACACTC---GC------TAAGGGACCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................AGGGACCGGGAACACACGTGCAGGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GG----GGAC-AGCCGGCG------------------------------------------------------------------------ATCGGCGGGG-............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTGTTTTGGTCCTTCTCC................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....................................................................CACGTGCAGGCAAGAGTGGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
................................................................AACACACGTGCAGGCAAGAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................................................................................GACT---------------ATCTAGACTA---------GATT..........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ACACGTGCAGGCAAGAGTGGT................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................T---------------ATCTAGACTA---------GATTACGGTT....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GCCGGCG------------------------------------------------------------------------ATCGGCGGGG-A------------------AAA---CA--G..............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AATTGGCGGTTTGA----------TTG-AGTG.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................GGACCGGGAACACACGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
................................TACACACTC---GC------TAAGGGACCGGGAACAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CTC---GC------TAAGGGACCGGGAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGG----GACGCGCGAAATGCTACACACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTCCTTCTCCA-----C---TT-----------C........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCGTGTGCGTTGTTTT...........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................G-A------------------AAA---CA--GTCTGCGTGTGCGT.................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.....................................................AAGGGACCGGGAACACACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................TGCAGGCAAGAGTGGTGAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..................................................................CACACGTGCAGGCAAGAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GC------TAAGGGACCGGGAACACACGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACACTC---GC------TAAGGGACCGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................GACCGGGAACACACGTGCAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CGGGAACACACGTGCAGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ACACACGTGCAGGCAAGAGTGGTGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................A------------------AAA---CA--GTCTGCGTGTG....................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CCGGGAACACACGTGCAGGCAAGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CGGGG-A------------------AAA---CA--GTCTGCGTG......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CTC---GC------TAAGGGACCGGGAACACACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................GGACCGGGAACACACGTGCAGGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GGGAACACACGTGCAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGCTACACACTC---GC------TAAGGGACCGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CGCGCGAAATGCTACACACTC---GC------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ACACGTGCAGGCAAGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CACGTGCAGGCAAGAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................C------TAAGGGACCGGGAACACACGTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGG----GACGCGCGAAATGCTACACACTC---GC------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ACACACGTGCAGGCAAGAGTGGT................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGTGTGCGTTGTTTTGGC........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................GCAAGAGTGGTGAGTGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
....................................................................CACGTGCAGGCAAGAGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCGTGTGCGTTGTTTTGGT........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CACACGTGCAGGCAAGAGTGGTGAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCGTTGTTTTGGA........................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................CGGTTTGA----------TTG-AGTGG----GGCA-G......................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................ATTGGCGGTTTGA----------TC.......................................................................................................................................................................................................................1540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
----------TTGG----GACGCGCGAAATGCTACACACTC---GC------TAAGGGACCGGGAACACACGTGCAGGCAAGAGTGGTGAGTGCTC-----GG---CT-------------------------------TCTAGAC-CCATTTCAAGGCCACCT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTACGC--------GT-AAATACGCAATGAATTGGCGGTTTGA----------TTG-AGTGG----GGCC-AGCAAGCG------------------------------------------------------------------------ATCGGCGGGG-A------------------AAG---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTCTCCA-----C---TT-----------TCATTCGATCAATCC--------TGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................C---GC------TAAGGGACCGGGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
................................TACACACTC---GC------TAAGGGACCGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
............................................GC------TAAGGGACCGGGAACAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
..........................................................................................GTGCTC-----GG---CT-------------------------------TCTAGAC-C....................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
..................................CACACTC---GC------TAAGGGACCGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
.............................TGCTACACACTC---GC------TAAGGGACCGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
droSec2
----------TTGG----GACGCGCGAAATGCTACACACTC---GC------TAAGGGACCGGGAACACACGTGCAGGCAAGAGTGGTGAGTGCGC-----GG---CT-------------------------------TCTAGAC-CCATTTCAAGGCCACCT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTACGC--------GT-AAATACGCAATGAATTGGCGGTTTGA----------TTG-AGTGG----GGCC-AGCAAGCG------------------------------------------------------------------------ATCGGCGGGG-A------------------AAG---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTCTCCA-----C---TT-----------TCATTCGATCAATCC--------TGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
........................................C---GC------TAAGGGACCGGGAACACACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.............................TGCTACACACTC---GC------TAAGGGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTTGTTTTGGTCCT.....................................................1811.0010001
...........................AATGCTACACACTC---GC------TAAGGGACCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGTGTGCGTTGTTTTGG.........................................................2111.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTGCGTTGTTTTGGTC.......................................................2011.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGTGCGTTGTTTTGG.........................................................2011.0010100
.........................................................................GCAGGCAAGAGTGGTGAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
...................................ACACTC---GC------TAAGGGACCGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................................ACACTC---GC------TAAGGGACCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.................................................................ACACACGTGCAGGCAAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
droYak3
----------TTGG----GACGCGCGAAATGCTACTCACTC---GC------TAAGGGACCGGTTACCCACGTGCAGGCAAGAGTGGTGAGTGCTC-----CG---CT-------------------------------TCTAGAC-CCATTTCAAGGCCACCT---GC-----C----AGACT---------------ATCTAGACTA---------GATTACGATTTCGTAATTAGGC--------GTAAAATACGCAATGAATTGGCGGTTTGA----------TTG-AGTGG----GGAT-C--------------------------------------------------------------------------------------------------------------AC---CA--GTCTGCGTGTGCGTTGTTTTGGTCCATCTCCT-----C---TT-----------CCATACGATCAATCCTGAATTAATGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.........................GAAATGCTACTCACTC---GC------TAAGGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
..............................GCTACTCACTC---GC------TAAGGGACCGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...........................AATGCTACTCACTC---GC------TAAGGGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
droEre2
CC------ACTTGG----GACGCGCGAAATGCTACTCACTC---GC------TAAGGGACCGGTAACCCACGTGCAGGCAAGAGTGGTGAGTGCTC-----CG---CT-------------------------------ACTAGAC-CCATTTCAAGGCCACCT---GC-----T----AGACT---------------ATCTAGA-GA---------GATTACGATTTCGTAATTAGGC--------GCAAAATACGCAATGAATTGGCGGTTTGA----------TTG-AGTGG----GGAT-TACCAGCA------------------------------------------------------------------------AACGGCGGGG-A------------------AAA---CA--GTCTGCGTGTGCGTTGTTTTGGTCCTTATCCT-----C---TT-----------CCATCCGATCAATCCTGAATTAATGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGTGTGCGTTGTTTTGG.........................................................2111.0010000100
.......................................TC---GC------TAAGGGACCGGTAACCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.....................................................AAGGGACCGGTAACCCACGTGCAGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................G-A------------------AAA---CA--GTCTGCGTGTGC...................................................................1911.0010000010
..............................GCTACTCACTC---GC------TAAGGGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010

Generated: 06/28/2015 at 04:18 PM