ID:

dvi_18220

 Coordinate:

scaffold_13049:3702871-3703134 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.3 -39.2 -39.0

Flybase annnotation

exon [dvir_GLEANR_12420:5]; CDS [Dvir\GJ12453-cds]; exon [dvir_GLEANR_12420:6]; CDS [Dvir\GJ12453-cds]; intron [Dvir\GJ12453-in]

Repeatable elements

NameClassFamilyStrand
(CAT)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACGGTGATGTCGAATTCGAGGTGTGGGATGATGATGATGATGATGATGATGATGACGTCGATGATATCGATGATGATTACGATGGCGACAATGACGACAATGATGACGACAATGGCATTGAGCTTTGATTTCAATTGGCGTCTGCATCGCCGTCGCTCATGGAATGCCAGCGCAACCAATGTGATAGTCTCGCAATCATCAGTAGTGATAGCAATAATGATCCACGTGCTGCACGTCTCTCCTTCTTCGCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAGACAGCTAAATGCCACAGCCAC
*****************************************************************************************************..((((.((..(((((((...))))))))).))))(((((((((....((((.((((..(((...(((.(((.....))))))...))))))).))))....)))))))))..(((((..(((....))).)).)))........********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060676
9xArg_ovaries_total
 SRR1106730
embryo_16-30h
 SRR060681
Argx9_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060674
9x140_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060679
140x9_testes_total
 M028
head
 SRR060655
9x160_testes_total
 V116
male body		 SRR060657
140_testes_total
 SRR060683
160_testes_total
 SRR060656
9x160_ovaries_total
 SRR060658
140_ovaries_total
 V047
embryo
 SRR060665
9_females_carcasses_total
 SRR060654
160x9_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR1106713
embryo_0-2h
 SRR1106719
embryo_8-10h
 SRR1106721
embryo_10-12h
 SRR1106726
embryo_14-16h
 M027
male body		 SRR060684
140x9_0-2h_embryos_total
 GSM1528803
follicle cells		 V053
head
 SRR060678
9x140_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060664
9_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060663
160_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 M047
female body
 SRR060668
160x9_males_carcasses_total
 M061
embryo
 SRR060675
140x9_ovaries_total
 SRR1106720
embryo_8-10h
.....................................................................................................GATGATGATGACGTCGATGATATCGA............................................................................................................................................................................................................................................. 26 0 1 4.00 4 1 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GATGATGATGACGTCGATGATATCG.............................................................................................................................................................................................................................................. 25 0 1 3.00 3 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GATGATGATGACGTCGATGATATCGAA............................................................................................................................................................................................................................................ 27 1 1 3.00 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GATGATGATGACGTCGATGA................................................................................................................................................................................................................................................... 20 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GATGATGATTACGATGGCGACAATGACGACAATGATGACGACAA................................................................................................................................................................................................... 44 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................TACGAAGACGACAATGACGACC................................................................................................................................................................................................................ 22 3 9 1.11 10 0 0 0 0 0 0 0 0 6 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................TCGTCCATCACCGAAGCTGTCGAGAGAC................... 28 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TCAAGAGCATACACCATGCGC........................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GATGATGACGTCGATGATATCGATGA.......................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GATGATGATGACGTCGCTGATATCCAA............................................................................................................................................................................................................................................ 27 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GAATGCCAGCGCAACCAATGTGATAGTC...................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GATGAGGATGACGTCGATGGTATCG.............................................................................................................................................................................................................................................. 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GATGATGATGATGACGTCGATGATATCGATGATGAT...................................................................................................................................................................................................................................... 36 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................GACAATGATGACGACAATGGCATTGAGCTT...................................................................................................................................................................................... 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GATGATGATGACGTCGATGATA................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GATGATGATGATGACGTCGATGATATCGATG........................................................................................................................................................................................................................................... 31 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................GATGATGATGATGATGACGTCGA...................................................................................................................................................................................................................................................... 23 0 2 1.00 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GATGATGATGACGTCGATGATATCGAT............................................................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................CGTCTCTCCTTCTTCGCTCCGCAG.................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GATGACGACAATGGCATTGAGCTT...................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................GATGATGATGATGATGACGTCGATGATATCGAA............................................................................................................................................................................................................................................ 33 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GATGACGACAATGGCATTGAGCTTT..................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GATGATGATGACGTCGATGATATCGATG........................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GATGATGATGACGTCGATGATAA................................................................................................................................................................................................................................................ 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CGGCGATGGCATTGGGCTTTGAT.................................................................................................................................................................................. 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GATGATGATGACGTCGATGATAT................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................ATGATGATGATGACGTCGA...................................................................................................................................................................................................................................................... 19 0 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................GATGATGATGATGATGACGTCG....................................................................................................................................................................................................................................................... 22 0 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGATGATGATGATGATGATGA.................................................................................................................................................................................................................................................................. 21 0 20 0.55 11 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................AGGTGGGAGACTGTGATATC........................................................................................................................................................................................................................................................................................................ 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................AATGATGACGTCGATGATATC............................................................................................................................................................................................................................................... 21 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GATGATGATGATGACGTCGCTGA................................................................................................................................................................................................................................................... 23 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TGATGATGATGATGATGATG............................................................................................................................................................................................................................................................. 20 0 20 0.45 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 4 0 0 0 0 0 0 0
..............................................................................TGTGTGATGATGATGATGATGATGA..................................................................................................................................................................................................................................................................... 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GATGAAATCGATGATGACTA.................................................................................................................................................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TGTGTGATGATGATGATGATGATGATG................................................................................................................................................................................................................................................................... 27 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................GTATCAGTTGGGTGACGGGGA............................................................................................................................................................................................................................................................................................................ 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GCGTCTGCCTCGCCGTCGCA...................................................................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................GTCTGGGATGATGATCAT............................................................................................................................................................................................................................................................................. 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTACGAAGACGACAATGAC.................................................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TGATGATGATGATGATGATGA............................................................................................................................................................................................................................................................ 21 0 20 0.25 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGATGATGATGATGATGAT.................................................................................................................................................................................................................................................................... 19 0 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................CGGCAATGATATCGATGAAGA....................................................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................GTGTTGGATGATGACGATCAT.......................................................................................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................TGATGATGATGATGATGA............................................................................................................................................................................................................................................................... 18 0 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGATGATGATGATGATGATG................................................................................................................................................................................................................................................................... 20 0 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................GCGACATCGATGACGACAATGGC............................................................................................................................................................................................... 23 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TAGTCTCGAATTCATCGGTA....................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CATCGACGTCGCTCATGC................................................................................................................................................. 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................CTTCTTCGGTCCGGAGGA................................................ 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................ATGTGTGATGATGATGATGATGATGA..................................................................................................................................................................................................................................................................... 26 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GATAGCGCCAATGACGCCAAT.............................................................................................................................................................................................................. 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GATGATGATGATGATGAT................................................................................................................................................................................................................................................................. 18 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTTACGAAGACGACAATGACG................................................................................................................................................................................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTTACGAAGACGACAATGACGA.................................................................................................................................................................................................................. 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TGGGATGTAGATGATGATGGTG...................................................................................................................................................................................................................................................................... 22 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GATGATGATGATGATGATGATGAT.............................................................................................................................................................................................................................................................. 24 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0
...............................................................................................GATGATGATGATGATGACG.......................................................................................................................................................................................................................................................... 19 0 20 0.10 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................ATAATGATGATGATGATGATGACGT......................................................................................................................................................................................................................................................... 25 1 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................GATGATGATGATGATGACGT......................................................................................................................................................................................................................................................... 20 0 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TGGGATGTCGATGATGATGCTG...................................................................................................................................................................................................................................................................... 22 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GTTGATGATATCGAAGAT......................................................................................................................................................................................................................................... 18 2 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................TGATGATGATGATGATGATGAC........................................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................GATGATGATGATGATGATGATGATGAT.............................................................................................................................................................................................................................................................. 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................ATGGCGACGATGACGACAATGA............................................................................................................................................................................................................ 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GATGATGATGATGATGATGA.................................................................................................................................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................GGATGATGATGATGATGATGAT.................................................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................ATGATGATGATGATGATGATGA............................................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................TGGGATGTAGATGATGATGC........................................................................................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................GATGATGATGATGATGATGACG.......................................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................ATGATGATGATGATGATGAC........................................................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................GATGATGATGATGATGATGAT.............................................................................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAGCCGGGTGCAAGTTCTCGTATGTGGTACGCGACCTCGTGTACAAAGTCCACCCACTGCCACTACAGCTTAAGCTCCACACCCTACTACTACTACTACTACTACTACTACTGCAGCTACTATAGCTACTACTAATGCTACCGCTGTTACTGCTGTTACTACTGCTGTTACCGTAACTCGAAACTAAAGTTAACCGCAGACGTAGCGGCAGCGAGTACCTTACGGTCGCGTTGGTTACACTATCAGAGCGTTAGTAGTCATCACTATCGTTATTACTAGGTGCACGACGTGCAGAGAGGAAGAAGCGAGGCGTCCTTAGCAGGTAGTGGCTTCGCCAGCTCTCTGTCGATTTACGGTGTCGGTG
**********************************************************************************************************************..((((.((..(((((((...))))))))).))))(((((((((....((((.((((..(((...(((.(((.....))))))...))))))).))))....)))))))))..(((((..(((....))).)).)))........***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060679
140x9_testes_total
 SRR060678
9x140_testes_total
 SRR060675
140x9_ovaries_total
 SRR060687
9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060658
140_ovaries_total
 SRR060666
160_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060674
9x140_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060688
160_ovaries_total
 GSM1528803
follicle cells		 M027
male body		 SRR060660
Argentina_ovaries_total
 SRR060657
140_testes_total
 SRR060677
Argx9_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
................................................................................ACCCTACTACTACTACTACTACT..................................................................................................................................................................................................................................................................... 23 0 1 4.00 4 0 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................ACCCTACTACTACTACTA.......................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................ACCTCTGTTACTGGTGTTAC............................................................................................................................................................................................................. 20 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CTACTACTACTACTACTACT............................................................................................................................................................................................................................................................ 20 0 20 0.65 13 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................ACACACTACTACTACTACTACTACTA.................................................................................................................................................................................................................................................................... 26 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................ACTACTACTACTACTACTACT............................................................................................................................................................................................................................................................ 21 0 20 0.30 6 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................CTACTACTACTACTACTACT.................................................................................................................................................................................................................................................................. 20 0 20 0.30 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................TAGTAGTCATAACCATCGT.............................................................................................. 19 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................ACCATACTACTACTACTACTACT..................................................................................................................................................................................................................................................................... 23 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................ATCAGAGGGTTAGTCGTC......................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................ACTACTACTACTACTACTACT............................................................................................................................................................................................................................................................... 21 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0
...................................................................................CTACTACTACTACTACTACTAC................................................................................................................................................................................................................................................................... 22 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0
..................................................................................CCTACTACTACTACTACTACT..................................................................................................................................................................................................................................................................... 21 0 20 0.10 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................TACTACTACTACTACTACT............................................................................................................................................................................................................................................................ 19 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
..............................................................................................ACTACTACTACTACTACT............................................................................................................................................................................................................................................................ 18 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTACTACTACTACTACTACT............................................................................................................................................................................................................................................................... 20 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CGCTGTTCCTGCTTTTTCTAC.......................................................................................................................................................................................................... 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................CCTACTACTACTACTACTACTACT.................................................................................................................................................................................................................................................................. 24 0 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................CAGGTAGGCGCTTGGCCAG.......................... 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................AACCAACTACTACTACTACTACTACT.................................................................................................................................................................................................................................................................. 26 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................CCTACTACTACTACTACTAC...................................................................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................CCCCACTACTACTACTACAAAT..................................................................................................................................................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................ACTACTACTACTACTACTACTACT............................................................................................................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................CTACTACTACTACTACTAC................................................................................................................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:3702821-3703184 - dvi_18220 ATCGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACGGTGA---------------TGTCGAATTCGAGGTGTGGGA---TGATGA------TG---A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATATCGATGA------TGATTACGATGGCGACAATGACGACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGACGACAATG-------------------------------------------------------GCATTGAGC-TTTGATTTCAAT----------------------------------------------T-GGCGTCTGCATCGCCG---TCGCTCATGGAATGCCAGCGCAACCAATGTGATAGTCT------CGCA------------------------ATCATCAGTAGTGATA---GCA---------ATAATGATCCACGTG---CTGCACGTCTCTCCTTCTTCGCT---CCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAGACAGCTAAATGCCACAGCCAC--------------
droMoj3 scaffold_6654:347902-348274 + dmo_2252 AGCGGCCCACATTCAAGAGAATACACCATGCGCTGGAGCATATGTTTCAGGTGGGTGACGGTGACGGTG---------ATGTCGAATTCGAGGTGTGGGA---TGATGATG---ATG---A---T---GACCTCGATG------ATATCGATGA-----------------------------------------------------------------------------------------T---------------------------GATTACGATGGCGACAATGACGACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGACGACAATG-------------------------------------------------------GCATTGAGC-TTTGATTTCAAT----------------------------------------------T-GGTGTCTGTATCACCATCGTCGCTCATGGAATGCCAGCGCAACCAATGTGATAGTCT------CGCA------------------------ATCATCAGTAGTGATAATCGCA---------ATAATGATCCACGTG---CTGCACGTCTCTCCTTCTTCGCT---CCGCAGGAATCGTCCATCACCGAAGCGGTAGAGAAACAGCTCAACGCCACAGCGAC---AGC--CAGCGG
droGri2 scaffold_15110:10972978-10973338 + ATCGGCCCACATTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACGGTGACGGTGTCGGTGTCGGTGTCGATTTCGAGGTGTGGGA---CGATGA------TG---T---C---------GATG------ATATCGATGA-----------------------------------------------------------------------------------------TGAT---------------------------TACGATGGCGACAATGACGACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACGACGACAATG-------------------------------------------------------GCATTGAGC-TTTGATTTCAAT----------------------------------------------T-GGCGTCTGCCACGCCA---TCGCTCATGGAATGCCAGCGCACCCAATGTTCAAGTCT------CGCA------------------------ATCATCAGTAGTGATA---GCA---------ATAATGATCCACGTG---CTGCACGTCTCTCCTTCTTCGCT---CCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAACAGCTAAATGCCACAGCCAG-----------CGC
droWil2 scf2_1100000004540:239925-240108 + GAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGATGGCATTGAGCTT--------------------------------------------------------------------------------------------------------------------------TGATTACAAT-----------------------------------------------------------------------------------------------------------------------------------------CAAAGGCATCGCA---G-------------------------------------------------------------------------------------------------------------------GCA-------AACAGTAGTGATA---GCAACAACAACAATATTGATCCACATGAACGTGAACGTATCTCATTCTTCGCT---CCGCAGGAATCGTCCATTACCGAAGCGGTTGAGAAACAGCTAAATGCCACAGCAGCCACAGCAGCGACAG
dp5 XR_group8:8480275-8480627 - dps_3382 G--------------------------------------------------------------------------------------------------A---CGATGA------------------------------------TGATGATGA-----------------------------------------------------------------------------------------TGATGATGA---------------GAGCAACTACGATGGCGACGATGACGATGA---------------------------------------------------------------------------------------------------------------------------TCATCCTCGTCGG------CACAGGAGCCACCGCCGCCGCTGCCACAACAACGTGGTAACGA---CGACGACGGGGCATCATAGAGGCCCTAGGGGCCATCATCATCTCGC-GGATGGCAAC--GTGGACGTTGAGC-TTTGATCGCAAT----------------------------------------------GC-GTGGCCGC-----------GGCTC-----------------------------T-C------CGCGATCATCGTCAGCAG---GCAACA-ATCAAAAGTAGTGATA---GCA---------ATAATGACCCACACG---GTGCACATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAACAGCTAAACGCCAGCAGCAG-----------CAG
droPer2 scaffold_40:688066-688598 - dpe_1650 ACAGGCCCACATTCAAGAGCATACACCATGCGCTGGAGCATATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---TGATGATT---ATG---C---AGATGATGATGATG------ATTATGAAGA------------------TGAAGATGAAGGCGAAGGCGAAGAGGAGCAGAACAATGTCCATTACGATCAAGAATGAAAGACAATGACGATGATGATGATGATGATGATGATGAGAGCAACTACGATGGCGACGATGACGC--------------------------------------------------------------------------------------------------------------------------ATGATCATCCTCGTCGG------CACAGGAGCCACCGCCGCCGCTGCCACAACAACGTGGTAACGA---CGACGACGGGGCATCATAGAGGCCCTAGGGGCCATCATCATCTCGCTGGATGGCAACGCGTGGACGTTGAGCATTTGATCGCAAT----------------------------------------------GCGGTGGCCGC-----------GGCTC-----------------------------TCC------CGCGATCATAGTCAGCAG---GCAACAGATCAAAAGTAGTGATA---GCA---------ATAATGACCCACACG---GCGCACATCTCTCCTTATCCGCTACTCCACAGGATTCGTCCATCACCGAAACGGTCGTGAAACAGCTAAACGCCA---CCAG--------------
droAna3 scaffold_13337:13974029-13974464 + dan_2632 ACAGGCCCACGTTCAAGAGTATACACCATGCGCTGGAGCATATGTTTCAGGTGGGTGATG---------------------------TCGAGGTGTGGGA---CGATGAATACTATG---A---T---------GATG------ATGATGATGATCATGGTCCTGATCC--------------------------------------------------------------------------------TGATCCTGATGATGAGGCGAGTGACTACGATGGCGACGACGACGACGACATCATCCAGCAACAGTCGGCAT---TAAAG---------------------AGC------------------------ACTCGTAACGATAGCAATAG------GAATACA------AATAGTCATAGTCATAGCCACAGG-----------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCCTGCTCCACCTCGTGGACGTGCTCTGATCAAGATCG-G------------------------------------------------------TCGATGTCGAGATCTTGGTCG--AG---GCG-------ACAATTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAACTGAACGCCAATGCCAC--------------
droBip1 scf7180000395832:915239-915656 + ATAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAATACTATGATGA---T---GAT---GATG------ATGATGATGATCATGGTCCCGATCCCGA-----------------------------------------------------------------------TCAC---------GACGATGAGGCGAGTGACTACGATGGCGACGACGACGACGACCCTC------------------ATCAGCAC----------------TCGGCAGC---------------------CATAG--ATAGCAATAGCCATAG------GAATAGGAATACAAATAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTGGACGTGCTCTGATCAAGATCG-G------------------------------------------------------TCGAGAT------------CG--AG---GCG-------ACAATTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCACCAGTAG--------------
droKik1 scf7180000302577:988303-988744 - ACAGGCCCACATTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATGATGA---C---GAT---GACG------ATGATGAAGA------------------TC--------------------------------------------------------------ATGACGATCGCGACGACGGTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCATC------------------AGCAGAACAACAACAGCAGCAGCGGCGGCGGCGGCCAGAGTCATAA------CCATAGCCATAGCACTAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGCCACCAC-----------------------------------------------------------------------------------------------------------------------------------CATAGGCACCGCC---ACCACCTCGTGAACGTGCTCTGAT------CG-A------------------------------------------------------TCGAGAT------------CG--AGGGTG----------CAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTGGAGAAGCAGCTGAACGCCAATGCCAC--------------
droFic1 scf7180000453839:2007506-2007665 - ATAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---TGATGATG---ATG---ATTAT---GAT---GATG------ACGATGACGACGATGATCACGATGAGGATC--------------------------------------------------------------ACGACGAT------------------------CGCGACGATGCTGGCGATGGCGATGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491255:3047670-3048099 - ACCGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---CGATGATAACGATG------ATAACGATGA-----------------------------------------------------------------------------------------TCACGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAACTGC------------------AGCAGAACA---------------GCGGCAGCATCCACAGCCATGTCCATAGCCATAGCCATAGCAATAGCCATAGGAATAGGAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGCGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------
droRho1 scf7180000779409:49656-50064 + ACCGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGAAGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------AGCAGAACA---------------GCGGCAGCATTCACAGCCATGT------CCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCAAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACTGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------
droBia1 scf7180000302428:3497025-3497424 + ACCGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGAAGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------AGCAGAACA---------------GCGGCAGCATC------------------CATAGCCATAGCAATAGCCATAGGAAC---AATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------
droTak1 scf7180000415352:755322-755742 + ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGATGACGATGAAT---ATG---A---C---------GATGACGAAGATCACGAGGA-----------------------------------------------------------------------------------------TCACGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCAGC------TAC---------AGCAGAACA---------------GCGGCAGCGTCCACAGTC------------ATAGCCATAGCA------ATAG------GAATAGG------AGTAGTCATAGTCATAGCCATAGCCACAGGCATCGC-----------------------------------------------------------------------------------------------------------------------------CACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAATTAGTGAAA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------
droEug1 scf7180000409711:722891-723299 + ACCGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---T---------GATG------ATAACGAAGA-----------------------------------------------------------------------------------------TCATGACGATGATGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------AGCAGAACA---------------ACGGCAGCATACACAGCCATGT------CCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------
dm3 chr3L:16620243-16620651 - ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGATGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------ATCAGAACA---------------GCGGCAGCATCCACAGCCATGT------GCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTGGAAAAGCAGCTGAACGCCAACGCCAC--------------
droSim2 3l:16215572-16215965 - dsi_6764 ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGATGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------ACCAGAACA---------------GCGGCAGCATCCACAGCCATGT------GCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCT-----------------------------
droSec2 scaffold_0:8698097-8698505 - ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGATGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------ACCAGAACA---------------GCGGCAGCATCCACAGCCATGT------GCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------
droYak3 3L:17450283-17450691 + dya_812 ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATCACGATGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------ACCAGAACA---------------GCGGCAGCATCCACAGCCATGT------GCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGACACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------
droEre2 scaffold_4784:17207750-17208158 + ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGAAGA-----------------------------------------------------------------------------------------TCGTGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------ACCAGAACA---------------GCGGCAGCATCCACAGCCATGT------GCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATCGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACGGTGA---------------TGTCGAATTCGAGGTGTGGGA---TGATGA------TG---A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATATCGATGA------TGATTACGATGGCGACAATGACGACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGACGACAATG-------------------------------------------------------GCATTGAGC-TTTGATTTCAAT----------------------------------------------T-GGCGTCTGCATCGCCG---TCGCTCATGGAATGCCAGCGCAACCAATGTGATAGTCT------CGCA------------------------ATCATCAGTAGTGATA---GCA---------ATAATGATCCACGTG---CTGCACGTCTCTCCTTCTTCGCT---CCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAGACAGCTAAATGCCACAGCCAC--------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................GATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATATCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.004000000010000000000000000001200000000000000000000000000000000000
..................................................................................................................................................GATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003000001001100000000000000000000000000000000000000000000000000000
..................................................................................................................................................GATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATATCGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.003000010000000000000000000002000000000000000000000000000000000000
..................................................................................................................................................GATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000020000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GATGA------TGATTACGATGGCGACAATGACGACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGACGACAA...........................................................................................................................................................................................................................................................................................................................................................................4412.002000000000000000000000000000000000000000001000000000000100000000
............TCAAGAGCATACACCATGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................GATGA-----------------------------------------------------------------------------------------TGACGTCGATGATATCGATGA------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCCAGCGCAACCAATGTGATAGTC....................................................................................................................................................................................2811.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................G------ATGATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATATCGATGA------TGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3611.001000000000000000000000000000000000000000000000000000000000010000
....................................................................................................................................................................................................................................................................................................GACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGACGACAATG-------------------------------------------------------GCATTGAGC-TT......................................................................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000010000
..................................................................................................................................................GATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................G------ATGATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATATCGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001000000000000000000000000000000000000000000000000010000000000000
......................................................................................................................................GATG------ATGATGATGA-----------------------------------------------------------------------------------------TGACGTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.002000001000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................GATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATATCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTCTCCTTCTTCGCT---CCGCAG................................................................2411.001000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGACAATG-------------------------------------------------------GCATTGAGC-TT......................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................GATG------ATGATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATATCGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3311.001000000000000000000000000000000000000000000000001000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGACAATG-------------------------------------------------------GCATTGAGC-TTT.....................................................................................................................................................................................................................................................................................................2511.001000000000001000000000000000000000000000000000000000000000000000
..................................................................................................................................................GATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATATCGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................GATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................GATGATGA-----------------------------------------------------------------------------------------TGACGTCGATGATAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................ATGATGATGA-----------------------------------------------------------------------------------------TGACGTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.672000000200000000000000000000000000000000000000000000000000000000
......................................................................................................................................GATG------ATGATGATGA-----------------------------------------------------------------------------------------TGACGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.672000000000000000000001000000000000100000000000000000000000000000
.......................................................................................................TGATGA------TG---A---T---------GATG------ATGATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.55110000000110000000000000000000000000000000000000000000000000000000
...................................................................................................................TG---A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------TG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.459000000000000000004000000000000000000020300000000000000000000000
...................................................................................................................TG---A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------TGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.255000000000000000000000000000000000000050000000000000000000000000
.......................................................................................................TGATGA------TG---A---T---------GATG------ATGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.204000000000000004000000000000000000000000000000000000000000000000
...................................................................................................................TG---A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.204000000000000000000000000000000000103000000000000000000000000000
.......................................................................................................TGATGA------TG---A---T---------GATG------ATGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.204000000000000000000000000000000000004000000000000000000000000000
...........................................................................................................GA------TG---A---T---------GATG------ATGATGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.153000000003000000000000000000000000000000000000000000000000000000
........................................................................................................GATGA------TG---A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000020000000000000000000000000000000000000000000000000
......................................................................................................................................GATG------ATGATGATGA-----------------------------------------------------------------------------------------TGACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000001010000000000000000000000000000000000000000000000000000
......................................................................................................................................GATG------ATGATGATGA-----------------------------------------------------------------------------------------TGACGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.081000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................TG---A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------TGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000001000000000000000000000000000000000000000000000
..................................................................................................GA---TGATGA------TG---A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000100000000000000000000000000000000000000000000000000000000000
........................................................................................................GATGA------TG---A---T---------GATG------ATGATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
.................................................................................................GGA---TGATGA------TG---A---T---------GATG------ATGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................ATGA------TG---A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................G---A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------TGACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000100000000000000
........................................................................................................................A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------TGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................GA------TG---A---T---------GATG------ATGATGATGA-----------------------------------------------------------------------------------------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000100000000000000000000000000000000000000000000000
droMoj3
AGCGGCCCACATTCAAGAGAATACACCATGCGCTGGAGCATATGTTTCAGGTGGGTGACGGTGACGGTG---------ATGTCGAATTCGAGGTGTGGGA---TGATGATG---ATG---A---T---GACCTCGATG------ATATCGATGA-----------------------------------------------------------------------------------------T---------------------------GATTACGATGGCGACAATGACGACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGACGACAATG-------------------------------------------------------GCATTGAGC-TTTGATTTCAAT----------------------------------------------T-GGTGTCTGTATCACCATCGTCGCTCATGGAATGCCAGCGCAACCAATGTGATAGTCT------CGCA------------------------ATCATCAGTAGTGATAATCGCA---------ATAATGATCCACGTG---CTGCACGTCTCTCCTTCTTCGCT---CCGCAGGAATCGTCCATCACCGAAGCGGTAGAGAAACAGCTCAACGCCACAGCGAC---AGC--CAGCGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................AATACACCATGCGCTGGAGCATATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
..............................................................................................GTGGGA---TGATGATG---ATG---A---T---GACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
......................ACACCATGCGCTGGAGCATATGTTTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
droGri2
ATCGGCCCACATTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACGGTGACGGTGTCGGTGTCGGTGTCGATTTCGAGGTGTGGGA---CGATGA------TG---T---C---------GATG------ATATCGATGA-----------------------------------------------------------------------------------------TGAT---------------------------TACGATGGCGACAATGACGACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACGACGACAATG-------------------------------------------------------GCATTGAGC-TTTGATTTCAAT----------------------------------------------T-GGCGTCTGCCACGCCA---TCGCTCATGGAATGCCAGCGCACCCAATGTTCAAGTCT------CGCA------------------------ATCATCAGTAGTGATA---GCA---------ATAATGATCCACGTG---CTGCACGTCTCTCCTTCTTCGCT---CCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAACAGCTAAATGCCACAGCCAG-----------CGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGATGGCATTGAGCTT--------------------------------------------------------------------------------------------------------------------------TGATTACAAT-----------------------------------------------------------------------------------------------------------------------------------------CAAAGGCATCGCA---G-------------------------------------------------------------------------------------------------------------------GCA-------AACAGTAGTGATA---GCAACAACAACAATATTGATCCACATGAACGTGAACGTATCTCATTCTTCGCT---CCGCAGGAATCGTCCATTACCGAAGCGGTTGAGAAACAGCTAAATGCCACAGCAGCCACAGCAGCGACAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTAGTGATA---GCAACA........................................................................................................................1811.00100001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAATCGTCCATTACC.................................................1811.00110000
dp5
G--------------------------------------------------------------------------------------------------A---CGATGA------------------------------------TGATGATGA-----------------------------------------------------------------------------------------TGATGATGA---------------GAGCAACTACGATGGCGACGATGACGATGA---------------------------------------------------------------------------------------------------------------------------TCATCCTCGTCGG------CACAGGAGCCACCGCCGCCGCTGCCACAACAACGTGGTAACGA---CGACGACGGGGCATCATAGAGGCCCTAGGGGCCATCATCATCTCGC-GGATGGCAAC--GTGGACGTTGAGC-TTTGATCGCAAT----------------------------------------------GC-GTGGCCGC-----------GGCTC-----------------------------T-C------CGCGATCATCGTCAGCAG---GCAACA-ATCAAAAGTAGTGATA---GCA---------ATAATGACCCACACG---GTGCACATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAACAGCTAAACGCCAGCAGCAG-----------CAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTCCTTCTCCGCCA........................................................................18151.802702601000000
.....................................................................................................................................................GATGA-----------------------------------------------------------------------------------------TGATGATGA---------------GAGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAACAGCTAAACGCCAGCAGC................2411.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC-GGATGGCAAC--GTGGACGTTGA...........................................................................................................................................................................................................................................................................................................2411.0010000000001
..........................................................................................................................................................................................................................................................GA---------------GAGCAACTACGATGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTCTCCTTCTCCGCCA........................................................................1960.1710100000000
droPer2
ACAGGCCCACATTCAAGAGCATACACCATGCGCTGGAGCATATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---TGATGATT---ATG---C---AGATGATGATGATG------ATTATGAAGA------------------TGAAGATGAAGGCGAAGGCGAAGAGGAGCAGAACAATGTCCATTACGATCAAGAATGAAAGACAATGACGATGATGATGATGATGATGATGATGAGAGCAACTACGATGGCGACGATGACGC--------------------------------------------------------------------------------------------------------------------------ATGATCATCCTCGTCGG------CACAGGAGCCACCGCCGCCGCTGCCACAACAACGTGGTAACGA---CGACGACGGGGCATCATAGAGGCCCTAGGGGCCATCATCATCTCGCTGGATGGCAACGCGTGGACGTTGAGCATTTGATCGCAAT----------------------------------------------GCGGTGGCCGC-----------GGCTC-----------------------------TCC------CGCGATCATAGTCAGCAG---GCAACAGATCAAAAGTAGTGATA---GCA---------ATAATGACCCACACG---GCGCACATCTCTCCTTATCCGCTACTCCACAGGATTCGTCCATCACCGAAACGGTCGTGAAACAGCTAAACGCCA---CCAG--------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................ATGAAGA------------------TGAAGATGAAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................................................................................GATGATGATGATGATGATGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
..........................................................................................................................................................................................................................................................GATGATGATGATGATGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000
..............................................................................................................................ATGATGATGATG------ATTATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000
droAna3
ACAGGCCCACGTTCAAGAGTATACACCATGCGCTGGAGCATATGTTTCAGGTGGGTGATG---------------------------TCGAGGTGTGGGA---CGATGAATACTATG---A---T---------GATG------ATGATGATGATCATGGTCCTGATCC--------------------------------------------------------------------------------TGATCCTGATGATGAGGCGAGTGACTACGATGGCGACGACGACGACGACATCATCCAGCAACAGTCGGCAT---TAAAG---------------------AGC------------------------ACTCGTAACGATAGCAATAG------GAATACA------AATAGTCATAGTCATAGCCACAGG-----------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCCTGCTCCACCTCGTGGACGTGCTCTGATCAAGATCG-G------------------------------------------------------TCGATGTCGAGATCTTGGTCG--AG---GCG-------ACAATTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAACTGAACGCCAATGCCAC--------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCGTGGACGTGCTCTGATC...................................................................................................................................................................................................................................................2214.004020002
......................................................................................................................................GATG------ATGATGATGATCATGGTCCTGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.003210000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCG--AG---GCG-------ACAATTAGTG....................................................................................................................................1911.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGAGCCACATG---GTGCCCA.........................................................................................2211.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGAAGCGGTCGAGAAGC.................................2011.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTGGACGTGCTCTGATC...................................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................GATGATCATGGTCCTGATCC--------------------------------------------------------------------------------TGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGAAGCGGTCGAGA....................................1811.001100000
.............................................................................................................................................................................................................................................................CCTGATGATGAGGCGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..................................................GTGGGTGATG---------------------------TCGAGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
......................................................................................................................................GATG------ATGATGATGATCATGGTCCTGATCC--------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGACGTGCTCTGATCAA.................................................................................................................................................................................................................................................2011.001000010
...GGCCCACGTTCAAGAGTATACACCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
............................................................................................................................................................................................................................................................TCCTGATGATGAGGCGAGTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.........................................................................................................................................................................................................................................................TGATCCTGATGATGAGGCGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................TATG---A---T---------GATG------ATGATGATGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071000001
droBip1
ATAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAATACTATGATGA---T---GAT---GATG------ATGATGATGATCATGGTCCCGATCCCGA-----------------------------------------------------------------------TCAC---------GACGATGAGGCGAGTGACTACGATGGCGACGACGACGACGACCCTC------------------ATCAGCAC----------------TCGGCAGC---------------------CATAG--ATAGCAATAGCCATAG------GAATAGGAATACAAATAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTGGACGTGCTCTGATCAAGATCG-G------------------------------------------------------TCGAGAT------------CG--AG---GCG-------ACAATTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCACCAGTAG--------------SizeHit CountTotal NormTotal
No Reads
droKik1
ACAGGCCCACATTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATGATGA---C---GAT---GACG------ATGATGAAGA------------------TC--------------------------------------------------------------ATGACGATCGCGACGACGGTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCATC------------------AGCAGAACAACAACAGCAGCAGCGGCGGCGGCGGCCAGAGTCATAA------CCATAGCCATAGCACTAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGCCACCAC-----------------------------------------------------------------------------------------------------------------------------------CATAGGCACCGCC---ACCACCTCGTGAACGTGCTCTGAT------CG-A------------------------------------------------------TCGAGAT------------CG--AGGGTG----------CAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTGGAGAAGCAGCTGAACGCCAATGCCAC--------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---TGATGATG---ATG---ATTAT---GAT---GATG------ACGATGACGACGATGATCACGATGAGGATC--------------------------------------------------------------ACGACGAT------------------------CGCGACGATGCTGGCGATGGCGATGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACCGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---CGATGATAACGATG------ATAACGATGA-----------------------------------------------------------------------------------------TCACGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAACTGC------------------AGCAGAACA---------------GCGGCAGCATCCACAGCCATGTCCATAGCCATAGCCATAGCAATAGCCATAGGAATAGGAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGCGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------SizeHit CountTotal NormTotal
No Reads
droRho1
ACCGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGAAGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------AGCAGAACA---------------GCGGCAGCATTCACAGCCATGT------CCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCAAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACTGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACCGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGAAGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------AGCAGAACA---------------GCGGCAGCATC------------------CATAGCCATAGCAATAGCCATAGGAAC---AATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGATGACGATGAAT---ATG---A---C---------GATGACGAAGATCACGAGGA-----------------------------------------------------------------------------------------TCACGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCAGC------TAC---------AGCAGAACA---------------GCGGCAGCGTCCACAGTC------------ATAGCCATAGCA------ATAG------GAATAGG------AGTAGTCATAGTCATAGCCATAGCCACAGGCATCGC-----------------------------------------------------------------------------------------------------------------------------CACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAATTAGTGAAA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------SizeHit CountTotal NormTotal
No Reads
droEug1
ACCGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---T---------GATG------ATAACGAAGA-----------------------------------------------------------------------------------------TCATGACGATGATGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------AGCAGAACA---------------ACGGCAGCATACACAGCCATGT------CCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------SizeHit CountTotal NormTotal
No Reads
dm3
ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGATGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------ATCAGAACA---------------GCGGCAGCATCCACAGCCATGT------GCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTGGAAAAGCAGCTGAACGCCAACGCCAC--------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------CG--AGGGTGCA-------GCAAGTAGTGA...................................................................................................................................221159.0015900000000000000000000000000000000000000001002000000000003000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000020000000000000000000000011100000010002000000000000010001001010201020001000100000401020001001000000000021100100000431041231242201301621123255920
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------CG--AGGGTGCA-------GCAAGTAGTG....................................................................................................................................21131.003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000000000011001001000000000000000000000000000000001000000000000001000001001000010000100010016200
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------CG--AGGGTGCA-------GCAAGTAGTGA...................................................................................................................................23121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000010000000100000000000000000000000000000000000000000001110300020600000000001100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------CG--AGGGTGCA-------GCAAGTAGTGAA..................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000120000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------CG--AGGGTGCA-------GCAAGTAGTGT...................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000001010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------.................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGAAAAGCAGCTGAAC.........................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------CG--AGGGTGCA-------GCAAGTAGTG....................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000001000
...GGCCCACGTTCAAGAGCATACACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCGACGTGCTCTGAT------CG-T------------------------------------------------------....................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000100000000
............................................................................................................................C---------GATG------ATAACGATGA-----------------------------------------------------------------------------------------TCATGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--AGGGTGCA-------GCAAGTAGTGA...................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------CG--AGGGTGCA-------GCAAGTAGTGAA..................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCTTCTCCGCTCCTCCGCA.................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACGTTCAAGAGCATACACCATGCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................ACGAGCTCC------------------ATCAGAACA---------------GCGGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CGAGCTCC------------------ATCAGAACA---------------GCGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTGGAGCACATGTTTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------CG--AGGGTGCA-------GCAAGTAG......................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------....................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGGTGGAAAAGCAG...............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGGGTGACG---------------------------TCGAGGTGTGGGA---CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAAGCGGTGGAAAAGCA................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------CG--AGGGTGCA-------GCAAGTAGT.....................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---ACCACCTCGTCGACGTGCTCTGAT------..............................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTCCTTCTCCGCCA........................................................................18131.46190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200002100040100000020000000000000001010000000000000000000000000000000000000020000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATA---GCA---------ATAATGAGCCACATG---GTGCC...........................................................................................2811.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGCATACACCATGCGCTGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................ACCATGCGCTGGAGCACATGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGG..........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------CG--AGGGTGCA-------GCAAGTAGT.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAG...............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GC............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTGGAAAAGCAGCTGAA..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CATGCGCTGGAGCACATGTTTCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................CATAGCAATAGCCATAG------GA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGGGTGACG---------------------------TCGAGGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................ACCATGCGCTGGAGCACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------T...................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................................................................................................................................................................................................................................................................................ACGAGCTCC------------------ATCAGAACA---------------GCGGCAGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAAAAGCAGCTGAACG........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTGCTCTGAT------CG-C------------------------------------------------------TCGA................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................ATAACGATGA-----------------------------------------------------------------------------------------TCATGACGATGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAAAAGCAGCTGAA..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCATCACCGAAGCGGTG........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCAAGAGCATACACCATGCGCTGGAGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGAGCCACATG---GTGCTTT.........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................GAGGTGTGGGA---CGATGAAT---ATG---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GT------GCATAGCCATAGCAATAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------..................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................CATACACCATGCGCTGGAGCACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..AGGCCCACGTTCAAGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--AGGGTGCA-------GCAAGTAGTGATA---GCA---------..................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------ATAATGAGCCACATG---GTGC............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGAGCCACATG---GTGCCCATCTC.....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGTTCAAGAGCATACACCATGCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--AGGGTGCA-------GCAAGTAGTGATA---G.............................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AATAGCCATAG------GAATAGG------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGAGCATACACCATGCGCTGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGAAAAGCAGCTGAACGC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCACCGAAGCGGTGGAAAAG..................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACAGGCCCACGTTCAAGAGCATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..................................................GTGGGTGACG---------------------------TCGAGGTGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................T------GCATAGCCATAGCAATAGCCATAG------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TGCTGGCGAGGAGGCGAGTGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------.................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTGGAAAAGCAGCTGAACGC.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGGGTGACG---------------------------TCGAGGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................CGAGTGACTACGACGGCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CGACGACGAGCTCC------------------ATCAGAACA---------------GCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ATAGCCATAG------GAATAGG------AGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAG...............................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AG...........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGAT------------CG--AGGGTGCA-------GCT...........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAAAAGCAGCTGAAC.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................TGCTGGCGAGGAGGCGAGTGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TGACGATGCTGGCGAGGAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGA..............................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................................................CAGAACA---------------GCGGCAGCATCCACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................................................................................................................GACGAGCTCC------------------ATCAGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................ATG------ATAACGATGA-----------------------------------------------------------------------------------------TCATGACGATGCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCG.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................GGAGCACATGTTTCAGGTGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TAGCCATAG------GAATAGG------AGTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCGACGTGCTCTGAT------CG-...........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................ATCCACAGCCATGT------GCATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................AGCTCC------------------ATCAGAACA---------------GCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GCGAGTGACTACGACGGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................ATACACCATGCGCTGGAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................ACGATGCTGGCGAGGAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................ATACACCATGCGCTGGAGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CAGAACA---------------GCGGCAGCATCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACCGAAGCGGTGGAAAAGC.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGT........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCACCGAAGCGGTGGAAAAGCAGCT.............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GACGACGAGCTCC------------------ATCAGAACA---------------GCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................CGAGCTCC------------------ATCAGAACA---------------GCGGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTGCA-------GCAAGTAGTGA...................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................................................................................................................................................................................................GGCGACGACGACGACGAGCTCC------------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGATGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------ACCAGAACA---------------GCGGCAGCATCCACAGCCATGT------GCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCT-----------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------.................................................................................................................................................................2011.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATAGCAATAGCCATAG------GAATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTCCTTCTCCGCCA........................................................................18121.001217040000000000000
..........................................................................................AGGTGTGGGA---CGATGAAT---AT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..................................................................................................................................................AACGATGA-----------------------------------------------------------------------------------------TCATGACGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTCTCCGCTCCTCCA...................................................................1830.33100000000010000000
droSec2
ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGATGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------ACCAGAACA---------------GCGGCAGCATCCACAGCCATGT------GCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------CG--AGGGTGCA-------GCAAGTAGTGA...................................................................................................................................2311.0010100
......................................................................................................................................................................................................................................................................................................CGAGCTCC------------------ACCAGAACA---------------GCGGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-------GCAAGTAGTGATA---GCA---------..................................................................................................................1911.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------CG--AGGGTGCA-------GCAAGTAGTGA...................................................................................................................................2211.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAT------------CG--AGGGTGCA-------GCAA..........................................................................................................................................2011.0010010
.....................................................................................................................................................GATGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
................GAGCATACACCATGCGCTGGAGCACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
...............................................CAGGTGGGTGACG---------------------------TCGAGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTCCTTCTCCGCCA........................................................................18110.0911000
droYak3
ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATCACGATGA-----------------------------------------------------------------------------------------TCATGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------ACCAGAACA---------------GCGGCAGCATCCACAGCCATGT------GCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGACACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTCCTTCTCCGCCA........................................................................18162.1935035000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGAGAAGCAGCTGAACGC.......................2111.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------CG--AGGGTGCA-------GCAAGTAGTG....................................................................................................................................2111.00100000010000
........................................CATGTTTCAGGTGGGTGACG---------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................................................................................................................G------ATCACGATGA-----------------------------------------------------------------------------------------TCATGACGATGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.............................................................................................................................................................................................................................................................GCTGGCGAGGAGGCGAGTGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--AGGGTGCA-------GCAAGTAGTGA...................................................................................................................................2111.00100000010000
droEre2
ACAGGCCCACGTTCAAGAGCATACACCATGCGCTGGAGCACATGTTTCAGGTGGGTGACG---------------------------TCGAGGTGTGGGA---CGATGAAT---ATG---A---C---------GATG------ATAACGAAGA-----------------------------------------------------------------------------------------TCGTGACGATGCTGGCGAGGAGGCGAGTGACTACGACGGCGACGACGACGACGAGCTCC------------------ACCAGAACA---------------GCGGCAGCATCCACAGCCATGT------GCATAGCCATAGCAATAGCCATAG------GAATAGG------AGTAGTCATAGTCATAGC-----------------------------------------------------------------------------------------------------------------------------------------CACAGGCACCGCC---ACCACCTCGTCGACGTGCTCTGAT------CG-C------------------------------------------------------TCGAGAT------------CG--AGGGTGCA-------GCAAGTAGTGATA---GCA---------ATAATGAGCCACATG---GTGCCCATCTCTCCTTCTCCGCTCCTCCGCAGGAATCGTCCATCACCGAAGCGGTCGAGAAGCAGCTGAACGCCAACGCCAC--------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------CG--AGGGTGCA-------GCAAGTAGTGA...................................................................................................................................2212.0020020000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------CG--AGGGTGCA-------GCAAGTAGTG....................................................................................................................................2112.0020000020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------CG--AGGGTGCA-------GCAAGTAG......................................................................................................................................2011.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTCCATCACCGAAGCGGTC........................................2211.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCAGCTGAACGCCTT....................1930.3310000010

Generated: 05/16/2015 at 09:39 PM