ID:

dvi_1827

 Coordinate:

scaffold_12726:610900-611050 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-58.6 -58.5 -58.3

Flybase annnotation

exon [dvir_GLEANR_15622:2]; CDS [Dvir\GJ15304-cds]; intron [Dvir\GJ15304-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+
(CAG)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTATCAAATGCCGCGACGTCGACGACGCGCGCCGCGTGCGTGAATGTGCGTTGGTGTGTGTGTGCGCGCGCCCTTGTCTGGGTGCCTGTGTGTCTGTGCATGTGTGCGTGAGTGTGCGGCAAAGTTTTGAACTGGCGGCCAAAGGCGACAGCGCTGCCCCGGCGGCCGCCGCCGCATCAGCAGCAGCAGGTGCAGCTGTAGCGCCAGCAGCGCGTCAACGGCGCAGCCACAAGCCTAACGGCAGTTACAAC
**************************************************..((((((((....)))))))).........((((((((.((.((((..(((((.(((.......(((((...........((((.(((....((((....)))))))))))..)))))))))))))..))))))))))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060657
140_testes_total
 SRR060683
160_testes_total
 V053
head
 M047
female body
 V047
embryo
 SRR060682
9x140_0-2h_embryos_total
 SRR1106730
embryo_16-30h
 SRR060658
140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060689
160x9_testes_total
.....................................................................................................GTGTGCGTGAGTGTGCGGCAAAGT.............................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CCAGCAGCGGGTCAACGGCG............................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................CCTGAGTGTGCGGCACAGGTT............................................................................................................................ 21 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................CGCTCCCCCGGCGTCCGCGGC............................................................................... 21 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................GTCTGTGCATGTGTGCGTG............................................................................................................................................. 19 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................GTGTCTGTGCAGGTGAGCGT.............................................................................................................................................. 20 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GCGGGTCAACGGCGC........................... 15 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0
.............................CGCCGCGTGAGTGAATAAG........................................................................................................................................................................................................... 19 3 7 0.14 1 0 0 0 0 0 1 0 0 0 0
..............................GCCGCGTGAGTGAAGATGC.......................................................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 1 0 0 0 0
......................................................................................TGTGTGTCTGTGCATGTG................................................................................................................................................... 18 0 9 0.11 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................TGTGAGCGTCAGTGTACGGC................................................................................................................................... 20 3 9 0.11 1 0 0 1 0 0 0 0 0 0 0
.................................................GTTGGTGTGTGTGTGCGTGCG..................................................................................................................................................................................... 21 1 11 0.09 1 0 0 0 0 0 0 0 0 1 0
....................................................................................................TGTGTGCGTGAGAATGCGGCTA................................................................................................................................. 22 3 11 0.09 1 0 0 1 0 0 0 0 0 0 0
...................................................TTGTGCGTGTGTGCGCGGGCCC.................................................................................................................................................................................. 22 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..............................GCCGCGTGAGTGAATAAG........................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AATAGTTTACGGCGCTGCAGCTGCTGCGCGCGGCGCACGCACTTACACGCAACCACACACACACGCGCGCGGGAACAGACCCACGGACACACAGACACGTACACACGCACTCACACGCCGTTTCAAAACTTGACCGCCGGTTTCCGCTGTCGCGACGGGGCCGCCGGCGGCGGCGTAGTCGTCGTCGTCCACGTCGACATCGCGGTCGTCGCGCAGTTGCCGCGTCGGTGTTCGGATTGCCGTCAATGTTG
**************************************************..((((((((....)))))))).........((((((((.((.((((..(((((.(((.......(((((...........((((.(((....((((....)))))))))))..)))))))))))))..))))))))))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 V047
embryo
 SRR060659
Argentina_testes_total
 M047
female body
 SRR060669
160x9_females_carcasses_total
 M027
male body		 SRR060676
9xArg_ovaries_total
........................................................................................................ACGCTCTCGCACGCCGTTTCAAA............................................................................................................................ 23 2 1 1.00 1 0 1 0 0 0 0 0
........CCGGGGATGCAGCTGCTGCGC.............................................................................................................................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0 0 0
.........CGGGGTTGCAGCTACTGCGC.............................................................................................................................................................................................................................. 20 3 7 0.43 3 3 0 0 0 0 0 0
........CCGGCGTTGCAGCTACTGCGC.............................................................................................................................................................................................................................. 21 3 4 0.25 1 1 0 0 0 0 0 0
.........CGGTGATGCAGCTACTGCGC.............................................................................................................................................................................................................................. 20 3 9 0.22 2 2 0 0 0 0 0 0
.........CGGTGCTGCAGCTACTGGGC.............................................................................................................................................................................................................................. 20 3 5 0.20 1 1 0 0 0 0 0 0
.........CGGGGATGTAGCTGCTGCGC.............................................................................................................................................................................................................................. 20 3 5 0.20 1 1 0 0 0 0 0 0
.........CCGCGCTGCAACAGCTGCGCG............................................................................................................................................................................................................................. 21 3 5 0.20 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................................CCCGGCGGTGTTCGGATCGC........... 20 3 6 0.17 1 0 0 1 0 0 0 0
.....................................................................................................................................................................GGCGGCGGCGTACTCGTAGT.................................................................. 20 2 8 0.13 1 0 0 0 1 0 0 0
...............TGCGGCTACCGCGCGCGGCG........................................................................................................................................................................................................................ 20 3 11 0.09 1 0 0 0 0 1 0 0
......................................................................................................................................................................................................................................CTCGGATCGCAGTCAATGT.. 19 3 14 0.07 1 0 0 0 0 0 1 0
.........CGGGGTTGCAGCTGCTGCGT.............................................................................................................................................................................................................................. 20 3 19 0.05 1 1 0 0 0 0 0 0
.......................................................................................CGCACAGGCACGTACACACGC............................................................................................................................................... 21 2 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12726:610850-611100 + dvi_1827 TTATCAAAT--------------------------GCCGCGACGTCGAC----GACGC---GCGCCGCGTGCGTGAATGTGCGT------------------------------------------------------------TGGTGTGTGTGTGCG-------------------------------------CGCG---CCC--------------------------------------------------------------------TTGTCTGGGTGCCTG-----TGTGT-------------------CTGTGCATGTGTGCGTGAGTGT--GCGGC---AAAG--TTT--TGAACT----GGCGGCCAAAG------GCGACAG--------CGCTG---CCCC---------------------------------G---------GCGGCCGCCG--------------CCGCATCAGCAGCAGCAGGTGCAGCTGTAGCGCCAGCAGCGCGTCAACGGCGCAGCC-------------------------------------------------------------------------------------------------------------------------------------------------------ACA---AGCCTAACGGCAG-T-------TACA--AC
droMoj3 scaffold_6308:2325486-2325741 + TTATCAAAT--------------------------GCCGCGACGTCGAC----ATCGTTTAGCGCCGCGTGCGTGAGTTTA---------------------------GC---TCTGTGTGTGTGCGCTTGGGTGTGTG---------------------------------------------------------TGT------------------------GTGTGTGTGTTGGTGTGTGCGTGTGTGTGTGAG----------------------------------------------------------AGTC-TGTGCATGTGTGCGTAAGTGA--GCGGC---AAAG--TTT--TGAACT----GGCGGCCAAAG------GCGACAA--------CGCCA---CTGC---------------------------------C---------GCCGCCGCAGCAGC--------------------AGCAGCAGG------TGCAGCGCCAGCAGCGCGTCAACGGCGCAGTCAAAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------TTAACAGCAG-----------------
droGri2 scaffold_14853:4361068-4361317 + TTATCAAAT--------------------------GCCGCGACGTCGAC----GCCGC---GCGCCTCGTGCGTGAGTGTGTGTG---------------------------------------------------------------------------------------------------------------TGT------------------------CTCTCTCTCTCGATCTCTCTCTGTCTCTGTCTCAGT-----------------------CT-------------------------------GTC-TGCA--TGTGTGCGTGAGTGT--GCGGC---AAAG--TTT--TGAACT----GGCGGCCAAAG------GCGACAA--------CGCCG---CCGC---------------------------------C---------GCCGCAGCAGCA--GCAGC------------------------------TGTAGCGCCAGCAGCGCGTCAACGGCGCAGTCAGAGTCTAACAACAGC------------------------------------A--------------------------------------------------------------------------------------------------GCA---GCAGCAGCAGCAG-C-------CGCG--GC
droWil2 scf2_1100000004401:1027349-1027689 + TTATCAAAT-----------------G---CCGCGTCCGCGACGTCGAC----GACGC---GCACTGCGTGCGTGAGTGC----GTGAACAAGCAAACGAGTGTATTAGTGTGTCTGTGTGTGTGTGTTATCGTTCGTA---------------------------------------------------------AGT------------------------GTG--------------TCTCTTTTCCTGTGTGAGTGTGTTGGC-GTGTGTTT----------------------------G-TGCTGTGT--GT-TGTGTGTTGTGGCGTGAGTGT--GTGAATAAAAA-GTTAG--TGAACT----GGCGGCCAAAA------GTGTCGA--------CGTCG---TCGC------------------------------------------------TGCTGCAGGGCGT--------------------------------------------------CAAAGGCGCAGCCAAAGCCTGACAACAACAACAGCATTAGCGCCATCAGCAGCAACAACAAC--------------------------------------------------------------------------------------------AACTGCAGCCACACAAACAACAACAACAG-C-------CACA--TC
dp5 XL_group1e:2713872-2714200 + dps_2643 TTATCAAAT-----------------G---CCGCGACCGCGACGTCGAC----GACAC---ACGCCGCCTGCGTGAGCGTAAGCG----------TACGCGCGTG--------------------TGTGTGTGTGTGTG---TGTGGTGTGTGTGTCAGCGGGAGA----------------------------------------------------------------------------------------------------GATTGCCTCTGTCTGCGTGCCTG-----CGTG---------------------TGTGTGTGTGTGTGTGGGTGG--CCGGGTGAAAA-GTTTT--TGAACT----GGCGGCCAAAG------GTGACGA--------CGACG---CCGC---------------------------------C---------GCCGACGTTGCCGC--------------------------------------------AGCGCCGCGTCAAAGGCGCAGCCAGAGCCTAACGCCAGCCGCAG---TCG---------CAGCAGCAGCAGGAGAA-------------------------------------------------------------------GGACCCGCAGCGGGAAGAGAA-------GTAGCC---GGTGGATCAGTCC-G-------CTCA--AG
droPer2 scaffold_18:1614620-1614880 + TTATCAAAT-----------------G---CCGCGACCGCGACGTCGAC----GACAC---ACGCCGCCTGCGTGAGCGTAAGCG----------TACGCGCGTG--------TGTGTGTGT--------------GTG---TGTGGTGTGTGTGTCAGCGGGAGA----------------------------------------------------------------------------------------------------GATTGCCTCTGTCTGCGTGCTTG-----CGTG---------------------TGTGTGTGTGTGTGTGGGTGG--CCGGGTGAAAA-GTTTT--TGAACT----GGCGGCCAAAG------GTGACGA--------CGACG---CCGC---------------------------------C---------GCCGACGTTGCCGC--------------------------------------------AGCGCCGCGTCAAAGGCGCAGCCAGAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------CTAACGCCAG-C-------CGCA--GC
droAna3 scaffold_12613:212883-213128 - dan_351 C----------------------------------ACCGCGACGTCGAC----GCAGC---GCGCTGCCCGCGTGAGCA------------------------------------------------------------------------------------------GAGCGCTCCTGTGGCTGCGAG------TGTG---TGT---------GTGTGTGGGTGTGTGTGAGG-------------------------TGCTGGCAATGTCCTT----------------------------GTTGCTGCTTAGCT-TGTATGTGTGCGTGTAAGTCG--GCGGCAAAAAA-GTATC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---TCGA---------------------------------C---------GTCGCCGTTGCAGCGCAGT---CGCCGCCG--GCAGGAGC---G---------------------------------------------------------------------------GCAGC--------------------------------------------------------------------------------------------------------------------AGCAGTCGCAG-C-------AGCA--AC
droBip1 scf7180000395457:34479-34749 - C-ACCAAAT-----------------GAAGGCGCCACCGCGACGTCGAC----GCAGT---GCGCTGGCCGCGTGAGCA------------------------------------------------------------------------------------------GAGCGGTCCTGTGGCTGCGTATGTGTGGGA------------------------GTGCGTGTGTGG-------------------------AGCTGGCAATGTCCTT----------------------------GTTGCTGTTTAGCT-TGTATGTGTGCGTGTAAGTCG--GCGGCAATAAA-GTATC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---TCGA---------------------------------C---------GTCGCCGTTGCAGCGCAGT---CGCCGCCG--GCAGGAGC---G---------------------------------------------------------------------------GCAGC-------------------------------------------------------------AGCAGCAGCA-------------------------------------GCA---ACCGCAACAGCAA-C-------CACA--CA
droKik1 scf7180000302344:1167341-1167596 - C-------------------------------GCCGCCGCGACGTCGAC----GCAGC---GCTCAGCCTGCGTGAGTGTGTGTG---------------------------------------------------------------------------------------------------------------TGTG---T-------------------GTGCTTGCGAG---GCTGCG-------------------------------CCGTCTGTGTGCATTACCCAT---------T--------TTGCA-TGTGTGTGTGCATGTGAGTGTTTGCGGC---AAAGTTTTT--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---CCGA---------------------------------C---GCCGACGTCGCCGTTGCAGCGCGTCCAACGCC---A--ACGCCGGC---A---------------------------------------------------------------------------GCAGC-------------------------------------------------------------CGCAGCAGCA-------------------------------------ACA---ATCACAACAACAG-CTACAAGTCTTCATTC
droFic1 scf7180000454050:283546-283771 - C-----------------------------------AGGTGGTGGGACC----GCAGC---A-----------------------------GACGGGCG----------------------------------------ACG------------------------------------------------------ATGGCAGCGGCCA----------------------------------------------------------------------------------------CATGAGC--------------G------C--------CGCC---T---CCTTTGTGG-C-CGCCGTGGCCGCCTC----------GCAGCACCAGCAGCAGCACCA-------------------GCAGATGCCCCACTATGCGGTGTCGGC---------GGTGCACATGCAGAGCCAC---CACCATCA--GCAGCAGC---A---------------------------------------------------------------------------GCAGC---AG-------------------------------------------------------------------GCGGCGGCAGCGGTGGCGGCAGCGCA-------GGCGCA---GCACCACCAGCAG-C-------AGCA--AC
droEle1 scf7180000491277:524468-524674 - GCAAC-----------------------------------AGCAACGGCAGCCGCAGC---AA------------GATGTGGACA---------------------------------------------------------TGCGTC---------------------AAATGTTCCTATGCCTACA-------------------------------------------------------------------------------ACCGTCTCTGGCTGCAGACCTG-----CGAG---------------------------A---T------GTGC--GAGGC---CA-----------AGCC------------GGAGCAGCAGCAACAG--------CAACT---CCA--------GCA----------------------------------GCAGC--AGCAGC-----------AGCACCATCTGCAGCAGCTGCAGCTGCAGCAGCA-----------GCAGCACC-------------------------------------------------------A--------------------------------------------------------------------------------------------------TCT---GCAGCAGCTGCAG-C-------TGCA--GC
droRho1 scf7180000779337:380354-380528 + -----------------------------------GCCGCGACGTCGAC----GCAGC---GCTCTGCCTGCGTGAGTGTGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCCAAGTAACTAATGTGT-------------------------------------------------------------------------------------------------G------TGTTCGTGTGAGC------------------ATC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---CCGA---------------------------------C---------GTCGCCGTTGCAGCGCGTCCAACGCCGCCG--GCAGCA---------------------------------------------------------------------------------GCAGC--------------------------------------------------------------------------------------------------------------------AGCAGCAACAA-C-------TACA--AC
droBia1 scf7180000302126:2026462-2026670 - -----------------------------------GCCGCGACGTCGAC----GCAGC---GCTCTGCCTGCGTGATTGTGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCTA--GTACCTATGTGT-------------------------------------------------------------------------------------------------G------TGTGCGTGTGAGC------------------TTC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---CCGA---------------------------------C---------GTCGTCGTTGCAGCGCGTCCAACGCCGCCG--GCAGCAGC---A---------------------------------------------------------------------------GCAACAAC------AAC----------------------------AACAGCTCC---------------------------------------ACACAACACC-------ACAACA---ACAACCACTGCAG-C-------ACCC--AC
droTak1 scf7180000415394:143229-143455 - TCAGCAACA-----------------G------------------CA--------------------------------------------GGCGGGCG----------------------------------------ACG------------------------------------------------------ATGGCAGTGGCCA----------------------------------------------------------------------------------------CATGAGT--------------G------C--------CGCC---T---CCTTTGTGG-C-CGCCGTGGCCGCCTC----------GCAGCATCAGCAGCAGCACCA-------------------GCAGATGCCCCACTACGCGGTGTCGGC---------GGTGCACATGCAGCAGAGCCACCACCACCA--GCAGCA---------------------------------------------------------------------------------GCAGC-------------------------------------------------------------AGCAGCAGCAGGCGGCGGCAGCGGTGGCGGCAGCGCA-------GGCGCA---GCACCACCAGCAG-C-------AGCA--GG
droEug1 scf7180000408825:63303-63524 - TAAAACTTTTCATAAAATTCTAGAATG---CCACCGCCGCGACGTCGAC----GCAGC---ACTCTGCTTGCGTGATTGGGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCTAGAGTACCTATGTGT-------------------------------------------------------------------------------------------------G------TGTGCGTGTGAGC------------------TTC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---CCGA---------------------------------C---------GTCGCCGTTGCAGCGCGTCCAACGCCGCCG--GTAGCA---------------------------------------------------------------------------------GCAACAACAACACCG--------------------------------------------------------------------------------------------------CCA---CCAACAGCTGCAA-G-------AGCT--AC
dm3 chrX:7936630-7936869 - ACAACAATG-----------------G---C------------TTCAAT----GTGGC----CGATTTCGGCATGGCTGGATTCG---------------------------------------------------------------------------------------------------------------ATGG---TTTAAA----------------------------------------------------------------------------------------TATGACA--------------G------C--------TGCA---T---CATTCC----T-CGATCTGGAGCCCTC----------GCTTCAGCAGCAGCAGATGCA-------------------GCAGA---------------------------------TGCAATTGCAGCAGCAA---CACCATCA--GCAGCAGC---A---------------------------------------------------------------------------ACAGC---AG-------ACGCACCAGCAACAGCAGCAACATCAGCAGCAACACCACCAACAGCAGCAGCAGCAGCA-------------------------------------ACT---AACCCAGCAGCAG-C-------TGCA--GC
droSim2 2r:15414734-15414985 + TTCTCAAGT-----------------T---CTGCC--AGAGATTT-----------------------TTGAGCAAATTCA---------------------------AA---TC------------------------------GCTGAATTTGATGACAGGAGAAATGAATGCCAGTGTGGCCGA----------------------ATGCGTGTGTGA-------------------------------------------------------------------------------------------------G------TGTGAGTGTGGCTGCCT---TCTAAACAG-C-CTTGAAAGCTGGCTGGCAGCCTCTG------TCAACCG--------AATAG---TTGC---------------------------------T---------GCTGCAACAGCA--ACATCTAGCG--------GCAGCAGC---AGCAGCCGAAGCAGCAGCAGC--AACAACTG-GCAACAAAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGCAGCAAGT-------CACA--AC
droSec2 scaffold_10:2892088-2892260 + -----------------------------------GCCGCGACGTCGAC----GCAG------------TGCGTGATTGTGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCTA--GTACTCATGTGT-------------------------------------------------------------------------------------------------G------T---CGTGTGAGC------------------TTC--TGAACT----GGCGACCAAAA------CTGACGA--------CGCCG---TCGCTGCCTCTGCC------------------------TCAGC-----------------CGCAGT---CGCCGCCTCCGCAGCAGC---A---------------------------------------------------------------------------GCAGCAGC------A--------------------------------------------------------------------------------------------------GCA---GCAGTAACAACAA-C-------TACA--AC
droYak3 X:5197925-5198136 - -----------------------------------GCCGCGACGTCGAC----GCAGC---GCTCTGCCTGCGTGATTGTGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCTA--ATACCCATGTGT-------------------------------------------------------------------------------------------------G------TGTCCGTGTGAGCTT--CTG--------A--TTC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGCCG---TCGCTGCCTCTGCC------------------------TCAGC-----------------CGCAGT---CGCCGCCTCCGCAGCAAC---A---------------------------------------------------------------------------ACAACAAC------AAC----------------------------AACAACATC---------------------------------------GAGCAGAGCC----------ACA---ACAACCACACCAA-T-------TGCA--AC
droEre2 scaffold_4690:595066-595271 + -----------------------------------GCCGCGACGTCGAC----GCAGC---GCTCTGCCTGCGTGATTGTGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCTA--GTACTCATGTGT-------------------------------------------------------------------------------------------------G------T---TGTGTGAGC------------------TTC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACGCCGTCGCTGCCTCTGCC------------------------TCAGC-----------------CGCAGT---CGCCGCCTCCGCAGCAGC---A---------------------------------------------------------------------------GCAGCAAC------AGC----------------------------AGCA----C---------------------------------------ACACAAC---AACAGCA---GCA---AACTCAACAAACA-C-------TACA--AC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTATCAAAT--------------------------GCCGCGACGTCGAC----GACGC---GCGCCGCGTGCGTGAATGTGCGT------------------------------------------------------------TGGTGTGTGTGTGCG-------------------------------------CGCG---CCC--------------------------------------------------------------------TTGTCTGGGTGCCTG-----TGTGT-------------------CTGTGCATGTGTGCGTGAGTGT--GCGGC---AAAG--TTT--TGAACT----GGCGGCCAAAG------GCGACAG--------CGCTG---CCCC---------------------------------G---------GCGGCCGCCG--------------CCGCATCAGCAGCAGCAGGTGCAGCTGTAGCGCCAGCAGCGCGTCAACGGCGCAGCC-------------------------------------------------------------------------------------------------------------------------------------------------------ACA---AGCCTAACGGCAG-T-------TACA--ACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................GTGTGCGTGAGTGT--GCGGC---AAAG--T.................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GT-------------------CTGTGCATGTGTGCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................1940.251001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TG-----TGTGT-------------------CTGTGCATGTG.............................................................................................................................................................................................................................................................................................................................................................................................................1890.111000000001000000000000000000000000000000000000000000000000000000
droMoj3
TTATCAAAT--------------------------GCCGCGACGTCGAC----ATCGTTTAGCGCCGCGTGCGTGAGTTTA---------------------------GC---TCTGTGTGTGTGCGCTTGGGTGTGTG---------------------------------------------------------TGT------------------------GTGTGTGTGTTGGTGTGTGCGTGTGTGTGTGAG----------------------------------------------------------AGTC-TGTGCATGTGTGCGTAAGTGA--GCGGC---AAAG--TTT--TGAACT----GGCGGCCAAAG------GCGACAA--------CGCCA---CTGC---------------------------------C---------GCCGCCGCAGCAGC--------------------AGCAGCAGG------TGCAGCGCCAGCAGCGCGTCAACGGCGCAGTCAAAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------TTAACAGCAG-----------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................GTGTGAG----------------------------------------------------------AGTC-TGTGCATGTGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................TGC---------------------------------C---------GCCGCCGCAGCAGC--------------------AGC.......................................................................................................................................................................................................................................2160.171100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCAGC--------------------AGCAGCAGG------...........................................................................................................................................................................................................................18200.051100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC--------------------AGCAGCAGG------TGCAGC.....................................................................................................................................................................................................................21200.051001000
droGri2
TTATCAAAT--------------------------GCCGCGACGTCGAC----GCCGC---GCGCCTCGTGCGTGAGTGTGTGTG---------------------------------------------------------------------------------------------------------------TGT------------------------CTCTCTCTCTCGATCTCTCTCTGTCTCTGTCTCAGT-----------------------CT-------------------------------GTC-TGCA--TGTGTGCGTGAGTGT--GCGGC---AAAG--TTT--TGAACT----GGCGGCCAAAG------GCGACAA--------CGCCG---CCGC---------------------------------C---------GCCGCAGCAGCA--GCAGC------------------------------TGTAGCGCCAGCAGCGCGTCAACGGCGCAGTCAGAGTCTAACAACAGC------------------------------------A--------------------------------------------------------------------------------------------------GCA---GCAGCAGCAGCAG-C-------CGCG--GCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TTATCAAAT-----------------G---CCGCGTCCGCGACGTCGAC----GACGC---GCACTGCGTGCGTGAGTGC----GTGAACAAGCAAACGAGTGTATTAGTGTGTCTGTGTGTGTGTGTTATCGTTCGTA---------------------------------------------------------AGT------------------------GTG--------------TCTCTTTTCCTGTGTGAGTGTGTTGGC-GTGTGTTT----------------------------G-TGCTGTGT--GT-TGTGTGTTGTGGCGTGAGTGT--GTGAATAAAAA-GTTAG--TGAACT----GGCGGCCAAAA------GTGTCGA--------CGTCG---TCGC------------------------------------------------TGCTGCAGGGCGT--------------------------------------------------CAAAGGCGCAGCCAAAGCCTGACAACAACAACAGCATTAGCGCCATCAGCAGCAACAACAAC--------------------------------------------------------------------------------------------AACTGCAGCCACACAAACAACAACAACAG-C-------CACA--TCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................CGTCG---TCGC------------------------------------------------TGCTGCAGGGCGT--------------------------------------------------C.......................................................................................................................................................................................................2313.00330000
....................................................................................................GTGTATTAGTGTGTCTGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200
....................................................................................................................................................................................................................................................................................................................................GTTGTGGCGTGAGTGT--GTGA............................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................CAAAA------GTGTCGA--------CGTCG---TCGC------------------------------------------------TGCT...................................................................................................................................................................................................................................................................2511.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGCCTGACAACAACAACAGC.....................................................................................................................................................................2311.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAACAAC--------------------------------------------------------------------------------------------AACT..........................................20200.05101000
dp5
TTATCAAAT-----------------G---CCGCGACCGCGACGTCGAC----GACAC---ACGCCGCCTGCGTGAGCGTAAGCG----------TACGCGCGTG--------------------TGTGTGTGTGTGTG---TGTGGTGTGTGTGTCAGCGGGAGA----------------------------------------------------------------------------------------------------GATTGCCTCTGTCTGCGTGCCTG-----CGTG---------------------TGTGTGTGTGTGTGTGGGTGG--CCGGGTGAAAA-GTTTT--TGAACT----GGCGGCCAAAG------GTGACGA--------CGACG---CCGC---------------------------------C---------GCCGACGTTGCCGC--------------------------------------------AGCGCCGCGTCAAAGGCGCAGCCAGAGCCTAACGCCAGCCGCAG---TCG---------CAGCAGCAGCAGGAGAA-------------------------------------------------------------------GGACCCGCAGCGGGAAGAGAA-------GTAGCC---GGTGGATCAGTCC-G-------CTCA--AGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA-------------------------------------------------------------------GGACCCGCAGCGGGAAGAGA...............................................2311.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................TTTT--TGAACT----GGCGGCCAAAG------GTGAA.............................................................................................................................................................................................................................................................................................................................................2611.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CGC---------------------------------C---------GCCGACGTTGCCGC--------------------------------------------AG................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................CGTG--------------------TGTGTGTGTGTGTG---TGTGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.1010000010000
.............................................................................................................................................................................................................................................................................................CCTG-----CGTG---------------------TGTGTGTGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................20120.0810000001000
droPer2
TTATCAAAT-----------------G---CCGCGACCGCGACGTCGAC----GACAC---ACGCCGCCTGCGTGAGCGTAAGCG----------TACGCGCGTG--------TGTGTGTGT--------------GTG---TGTGGTGTGTGTGTCAGCGGGAGA----------------------------------------------------------------------------------------------------GATTGCCTCTGTCTGCGTGCTTG-----CGTG---------------------TGTGTGTGTGTGTGTGGGTGG--CCGGGTGAAAA-GTTTT--TGAACT----GGCGGCCAAAG------GTGACGA--------CGACG---CCGC---------------------------------C---------GCCGACGTTGCCGC--------------------------------------------AGCGCCGCGTCAAAGGCGCAGCCAGAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------CTAACGCCAG-C-------CGCA--GCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................GCGTG--------TGTGTGTGT--------------GTG---TGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
droAna3
C----------------------------------ACCGCGACGTCGAC----GCAGC---GCGCTGCCCGCGTGAGCA------------------------------------------------------------------------------------------GAGCGCTCCTGTGGCTGCGAG------TGTG---TGT---------GTGTGTGGGTGTGTGTGAGG-------------------------TGCTGGCAATGTCCTT----------------------------GTTGCTGCTTAGCT-TGTATGTGTGCGTGTAAGTCG--GCGGCAAAAAA-GTATC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---TCGA---------------------------------C---------GTCGCCGTTGCAGCGCAGT---CGCCGCCG--GCAGGAGC---G---------------------------------------------------------------------------GCAGC--------------------------------------------------------------------------------------------------------------------AGCAGTCGCAG-C-------AGCA--ACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................GTGTGCGTGTAAGTCG--GC..............................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
........................................................................................................................................................................................................................................................................................................................................................GGCAAAAAA-GTATC--TGAACT----GGC................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........................................................................................................................................................................................................................TGTGGGTGTGTGTGAGG-------------------------TG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCGCAGT---CGCCGCC...............................................................................................................................................................................................................................................2011.001010000
...........................................................................................................................................................................................GAG------TGTG---TGT---------GTGTGTGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.142000002
....................................................................................................................................................................................................TGTG---TGT---------GTGTGTGGGTGTGTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24170.061100000
droBip1
C-ACCAAAT-----------------GAAGGCGCCACCGCGACGTCGAC----GCAGT---GCGCTGGCCGCGTGAGCA------------------------------------------------------------------------------------------GAGCGGTCCTGTGGCTGCGTATGTGTGGGA------------------------GTGCGTGTGTGG-------------------------AGCTGGCAATGTCCTT----------------------------GTTGCTGTTTAGCT-TGTATGTGTGCGTGTAAGTCG--GCGGCAATAAA-GTATC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---TCGA---------------------------------C---------GTCGCCGTTGCAGCGCAGT---CGCCGCCG--GCAGGAGC---G---------------------------------------------------------------------------GCAGC-------------------------------------------------------------AGCAGCAGCA-------------------------------------GCA---ACCGCAACAGCAA-C-------CACA--CASizeHit CountTotal NormTotal
No Reads
droKik1
C-------------------------------GCCGCCGCGACGTCGAC----GCAGC---GCTCAGCCTGCGTGAGTGTGTGTG---------------------------------------------------------------------------------------------------------------TGTG---T-------------------GTGCTTGCGAG---GCTGCG-------------------------------CCGTCTGTGTGCATTACCCAT---------T--------TTGCA-TGTGTGTGTGCATGTGAGTGTTTGCGGC---AAAGTTTTT--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---CCGA---------------------------------C---GCCGACGTCGCCGTTGCAGCGCGTCCAACGCC---A--ACGCCGGC---A---------------------------------------------------------------------------GCAGC-------------------------------------------------------------CGCAGCAGCA-------------------------------------ACA---ATCACAACAACAG-CTACAAGTCTTCATTCSizeHit CountTotal NormTotal
No Reads
droFic1
C-----------------------------------AGGTGGTGGGACC----GCAGC---A-----------------------------GACGGGCG----------------------------------------ACG------------------------------------------------------ATGGCAGCGGCCA----------------------------------------------------------------------------------------CATGAGC--------------G------C--------CGCC---T---CCTTTGTGG-C-CGCCGTGGCCGCCTC----------GCAGCACCAGCAGCAGCACCA-------------------GCAGATGCCCCACTATGCGGTGTCGGC---------GGTGCACATGCAGAGCCAC---CACCATCA--GCAGCAGC---A---------------------------------------------------------------------------GCAGC---AG-------------------------------------------------------------------GCGGCGGCAGCGGTGGCGGCAGCGCA-------GGCGCA---GCACCACCAGCAG-C-------AGCA--ACSizeHit CountTotal NormTotal
No Reads
droEle1
GCAAC-----------------------------------AGCAACGGCAGCCGCAGC---AA------------GATGTGGACA---------------------------------------------------------TGCGTC---------------------AAATGTTCCTATGCCTACA-------------------------------------------------------------------------------ACCGTCTCTGGCTGCAGACCTG-----CGAG---------------------------A---T------GTGC--GAGGC---CA-----------AGCC------------GGAGCAGCAGCAACAG--------CAACT---CCA--------GCA----------------------------------GCAGC--AGCAGC-----------AGCACCATCTGCAGCAGCTGCAGCTGCAGCAGCA-----------GCAGCACC-------------------------------------------------------A--------------------------------------------------------------------------------------------------TCT---GCAGCAGCTGCAG-C-------TGCA--GCSizeHit CountTotal NormTotal
No Reads
droRho1
-----------------------------------GCCGCGACGTCGAC----GCAGC---GCTCTGCCTGCGTGAGTGTGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCCAAGTAACTAATGTGT-------------------------------------------------------------------------------------------------G------TGTTCGTGTGAGC------------------ATC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---CCGA---------------------------------C---------GTCGCCGTTGCAGCGCGTCCAACGCCGCCG--GCAGCA---------------------------------------------------------------------------------GCAGC--------------------------------------------------------------------------------------------------------------------AGCAGCAACAA-C-------TACA--ACSizeHit CountTotal NormTotal
No Reads
droBia1
-----------------------------------GCCGCGACGTCGAC----GCAGC---GCTCTGCCTGCGTGATTGTGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCTA--GTACCTATGTGT-------------------------------------------------------------------------------------------------G------TGTGCGTGTGAGC------------------TTC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---CCGA---------------------------------C---------GTCGTCGTTGCAGCGCGTCCAACGCCGCCG--GCAGCAGC---A---------------------------------------------------------------------------GCAACAAC------AAC----------------------------AACAGCTCC---------------------------------------ACACAACACC-------ACAACA---ACAACCACTGCAG-C-------ACCC--ACSizeHit CountTotal NormTotal
No Reads
droTak1
TCAGCAACA-----------------G------------------CA--------------------------------------------GGCGGGCG----------------------------------------ACG------------------------------------------------------ATGGCAGTGGCCA----------------------------------------------------------------------------------------CATGAGT--------------G------C--------CGCC---T---CCTTTGTGG-C-CGCCGTGGCCGCCTC----------GCAGCATCAGCAGCAGCACCA-------------------GCAGATGCCCCACTACGCGGTGTCGGC---------GGTGCACATGCAGCAGAGCCACCACCACCA--GCAGCA---------------------------------------------------------------------------------GCAGC-------------------------------------------------------------AGCAGCAGCAGGCGGCGGCAGCGGTGGCGGCAGCGCA-------GGCGCA---GCACCACCAGCAG-C-------AGCA--GGSizeHit CountTotal NormTotal
No Reads
droEug1
TAAAACTTTTCATAAAATTCTAGAATG---CCACCGCCGCGACGTCGAC----GCAGC---ACTCTGCTTGCGTGATTGGGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCTAGAGTACCTATGTGT-------------------------------------------------------------------------------------------------G------TGTGCGTGTGAGC------------------TTC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACG---CCGA---------------------------------C---------GTCGCCGTTGCAGCGCGTCCAACGCCGCCG--GTAGCA---------------------------------------------------------------------------------GCAACAACAACACCG--------------------------------------------------------------------------------------------------CCA---CCAACAGCTGCAA-G-------AGCT--ACSizeHit CountTotal NormTotal
No Reads
dm3
ACAACAATG-----------------G---C------------TTCAAT----GTGGC----CGATTTCGGCATGGCTGGATTCG---------------------------------------------------------------------------------------------------------------ATGG---TTTAAA----------------------------------------------------------------------------------------TATGACA--------------G------C--------TGCA---T---CATTCC----T-CGATCTGGAGCCCTC----------GCTTCAGCAGCAGCAGATGCA-------------------GCAGA---------------------------------TGCAATTGCAGCAGCAA---CACCATCA--GCAGCAGC---A---------------------------------------------------------------------------ACAGC---AG-------ACGCACCAGCAACAGCAGCAACATCAGCAGCAACACCACCAACAGCAGCAGCAGCAGCA-------------------------------------ACT---AACCCAGCAGCAG-C-------TGCA--GCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................GCA---T---CATTCC----T-CGATCTGGAGCC.....................................................................................................................................................................................................................................................................................................................................................................23112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GTGGC----CGATTTCGGCATGGCTGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
...........................................................................................................................................................................................................................................................................................................................................................TTCC----T-CGATCTGGAGCCCTC----------GCTTC...................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000
.................................................................TTTCGGCATGGCTGGATTCG---------------------------------------------------------------------------------------------------------------ATGG---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................GATTTCGGCATGGCTGGATTCG---------------------------------------------------------------------------------------------------------------AT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
...........................................................................................................................................................................................................................................................................................................................................................TTCC----T-CGATCTGGAGCCCTC----------GCTTCA..................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......TG-----------------G---C------------TTCAAT----GTGGC----CGATTTCGGCATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TTTCGGCATGGCTGGATTCG---------------------------------------------------------------------------------------------------------------ATGG---TT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACATCAGCAGCAACACCAC.............................................................................................2414.0040000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TGCA-------------------GCAGA---------------------------------TGCAATTGCAGCAGCAA---A.....................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGATGCA-------------------GCAGA---------------------------------TGCAATTG..................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA-------------------------------------ACT---AACCCAGCAGCAG-C-------........2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CATTCC----T-CGATCTGGAGCCCTC----------GCTTC...................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATTCC----T-CGATCTGGAGCCCTC----------GCTTC...................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------TGCAATTGCAGCAGCAA---CACCATCA--G...........................................................................................................................................................................................................................................2712.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACATCAGCAGCAACACCACCAA..........................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TCC----T-CGATCTGGAGCCCTC----------GCTTC...................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GATCTGGAGCCCTC----------GCTTCAGCAGCAG...........................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CGATTTCGGCATGGCTGGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGATGCA-------------------GCAGA---------------------------------..........................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................T---CATTCC----T-CGATCTGGAGCCC....................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TC----------GCTTCAGCAGCAGCAGATGCA-------------------GCAGA---------------------------------..........................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................T---CATTCC----T-CGATCTGGAGCCCTC----------GCTTC...................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CACCATCA--GCAGCAGC---A---------------------------------------------------------------------------ACAGC---.............................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA-------------------------------------ACT---AACCCAGCAGCAG-................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................ATGGCTGGATTCG---------------------------------------------------------------------------------------------------------------ATGG---TT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................................GCATGGCTGGATTCG---------------------------------------------------------------------------------------------------------------ATGG---TTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................C----CGATTTCGGCATGGCTGGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
.......TG-----------------G---C------------TTCAAT----GTGGC----CGATTTCGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CG---------------------------------------------------------------------------------------------------------------ATGG---TTTAAA----------------------------------------------------------------------------------------TATGACA--------------G------C--------A.......................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CC----T-CGATCTGGAGCCCTC----------GCTTCAGC................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GCTGGATTCG---------------------------------------------------------------------------------------------------------------ATGG---TTTAAA----------------------------------------------------------------------------------------TATGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GATTTCGGCATGGCTGGATTCG---------------------------------------------------------------------------------------------------------------ATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATTCC----T-CGATCTGGAGCCCTC----------GCTTCAGC................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GCTTCAGCAGCAGCAGATGCA-------------------GCAGA---------------------------------..........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................ACA--------------G------C--------TGCA---T---CATTCC----T-CG...............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA--GCAGCAGC---A---------------------------------------------------------------------------ACAGC---AG-------ACGCACCAG...........................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGCA-------------------GCAGA---------------------------------TGCAAT....................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................CTGGATTCG---------------------------------------------------------------------------------------------------------------ATGG---TTTAAA----------------------------------------------------------------------------------------GG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TCC----T-CGATCTGGAGCCCTC----------GCTTCAAA................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................GCATGGCTGGATTCG---------------------------------------------------------------------------------------------------------------ATGG---TT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................TCC----T-CGATCTGGAGCCCTC----------GCTTCA..................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................T----GTGGC----CGATTTCGGCATGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATTCC----T-CGATCTGGAGCCCTC----------GC......................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CGGCATGGCTGGATTCG---------------------------------------------------------------------------------------------------------------ATGG---G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TAAA----------------------------------------------------------------------------------------TATGACA--------------G------C--------TGCA---T---CATTCC----T-CGA..............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TTCAAT----GTGGC----CGATTTCGGCATGGCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................T---CATTCC----T-CGATCTGGAGCCCTC----------GCT.....................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TCC----T-CGATCTGGAGCCCTC----------GCTAA...................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
TTCTCAAGT-----------------T---CTGCC--AGAGATTT-----------------------TTGAGCAAATTCA---------------------------AA---TC------------------------------GCTGAATTTGATGACAGGAGAAATGAATGCCAGTGTGGCCGA----------------------ATGCGTGTGTGA-------------------------------------------------------------------------------------------------G------TGTGAGTGTGGCTGCCT---TCTAAACAG-C-CTTGAAAGCTGGCTGGCAGCCTCTG------TCAACCG--------AATAG---TTGC---------------------------------T---------GCTGCAACAGCA--ACATCTAGCG--------GCAGCAGC---AGCAGCCGAAGCAGCAGCAGC--AACAACTG-GCAACAAAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGCAGCAAGT-------CACA--ACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
-----------------------------------GCCGCGACGTCGAC----GCAG------------TGCGTGATTGTGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCTA--GTACTCATGTGT-------------------------------------------------------------------------------------------------G------T---CGTGTGAGC------------------TTC--TGAACT----GGCGACCAAAA------CTGACGA--------CGCCG---TCGCTGCCTCTGCC------------------------TCAGC-----------------CGCAGT---CGCCGCCTCCGCAGCAGC---A---------------------------------------------------------------------------GCAGCAGC------A--------------------------------------------------------------------------------------------------GCA---GCAGTAACAACAA-C-------TACA--ACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
-----------------------------------GCCGCGACGTCGAC----GCAGC---GCTCTGCCTGCGTGATTGTGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCTA--ATACCCATGTGT-------------------------------------------------------------------------------------------------G------TGTCCGTGTGAGCTT--CTG--------A--TTC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGCCG---TCGCTGCCTCTGCC------------------------TCAGC-----------------CGCAGT---CGCCGCCTCCGCAGCAAC---A---------------------------------------------------------------------------ACAACAAC------AAC----------------------------AACAACATC---------------------------------------GAGCAGAGCC----------ACA---ACAACCACACCAA-T-------TGCA--ACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
-----------------------------------GCCGCGACGTCGAC----GCAGC---GCTCTGCCTGCGTGATTGTGTGCG---------------------------------------------------------------------------------------------------------------TGCG---CCTA--GTACTCATGTGT-------------------------------------------------------------------------------------------------G------T---TGTGTGAGC------------------TTC--TGAACT----GGCGGCCAAAA------GTGACGA--------CGACGCCGTCGCTGCCTCTGCC------------------------TCAGC-----------------CGCAGT---CGCCGCCTCCGCAGCAGC---A---------------------------------------------------------------------------GCAGCAAC------AGC----------------------------AGCA----C---------------------------------------ACACAAC---AACAGCA---GCA---AACTCAACAAACA-C-------TACA--ACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................TGTGT-------------------------------------------------------------------------------------------------G------T---TGTGTGAGC------------------TTC--.............................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................TGAACT----GGCGGCCAAAA------GTGACGA--------CGA................................................................................................................................................................................................................................................................................................................................2711.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTCCGCAGCAGC---A---------------------------------------------------------------------------GCAGCAAC------AG.....................................................................................................................................2620.5011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTCCGCAGCAGC---A---------------------------------------------------------------------------GCAGCAAC------A......................................................................................................................................2520.5011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------CGCAGT---CGCCGCCTCCGCAGC.......................................................................................................................................................................................................................................2220.5010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---A---------------------------------------------------------------------------GCAGCAAC------AGC----------------------------AGCA----C---------------------------------------........................................................19190.0511000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC---A---------------------------------------------------------------------------GCAGCAAC------AGC----------------------------AGC.....................................................................................................23200.0510100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---A---------------------------------------------------------------------------GCAGCAAC------AGC----------------------------AGC.....................................................................................................19200.0510000010

Generated: 05/16/2015 at 11:00 PM