ID:

dvi_18357

 Coordinate:

scaffold_13049:4837056-4837206 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ12975-cds]; exon [dvir_GLEANR_12904:5]; intron [Dvir\GJ12975-in]

Repeatable elements

NameClassFamilyStrand
(TA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGAATGCAACGAATGGACGACAACTGCAGCAGGACGATGACGATACAGAGGTATAGTTTAGTGCAGCGCTTATCAAAATAAAGCCTTTTGACGCCTGCCCCGCGCTGCCCGCCTGTGCTGCCTCTCTCTTATACATATAATCTTATTACGTTTACATATATATATATATATATTTATATATCAAGTTTGGTTCGTTTATATATATATATACATTTATATATATATATATATATATAGATAGACGTTCTACT
*******************************************************.......(((((((...((((((.......))))))..........))))))).********************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060686
Argx9_0-2h_embryos_total
 M027
male body		 SRR060684
140x9_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 V047
embryo
 SRR060678
9x140_testes_total
 SRR060679
140x9_testes_total
 SRR060681
Argx9_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 V053
head
 SRR060685
9xArg_0-2h_embryos_total
 M061
embryo
 SRR060666
160_males_carcasses_total
 GSM1528803
follicle cells		 SRR060662
9x160_0-2h_embryos_total
 V116
male body		 SRR060687
9_0-2h_embryos_total
 M028
head
 SRR060689
160x9_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR1106723
embryo_12-14h
........................................................................................TGACGCCTGCCCGGTGCTG................................................................................................................................................ 19 2 5 7.60 38 6 2 11 5 0 0 7 1 1 1 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0
.........................................................................................GACGCCTGCCCGGTGCTG................................................................................................................................................ 18 2 8 2.25 18 4 0 12 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........AATGGACGACAACTGCAGCAG........................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................ATATATCAAGTTTGGTTCGTTTATATAT................................................ 28 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TGACGCCTGCCCGGTGCT................................................................................................................................................. 18 2 7 1.71 12 5 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 0
.......................................................................................CTGACGCCTGCCCGGTGCTG................................................................................................................................................ 20 3 17 1.06 18 2 0 5 2 0 0 6 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0
..................GACAACTGCAGCAGGACGATGACGAT............................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATGGACGACAACTGCAGCAGG.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GAATGGACGACAACTGCAGC............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GTTTAGTGCAGCGCTTATCAAAA............................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........GAATGGACGACAACTGCAGCA............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGCAGCAGGACGATGACG................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TGACGCCTGCCCCGCGCTGCC.............................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................CAACTGCAGCAGGACGATGACGA................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GACGATGACGATACAGAG......................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGCAGCAGGACGATGACGATACA............................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................ATATTTATATATCAAGTTTG.............................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................ATCAAGTTTGGTTCGTTTAT.................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................CAACTGCAGCAGGACGATGACG................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AATGGACGACAACTGCAGCAGG.......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TATATATGGATAGACGTTC.... 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCTCTTATACATATAATCTTATTACGTT................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTAAATCCTTTTGACGCCTGCT........................................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TATATCTCAGGTTTTGTTCGTTT...................................................... 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................GACGACTGCAGCAGGCCGAGGA................................................................................................................................................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GACGATGACGGTACAGAC......................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TATAGTGCAGTGGTTATCA................................................................................................................................................................................ 19 3 20 0.15 3 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................CTGACGCCTGCCCGGCGC.................................................................................................................................................. 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................GCCTTTTGACGCCTTCCGT...................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTAGTGCAGTGGTTATCA................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............TGGACGAGAACTGCACC............................................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................GTCTGACGCCTGCCCCGTGC.................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CCTTACGTTGCTTACCTGCTGTTGACGTCGTCCTGCTACTGCTATGTCTCCATATCAAATCACGTCGCGAATAGTTTTATTTCGGAAAACTGCGGACGGGGCGCGACGGGCGGACACGACGGAGAGAGAATATGTATATTAGAATAATGCAAATGTATATATATATATATATAAATATATAGTTCAAACCAAGCAAATATATATATATATGTAAATATATATATATATATATATATCTATCTGCAAGATGA
**********************************************************************************************************************************************.......(((((((...((((((.......))))))..........))))))).******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060666
160_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060687
9_0-2h_embryos_total
 V116
male body		 SRR060682
9x140_0-2h_embryos_total
 M047
female body
 SRR060655
9x160_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060664
9_males_carcasses_total
 V053
head
 SRR060672
9x160_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
...............................................................................................................................................................................TATATACCTCAAAACAAGCAAATA.................................................... 24 3 1 7.00 7 3 2 0 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TATATACCTCAAAACAAGCAAAT..................................................... 23 3 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GACGGAGAGAGAATATGTATA................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................ACGGAGAGAGAATATGTATAT................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................AATCACGTCGCGAATAGTTTT............................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................ATATACCTCAAAACAAGCAAATA.................................................... 23 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TATATACCTCAAAACAAGCAAA...................................................... 22 3 8 0.50 4 1 0 0 0 1 0 0 1 1 0 0 0 0
...............................................................................................................................................................................TATATACCTCAAAACAAGCAA....................................................... 21 3 15 0.33 5 1 1 0 0 0 0 0 1 0 1 0 0 1
................................................................................................................................................................................ATATACCTCAAAACAAGCAAAT..................................................... 22 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ATATATACCTCAAAACAAGCAA....................................................... 22 3 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TATATCTCAAAACAAGCAAATA.................................................... 22 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................CTGTTAACGTTGTCCTACTA..................................................................................................................................................................................................................... 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................ATATGTAAATATATATATA.......................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................TATGTAGGTCCAACCAAGC......................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................TATGTAGTTGGAACCAAGC......................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................AATGTATATATATATATATATA.............................................................................. 22 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:4837006-4837256 + dvi_18357 GGAATGCAACGAATGGACGACAACTGCAGCA---GGACGATGACGATACAGAGGTATAGTTTAGTGCAGCGCTT-AT---CAA-----------------------------------------------AATAAAGCCTTTTGACGCCTGCCCCGCGCTGCCCGCCTGTGCTGCCTC----TCTC--------------TTAT----ACATATAATCTTATTACGTTTACATATATATA------T----------------ATAT---------------ATATTTATATATCAAGTTTGGTTCGTTTATATA------------TATATATACATTTA----------------TATATA------------TAT---------ATATATAT----ATAGA---TAGACGTTCTAC--T
droMoj3 scaffold_6680:3228687-3228996 + GCAATGCAACGAATGGACGACAACTGCAGCA---GGACGACGATGATACAGAGGTATAGTTTAGAGCAGCGCTT-AT---CAAACAGACAAAAGAAAAAAAAAAACAAAAACAAACAAAAAAGAAACCATAAGAAAGCCTTT-GACGCCTGCCCCACGCTGCCCGCCTGTGCTGCC------TCTCTATCTCTATCTCTCTTATATATACATATAATCTTATTATATATATATACATATA------T----------------ATA---------------TGTATATATATATAAATTTTAGTTCGTTTATATA------TACA---TTATATATATATA----------------TATATA--------------TATATATACA--------------------TAGACGTTCTAT--T
droGri2 scaffold_15110:10092494-10092707 - GCAACGCAACGAATGGAAGACAGCTGCAGCA---GGACGATGACGATACAGAGGTATAGTTTTGTGCAGCGCTT-TT---GAA---------------------------------------------ATAATAAAGCCTTT-GACGCCTGCCCCGCGCTGCCCGCCTGTGCTGCCTA----TCTC--------------TTAT-------------------------------------------ATATATGTATATATATATAG--ATA-------TATG---------TATATC-----------------------------TTTATACATGTGTA----------------TATATACATATATGTATATAT---------TTATATATA----TAA------------------A
droWil2 scf2_1100000004822:3115605-3115836 + dwi_2212 GCAATGCCACCAATGGACGTCAACAGCAGCA---GGATGATGATGATACAGAGGTATAGTTAGAAAAACAAAAACAC---A---------A--------ATATCAAAAAGAAAAAAAAAAAAGA-----------AAAAAAA-GCCGCCTGCTAC--GCTGC-CGCCTAAGCTGCT-A----TCTAT--------------TAT-------------------------------------------ACCAACATATATATATATATACATA-------------------------------TATATATATATA--------------TATATATATGTG----------------TGTGTGTA----------TATGTATATATAT-------T------GA---AATACT---TATTAC
dp5 XR_group6:12892550-12892760 + GCAATGTCACCAATGGGCGACAGCAGCAGCA---GGACGACGACGATACAGAGGTATAGTTTTGTTCAAAGC------------------------------------------------------------------CTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-----------------TACAC-----------------------------------------------------------ATTACTCTTATG---------ATTACTTTTGGTTCGTTTATATA------TACA--TCTATATCTACCTA----------------TATATA----------------------CATTATATATACAACTAGATCTTACAACTGCTAT--T
droPer2 scaffold_33:916232-916442 + GCAATGTCACCAATGGGCGACAGCAGCAGCA---GGACGACGACGATACAGAGGTATAGTTTTGTTCAAAGC------------------------------------------------------------------CTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-----------------TACAC-----------------------------------------------------------ATTACTCTTATG---------ATTACTTTTGGTTCGTTTATATA------TACA--TCTATATCTACCTA----------------TATATA----------------------CATTATATATACAACTAGATCTTACAACTGCTAT--T
droAna3 scaffold_13064:44292-44514 + GAAATGTCACCAATGGGCGACAGCAGCAGCA---GGACGATGATGACACAGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGAGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACTTTTGGTTCGTTTATACATA--TATACATTATTATATATGCCTATA--------------TATATA----------------------CATTATATAAT---TTAGATTTTACAACTGCTAT--T
droBip1 scf7180000395543:37824-38031 - GGAATGTCACCAATGGGCGACAGCAGCAGCA---GGACGATGATGACACAGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------ATCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGAGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACTTTTGGTTCGTTTATACATATATATACATTATTATATATGCCTA----------------TATATATA----------------TATACATTATATAA--------------------------T
droKik1 scf7180000302486:1129395-1129614 - GGAATGTCACCAATGGGCGACAGCAGCAGCAGCTGGACGACGACGACACTGAGGTATAGTTTTGTTCACAGCCTGATCATC------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-ATCTATTTATATA-------------------TAT-------------------------ATATATATAT----------------ATT-----ATTACTCTTATG---------ATTACCCTTGGTTCGTTTATA--------------------------TA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--T
droFic1 scf7180000453833:608151-608361 + GAAATGTCACCAATGGGCGACAGCAGCAGCA---GGACGACGATGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATACC---TTAGATTTTACAACTGCTAT--T
droEle1 scf7180000491268:263584-263810 - GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTATATATATCTATATATATATATA----------------------TATTATATAAT---TTAGATTTTAAAACTGCTAT--T
droRho1 scf7180000775259:1329-1453 - TATATAT--------------------------------------------ATATATATATATATATA-----------------------------------------------------------------------------------------------------------T-A----TATATATA-------------------TAT---------------------------A------TATATATATATATATATATAT-------------------------------ATATATATATATATATA--------------TATATATATATA----------------TATATA----------------------TA-TATATATA---TATATATATATATTAATTAT--T
droBia1 scf7180000302428:10369606-10369826 + GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------TAT-------------------------ATATATATAC------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTACATACT---TTAGATTTTACAACTGCTAT--T
droTak1 scf7180000414445:293684-293900 - GCAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------TAT-------------------------ATA----TAC------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTAAACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--T
droEug1 scf7180000409524:224811-225028 - GGAATGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGC------------------------------------------------------------------CTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTATATATATACATATATATATATA----------------------TATTATATATT---TTAGATTTTACAACTGCTAT--T
dm3 chr3L:8420454-8420664 + GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--T
droSim2 3l:8226464-8226674 + GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--T
droSec2 scaffold_0:716479-716688 + GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATAT-TT---TTAGATTATACAACTGCTAT--T
droYak3 3L:3477361-3477571 - GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--T
droEre2 scaffold_4784:5611943-5612153 - GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GGAATGCAACGAATGGACGACAACTGCAGCA---GGACGATGACGATACAGAGGTATAGTTTAGTGCAGCGCTT-AT---CAA-----------------------------------------------AATAAAGCCTTTTGACGCCTGCCCCGCGCTGCCCGCCTGTGCTGCCTC----TCTC--------------TTAT----ACATATAATCTTATTACGTTTACATATATATA------T----------------ATAT---------------ATATTTATATATCAAGTTTGGTTCGTTTATATA------------TATATATACATTTA----------------TATATA------------TAT---------ATATATAT----ATAGA---TAGACGTTCTAC--TSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........AATGGACGACAACTGCAGCA---G...................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000001000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ATATATCAAGTTTGGTTCGTTTATATA------------T..............................................................................................2812.002000000000000001100000000000000000000000000000000000000000000000
..................GACAACTGCAGCA---GGACGATGACGAT.......................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000010000000000000000000000000000000
............ATGGACGACAACTGCAGCA---GG..................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
..........GAATGGACGACAACTGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
..........................................................GTTTAGTGCAGCGCTT-AT---CAA-----------------------------------------------AA..................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
..........GAATGGACGACAACTGCAGCA---....................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
........................TGCAGCA---GGACGATGACG.........................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TGACGCCTGCCCCGCGCTGCC...................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
....................CAACTGCAGCA---GGACGATGACGA........................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
...................................GACGATGACGATACAGAG.................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
........................TGCAGCA---GGACGATGACGATACA....................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................ATATTTATATATCAAGTTTG........................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................ATCAAGTTTGGTTCGTTTAT..............................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
....................CAACTGCAGCA---GGACGATGACG.........................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
...........AATGGACGACAACTGCAGCA---GG..................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................TCTC--------------TTAT----ACATATAATCTTATTACGTT..................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
GCAATGCAACGAATGGACGACAACTGCAGCA---GGACGACGATGATACAGAGGTATAGTTTAGAGCAGCGCTT-AT---CAAACAGACAAAAGAAAAAAAAAAACAAAAACAAACAAAAAAGAAACCATAAGAAAGCCTTT-GACGCCTGCCCCACGCTGCCCGCCTGTGCTGCC------TCTCTATCTCTATCTCTCTTATATATACATATAATCTTATTATATATATATACATATA------T----------------ATA---------------TGTATATATATATAAATTTTAGTTCGTTTATATA------TACA---TTATATATATATA----------------TATATA--------------TATATATACA--------------------TAGACGTTCTAT--TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............ATGGACGACAACTGCAGCA---....................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
......CAACGAATGGACGACAACTGCAGCA---G...................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
................................................................AGCAGCGCTT-AT---CAAACAGAC.............................................................................................................................................................................................................................................................................................................................................2111.001100000
..................GACAACTGCAGCA---GGACGAC.............................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................................................................................................................................................TATA------TACA---TTATATATATATA----------------T................................................................2250.201000010
droGri2
GCAACGCAACGAATGGAAGACAGCTGCAGCA---GGACGATGACGATACAGAGGTATAGTTTTGTGCAGCGCTT-TT---GAA---------------------------------------------ATAATAAAGCCTTT-GACGCCTGCCCCGCGCTGCCCGCCTGTGCTGCCTA----TCTC--------------TTAT-------------------------------------------ATATATGTATATATATATAG--ATA-------TATG---------TATATC-----------------------------TTTATACATGTGTA----------------TATATACATATATGTATATAT---------TTATATATA----TAA------------------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................TTGTGCAGCGCTT-TT---GAA---------------------------------------------AT....................................................................................................................................................................................................................................................................................................2012.00220
droWil2
GCAATGCCACCAATGGACGTCAACAGCAGCA---GGATGATGATGATACAGAGGTATAGTTAGAAAAACAAAAACAC---A---------A--------ATATCAAAAAGAAAAAAAAAAAAGA-----------AAAAAAA-GCCGCCTGCTAC--GCTGC-CGCCTAAGCTGCT-A----TCTAT--------------TAT-------------------------------------------ACCAACATATATATATATATACATA-------------------------------TATATATATATA--------------TATATATATGTG----------------TGTGTGTA----------TATGTATATATAT-------T------GA---AATACT---TATTACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................AAAAAA-GCCGCCTGCTAC--GCTGC-...................................................................................................................................................................................................................................................................2311.00101000
...............................................ACAGAGGTATAGTTAGAAAAAC.................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...ATGCCACCAATGGACGTCA................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
...................TCAACAGCAGCA---GGATGATGATGA........................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
....................CAACAGCAGCA---GGATGAT.............................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.................................................................................................................................................................................................................................................................................................................................................TGTG----------------TGTGTGTA----------TATGTATATAT....................................23140.21300021
...............................................................................................................................................................................................................................................................................................................................................TATGTG----------------TGTGTGTA----------TATGTAT........................................2170.14101000
..........................................................................................................................................................................................................................................................................................................................A--------------TATATATATGTG----------------TGTGTGT..........................................................20200.10200020
.........................................................................................................AAAAGAAAAAAAAAAAAGA-----------...............................................................................................................................................................................................................................................................................................19200.05100010
dp5
GCAATGTCACCAATGGGCGACAGCAGCAGCA---GGACGACGACGATACAGAGGTATAGTTTTGTTCAAAGC------------------------------------------------------------------CTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-----------------TACAC-----------------------------------------------------------ATTACTCTTATG---------ATTACTTTTGGTTCGTTTATATA------TACA--TCTATATCTACCTA----------------TATATA----------------------CATTATATATACAACTAGATCTTACAACTGCTAT--TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................AGCAGCAGCA---GGACGACGACG.........................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.....................................CGACGACGATACAGAGGT...............................................................................................................................................................................................................................................................................................................................................................................1812.0020200000000
...................................................................................................................................................................................................................C-----------------------------------------------------------ATTACTCTTATG---------ATTACTTTTGGTT.....................................................................................................................2612.0020200000000
.............................CA---GGACGACGACGATACAGA..................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................AGCAGCA---GGACGACGACGATAC.....................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..................................................................CAAAGC------------------------------------------------------------------CTGA-TCCGCCTGCTCC--GCT......................................................................................................................................................................................................................................................................2511.0010100000000
.....................AGCAGCAGCA---GGACGACGAC..........................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................CAACTAGATCTTACAACTG.......1911.0010000100000
................................................................TTCAAAGC------------------------------------------------------------------CTGA-TCCGCCTGC..............................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................AGC------------------------------------------------------------------CTGA-TCCGCCTGCTCC--GT.......................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................GC------------------------------------------------------------------CTGA-TCCGCCTGCTCC--GCT......................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ATACAACTAGATCTTACAACTGCTAT--T2711.0010100000000
.........................................................................................................................................................................TGCTGCT-A----TTTATATA-----------------TACAC-----------------------------------------------------------.......................................................................................................................................................2111.0010100000000
..........................................................GTTTTGTTCAAAGC------------------------------------------------------------------CTGA-TCC....................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................GTTTTGTTCAAAGC------------------------------------------------------------------CTGA-TCCGCCT................................................................................................................................................................................................................................................................................2511.0010100000000
......TCACCAATGGGCGACAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
GCAATGTCACCAATGGGCGACAGCAGCAGCA---GGACGACGACGATACAGAGGTATAGTTTTGTTCAAAGC------------------------------------------------------------------CTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-----------------TACAC-----------------------------------------------------------ATTACTCTTATG---------ATTACTTTTGGTTCGTTTATATA------TACA--TCTATATCTACCTA----------------TATATA----------------------CATTATATATACAACTAGATCTTACAACTGCTAT--TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................A---GGACGACGACGATACAGAGGTATA............................................................................................................................................................................................................................................................................................................................................................................2512.002200000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATATATACAACTAGATCTTACAACT........2511.001100000
.......................CAGCAGCA---GGACGACGACGATA......................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................CAACTAGATCTTACAACTGCT.....2111.001100000
..............GGGCGACAGCAGCAGCA---GGAC................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................GACGACGACGATACAGAGGT...............................................................................................................................................................................................................................................................................................................................................................................2011.001001000
....................................ACGACGACGATACAGAGGTAT.............................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................ACAACTAGATCTTACAACT........1911.001001000
.............................CA---GGACGACGACGATACAGAGGTATA............................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.......CACCAATGGGCGACAGCAGCAGCA---....................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................GACAGCAGCAGCA---GGACGACGACGATA......................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droAna3
GAAATGTCACCAATGGGCGACAGCAGCAGCA---GGACGATGATGACACAGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGAGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACTTTTGGTTCGTTTATACATA--TATACATTATTATATATGCCTATA--------------TATATA----------------------CATTATATAAT---TTAGATTTTACAACTGCTAT--TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................CAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCT.............................................................................................................................................................................................................................................................................2720.501100000
..........................................................................................................................................CTGA-TCCGCCTGCTCC--GCTGC-...................................................................................................................................................................................................................................................................2120.501100000
............................GCA---GGACGATGATGACACAGAGGT...............................................................................................................................................................................................................................................................................................................................................................................2420.501000010
............................................GACACAGAGGTATAGTTTTGTTCACAGCC.............................................................................................................................................................................................................................................................................................................................................................2920.501010000
......................................................................................................................................................GCTCC--GCTGC-CGCCTGAGCT.........................................................................................................................................................................................................................................................2020.501100000
droBip1
GGAATGTCACCAATGGGCGACAGCAGCAGCA---GGACGATGATGACACAGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------ATCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGAGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACTTTTGGTTCGTTTATACATATATATACATTATTATATATGCCTA----------------TATATATA----------------TATACATTATATAA--------------------------TSizeHit CountTotal NormTotal
No Reads
droKik1
GGAATGTCACCAATGGGCGACAGCAGCAGCAGCTGGACGACGACGACACTGAGGTATAGTTTTGTTCACAGCCTGATCATC------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-ATCTATTTATATA-------------------TAT-------------------------ATATATATAT----------------ATT-----ATTACTCTTATG---------ATTACCCTTGGTTCGTTTATA--------------------------TA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--TSizeHit CountTotal NormTotal
No Reads
droFic1
GAAATGTCACCAATGGGCGACAGCAGCAGCA---GGACGACGATGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATACC---TTAGATTTTACAACTGCTAT--TSizeHit CountTotal NormTotal
No Reads
droEle1
GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTATATATATCTATATATATATATA----------------------TATTATATAAT---TTAGATTTTAAAACTGCTAT--TSizeHit CountTotal NormTotal
No Reads
droRho1
TATATAT--------------------------------------------ATATATATATATATATA-----------------------------------------------------------------------------------------------------------T-A----TATATATA-------------------TAT---------------------------A------TATATATATATATATATATAT-------------------------------ATATATATATATATATA--------------TATATATATATA----------------TATATA----------------------TA-TATATATA---TATATATATATATTAATTAT--TSizeHit CountTotal NormTotal
No Reads
droBia1
GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------TAT-------------------------ATATATATAC------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTACATACT---TTAGATTTTACAACTGCTAT--TSizeHit CountTotal NormTotal
No Reads
droTak1
GCAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------TAT-------------------------ATA----TAC------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTAAACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--TSizeHit CountTotal NormTotal
No Reads
droEug1
GGAATGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGC------------------------------------------------------------------CTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTATATATATACATATATATATATA----------------------TATTATATATT---TTAGATTTTACAACTGCTAT--TSizeHit CountTotal NormTotal
No Reads
dm3
GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................ACTGAGGTATAGTTTTGTTC...................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................CTGCTCC--GCTGC-CGCCTGTGCT.........................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
...ACGTCACCAATGGGCGACA................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ATG---------ATTACCTTTGGTTCGTTTATAC............................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTTGGTTCGTTTATACA------------GTTATATA.......................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................GCCTGA-TCCGCCTGCTCC--G........................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TATAGTTTTGTTCACAGCCTG...........................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000
..............................A---GGAAGAAGACGACACTG...................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TG---------ATTACCTTTGGTTCGTTTATACA------------GT.............................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..............................................CACTGAGGTATAGTTTTGTTCACAGCC.............................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................CTGTGCTGCT-A----TTTATATA-------------------CA...................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TATT---TTAGATTTTACAACTGC......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......TCACCAATGGGCGACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TTATACA------------GTTATATATGCCTA----------------TAT..............................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............ATGGGCGACAGCAGCAGCA---GGAAGAA.............................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGGGCGACAGCAGCAGCA---GGAAGA..............................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............GGCGACAGCAGCAGCA---GGAAGAAGAC..........................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000
..................................................................CACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGC..................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTTTGTTCACAGCCTGAT---C------------------------------------------------------AG.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................CTCC--GCTGC-CGCCTGTGCTGC.......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACGTCACCAATGGGCGACAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CACCAATGGGCGACAGCAGCAGCA---....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................CC--GCTGC-CGCCTGTGCTGCT-.....................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................CTCC--GCTGC-CGCCTGTGCT.........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCT......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TA----------------TATATA----------------------CATTATATATT---TTAGAT.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TA----------------TATATA----------------------CATTATATATT---TTAGATTT...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTATATATT---TTAGATTTTACAACTGCTT....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CACAGCCTGAT---C------------------------------------------------------AGCCTG.........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TATG---------ATTACCTTTGGTTCGTTT................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--G........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCAGCA---GGAAGAAGACGA........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................GAAGACGACACTGAGGTATAGTTTTGT.....................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TACTCTTATG---------ATTACCTTTGGTTCGTT.................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................CACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCG...................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....................................................................CAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCG...................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................T-----------------------------------------------------------ATTACTCTTATG---------ATTAC.............................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CTGAGGTATAGTTTTGTTCACAGC..............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GTTCACAGCCTGAT---C------------------------------------------------------AGCCTG.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................................................................................................................................................................................................................................................................TATG---------ATTACCTTTGGTTCGTT.................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................TCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCT................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................T-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTC....................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCC....................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTTGGTTCGTTTATACA------------GTTATATATG.....................................................................................2711.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CTTTGGTTCGTTTATACA------------GT.............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........AATGGGCGACAGCAGCAGCA---GGAA................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................................................................CCTGCTCC--GCTGC-CGCCTGTGCT.........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TG---------ATTACCTTTGGTTCGTTTATACA------------GTC............................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCG...................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCC...........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTC................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TTACTCTTATG---------ATTACCTTTGGTTCGTT.................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............GGCGACAGCAGCAGCA---GGAAGAAGA...........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCAGCA---GGAAGAAGACGACA......................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AGCCTGA-TCCGCCTGCTCC--GC.......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ATT---TTAGATTTTACAACTGCTAT--.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ATACA------------GTTATATATGCCTA----------------TATATA----------------------CATT.................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AT-----------------------------------------------------------ATTACTCTTATG---------ATTACCT...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ATATA----------------------CATTATATATT---TTAGATTT...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AATGGGCGACAGCAGCAGCA---GG..................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TGTGCTGCT-A----TTTATATA-------------------CA...................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......CACCAATGGGCGACAGCAGCAGCA---GGAA................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ACCTTTGGTTCGTTTATACA------------GTT............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TCCGCCTGCTCC--GCTGC-CGCCTGTGCT.........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCAGCAGCA---GGAAGAAGACGACAC.....................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATGGGCGACAGCAGCAGCA---GGAAG...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGCAGCAGCA---GGAAGAAGACGA........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TATA----------------------CATTATATATT---TTAGATTTTACAAC.........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GGAACGTCACCAATGGGCGACAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCAGCA---GGAAGAAGACGACACTGAG.................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACCAATGGGCGACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TATATA----------------------CATTATATATT---TTAGATT................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCT................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CGCCTGCTCC--GCTGC-CGCCTGTGCC.........................................................................................................................................................................................................................................................2511.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GACAGCAGCAGCA---GGAAGAAG............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................TATATT---TTAGATTTTACAACTGCTAT--.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TCTTATG---------ATTACCTTTGGTTC....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CTGA-TCCGCCTGCTCC--GCTGC-...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................A------------GTTATATATGCCTA----------------TATATA----------------------C....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ATACA------------GTTATATATGCCTA----------------TAT..............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GA-TCCGCCTGCTCC--GCTGC-CGCC...............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAGCAGCAGCA---GGAAGAAG............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ACA------------GTTATATATGCCTA----------------TATATA----------------------C....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCC....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGACGACACTGAGGTATAGTT.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
............ATGGGCGACAGCAGCAGCA---GGAAGAAG............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CTTATG---------ATTACCTTTGGTTCGTTT................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CTGAGGTATAGTTTTGTTCACA................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...........AATGGGCGACAGCAGCAGCA---G...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAGCAGCA---GGAAGAAGACGAC.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................TGAGGTATAGTTTTGTTCACA................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CCTA----------------TATATA----------------------CATTATATATT---TTAGA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................TACTCTTATG---------ATTACCTTTGGTTCG...................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........ACCAATGGGCGACAGCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................ATTACTCTTATG---------ATTACCTTTGGTTC....................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ACGACACTGAGGTATAGTTT........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TATT---TTAGATTTTACAAA.........1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droSim2
GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................TATG---------ATTACCTTTGGTTCGTTTATACA------------GT.............................................................................................2912.00200000000020000000
.....................AGCAGCAGCA---GGAAGAAGACGAC.......................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
..........................................................................................................................................................................................................................................................................................G---------ATTACCTTTGGTTCGTTTATAC............................................................................................................2311.00100010000000000000
......................GCAGCAGCA---GGAAGAAGA...........................................................................................................................................................................................................................................................................................................................................................................................1831.00300000300000000000
...................................................................ACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCC.................................................................................................................................................................................................................................................................................2411.00100000000001000000
..............................................................TGTTCACAGCCTGAT---C------------------------------------------------------AGCCTG.........................................................................................................................................................................................................................................................................................2211.00101000000000000000
....................................................................................................................................................................................................................................................................................TCTTATG---------ATTACCTTTGGTTCGTT.................................................................................................................2411.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TT---TTAGATTTTACAAC.........1620.50100000000001000000
droSec2
GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATAT-TT---TTAGATTATACAACTGCTAT--TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................TGCTCC--GCTGC-CGCCTGTGCT.........................................................................................................................................................................................................................................................2111.0010001
.............................................................................................................................................A-TCCGCCTGCTCC--GCTGC-CG.................................................................................................................................................................................................................................................................2011.0011000
..........................................................................................................................................................................................................................................................................................................TTTGGTTCGTTTATACA------------GTT............................................................................................2011.0010100
...................................................................................................................................................................................................................................................................................CTCTTATG---------ATTACCTTTGGTT.....................................................................................................................2111.0011000
.............TGGGCGACAGCAGCAGCA---GGAA................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
..........CAATGGGCGACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
droYak3
GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................GAAGAAGACGACACTGAGGTATAGTTTT.......................................................................................................................................................................................................................................................................................................................................................................2814.00400000000004
.GAACGTCACCAATGGGCGACAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
................................................................TTCACAGCCTGAT---C------------------------------------------------------AGCCT..........................................................................................................................................................................................................................................................................................1911.00100010000000
...............................................................................................................................................................................................................................................................................ATTACTCTTATG---------ATTACCTTTGGTTC....................................................................................................................2611.00101000000000
............................................................................T---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-...................................................................................................................................................................................................................................................................2611.00101000000000
.......CACCAATGGGCGACAGCAGCAGCA---G...................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
droEre2
GGAACGTCACCAATGGGCGACAGCAGCAGCA---GGAAGAAGACGACACTGAGGTATAGTTTTGTTCACAGCCTGAT---C------------------------------------------------------AGCCTGA-TCCGCCTGCTCC--GCTGC-CGCCTGTGCTGCT-A----TTTATATA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTTTGGTTCGTTTATACA------------GTTATATATGCCTA----------------TATATA----------------------CATTATATATT---TTAGATTTTACAACTGCTAT--TSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................TATG---------ATTACCTTTGGTTCGTTTATACA------------...............................................................................................2711.0011000000
..................................................GAGGTATAGTTTTGTTCACAGCC.............................................................................................................................................................................................................................................................................................................................................................2311.0010000100
....................................AAGAAGACGACACTGAGGTATAGT..........................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.........................GCAGCA---GGAAGAAGACGACACTGA..................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...............................................................GTTCACAGCCTGAT---C------------------------------------------------------AGCCTG.........................................................................................................................................................................................................................................................................................2111.0011000000
............................................................................................................................................................................................TA-------------------CAT-----------------------------------------------------------ATTACTCTTATG---------ATTACCTT..........................................................................................................................2511.0011000000
.........................GCAGCA---GGAAGAAGACGACACTG...................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000

Generated: 05/17/2015 at 03:59 AM