ID:

dvi_18200

 Coordinate:

scaffold_13049:3655208-3655358 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.3 -11.9 -11.8

Flybase annnotation

exon [dvir_GLEANR_12856:3]; CDS [Dvir\GJ12921-cds]; intron [Dvir\GJ12921-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCTGTTCCCGCTGCACGCCTCCCCCGCCTCCAAGCAACAGTTACTAAACAAACCGACAGCACTGTGGAAACTGGCTCGCCAGAGCTTTCGGTGCTGCGCTTGTGCTTTTACTAACGCCCCAACGTTGCGCCTCCGTATCCGCCTACGCCCGTGTGTTTGCCTTAGCTGCGTTGATAAGCATTCTGCCCATCTACGTGCAGAGACTTGCCACCTCAATACTTTGGTATCGTCGAAGCAGTTCGTGAAGGTG
**********************************************************************************........(((((.(((.(((.((.((....)).))..)))))).)))))........*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060684
140x9_0-2h_embryos_total
 GSM1528803
follicle cells		 M061
embryo
 SRR060679
140x9_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 V116
male body		 SRR060681
Argx9_testes_total
 V047
embryo
 M027
male body		 SRR060663
160_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060678
9x140_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060657
140_testes_total
 SRR060658
140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 M028
head
 SRR060662
9x160_0-2h_embryos_total
 SRR060654
160x9_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR060677
Argx9_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060683
160_testes_total
 SRR060688
160_ovaries_total
 SRR060689
160x9_testes_total
 SRR1106714
embryo_2-4h
 SRR1106723
embryo_12-14h
 SRR1106730
embryo_16-30h
 SRR060687
9_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 V053
head
..................................................................................GAGCTTTCGGTGCTGCGCTT..................................................................................................................................................... 20 0 1 4.00 4 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACGTTGCGCCTCCGTATC............................................................................................................... 18 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GCCAGAGTTTTCGGTGCT........................................................................................................................................................... 18 1 2 2.50 5 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................TTGGTATCGTCGAAGCAGTTC......... 21 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CTTTCGGTGCTGCGCTTGT................................................................................................................................................... 19 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AGCATTCTGCCCATCTACGTGC.................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TTTGCCTTAGCTGCGTTGAT........................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AACGCCCCAACGTGGCGCCTCCGT.................................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TGCCTTAGCTGCGTTGATA.......................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................GCTGTGGAAACTGGCTCGC........................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AGCTACGTGCAGAGACTTGC.......................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ATCGTCGAAGCAGTTCGTGAAGGT. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................AGAGCTTTCGGTGCTGCGCTT..................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTATCCGCCTACGCCCGTGTGT.............................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................TTTCGGTGCTGCGCTTGTGCTTTTACT.......................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TACGTGCAGAGACTTGCCACC...................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AACCGACAGCACTGTGGAAACTGGCT.............................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TTTCGGTGCTGCGCTTGTGCT................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................GCCCATCTACGTGCAGAGACTTGACA........................................ 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ATACTTTGGTATCGTCGAAGC.............. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGTGGAAGCTGGCTCGCC.......................................................................................................................................................................... 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................ACGTGCAGAGACTTGCCAC....................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................GAAACTGGCTCGCCAGAGCTTT.................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................TTTCGGTGCTGCGCTTGTGC................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GCCACCTCAATACTTTGGTATCGTC................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................ATCGTCGAAGCAGTTCGTGAAGGTG 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAACCGACAGCACTGTGGAAACTGGCT.............................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GTGTGTTTGCCTTAGCTGCGT............................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................GCGCTTGTGCTTTTACTAAC....................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................CTACGTGCAGAGACTTGCCACCTCAAC................................. 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTTACTAACGCCCCAACGTTGC.......................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CTTAGCTGCGTTGATAAGC....................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................ATCTACGTGCAGAGACTTG........................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GTGTTTGCCTTAGCTGCGTT.............................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................ACAAACCGACAGCACTGTGGAA..................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................GAGCTTTCGGTGCTGCGCT...................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................GCCCATCTACGTGCAGAGA............................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GTTCCCGCTGCACGCCTTCCCCGCCT............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................CACCTCAATACTTTGGTA........................ 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................ACAGTTACTAAACAAACCGACAGCA............................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GCCAGAGCTTTCGGTGCTGC......................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CTACGCCCGTGTGTTTGCCTTA...................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................ATCTACGTGCAGAGACTTGCCACCTCA................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAACCGACAGCACTGTGGAAACT.................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AACCGACAGCACTGTGGAAACTGGCTCGC........................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................GAAGCAGTTCGTGAAGGTG 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CGACAGCACTGTGGAAACTGGT............................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................GGCTCGCCAGAGCTTTCGGTG............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................GCTTTCGGTGCTGCGCTTGT................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................AAACAAACCGACAGCACTG.......................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TTTACTAACGCCCCAACGTTG........................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TTGCGCCTCCGTATCCGCCTA......................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TACTAAACAAACCGACAGC.............................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GCCCGTGTGTTTGCCTTAGCTGC................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GCTGCACGCCTCCCCCGCCTCC........................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CATCTACGTGCAGAGACTTGC.......................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TTACTAAACAAACCGACAGCACTGTG........................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AACGCCCCAACGTTGCGCCTCCGTAT................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TCCCGCTGCACGCCTCCCCC................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACTTGCCACCTCAATACTTTGGTATCGT.................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................TAAACAAACCGACAGCACTGT......................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................AGCTTTCGGTGCTGCGCTTGTG.................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................GCGTTGATAAGCATTCTGCCC.............................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GTGTGTTTGCCTTAGCTGC................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................ACAGTTACTAAACAAACCGACAGC.............................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................ACCGACAGCACTGTGGAAACTGGC............................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................CACCTCAATACTTTGGTATCGTCGAAG............... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAACCCACACCACTGTGGAAA.................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GTGCTGCGCTTGTGCTTTTAATAAC....................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CTCCGTATCCGCCTACGCCC.................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGTGGAAGCTGCCTCGCCA......................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GCCAGAGTTTTCGGTGCTC.......................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................CTAGCCAGAGCTTCCGGT.............................................................................................................................................................. 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................GATTGTGCTTTGACTCACGC..................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTTGTGCTTTTACCAGCGCCC................................................................................................................................... 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................................................GTCGCCGCCGTTCGTGAAGG.. 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CTGTGAAACCTGGCTGGCC.......................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TCCCCCGCCTCTAATCCAC.................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................AGGGAACGGGCTCGCCAGA....................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAGACAAGGGCGACGTGCGGAGGGGGCGGAGGTTCGTTGTCAATGATTTGTTTGGCTGTCGTGACACCTTTGACCGAGCGGTCTCGAAAGCCACGACGCGAACACGAAAATGATTGCGGGGTTGCAACGCGGAGGCATAGGCGGATGCGGGCACACAAACGGAATCGACGCAACTATTCGTAAGACGGGTAGATGCACGTCTCTGAACGGTGGAGTTATGAAACCATAGCAGCTTCGTCAAGCACTTCCAC
***************************************************************************************************************........(((((.(((.(((.((.((....)).))..)))))).)))))........********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060679
140x9_testes_total
 M047
female body
 V053
head
 SRR060662
9x160_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060689
160x9_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 V116
male body		 SRR060684
140x9_0-2h_embryos_total
 V047
embryo
 SRR060683
160_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
...........................................................................................................................................GGCGGATGCGGGCACACAAAC........................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GTAAGGCGGGTAGATGCACG.................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CGGAGGGGGCGGAGGTTCGTT..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................ATGATTGCGGGGTTGCAACGCG........................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................GATTTGTTTGGCTGTCGTGAC.......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GGTAGGTGCACGTCTCTGAAC........................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................GATGCACGTCTCTGAACGTTG....................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................CGACGCGAACACGGAGATGA.......................................................................................................................................... 20 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................GGGCGGAGGTTCGTTGTC.................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................TTGTTTGGCTGTCGTGACACCTTT.................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AACTATTCGTAAGACGGGTAGATGCAC..................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................GGCGGGGTCGGAGGTTCGT...................................................................................................................................................................................................................... 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCAATGATTTGTTGGGCCTTC............................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CGGTGGAGTTCTGAGACCGTA....................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................TGGCTATCGTGGAACCTTT.................................................................................................................................................................................... 19 3 11 0.18 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0
......................................................................................................................................................................................................................................AGCTTCGTCTAGGACTCC... 18 3 20 0.15 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1
..............................................TGAGTTTGGCTGTCGTCAC.......................................................................................................................................................................................... 19 3 20 0.15 3 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0
......................................................................................................................................................................................................................................AGATTCGTCTAGCACTCC... 18 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0
........................................................................................................CGGAAATGTTTGCGTGGTTG............................................................................................................................... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......GGGCGATGCTCGGAGGGGG................................................................................................................................................................................................................................. 19 3 15 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......GGGCGACGCTCGGAGGTGG................................................................................................................................................................................................................................. 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................CTCAACTATTGGTATGACG................................................................ 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................TGGCAACGCGGAGTCATG................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................CGAAAGGCACCACGCGCAC.................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:3655158-3655408 + dvi_18200 ATCTGT----------------------TCCCGCTGCACG-------------CC------TCCC---CCGCCTCCAAGCAACA-------------------GTTACTAAACAA-ACC---GAC------A------------------------------------------------GCACTGTGGAAACTGGC--TCGCCAGAGCTT----------------------------------------------TCGGTGCTGCGCTT---GTGCTTTTACTAACGCCCCAACGTTGCGCCT--------------CCGT--------------------------AT---------------------------CCGCCTACGCCCGTGT-GTTTGC------------------------CTTAGCTGCGTTGATAAGCA---TT--CT---GCCCA---TCTACGTGCAGAGACTTGCCACCTCAATACTTTGGTATCGTCGAAGCAGTTCGTGAAGGTG
droMoj3 scaffold_6654:393296-393531 - CGCTAC------------------------CCGCCGCACG----------------------------------------------------------------------------------------------------CTCACCCGCAACTAAA------------CCATATTCAACTGCAGCGTGGAAACTGGC--TCTGCTGAGCTT----------------------------------------------TTGTCGTCGCGCTT---GTGCTTTTACTAACGCCCCCTGGTTACGCCC--------------ACGCCTCTGCCTGT---------------------------------------------------------ATACCCTGTGC------------------------CTTAATACCGCTGATAAGTA---TT--CT---GCGTATATACTCTGTTCAGAGAGTTGCCACCTAAGCACCTTGACCTCATCGAAGCAGTTTGTGAAGGTA
droGri2 scaffold_15110:7804261-7804562 + TCA-GT----------------------TCCCGCAG---CCTTACCCGTTCCCGC------TTCC---CCGCCTTCCAGTTACA-------------------GTTACTAAACAAAACC---CAT------AGCAACCAATCC------------------------TACATATTG----GCACAGTGGAAATTGGC--TGAGAAGAGCTTTCAAT-------------ATTGTTGTCGCAG---------------TTGTTGTTGTGCTTGCTGTGCTTTTACTAACGCCCCATTGTTACCCCC--------------ACGC--------------------------CG---------------------------CCGCCAACTTCTTCAT-CGTGCG------------------------CTGAACGACGCTGATAAGCA---TT--CT---GGGTA---TCTACGTGCAGAGACGTGCCACCTAAATACACTCGTCTCATCGAAACAGTTCGTCAAAGTG
droWil2 scf2_1100000004511:2419615-2420005 - AAGCAATTTAAACATTTTCTCCACAGTTACCCGAC------CTATCCAAAGCCGTTACCTCG---CAACCAAAT------CCCA-------------------ACTACTAAACAACAAC---AACAACAATAATAATAA---CAACAACAACTGGAACATCAAAAACAACACTATCACCA----------------ACA--AGAAAAG-------CGTTGCTAGCTCATATCGATATCTAACTGAACATTATCGCTCTCGCTCCTCCTTTA---TCGCTGCTGCTAACATCCCATTTTTCCACCCGTCCCCGCTAGCTGCCGC--------------------------TG---------------------------CTGCTGCTGCTCGTTC-CCGTGCCCGTGCTGCATTGTCACAAAGTTTT--------TTTGATAAGCC---AT--TTAACGCTCATTTCCATCATACAGAGACTTCACATCTAAATAGCGTTATCTCATCCAAGCAATTTGTAAAAGTC
dp5 XR_group3a:1095284-1095538 + dps_2903 AGCTGT-------------------------------------------------TACCCCG---CAACCGAAACCCAGCCACA-------------------GTTACTAAACACCAGC---GAGAATAACAGCAGAAAGTCCACCCGCAGCCAGAACACTTCCCCTTCCATATTCAACA----------------ACC--AGAAAAA-CTGCAAC------------------------------------------------------------------------------------------------------------------------GTTGCTAACCATTATCGGCTGTTT---GCTAAC-----------------------GT-CTCTCC------------------------CTCAACA--CTCGATAAGCA---TT--CTAACGCCCATCTCCGCCGAATAGAGACTGCCCATCTGAACGAGCTACTTTCGTCGAAGCAGTTCGTCAAAGTT
droPer2 scaffold_23:1122827-1123081 + AGCTGT-------------------------------------------------TACCCCG---CAACCGAAACCCAGCCACA-------------------GTTACTAAACACCAGC---GAGAATAACAGCAGAAAGTCCACCCGCAGCCAGAACACTTCCCCTTCCATATTCAACA----------------CCC--AGAAAAA-CTGCAAC------------------------------------------------------------------------------------------------------------------------GTTGCTAACCATTGTCGGCTGTTT---GCTAAC-----------------------GT-CTCTCC------------------------CTCAACA--CTCGATAAGCA---TT--CTAACGCCCATCTCCGCCGAACAGAGACTGCCCATCTGAACGAGCTACTTTCGTCGAAGCAGTTCGTCAAGGTT
droAna3 scaffold_13337:1937913-1938150 - ACCCGC----------------------CGCTGCCA---------------------------------------------CCACCCTCAATCCCGTGTCGCTACTACTAAAAACAAACCCCAGCGATAACAGAAGACACTCTGAC--------GAAC---------------------------------ATA--CCCGGAGAAAAG------------------------------------------------------------------------------------------------------------------------------TCGTTGCTAGCCATAATCGTTGGACTCCCAATAATTCCCG---------------------------------------------AAGACTCTTAACT--CCCGATAAGACAGCTT--TTAACGCCTG---TTTTCGAGCAGAGACCGGCCATCTGAACGCCTTGATCTCCTCCAAGCAATTTGTGAAGGTT
droBip1 scf7180000396569:1982112-1982177 - GCCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCGAGCAGAGACCGGCCACCTGAACGCCTTGATCTCCTCCAAGCAATTCGTGAAGGTG
droKik1 scf7180000302510:993602-993835 - AGCTGT-------------------------------------------------GCTCCCC---CCGCCA-------ACAACA---------GACCTTTGTTGCTACTAAAAACCCAG---GGCGATAACAGCAAGAGCTCCTCCCACAA------C-------------------------------------------------------------------------------------------------------TCCTCCTCCA---CCGCTGCCTGCA---------------------------------------------GTATCGTTGCCAACCACTATCGGACGGCA---GTTAACCCCCG---------------------------------------------GAGTGTG--------CTAGATAAGAC----A--GTAAAGCCTG--TATTCCGAGCAGAAAGCTGCCACCTCAACGCCCTCATCCCGTCGAAGCAATTCGTCAAGGTA
droFic1 scf7180000454113:567582-567642 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCGAGCAGAAAGCGGCCACCTCAACGCGCTTATCTCATCGAAGCAATTTGTCAAGGTG
droEle1 scf7180000491249:4081365-4081429 - CCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TTTCCGAGCAGAAAGTGGACACCTCAACGCGCTTATCTCATCGAAGCAGTTCGTAAAGGTG
droRho1 scf7180000776850:444008-444072 - CCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TTTCCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCCAAGCAGTTTGTGAAGGTG
droBia1 scf7180000300910:1625386-1625446 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACGAGCAGAAAGCGACCACCTCAACGCCCTAATCTCCTCGAAGCAGTTCGTGAAGGTG
droTak1 scf7180000415095:299265-299318 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAAGCGGCCACCTCAACTCGCTAATCTCCTCCAAGCAATTTGTGAAGGTG
droEug1 scf7180000409007:330512-330572 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCGAGCAGAAAGCGGACACCTCAACGCGCTAATCTCGTCGAAGCAGTTTGTGAAGGTG
dm3 chr3L:1518379-1518439 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCGAAGCAATTTGTGAAGGTG
droSim2 3l:1428370-1428625 + ATATAC----------------------TCAGAGT--------------TTTCAC------TTCCCCGCCA-------GAAACACCCCAAGAACACCTTTGTTGCTACTAAAAACGACA---GGCGATAACAAC---AGCTCC---------------------CC-------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAATCGTTGCTAACTATTATCGGACAGCTCCAGTTAACCCCCCGAAGCAGCCGAATCCGAA--------CCCCAGCG-------------GAGCG--------GCAGATAAGACCACCTCAGTAAAG--CATCTTTTTCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCGAAGCAATTTGTGAAGGTG
droSec2 scaffold_2:1544837-1544897 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCGAAGCAATTTGTGAAGGTG
droYak3 3L:1467616-1467676 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCAAAGCAATTCGTGAAGGTG
droEre2 scaffold_4784:1494682-1494742 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCAAAGCAATTCGTGAAGGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATCTGT----------------------TCCCGCTGCACG-------------CC------TCCC---CCGCCTCCAAGCAACA-------------------GTTACTAAACAA-ACC---GAC------A------------------------------------------------GCACTGTGGAAACTGGC--TCGCCAGAGCTT----------------------------------------------TCGGTGCTGCGCTT---GTGCTTTTACTAACGCCCCAACGTTGCGCCT--------------CCGT--------------------------AT---------------------------CCGCCTACGCCCGTGT-GTTTGC------------------------CTTAGCTGCGTTGATAAGCA---TT--CT---GCCCA---TCTACGTGCAGAGACTTGCCACCTCAATACTTTGGTATCGTCGAAGCAGTTCGTGAAGGTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................GAGCTT----------------------------------------------TCGGTGCTGCGCTT---............................................................................................................................................................................................................................................................2014.004000000000000000001000000000001010000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................ACGTTGCGCCT--------------CCGT--------------------------AT---------------------------C...................................................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000003
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATCGTCGAAGCAGTTC.........2112.002000000000000000000000000000001000010000000000000000000000000000
................................................................................................................................................................................................................CTT----------------------------------------------TCGGTGCTGCGCTT---GT..........................................................................................................................................................................................................................................................1912.002000000000000110000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---TT--CT---GCCCA---TCTACGTGC....................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTTGC------------------------CTTAGCTGCGTTGAT......................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGC------------------------CTTAGCTGCGTTGATA.....................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTCGAAGCAGTTCGTGAAGGT.2411.001000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................AGAGCTT----------------------------------------------TCGGTGCTGCGCTT---............................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GT--------------------------AT---------------------------CCGCCTACGCCCGTGT-GT.................................................................................................................................2211.001000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................TT----------------------------------------------TCGGTGCTGCGCTT---GTGCTTTTACT.................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGCAGAGACTTGCCACC......................................2111.001000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................A-ACC---GAC------A------------------------------------------------GCACTGTGGAAACTGGC--T......................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TT----------------------------------------------TCGGTGCTGCGCTT---GTGCT.......................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTTGGTATCGTCGAAGC..............2111.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGCAGAGACTTGCCAC.......................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................GAAACTGGC--TCGCCAGAGCTT----------------------------------------------T............................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................TT----------------------------------------------TCGGTGCTGCGCTT---GTGC........................................................................................................................................................................................................................................................2011.001000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACCTCAATACTTTGGTATCGTC...................2511.001000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTCGAAGCAGTTCGTGAAGGTG2511.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................AA-ACC---GAC------A------------------------------------------------GCACTGTGGAAACTGGC--T......................................................................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GTGT-GTTTGC------------------------CTTAGCTGCGT..........................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GCGCTT---GTGCTTTTACTAAC..............................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTGCAGAGACTTGCCACCTCAAC.................................2711.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TTTACTAACGCCCCAACGTTGC.................................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGCTGCGTTGATAAGC..................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---TCTACGTGCAGAGACTTG...........................................1911.001000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GT-GTTTGC------------------------CTTAGCTGCGTT.........................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................ACAA-ACC---GAC------A------------------------------------------------GCACTGTGGAA...............................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................GAGCTT----------------------------------------------TCGGTGCTGCGCT................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCA---TCTACGTGCAGAGA...............................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTCAATACTTTGGTA........................1811.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................ACA-------------------GTTACTAAACAA-ACC---GAC------A------------------------------------------------GCA.......................................................................................................................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GCCAGAGCTT----------------------------------------------TCGGTGCTGC...................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CTACGCCCGTGT-GTTTGC------------------------CTTA.................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---TCTACGTGCAGAGACTTGCCACCTCA...................................2711.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................AA-ACC---GAC------A------------------------------------------------GCACTGTGGAAACT............................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................A-ACC---GAC------A------------------------------------------------GCACTGTGGAAACTGGC--TCGC...................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000100000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAGTTCGTGAAGGTG1911.001000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................C---GAC------A------------------------------------------------GCACTGTGGAAACTGGT--.......................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................GGC--TCGCCAGAGCTT----------------------------------------------TCGGTG.......................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................GCTT----------------------------------------------TCGGTGCTGCGCTT---GT..........................................................................................................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
.............................................................................................................AAACAA-ACC---GAC------A------------------------------------------------GCACTG....................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TTTACTAACGCCCCAACGTTG..................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TTGCGCCT--------------CCGT--------------------------AT---------------------------CCGCCTA.............................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................TACTAAACAA-ACC---GAC------A------------------------------------------------GC........................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GCCCGTGT-GTTTGC------------------------CTTAGCTGC............................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
................................GCTGCACG-------------CC------TCCC---CCGCCTCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---TCTACGTGCAGAGACTTGC..........................................2111.001000000000000000000000000000000000010000000000000000000000000000
........................................................................................................TTACTAAACAA-ACC---GAC------A------------------------------------------------GCACTGTG..................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AACGCCCCAACGTTGCGCCT--------------CCGT--------------------------AT---------------------------....................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000001
............................TCCCGCTGCACG-------------CC------TCCC---CC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGCCACCTCAATACTTTGGTATCGT....................2811.001000000000000000000000000000000010000000000000000000000000000000
............................................................................................................TAAACAA-ACC---GAC------A------------------------------------------------GCACTGT...................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................AGCTT----------------------------------------------TCGGTGCTGCGCTT---GTG.........................................................................................................................................................................................................................................................2211.001000000000001000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGATAAGCA---TT--CT---GCCC.................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GTGT-GTTTGC------------------------CTTAGCTGC............................................................................................1911.001000000000000000000000000000000100000000000000000000000000000000
.................................................................................ACA-------------------GTTACTAAACAA-ACC---GAC------A------------------------------------------------GC........................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................ACC---GAC------A------------------------------------------------GCACTGTGGAAACTGGC--.......................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTCAATACTTTGGTATCGTCGAAG...............2711.001000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CT--------------CCGT--------------------------AT---------------------------CCGCCTACGCCC........................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CGCTAC------------------------CCGCCGCACG----------------------------------------------------------------------------------------------------CTCACCCGCAACTAAA------------CCATATTCAACTGCAGCGTGGAAACTGGC--TCTGCTGAGCTT----------------------------------------------TTGTCGTCGCGCTT---GTGCTTTTACTAACGCCCCCTGGTTACGCCC--------------ACGCCTCTGCCTGT---------------------------------------------------------ATACCCTGTGC------------------------CTTAATACCGCTGATAAGTA---TT--CT---GCGTATATACTCTGTTCAGAGAGTTGCCACCTAAGCACCTTGACCTCATCGAAGCAGTTTGTGAAGGTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................GCCTGT---------------------------------------------------------ATACCCTGTGC------------------------CTT..................................................................................................2011.001100000
..........................................................................................................................................................................................................................................................................................................TACGCCC--------------ACGCCTCTGCCG...................................................................................................................................................................................................1911.001000010
..............................................................................................................................................................................................AACTGGC--TCTGCTGAGCTT----------------------------------------------TTGTCGT......................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................AAA------------CCATATTCAACTGCAGCGTGGA................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................................................................................ATATTCAACTGCAGCGTGGAAACTGGC--T......................................................................................................................................................................................................................................................................................................................................2811.001100000
................................................................................................................................................................................AACTGCAGCGTGGAAACT............................................................................................................................................................................................................................................................................................................................................1811.001100000
.................................................................................................................................................................................ACTGCAGCGTGGAAACTGGC--T......................................................................................................................................................................................................................................................................................................................................2111.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATCGAAGCAGTTTGTGAA....2111.001000100
...................................................................................................................................................................................................GC--TCTGCTGAGCTT----------------------------------------------TTGTCGTCGCGCT................................................................................................................................................................................................................................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................CTCTGCCTGT---------------------------------------------------------ATACCCTGTGC------------------------C....................................................................................................2211.001100000
.........................................................................................................................................................AAA------------CCATATTCAACTGCAGC.....................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................A------------CCATATTCAACTGCAGCGT...................................................................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
TCA-GT----------------------TCCCGCAG---CCTTACCCGTTCCCGC------TTCC---CCGCCTTCCAGTTACA-------------------GTTACTAAACAAAACC---CAT------AGCAACCAATCC------------------------TACATATTG----GCACAGTGGAAATTGGC--TGAGAAGAGCTTTCAAT-------------ATTGTTGTCGCAG---------------TTGTTGTTGTGCTTGCTGTGCTTTTACTAACGCCCCATTGTTACCCCC--------------ACGC--------------------------CG---------------------------CCGCCAACTTCTTCAT-CGTGCG------------------------CTGAACGACGCTGATAAGCA---TT--CT---GGGTA---TCTACGTGCAGAGACGTGCCACCTAAATACACTCGTCTCATCGAAACAGTTCGTCAAAGTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................CCAACTTCTTCAT-CGTGC..............................................................................................................................1811.00110
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--CT---GGGTA---TCTACGTGCAGAGACGTGC..........................................2811.00101
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTA---TCTACGTGCAGAGACGT............................................2211.00101
.........................................................................................................................................................................................GTGGAAATTGGC--TGAGAAGA...............................................................................................................................................................................................................................................................................................................................2011.00101
...........................................................................................................................AT------AGCAACCAATCC------------------------TACATA.................................................................................................................................................................................................................................................................................................................................................................2011.00110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGCAGAGACGTGCCACCT.....................................2111.00110
.......................................................................................................................................................................................CAGTGGAAATTGGC--TGAGAAGA...............................................................................................................................................................................................................................................................................................................................2211.00110
.................................................................................ACA-------------------GTTACTAAACAAAACC---CAT------A..........................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCTGATAAGCA---TT--CT---GGGTA---TCTA.........................................................2611.00110
......................................................................................................................................................................................................................AT-------------ATTGTTGTCGCAG---------------TTGTTGTTG....................................................................................................................................................................................................................................................................2411.00101
............................................................................................................................................................................................GAAATTGGC--TGAGAAGAGCTTT..........................................................................................................................................................................................................................................................................................................................2211.00101
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGCAGAGACGTGCC.........................................1811.00110
...............................................................................................................................................................................................................................................................................GCTGTGCTTTTACTAACGCCCCA........................................................................................................................................................................................................................................2311.00110
.....................................................GC------TTCC---CCGCCTTCCAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
...................................G---CCTTACCCGTTCCCGC------TTCC---CC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
...................................................CCGC------TTCC---CCGCCTTCCAGTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAGACGTGCCACCTAAATACA..............................2511.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................T-CGTGCG------------------------CTGAACGACGCTGATAAGCA---..............................................................................2711.00110
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCTGATAAGCA---TT--CT---GGGTA---TC...........................................................2511.00110
....................................................................................................................................GCAACCAATCC------------------------TACATATTG----G.........................................................................................................................................................................................................................................................................................................................................................2111.00110
......................................................................................................................................................................................................................AT-------------ATTGTTGTCGCAG---------------TTGTTGTT.....................................................................................................................................................................................................................................................................2311.00101
.................................................................................................................................................................................................................................................G---------------TTGTTGTTGTGCTTGCT............................................................................................................................................................................................................................................................1850.20110
droWil2
AAGCAATTTAAACATTTTCTCCACAGTTACCCGAC------CTATCCAAAGCCGTTACCTCG---CAACCAAAT------CCCA-------------------ACTACTAAACAACAAC---AACAACAATAATAATAA---CAACAACAACTGGAACATCAAAAACAACACTATCACCA----------------ACA--AGAAAAG-------CGTTGCTAGCTCATATCGATATCTAACTGAACATTATCGCTCTCGCTCCTCCTTTA---TCGCTGCTGCTAACATCCCATTTTTCCACCCGTCCCCGCTAGCTGCCGC--------------------------TG---------------------------CTGCTGCTGCTCGTTC-CCGTGCCCGTGCTGCATTGTCACAAAGTTTT--------TTTGATAAGCC---AT--TTAACGCTCATTTCCATCATACAGAGACTTCACATCTAAATAGCGTTATCTCATCCAAGCAATTTGTAAAAGTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................CATATCGATATCTAACTGAA........................................................................................................................................................................................................................................................................................2011.00101000
.........................................................................................................................................................................................................AGAAAAG-------CGTTGCTAGCT............................................................................................................................................................................................................................................................................................................1811.00100010
........................................................ACCTCG---CAACCAAAT------CCCA-------------------ACTACTAAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCGTTATCTCATCCAAGCA.............2311.00100001
....................................................................................................................................................................................................ACA--AGAAAAG-------CGTTGCTAGCTCATATC......................................................................................................................................................................................................................................................................................................2711.00100001
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCTGCTCGTTC-CCGTG..............................................................................................................................2011.00101000
...........................TACCCGAC------CTATCCAAAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...........................TACCCGAC------CTATCCAAAGCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...........................TACCCGAC------CTATCCAAAGCCGTTACCTCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
.............................................................................................................................................................................ATCACCA----------------ACA--AGAAAAG-------CGT....................................................................................................................................................................................................................................................................................................................2011.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCCATCATACAGAGACTTCACAT.......................................2711.00101000
..................................................................................................................................................................................................................................................TGAACATTATCGCTCTCGCTCCTCCTT.................................................................................................................................................................................................................................................................2711.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTCACATCTAAATAGC..............................1911.00100010
........................................................................................................................................................................................................................GTTGCTAGCTCATATCGAT...................................................................................................................................................................................................................................................................................................1911.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGCTCATTTCCATCATACAGAGA...............................................2611.00100010
..............................................................................................................................................................................................................................................................................................................................GCCGC--------------------------TG---------------------------CTGCTGCTGCTC........................................................................................................................................1980.13101000
dp5
AGCTGT-------------------------------------------------TACCCCG---CAACCGAAACCCAGCCACA-------------------GTTACTAAACACCAGC---GAGAATAACAGCAGAAAGTCCACCCGCAGCCAGAACACTTCCCCTTCCATATTCAACA----------------ACC--AGAAAAA-CTGCAAC------------------------------------------------------------------------------------------------------------------------GTTGCTAACCATTATCGGCTGTTT---GCTAAC-----------------------GT-CTCTCC------------------------CTCAACA--CTCGATAAGCA---TT--CTAACGCCCATCTCCGCCGAATAGAGACTGCCCATCTGAACGAGCTACTTTCGTCGAAGCAGTTCGTCAAAGTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGCTACTTTCGTCGAAGCA.............2413.0030300000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGACTGCCCATCTGAACGAGC.............................2412.0020000000020
.........................................................................................................................................................................................................AGAAAAA-CTGCAAC------------------------------------------------------------------------------------------------------------------------GTTGC.........................................................................................................................................................................................1912.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACTGCCCATCTGAACGAGCT............................2312.0020100001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGCTACTTTCGTCGAAGC..............2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACA--CTCGATAAGCA---TT--CTAACGCC..................................................................2711.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................GTTT---GCTAAC-----------------------GT-CTCTCC------------------------CT...................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCCCATCTGAACGAGCT............................2111.0010100000000
.............................................................................................................................................CCACCCGCAGCCAGAACACTTCCCCTTC.....................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTACTTTCGTCGAAGCAGTT..........2311.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................ATTATCGGCTGTTT---GCTAAC-----------------------GT-CTCTCC------------------------C....................................................................................................2911.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................TGTTT---GCTAAC-----------------------GT-CTCTCC------------------------CTCAAC...............................................................................................2511.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CTCTCC------------------------CTCAACA--CTCGATA.....................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTCCGCCGAATAGAGACT.............................................2111.0010000010000
..................................................................................................................................................................................................................TGCAAC------------------------------------------------------------------------------------------------------------------------GTTGCTAACCATTATCG.............................................................................................................................................................................2311.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCCGAATAGAGACTGCCC.........................................2211.0010010000000
...................................................................................................................CAGC---GAGAATAACAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
..................................................................................................................................CAGCAGAAAGTCCACCCGCAGCCAGA..................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................................................................................................................GCCAGAACACTTCCCCTTCCAT..................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAGACTGCCCATCTGA...................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGCTACTTTCGTCGA.................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCTACTTTCGTCGAAGCA.............2111.0010000001000
................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------CTCAACA--CTCGATAAGCA---TT--..........................................................................2111.0010000010000
..............................................................................................................................................................................................................................................................................................................................................................TCGGCTGTTT---GCTAAC-----------------------GT-CTCTCC------------------------CTCAA................................................................................................2911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................GCTAAC-----------------------GT-CTCTCC------------------------CTCAACA--............................................................................................2111.0010010000000
.......................................................................................................GTTACTAAACACCAGC---GA..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
................................................................................................................................AACAGCAGAAAGTCCACCCGCA........................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................................................A----------------ACC--AGAAAAA-CTGCAAC------------------------------------------------------------------------------------------------------------------------GTTGCTAACC....................................................................................................................................................................................2811.0010001000000
droPer2
AGCTGT-------------------------------------------------TACCCCG---CAACCGAAACCCAGCCACA-------------------GTTACTAAACACCAGC---GAGAATAACAGCAGAAAGTCCACCCGCAGCCAGAACACTTCCCCTTCCATATTCAACA----------------CCC--AGAAAAA-CTGCAAC------------------------------------------------------------------------------------------------------------------------GTTGCTAACCATTGTCGGCTGTTT---GCTAAC-----------------------GT-CTCTCC------------------------CTCAACA--CTCGATAAGCA---TT--CTAACGCCCATCTCCGCCGAACAGAGACTGCCCATCTGAACGAGCTACTTTCGTCGAAGCAGTTCGTCAAGGTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................GT-CTCTCC------------------------CTCAACA--CTCGATA.....................................................................................2212.002200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCCCATCTGAACGAGCTACTTTCGT....................2912.002200000
......................................................................................................................................................................................................................................................................................................................................................AACCATTGTCGGCTGTTT---GCT................................................................................................................................................................2112.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCTACTTTCGTCGAAGC..............2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................TAACCATTGTCGGCTGTTT---GCTAAC-----------------------......................................................................................................................................2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACTTTCGTCGAAGCA.............1811.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGAACAGAGACTGCC..........................................1911.001100000
..................................................................................................................................................................................................................TGCAAC------------------------------------------------------------------------------------------------------------------------GTTGCTAACCATTGTCGGCT..........................................................................................................................................................................2611.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................CTCC------------------------CTCAACA--CTCGATAAGC..................................................................................2111.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCTACTTTCGTCGAAGCAGTT..........2411.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................GT-CTCTCC------------------------CTCAACA--CTCGATAAGC..................................................................................2511.001010000
......................................................................................................................................................................................................................................................................................................................................................AACCATTGTCGGCTGTTT---GC.................................................................................................................................................................2011.001100000
droAna3
ACCCGC----------------------CGCTGCCA---------------------------------------------CCACCCTCAATCCCGTGTCGCTACTACTAAAAACAAACCCCAGCGATAACAGAAGACACTCTGAC--------GAAC---------------------------------ATA--CCCGGAGAAAAG------------------------------------------------------------------------------------------------------------------------------TCGTTGCTAGCCATAATCGTTGGACTCCCAATAATTCCCG---------------------------------------------AAGACTCTTAACT--CCCGATAAGACAGCTT--TTAACGCCTG---TTTTCGAGCAGAGACCGGCCATCTGAACGCCTTGATCTCCTCCAAGCAATTTGTGAAGGTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAACGCCTTGATCTCCTCCAAGC..............2712.002020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTAACT--CCCGATAAGAC.................................................................................2112.002020000
....................................................................................................................................GAAGACACTCTGAC--------GAAC---------------------------------ATA--CCCGGA....................................................................................................................................................................................................................................................................................................................................2711.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTTAACT--CCCGATAAGACAGCT.............................................................................2611.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAGACCGGCCATCTGAACG................................2311.001100000
.......................................................................................................................................GACACTCTGAC--------GAAC---------------------------------ATA--CCCGGA....................................................................................................................................................................................................................................................................................................................................2411.001100000
.................................................................................................GTCGCTACTACTAAAAACAAACCCCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
......................................................................................................................................AGACACTCTGAC--------GAAC---------------------------------ATA--CCCGGA....................................................................................................................................................................................................................................................................................................................................2511.001010000
....................................................................................................................................................................................................................................................................................................................................................................GACTCCCAATAATTCCCG---------------------------------------------AAG........................................................................................................2111.001000010
............................................................................................................................................................................................................................................................................................................................................................................ATAATTCCCG---------------------------------------------AAGACTCTTAACT--CCCGA.......................................................................................2811.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAACGCCTTGATCTCCTCCA.................2411.001100000
...........................................................................................................................GCGATAACAGAAGACACTCTGAC--------GAA.................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.............................................................................................................................................CTGAC--------GAAC---------------------------------ATA--CCCGGA....................................................................................................................................................................................................................................................................................................................................1811.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGCCTG---TTTTCGAGCAGAGACC.............................................2611.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGGCCATCTGAACGCCTT............................2011.001100000
................................................................................................................................................................................................TA--CCCGGAGAAAAG------------------------------------------------------------------------------------------------------------------------------TCGT............................................................................................................................................................................................1811.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCTG---TTTTCGAGCAGAGACC.............................................2311.001010000
............................CGCTGCCA---------------------------------------------CCACCCTCAATCCCGTGTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...............................................................................................................................................................................................................................................................................................................................................................CGTTGGACTCCCAATAATTCCC.........................................................................................................................................................2211.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTT--TTAACGCCTG---TTTTCGAGC....................................................2511.001010000
.............................................................................................................................................CTGAC--------GAAC---------------------------------ATA--CCCGGAGAAAAG------------------------------------------------------------------------------------------------------------------------------T...............................................................................................................................................................................................2511.001000010
droBip1
GCCCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCGAGCAGAGACCGGCCACCTGAACGCCTTGATCTCCTCCAAGCAATTCGTGAAGGTGSizeHit CountTotal NormTotal
No Reads
droKik1
AGCTGT-------------------------------------------------GCTCCCC---CCGCCA-------ACAACA---------GACCTTTGTTGCTACTAAAAACCCAG---GGCGATAACAGCAAGAGCTCCTCCCACAA------C-------------------------------------------------------------------------------------------------------TCCTCCTCCA---CCGCTGCCTGCA---------------------------------------------GTATCGTTGCCAACCACTATCGGACGGCA---GTTAACCCCCG---------------------------------------------GAGTGTG--------CTAGATAAGAC----A--GTAAAGCCTG--TATTCCGAGCAGAAAGCTGCCACCTCAACGCCCTCATCCCGTCGAAGCAATTCGTCAAGGTASizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCGAGCAGAAAGCGGCCACCTCAACGCGCTTATCTCATCGAAGCAATTTGTCAAGGTGSizeHit CountTotal NormTotal
No Reads
droEle1
CCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TTTCCGAGCAGAAAGTGGACACCTCAACGCGCTTATCTCATCGAAGCAGTTCGTAAAGGTGSizeHit CountTotal NormTotal
No Reads
droRho1
CCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TTTCCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCCAAGCAGTTTGTGAAGGTGSizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACGAGCAGAAAGCGACCACCTCAACGCCCTAATCTCCTCGAAGCAGTTCGTGAAGGTGSizeHit CountTotal NormTotal
No Reads
droTak1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAAGCGGCCACCTCAACTCGCTAATCTCCTCCAAGCAATTTGTGAAGGTGSizeHit CountTotal NormTotal
No Reads
droEug1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCGAGCAGAAAGCGGACACCTCAACGCGCTAATCTCGTCGAAGCAGTTTGTGAAGGTGSizeHit CountTotal NormTotal
No Reads
dm3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCGAAGCAATTTGTGAAGGTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTCGAAGCAATTTGTGAAGGTG2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCACCTCAACGCGCTAATCTCGTCGA.................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCTCGTCGAAGCAATTTGTGAAGG..2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTCAACGCGCTAATCTCGTC...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCCACCTCAACGCGC.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACCTCAACGCGCTAATCTCGTCG..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAAGCGGCCACCTCAAC.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGCAATTTGTGAAGGT.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTAATCTCGTCGAAG...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGCAGAAAGCGGCCACCTCAACGC...............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTAATCTCGTCGAAGCA.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTAATCTCGTCGAAGC..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAAAGCGGCCACCTCAACG................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAAGCGGCCACCTCAACGC...............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTCAACGCGCTAATCTCGTCG..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAAGCGGCCACCTCAACGCGC.............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCTCAACGCGCTAATCTCGTC...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCGCTAATCTCGTCGAAGCAAT...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGCGCTAATCTCGTCGAAGC..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACCTCAACGCGCTAATCTCGTCGA.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGAAGCAATTTGTGAAGGT.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATATAC----------------------TCAGAGT--------------TTTCAC------TTCCCCGCCA-------GAAACACCCCAAGAACACCTTTGTTGCTACTAAAAACGACA---GGCGATAACAAC---AGCTCC---------------------CC-------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAATCGTTGCTAACTATTATCGGACAGCTCCAGTTAACCCCCCGAAGCAGCCGAATCCGAA--------CCCCAGCG-------------GAGCG--------GCAGATAAGACCACCTCAGTAAAG--CATCTTTTTCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCGAAGCAATTTGTGAAGGTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................GTTGCTAACTATTATCGGACA.........................................................................................................................................................................2111.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGCG-------------GAGCG--------GCAGATAAGACCAC..............................................................................2611.00100000000000001000
......................................................................................................................................................................................................................................................................................................................................................AACTATTATCGGACAGCTCCAGC.................................................................................................................................................................2311.00100100000000000000
.............................................................................................................................GATAACAAC---AGCTCC---------------------CC-------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAATC..............................................................................................................................................................................................2411.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAAGACCACCTCAGTAAAG--CATCTT............................................................2811.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTCGTCGAAGCAATTTGG.......2111.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACCTCAACGCGCTAATCTCGTC...................2611.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATTATCGGACAGCTCCAGT.................................................................................................................................................................1911.00100010000000000000
...................................................................................................TGTTGCTACTAAAAACGACA---GGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.....................................................................................................................................................................C-------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAATCGTTGCTAACTATT.................................................................................................................................................................................2111.00100100000000000000
................................................................CCCGCCA-------GAAACACCCCAAGAACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
............................................................................................................................................................................................................................................................................................................................................................TATCGGACAGCTCCAGTTAACCCCCCGA......................................................................................................................................................2811.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCAACGCGCTAATCTCGTCGAAGCA.............2811.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--------GCAGATAAGACCACCTCAGTAAAG--CA................................................................2911.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCTCGTCGAAGCAATTTGG.......2211.00101000000000000000
..........................................................................................................................................GCTCC---------------------CC-------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAATCGTTGCTAAC.....................................................................................................................................................................................2311.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCCACCTCAACGCGCTAATCTCGTCGA.................3011.00100000010000000000
droSec2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCGAAGCAATTTGTGAAGGTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGAAGCAATTTGTGAAGGTG2311.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAATTTGTGAAGGT.1811.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAAGCGGCCACCTCAACGCGC.............................2511.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTCGTCGAAGCAATTTGTGAAG...2511.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTAATCTCGTCGAAGC..............1911.0010010
droYak3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCAAAGCAATTCGTGAAGGTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCGAGCAGAAAGCGGCCACCT.....................................2411.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCGCTAATCTCGTCAAAGCA.............2411.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCAAAGCAATTCGTGA.....2011.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCTAATCTCGTCAAAGC..............2011.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTCAAAGCAATTCGTGAAGGTG2511.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAACGCGCTAATCTCGT....................1911.00100010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGCAATTCGTGAAGGT.1911.00100000010000
droEre2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCGAGCAGAAAGCGGCCACCTCAACGCGCTAATCTCGTCAAAGCAATTCGTGAAGGTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAAGCGGCCACCTCAACGCGCT............................2511.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTCAACGCGCTAATCTC......................2011.0010100000

Generated: 05/16/2015 at 09:25 PM