ID:

dvi_18045

 Coordinate:

scaffold_13049:2286564-2286714 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.5 -14.5 -14.4

Flybase annnotation

CDS [Dvir\GJ12535-cds]; exon [dvir_GLEANR_12499:1]; intron [Dvir\GJ12535-in]

No Repeatable elements found

Sense Strand Reads

-------------------###############################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATTTCTTTTTCTCGTAGAAATGCCACCTAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATATAAAAATGTCTAAAAAATGTGTGGTTTTGTCATCAGCAGCAAGGTTAAAGCAAGCACAATGCACGGATATATGTAGAAATGTGTTAAAATAAGAATTTCAAGCAAATATAACAGAAAATGTTTCGCCATATTTGCGCCACGTGCGGTGTGGCTGCGACTCGGCATTGAAAACAATTTACAACGCG
******************************************************************************.....(((((.((((((..(((........)))))))))..))))).......(((((((......)))))))................((((((((........)))))).))...******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060667
160_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR1106729
mixed whole adult body
 SRR060664
9_males_carcasses_total
 SRR1106727
larvae
 SRR1106730
embryo_16-30h
 SRR060679
140x9_testes_total
 SRR060665
9_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR1106728
larvae
 V053
head
 SRR060671
9x160_males_carcasses_total
 V047
embryo
 GSM1528803
follicle cells		 SRR060674
9x140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060682
9x140_0-2h_embryos_total
 V116
male body		 M028
head
 SRR060669
160x9_females_carcasses_total
 SRR060663
160_0-2h_embryos_total
 SRR060677
Argx9_ovaries_total
 SRR1106715
embryo_4-6h
 SRR1106716
embryo_4-6h
 SRR1106718
embryo_6-8h
 SRR1106726
embryo_14-16h
 SRR060659
Argentina_testes_total
 SRR060666
160_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060657
140_testes_total
...................ATGCCACCTAAAAAGCCAACCGAGA............................................................................................................................................................................................................... 25 0 1 7.00 7 4 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTTTTTCTCGTAGAAATGCCACCT............................................................................................................................................................................................................................... 24 0 1 5.00 5 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............CGTAGAAATGCCACCTAAAAAGC........................................................................................................................................................................................................................ 23 0 1 3.00 3 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................ACCTAAAAAGCCAACCGAGA............................................................................................................................................................................................................... 20 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TCGTAGAAATGCCACCT............................................................................................................................................................................................................................... 17 0 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ATGCCACCTAAAAAGCCAAC.................................................................................................................................................................................................................... 20 0 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTTTTTCTCGTAGAAATGCC................................................................................................................................................................................................................................... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTTCTCGTAGAAATGCCACCTAAAAAGCC....................................................................................................................................................................................................................... 29 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ATGCCACCTAAAAAGCCAACCGAG................................................................................................................................................................................................................ 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CGTAGAAATGCCACCTAAAA........................................................................................................................................................................................................................... 20 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CGTAGAAATGCCACCTAAAAAGCC....................................................................................................................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CGTAGAAATGCCACCTAAAAAGCCAAC.................................................................................................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CTCGTAGAAATGCCACCTAAA............................................................................................................................................................................................................................ 21 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TCGTAGAAATGCCACCTAAAAAGCCAACCGAG................................................................................................................................................................................................................ 32 0 1 2.00 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CTCGTAGAAATGCCACCTAAAAAGC........................................................................................................................................................................................................................ 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTTTTTCTCGTAGAAATGC.................................................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GCCACCTAAAAAGCCAACCGAGA............................................................................................................................................................................................................... 23 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CTCGTAGAAATGCCACCT............................................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....TTTTTCACGTAGAAATGCCAC................................................................................................................................................................................................................................. 21 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AAAGCCAACCGAGAAATCC.......................................................................................................................................................................................................... 19 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CGTAGAAATGCCACCTAAAAAGCCAACCGAGA............................................................................................................................................................................................................... 32 0 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ATGCCACCTAAAAAGCCAACCGAGAA.............................................................................................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TCTTTTTCTCGTAGAAATGCCACCT............................................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTCTCGTAGAAATGCCACCTAA............................................................................................................................................................................................................................. 22 0 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................AAATGCCACCTAAAAAGCC....................................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTTTTTCTCGTAGAAATGCCACCTAAAA........................................................................................................................................................................................................................... 28 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ATGCCACCTAAAAAGCCAACCG.................................................................................................................................................................................................................. 22 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTTTTCTCGTAGAAATGCCACCTAAAA........................................................................................................................................................................................................................... 27 0 1 2.00 2 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CTCGTAGAAATGCCACCTAAAAAGCC....................................................................................................................................................................................................................... 26 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTCTCGTAGAAATGCCACCTAAAA........................................................................................................................................................................................................................... 24 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTTTTTCTCGTAGAAATGCCACCTAAACA.......................................................................................................................................................................................................................... 29 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..TTCTTTTTCTCGTAGAAATG..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TTCTTTTTCTCGTAAAAATGCCACCT............................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTTTCTCGTAGAAATGCCACCTAA............................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTCTCGTAGAAATGCCACCTA.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CGTAGAAATGCCACCTAAA............................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GAAATGCCACCTAAAAAGCC....................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TCTCGTAGAAATGCCACCTAA............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TCTTTTTCTCGTAGAAATGC.................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................CCTAAAAAGCCAACCGAGAA.............................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GTAGAAATGCCACCTAAAAAGC........................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TAAAAAGCCAACCGAGAAATCCGCAAA..................................................................................................................................................................................................... 27 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................CACCTAAAAAGCCAACCG.................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TAAAAAGCCAACCGAGAAATCCGCA....................................................................................................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTCTCGTAGAAATGCCACCC............................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CGTAGAAATGCCACCT............................................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CTCGGCATTGAAAACAATTTA....... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTTCTCGTAGAAATGCCACCTAAAA........................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TTTCTTTTTCTCGTAGAAATGCC................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GCCACCTAAAAAGCCAACCGAGAAATC........................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AGCCAACCGAGAAATCCG......................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TAAAAAGCCAACCGAGAAATC........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TGCTTTTTCTCGTAGAAATGCCACCT............................................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TCGTAGAAATGCCACCTAAAAAGCC....................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AGAAATGACACCTAAAAAGC........................................................................................................................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTTTTCTCGTAGAAATGCC................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTCTCGTAGAAATGCCACCTAAAAAGC........................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TCGTAGAAATGCCACCTAAAAAGCCAACCG.................................................................................................................................................................................................................. 30 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................AAGCCAACCGAGAAATCC.......................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................ACCTAAAAAGCCAACCGAGAAATCCGC........................................................................................................................................................................................................ 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TCTCGTAGAAATGCCACCTAAAAAGC........................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTTCTCGTAGAAATGCCACCT............................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TTCTTTTTCTCGTAGAAATGCCACCT............................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTTTTTCTCGTAGAAATGCCACC................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AGAAATGCTACCTAAAAAG......................................................................................................................................................................................................................... 19 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AGAAATGCCACCTAAAAAGCCAACCGAGA............................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......TTTCTCGTAGAAATGCCACCTAAA............................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AGAAATGCCACCTAAAAAGCCAACC................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTTTCTCGTAGAAATGCCACCT............................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......TTTCTCGTAGAAATGCCACC................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TTCTTTTTCTCGTAGAAATGCCAC................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CTCGTAGAAATGCCACCCAAAA........................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ATTTCTTTTTCTCGTAGAAATGCCA.................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AGAAATGCCACCTAAAAAGCCAAC.................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AATGCCACCTAAAAAGCCAACCGAGA............................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................AATGTCTAAAAAATGTGTGGTC............................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TAACAGAAAATGTTTCGCCAT........................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTTTCTCGTAGAAATGCCACCTAAAAAGCCAACCGAGA............................................................................................................................................................................................................... 38 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CACCTAAAAAGCCAACCGAGAAATCCGC........................................................................................................................................................................................................ 28 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTCTCGTAGAAATGCCACCT............................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AGAAATGCCACCTAAAAAGCCAACCGA................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................AAGCCAACCGAGAAATCCGC........................................................................................................................................................................................................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........CGCGTAGAAATGCCACCTAAAAAGC........................................................................................................................................................................................................................ 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CGCGTAGAAATGCCACCTAAAA........................................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................AAGCCAACCGAGAAATCCGCA....................................................................................................................................................................................................... 21 2 2 1.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...........TCGTAGAAATGCCACCTAAA............................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AGGTTTCTCGTAGAAATGCCACC................................................................................................................................................................................................................................ 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TTCTTTTTCTCGTAGAAATGC.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TGCCACCGAAAAAGACAACCG.................................................................................................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TCTTTTTCTCGTAGAAATGCCAC................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GTGCGGTGTGGCTGCGACTCGGCA..................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................AAATGCCACCTAAAAAGCCAACC................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................AAAAAGCCTATCGAGAAATCC.......................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................CCAACCGAGAAATCCGGTAAGGAT................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AAAGCCAACCGAGAAATCCGCAA...................................................................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CTAAAAAGCCAACCGAGAA.............................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AGCCAACCGAGAAATCCGCAAA..................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GTAGAAATGCCACCTAAAAA.......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTTCTCGTAGAAATGCCACCC............................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GTAGAAATGCCACCTAAAAAGCC....................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTTTTTCTCGTAGAAATGCCACCTAAA............................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CACTTAAAAAGCCAACCGAGA............................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TTCTTTTTCTCGTAGAAATGCC................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ATGCCACCTAAAAAGCTAACCGAGA............................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CTCGTAGAAATGCCACCCAAAAAGCCAACC................................................................................................................................................................................................................... 30 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TTTTTCTCGTAGAAATGCCACC................................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TAAAAAGCCAACCGAGAAA............................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ATGCCACCTAAAAAGCCAACC................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTCTCGTAGAAATGCCACCTAAA............................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................ACCTAAAAAGCCAACCGAG................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTTTTTCTCGTAGAAATGCCACCTAAAAAGCCAACCGAGA............................................................................................................................................................................................................... 40 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TGTCACCTAAAAAGCTAACCGAG................................................................................................................................................................................................................ 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CACCTAAAAAGCCAACCGAGAA.............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ATGCCACCTAAAAAGCCAA..................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................CCACCTAAAAAGCCAACCGAGA............................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CTCGTAGAAATGCCACCTAAAA........................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TCTTTTTCTCGTAGAAATGCCA.................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CTTTTTCTCGTAGAAATGTCACCT............................................................................................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AGCCAACCGAGAAATCCGC........................................................................................................................................................................................................ 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CTCGTAGAAATGCCACCTAAAAA.......................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................AAAAATGTGTGGTTTTGTCAT........................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATATATGTAGAAATGTGTTAAA................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AGCCAACCGAGAAATCCGCA....................................................................................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........TGCTAGAAATGCCACCTAAAA........................................................................................................................................................................................................................... 21 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................AAGCCAACCGAGAAATCCGCAA...................................................................................................................................................................................................... 22 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................AACCGAGAAATCCGCAAAG.................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATGTGTAAAAAATGTGTGGT................................................................................................................................................................ 20 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................GCCAACCGAGAAATCCGCAA...................................................................................................................................................................................................... 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................CGAAATCCGCTAAGGATTTT.............................................................................................................................................................................................. 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................CAAGCACCATGCGCGGTTAT................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.......................................CGAGAAATCCGGTCGGAAT................................................................................................................................................................................................. 19 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................GAAATGGCACCCAAAAAGC........................................................................................................................................................................................................................ 19 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TAAGAATGGCAAGCAAATA............................................................................. 19 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGGATATTTCATAAAAAAAT.................................................................................................................................................................................. 20 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................CCAACTGAAAAGCCAACCGAAA............................................................................................................................................................................................................... 22 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAAAGAAAAAGAGCATCTTTACGGTGGATTTTTCGGTTGGCTCTTTAGGCCATTCCTAAAAAGTATATTTTTACAGATTTTTTACACACCAAAACAGTAGTCGTCGTTCCAATTTCGTTCGTGTTACGTGCCTATATACATCTTTACACAATTTTATTCTTAAAGTTCGTTTATATTGTCTTTTACAAAGCGGTATAAACGCGGTGCACGCCACACCGACGCTGAGCCGTAACTTTTGTTAAATGTTGCGC
********************************************************.....(((((.((((((..(((........)))))))))..))))).......(((((((......)))))))................((((((((........)))))).))...****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060684
140x9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
.....................CGGTGGATTTTATGGTTG.................................................................................................................................................................................................................... 18 2 11 0.09 1 1 0
...........AGCAACTTGGCGGTGGATT............................................................................................................................................................................................................................. 19 3 13 0.08 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13049:2286514-2286764 - dvi_18045 ATTTCTTTTTCTCGTAGAAATGCCACCTAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATATAAAAATGTCTAAAAAATGTGTGGTTTTGTCATCAGCAGCAAGGTTAAAGCAAGCACAATGCACGGATATATGTAGAAAT----GTGTTAAAATAAGAATTTCAAGCAAATATAACA----GAAAATGTTTCGCC--AT-ATTTGCGCCACGTGCGGTGT-GGC-----TGC---GACTCGGCATTGAAAAC---AATTTAC---AA--CG---------------------------CG
droMoj3 scaffold_6654:1577976-1578222 + ATTTCTTTTTCTCGTAGAAATGCCACCTAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATATAAAATTATATCGAAAATATGTGGTTTTGTCACCTAATTCAAAGTCAAAGCAAGCTGAATGCAATGCAGCATGTGGAAAT----GTGTTTAATTACAAATTTAACGCAAAATATACA----CAAAATGTGTCGCC--AT-ATTTGCGCCACGTGCGGTGT-GGC-----TGC---GACTCACCATTAAAAAC---AATGGTC------------------------------------AA
droGri2 scaffold_15110:3322973-3323232 - ATTTCTTTTTCTCGTAGAAATGCCACCTAAAAAGCCAACCGAGAAGTCCGGTAAGCATTTTTCATATAAAAATGCCATAAAAATGTGTGAATTAAACACCAAACGCTAAACTAATACATGGCCAATGTGCAGCAACGTGTAGAAAT----GTGTGAAAGCAAGAATTTCTAGCAAAAATAATG----CCAAATATGTAGCC--AT-GTTTGCGCCACGTGCGGCAA-A---------------------------AAC---AATAAAA---AATGTGTATGCCATAAA-TGCAGTGTGTGCCTGTG
droWil2 scf2_1100000004511:874441-874671 - ATTTCTTTTTCTCGTAGAAATGCCAGCTAAAAAGCCAGCCGAAAAATCCGGTGAGATAATTTAATAGAATTTTTAACAAAAAAAGTGTGAAAACAATACCAAATGAAAGGTTAAAGCAAGTGCTGTGCGTGGATATTAACAGAAAT----GTGTAAAAGCATTAATTTATCTGCAAAATACAA----TAAAATGTTTCGCC--AT-GTAT-GGCCACGTGCGAAGA-A---------------------------GAC----ATCTTTT--GG--CG---------------------------TA
dp5 XR_group6:7815834-7816063 - ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACTGAGAAATCCGGTAAGGATTTTTCATATAAAAATCAGCTAAAAATGTGTGGATTTATCACCAAAAGCAATGCTAAAGCATGGATAATAATCAG-AAATAAAGAA--A--TTGCATTAAATCACGAATTTAAGGCAGAAAATAGT----TTAAAT-------------GTATTCGCCACGTGCGGTGT-GGC-----TGC---GTCCAACCACGGCCAAT---AA------------------------------------------T
droPer2 scaffold_27:639359-639588 + ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACTGAGAAATCCGGTAAGGATTTTTCATATAAAAATCAGCTAAAAATGTGTGGATTTATCACCAAAAGCAATGCTAAAGCATGGATAATAATCAG-AAATAAAGAA--A--TTGCATTAAATCACGAATTTAAGGCAGAAAATAGT----TTAAAT-------------GTATTCGCCACGTGCGGTGT-GGC-----TGC---GTCCAACCACGGCCAAC---AA------------------------------------------T
droAna3 scaffold_13337:1169248-1169472 + ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATACAAAAACTGCCCAAAATTAAGTGAATTGATCAGCAAATGCAACGCGAACAAAAGGGGAATCCGCTGCAGTACAAA----TGTGCCGTGGGAATAATGGATTTAAGCCAAAAATTGGC----TGAAATAGTTGACC--AT-GTCTGAGCCACGTGCG------TCTGGA-T----------------------ACCAA-----------------------------------------AA
droBip1 scf7180000396371:1501483-1501707 + ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATACAAAAACTGACCAAAATTAAGTGAATTGATCAGCAAATGCAACGCGATTTAAAGGGGAACCTGCTGGTGTACAAA----TGTGCCGTGGGAATAATGGATTTAAGCCAAAAATTAGC----TGAAATAGTTGACC--AT-GTTTGAGCCACGTGCG------TCTGGA-T----------------------A------CCGA-----------------------------------AA
droKik1 scf7180000302577:141181-141425 - ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATATAAAAATAGGCCTAAAATGTGTGGATTAATCAGCAAAAGCAAGGCGAACACCAGGCCAATGCGTGGAAATACGAAAG--T--GCGCAGAAAATTGTTAATTTAAGGCAGAATTGTGTGTTTTTAAGCG---AGCC-CG----ATGAGCCACGTGCGGTGGTGGC-----TGCAGCGTCTGAGCAGTTGT---GGGAA-----------------------------------------CA
droFic1 scf7180000454113:412113-412353 + ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATATAAAAATAAGCGA-AAATGTGTGAATCGATGAGCAAAAGCAAGGCAAAACCAGAGGCTAACAATGGGATAACAAAAA--A--GTGCAGAAAATCACGGTTTTAAGGCAGAAATGTGT----TCAAACAGATGACC-CGTAGTTTCGGCCACGTGCAGTG---TC-----TGC---GT---------------GGGAACGCTTG--AG--TGTG-------------------------TG
droEle1 scf7180000491249:3903093-3903338 + ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATATAAAAATAAGCGTAAAATGCGTGAACTGATCAGCAAAAGCAAGCCGAAAGCAAGGGCCACAAGCGGGAAATCAAAAA--A--GTGCGGAATAAAGCGATTTTAGAGCAGAAATGTGT----TTATACAGTTAGGCGTGTGGATTCGGCCACGTGCGGTGT-GGT----GTCT---GT---------------AGGATTGTTCTTGAG--TG---------------------------TG
droRho1 scf7180000776850:275440-275681 + ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAGTCCGGTAAGGATTTTTCATATAAAAATAAACGAAAAATGCGTGAATTGATCAGCAAAAGCAAGCCGAATGCAGGGCCTACAAGCGGGAAATCAAAAA--A--GTGCGGAATATTGCGATTTTAAGGCAGAAATGTGT----TTATACTGATGGCC-GATAGTTTCGGCCACGTGCGGTGT-ATC-----TCT---AT---------------AGGATTGCTTG--AG--TG---------------------------TG
droBia1 scf7180000302428:8352912-8353148 - ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATACAAAAATAGGCGAAAAATGCGTGAATTGATCAGCAAAAGCAAGGCGAAAACAGGGACTACCAGTGGGAATTGAATAT--T--GTGCGGAATTTAGCGATTTTAAGGCAGAAACGCGT----TCAAGCAGACGACC-TGTAGTTTC-GCCACGTGCGGTGT-GTC-----TGC---GT---------------GGAAATGCTTA--A---------------------------------G
droTak1 scf7180000415095:101146-101407 + ATTTCGTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTACATACAAAAGTGGGCGAAAAATGCGTGAATTGATCAGCAAAAGCAAGGCAAAAGCGTGGGCCACCAGTGGGAAATGAAAAT--T--GTGCATTTACAACCGATTTTAAGGCGAAAATGTGT----TGAAACCGTTGACC-CGAAGTTTCGGCCACGTGCGTGGT-A---------------------------AAG---TGTGCCAA--AG--TGTGTGTCTTAAACTATAAAGTAAACTAAAA
droEug1 scf7180000409007:489256-489497 - ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATACAAAAATAAGACAAAATTTCGTGAATTGATCAGCAAATGCAAGGCGAAAGCACAGACCACAAGCGGGAAATCAAAAA--T--ACTCATAAAACCGTGATTTTAAGGCAAAAATCTCA----TTAAACAGTTGACC-TGTAGTTTCGGCCACGTGCGGTGT-TTC-----TGC---GT---------------GTGAATGCTAA--AG--TG---------------------------TG
dm3 chr3L:1668391-1668645 - ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATTCAAAAATATGCGAAAAATGCGTGAATCGATCAGCAAAAGGGAGACGACAGCTCAGCCCACCAGAAGGCAATCGAATT--T--GTGCGAAATATTGTGATTTTAAGGCATAAATGTGT----TCGAACAGATAATC-CGTAGTTTCGGCCACGTGCGGTGT-GTC-----TGC---GT---------------GGGAATGTCCA--AG--TGTGTGTTCAGA--------------ATGGG
droSim2 3l:1578300-1578554 - dsi_3764 ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATTCAAAAATATGCGAAAAATGCGTGAATCGATCAGCAAAAGGAAGGCGACAGCTCAGCCCATCAGAGGGCAATCGAATT--T--GTGCGAAATATTGTGATTTTAAGGCATAAATGTGT----TCGAACAGATAATC-CATAGTTTCGGCCACGTGCGGTGT-GTC-----TGC---GT---------------GGTAATGTACA--AG--TGTGTGTTTAGA--------------ATGGG
droSec2 scaffold_2:1694857-1695096 - ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATTCAAAAATATGCGAAAAATGCGTGAATCGATCAGCAAAATGGAGGCGACAGCTCAGCCCATCAGAGGGCAATCGAATT--T--GTGCGAAATATTGTGATTTTAAGGCATAAATGTGT----TCGAACAGATAATC-CATAGTTTCGGCCACGTGCGGTGT-GTC-----TGC---GT---------------GGTAATGTACA--AG-------------------------------TG
droYak3 3L:1619164-1619402 - ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATTCAAAAATAAGCGAAAAATGCGTGAATCGATCAGCAAAAGCGAGGCGACAGCACGGCCCACCAGCGGGCAATCGAAAT--T--GTGCGGAATATCGCGTTTTTAAGCCAAAAATGTGT----TCAAACTGATAGCC-CGTAGTTTC-GCCACGTGCGGTGT-GTC-----TGC---GT---------------GGGAATGTCCA------TG---------------------------TG
droEre2 scaffold_4784:1647903-1648144 - ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATTCAAAAATAGGCGAAAAATTCGTGAATCGATCAGCAAAAGCGAGGCGACAGCATGGCCCACCAGCAGGCCATCGAAAT--T--GTGCGGAATATCGCGACTTTAAGGCAAAAATGTGT----TCGAACAGATAACC-CGTAGTTTCGGCCACGTGCGGTGT-GTC-----TGC---GT---------------GGAAATGTCCA--AG--TG---------------------------TG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATTTCTTTTTCTCGTAGAAATGCCACCTAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATATAAAAATGTCTAAAAAATGTGTGGTTTTGTCATCAGCAGCAAGGTTAAAGCAAGCACAATGCACGGATATATGTAGAAAT----GTGTTAAAATAAGAATTTCAAGCAAATATAACA----GAAAATGTTTCGCC--AT-ATTTGCGCCACGTGCGGTGT-GGC-----TGC---GACTCGGCATTGAAAAC---AATTTAC---AA--CG---------------------------CGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................ATGCCACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2517.007004100000000001000000010000000000000000000000000000000000000000
....CTTTTTCTCGTAGAAATGCCACCT......................................................................................................................................................................................................................................................................................2415.005011300000000000000000000000000000000000000000000000000000000000
............CGTAGAAATGCCACCTAAAAAGC...............................................................................................................................................................................................................................................................................2313.003000200000000000000000000000000000001000000000000000000000000000
........................ACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2013.003002000000000000001000000000000000000000000000000000000000000000
...........TCGTAGAAATGCCACCT......................................................................................................................................................................................................................................................................................1712.002000000000000000000000000000000000000000000000000000000000110000
...................ATGCCACCTAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2012.002001000000000000100000000000000000000000000000000000000000000000
....CTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2012.002000200000000000000000000000000000000000000000000000000000000000
.......TTTCTCGTAGAAATGCCACCTAAAAAGCC..............................................................................................................................................................................................................................................................................2912.002000100000000000000000000000000000000000000000000000000001000000
...................ATGCCACCTAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2412.002001100000000000000000000000000000000000000000000000000000000000
............CGTAGAAATGCCACCTAAAA..................................................................................................................................................................................................................................................................................2012.002001000000000000000000000000000001000000000000000000000000000000
............CGTAGAAATGCCACCTAAAAAGCC..............................................................................................................................................................................................................................................................................2412.002000200000000000000000000000000000000000000000000000000000000000
............CGTAGAAATGCCACCTAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2712.002001100000000000000000000000000000000000000000000000000000000000
..........CTCGTAGAAATGCCACCTAAA...................................................................................................................................................................................................................................................................................2112.002000100000000000001000000000000000000000000000000000000000000000
...........TCGTAGAAATGCCACCTAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................3212.002000000000000000000000000000000000000000000000000000000011000000
..........CTCGTAGAAATGCCACCTAAAAAGC...............................................................................................................................................................................................................................................................................2512.002000200000000000000000000000000000000000000000000000000000000000
....CTTTTTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
.....................GCCACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2312.002001000000000000000000010000000000000000000000000000000000000000
..........CTCGTAGAAATGCCACCT......................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000000000000000000001000000000000100000
..............................AAAGCCAACCGAGAAATCC.................................................................................................................................................................................................................................................................1912.002001000000000000001000000000000000000000000000000000000000000000
............CGTAGAAATGCCACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................3212.002000000000000000000000000000000000000000000000000000000000110000
...................ATGCCACCTAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
...TCTTTTTCTCGTAGAAATGCCACCT......................................................................................................................................................................................................................................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
........TTCTCGTAGAAATGCCACCTAA....................................................................................................................................................................................................................................................................................2212.002000100000000000100000000000000000000000000000000000000000000000
.................AAATGCCACCTAAAAAGCC..............................................................................................................................................................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
....CTTTTTCTCGTAGAAATGCCACCTAAAA..................................................................................................................................................................................................................................................................................2812.002000100000000000000000000000000000000000000000000000000000100000
...................ATGCCACCTAAAAAGCCAACCG.........................................................................................................................................................................................................................................................................2212.002000000000000000000000010000000000000000000000000000000000000010
.....TTTTTCTCGTAGAAATGCCACCTAAAA..................................................................................................................................................................................................................................................................................2712.002000000000000000000000000000000000000000000000000000000010010000
..........CTCGTAGAAATGCCACCTAAAAAGCC..............................................................................................................................................................................................................................................................................2612.002001000000000000000000000000000000000100000000000000000000000000
........TTCTCGTAGAAATGCCACCTAAAA..................................................................................................................................................................................................................................................................................2412.002000000000000000002000000000000000000000000000000000000000000000
..TTCTTTTTCTCGTAGAAATG............................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
......TTTTCTCGTAGAAATGCCACCTAA....................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000100
........TTCTCGTAGAAATGCCACCTA.....................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............CGTAGAAATGCCACCTAAA...................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................GAAATGCCACCTAAAAAGCC..............................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........TCTCGTAGAAATGCCACCTAA....................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...TCTTTTTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
.........................CCTAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
.............GTAGAAATGCCACCTAAAAAGC...............................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.......................CACCTAAAAAGCCAACCG.........................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
...........................TAAAAAGCCAACCGAGAAATCCGCA..............................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
........TTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
............CGTAGAAATGCCACCT......................................................................................................................................................................................................................................................................................1611.001000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................CTCGGCATTGAAAAC---AATTTA.......................................2111.001000000000000000000000000000000000000000000000000000000000000100
.......TTTCTCGTAGAAATGCCACCTAAAA..................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.TTTCTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.....................GCCACCTAAAAAGCCAACCGAGAAATC..................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
................................AGCCAACCGAGAAATCCG................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
...........................TAAAAAGCCAACCGAGAAATC..................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
...........TCGTAGAAATGCCACCTAAAAAGCC..............................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000100000
.....TTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
........TTCTCGTAGAAATGCCACCTAAAAAGC...............................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........TCGTAGAAATGCCACCTAAAAAGCCAACCG.........................................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000010000000000000000
...............................AAGCCAACCGAGAAATCC.................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
........................ACCTAAAAAGCCAACCGAGAAATCCGC...............................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.........TCTCGTAGAAATGCCACCTAAAAAGC...............................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.......TTTCTCGTAGAAATGCCACCT......................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..TTCTTTTTCTCGTAGAAATGCCACCT......................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000010000
....CTTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...............AGAAATGCCACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000100000000
.......TTTCTCGTAGAAATGCCACCTAAA...................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...............AGAAATGCCACCTAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
......TTTTCTCGTAGAAATGCCACCT......................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000010000000000000000000
.......TTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
..TTCTTTTTCTCGTAGAAATGCCAC........................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
ATTTCTTTTTCTCGTAGAAATGCCA.........................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...............AGAAATGCCACCTAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2411.001000000000000000000000000100000000000000000000000000000000000000
..................AATGCCACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................AATGTCTAAAAAATGTGTGGTC......................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................TAACA----GAAAATGTTTCGCC--AT-....................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
......TTTTCTCGTAGAAATGCCACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................3811.001000000000000000000000000000000000000000000000000000000000010000
.......................CACCTAAAAAGCCAACCGAGAAATCCGC...............................................................................................................................................................................................................................................................2811.001000000000000000000000000100000000000000000000000000000000000000
........TTCTCGTAGAAATGCCACCT......................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
...............AGAAATGCCACCTAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
...............................AAGCCAACCGAGAAATCCGC...............................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
...............................AAGCCAACCGAGAAATCCGCA..............................................................................................................................................................................................................................................................2121.002000000000000000001000000010000000000000000000000000000000000000
...........TCGTAGAAATGCCACCTAAA...................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000010000000
..TTCTTTTTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
...TCTTTTTCTCGTAGAAATGCCAC........................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................GTGCGGTGT-GGC-----TGC---GACTCGGCA........................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................AAATGCCACCTAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................CCAACCGAGAAATCCGGTAAGGAT........................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
..........................CTAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............GTAGAAATGCCACCTAAAAA.................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......TTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000010000000
.............GTAGAAATGCCACCTAAAAAGCC..............................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000010000
....CTTTTTCTCGTAGAAATGCCACCTAAA...................................................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
..TTCTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.....TTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................TAAAAAGCCAACCGAGAAA....................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...................ATGCCACCTAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
........TTCTCGTAGAAATGCCACCTAAA...................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
........................ACCTAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
....CTTTTTCTCGTAGAAATGCCACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................4011.001000000000000000000000000000000000000000000000000000000000100000
.......................CACCTAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
...................ATGCCACCTAAAAAGCCAA............................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................CCACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
..........CTCGTAGAAATGCCACCTAAAA..................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
...TCTTTTTCTCGTAGAAATGCCA.........................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................AGCCAACCGAGAAATCCGC...............................................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
..........CTCGTAGAAATGCCACCTAAAAA.................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000010000000
..............................................................................AAAAATGTGTGGTTTTGTCAT...............................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................ATATATGTAGAAAT----GTGTTAAA....................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
................................AGCCAACCGAGAAATCCGCA..............................................................................................................................................................................................................................................................2020.501000000000000000010000000000000000000000000000000000000000000000
droMoj3
ATTTCTTTTTCTCGTAGAAATGCCACCTAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATATAAAATTATATCGAAAATATGTGGTTTTGTCACCTAATTCAAAGTCAAAGCAAGCTGAATGCAATGCAGCATGTGGAAAT----GTGTTTAATTACAAATTTAACGCAAAATATACA----CAAAATGTGTCGCC--AT-ATTTGCGCCACGTGCGGTGT-GGC-----TGC---GACTCACCATTAAAAAC---AATGGTC------------------------------------AASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................CACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2116.006401001
....CTTTTTCTCGTAGAAATGCCAC........................................................................................................................................................................................................................................................................................2213.003300000
........TTCTCGTAGAAATGCCACCTAAAA..................................................................................................................................................................................................................................................................................2412.002200000
...................ATGCCACCTAAAAAGCCAACCG.........................................................................................................................................................................................................................................................................2212.002101000
....CTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2012.002200000
....CTTTTTCTCGTAGAAATGCCACCTAAAA..................................................................................................................................................................................................................................................................................2812.002100100
...TCTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2112.002200000
.....................GCCACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2312.002100001
.........TCTCGTAGAAATGCCACCTAAAA..................................................................................................................................................................................................................................................................................2311.001100000
.......................CACCTAAAAAGCCAACCGAGAAATCCGCA..............................................................................................................................................................................................................................................................2911.001100000
.................AAATGCCACCTAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2611.001100000
...................ATGCCACCTAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2011.001100000
......TTTTCTCGTAGAAATGCCACCTAA....................................................................................................................................................................................................................................................................................2411.001010000
.....................GCCACCTAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2111.001100000
..................AATGCCACCTAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2411.001100000
....CTTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2311.001100000
...............AGAAATGCCACCTAAAAAGC...............................................................................................................................................................................................................................................................................2011.001100000
...................ATGCCACCTAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2411.001000001
........................ACCTAAAAAGCCAACCGAGAAATC..................................................................................................................................................................................................................................................................2411.001100000
..................................CCAACCGAGAAATCCGGTAAGGATTT......................................................................................................................................................................................................................................................2611.001000010
.....TTTTTCTCGTAGAAATGCCACCTAAAA..................................................................................................................................................................................................................................................................................2711.001100000
...........TCGTAGAAATGCCACCTAAAAAGC...............................................................................................................................................................................................................................................................................2411.001100000
..........................CTAAAAAGCCAACCGAGAAAT...................................................................................................................................................................................................................................................................2111.001100000
ATTTCTTTTTCTCGTAGAA...............................................................................................................................................................................................................................................................................................1911.001100000
...................ATGCCACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2511.001000010
.......TTTCTCGTAGAAATGCCACCT......................................................................................................................................................................................................................................................................................2111.001100000
................GAAATGCCACCTAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2611.001100000
ATTTCTTTTTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................2311.001100000
........TTCTCGTAGAAATGCCACCTA.....................................................................................................................................................................................................................................................................................2111.001100000
..TTCTTTTTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................2111.001100000
.............GTAGAAATGCCACCTAAAAAGCC..............................................................................................................................................................................................................................................................................2311.001100000
..........................CTAAAAAGCCAACCGAGAAATCCGC...............................................................................................................................................................................................................................................................2511.001100000
...........................TAAAAAGCCAACCGAGAAATCC.................................................................................................................................................................................................................................................................2211.001100000
...............AGAAATGCCACCTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2911.001100000
.......................CACCTAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2011.001100000
...................ATGCCACCTAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2611.001100000
......TTTTCTCGTAGAAATGCCACCTAAA...................................................................................................................................................................................................................................................................................2511.001100000
...............................AAGCCAACCGAGAAATCCG................................................................................................................................................................................................................................................................1911.001000100
.................................GCCAACCGAGAAATCCGGTAAG...........................................................................................................................................................................................................................................................2211.001100000
..............TAGAAATGCCACCTAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2511.001100000
........................ACCTAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2111.001100000
..........................CTAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................1911.001000010
.........................CCTAAAAAGCCAACCGAGAAATCCG................................................................................................................................................................................................................................................................2511.001000001
......TTTTCTCGTAGAAATGCCACCT......................................................................................................................................................................................................................................................................................2211.001100000
.....TTTTTCTCGTAGAAATGCCAC........................................................................................................................................................................................................................................................................................2111.001100000
................................AGCCAACCGAGAAATCCGCA..............................................................................................................................................................................................................................................................2020.501000100
droGri2
ATTTCTTTTTCTCGTAGAAATGCCACCTAAAAAGCCAACCGAGAAGTCCGGTAAGCATTTTTCATATAAAAATGCCATAAAAATGTGTGAATTAAACACCAAACGCTAAACTAATACATGGCCAATGTGCAGCAACGTGTAGAAAT----GTGTGAAAGCAAGAATTTCTAGCAAAAATAATG----CCAAATATGTAGCC--AT-GTTTGCGCCACGTGCGGCAA-A---------------------------AAC---AATAAAA---AATGTGTATGCCATAAA-TGCAGTGTGTGCCTGTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................AAAGCCAACCGAGAAGTCC.................................................................................................................................................................................................................................................................1912.00220
.............GTAGAAATGCCACCTAAAAAGCCAA............................................................................................................................................................................................................................................................................2511.00110
.............................AAAAGCCAACCGAGAAGTCC.................................................................................................................................................................................................................................................................2011.00101
............CGTAGAAATGCCACCTAAAA..................................................................................................................................................................................................................................................................................2011.00110
..........................CTAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................1811.00110
........................ACCTAAAAAGCCAACCGAGAAGTCCG................................................................................................................................................................................................................................................................2611.00110
................GAAATGCCACCTAAAAAGCC..............................................................................................................................................................................................................................................................................2011.00110
.............GTAGAAATGCCACCTAAAAA.................................................................................................................................................................................................................................................................................2011.00110
................GAAATGCCACCTAAAAAGC...............................................................................................................................................................................................................................................................................1911.00110
.............................AAAAGCCAACCGAGAAGTC..................................................................................................................................................................................................................................................................1911.00101
..................AATGCCACCTAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2111.00110
.................AAATGCCACCTAAAAAGCCA.............................................................................................................................................................................................................................................................................2011.00110
..........CTCGTAGAAATGCCACCTAAAAAGCCA.............................................................................................................................................................................................................................................................................2711.00110
.................AAATGCCACCTAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2311.00110
................GAAATGCCACCTAAAAAGCCAACCG.........................................................................................................................................................................................................................................................................2511.00110
droWil2
ATTTCTTTTTCTCGTAGAAATGCCAGCTAAAAAGCCAGCCGAAAAATCCGGTGAGATAATTTAATAGAATTTTTAACAAAAAAAGTGTGAAAACAATACCAAATGAAAGGTTAAAGCAAGTGCTGTGCGTGGATATTAACAGAAAT----GTGTAAAAGCATTAATTTATCTGCAAAATACAA----TAAAATGTTTCGCC--AT-GTAT-GGCCACGTGCGAAGA-A---------------------------GAC----ATCTTTT--GG--CG---------------------------TASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............CGTAGAAATGCCAGCTAAAAA.................................................................................................................................................................................................................................................................................2116.00601140
............CGTAGAAATGCCAGCTAAAA..................................................................................................................................................................................................................................................................................2014.00400130
...................ATGCCAGCTAAAAAGCCAGC...........................................................................................................................................................................................................................................................................2013.00301110
................................AGCCAGCCGAAAAATCCGC...............................................................................................................................................................................................................................................................1913.00300030
....CTTTTTCTCGTAGAAATGCCAGC.......................................................................................................................................................................................................................................................................................2313.00300030
...TCTTTTTCTCGTAGAAATGCCAGCTAAAA..................................................................................................................................................................................................................................................................................2913.00303000
..........................CTAAAAAGCCAGCCGAAAAATCCGC...............................................................................................................................................................................................................................................................2513.00300030
.......TTTCTCGTAGAAATGCCAGC.......................................................................................................................................................................................................................................................................................2012.00200020
............................AAAAAGCCAGCCGAAAAATCCGC...............................................................................................................................................................................................................................................................2312.00200020
.......TTTCTCGTAGAAATGCCAGCTAAAA..................................................................................................................................................................................................................................................................................2512.00200020
......TTTTCTCGTAGAAATGCCAGCTAAAA..................................................................................................................................................................................................................................................................................2612.00201010
....CTTTTTCTCGTAGAAATGCCAGCTAAAA..................................................................................................................................................................................................................................................................................2812.00200020
..............TAGAAATGCCAGCTAAAA..................................................................................................................................................................................................................................................................................1812.00200020
....................TGCCAGCTAAAAAGCCAGCCGAAAAATC..................................................................................................................................................................................................................................................................2812.00202000
.................................GCCAGCCGAAAAATCCGC...............................................................................................................................................................................................................................................................1812.00200020
...............................AAGCCAGCCGAAAAATCCGC...............................................................................................................................................................................................................................................................2012.00201010
................................AGCCAGCCGAAAAATCCGCC..............................................................................................................................................................................................................................................................2012.00200020
...........................TAAAAAGCCAGCCGAAAAATCCGC...............................................................................................................................................................................................................................................................2412.00200020
............................AAAAAGCCAGCCGAAAAA....................................................................................................................................................................................................................................................................1811.00100010
............................AAAAAGCCAGCCGAAAAATCCGCCA.............................................................................................................................................................................................................................................................2511.00100001
..........CTCGTAGAAATGCCAGCT......................................................................................................................................................................................................................................................................................1811.00100010
............................AAAAAGCCAGCCGAAAAATCCGG...............................................................................................................................................................................................................................................................2311.00100001
...........TCGTAGAAATGCCAGCTAAAAAGCCAGCC..........................................................................................................................................................................................................................................................................2911.00101000
....CTTTTTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................1911.00100010
..TTCTTTTTCTCGTAGAAATGCCAGC.......................................................................................................................................................................................................................................................................................2511.00101000
..............TAGAAATGCCAGCTAAAAAG................................................................................................................................................................................................................................................................................2011.00100010
..TTCTTTTTCTCGTAGAAATGCCAGCTA.....................................................................................................................................................................................................................................................................................2711.00100010
...............AGAAATGCCAGCTAAAAA.................................................................................................................................................................................................................................................................................1811.00100010
.........TCTCGTAGAAATGCCAGCTAAAAA.................................................................................................................................................................................................................................................................................2411.00100010
...................ATGCCAGCTAAAAAGCCAG............................................................................................................................................................................................................................................................................1911.00100010
.................AAATGCCAGCTAAAAAGCC..............................................................................................................................................................................................................................................................................1911.00100010
..............TAGAAATGCCAGCTAAAAAGCCA.............................................................................................................................................................................................................................................................................2311.00100001
....................TGCCAGCTAAAAAGCCAGCCGAAAAA....................................................................................................................................................................................................................................................................2611.00101000
.....TTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................1911.00110000
............CGTAGAAATGCCAGCTAAAAAGCCAGC...........................................................................................................................................................................................................................................................................2711.00101000
...TCTTTTTCTCGTAGAAATGCCAGC.......................................................................................................................................................................................................................................................................................2411.00100010
...........................TAAAAAGCCAGCCGAAAA.....................................................................................................................................................................................................................................................................1811.00100010
........................AGCTAAAAAGCCAGCCGAA.......................................................................................................................................................................................................................................................................1911.00100010
..............TAGAAATGCCAGCTAAAAAGCCAGCCG.........................................................................................................................................................................................................................................................................2711.00101000
...........TCGTAGAAATGCCAGCTAAAAAGCCAGC...........................................................................................................................................................................................................................................................................2811.00101000
........................AGCTAAAAAGCCAGCCGA........................................................................................................................................................................................................................................................................1811.00100010
........TTCTCGTAGAAATGCCAGCTAAAAAGC...............................................................................................................................................................................................................................................................................2711.00101000
...............................AAGCCAGCCGAAAAATCCG................................................................................................................................................................................................................................................................1911.00100010
.....................GCCAGCTAAAAAGCCAGCCGAAAAAT...................................................................................................................................................................................................................................................................2611.00101000
.........................GCTAAAAAGCCAGCCGAAAAATC..................................................................................................................................................................................................................................................................2311.00100010
..TTCTTTTTCTCGTAGAAATGCCAGCT......................................................................................................................................................................................................................................................................................2611.00101000
.............................AAAAGCCAGCCGAAAAATCCGC...............................................................................................................................................................................................................................................................2211.00100010
....CTTTTTCTCGTAGAAATGCCAGCT......................................................................................................................................................................................................................................................................................2411.00100010
.......................CAGCTAAAAAGCCAGCCGAAA......................................................................................................................................................................................................................................................................2111.00100010
.....TTTTTCTCGTAGAAATGCCAGCTAAAA..................................................................................................................................................................................................................................................................................2711.00100010
..............TAGAAATGCCAGCTAAAAAGCCAGC...........................................................................................................................................................................................................................................................................2511.00101000
.................................GCCAGCCGAAAAATCCGCC..............................................................................................................................................................................................................................................................1921.00200020
............CGTAGAAATGCCAGCTAAAAAGCCAG............................................................................................................................................................................................................................................................................2611.00100010
....CTTTTTCTCGTAGAAATGCCAGCTA.....................................................................................................................................................................................................................................................................................2511.00101000
..........................CTAAAAAGCCAGCCGAAAA.....................................................................................................................................................................................................................................................................1911.00100010
.............GTAGAAATGCCAGCTAAAAA.................................................................................................................................................................................................................................................................................2011.00101000
..............................AAAGCCAGCCGAAAAATCCGCC..............................................................................................................................................................................................................................................................2211.00100010
........................AGCTAAAAAGCCAGCCGAAA......................................................................................................................................................................................................................................................................2011.00100010
..........CTCGTAGAAATGCCAGCTAAAAAGCC..............................................................................................................................................................................................................................................................................2611.00100010
.........................GCTAAAAAGCCAGCCGAAAAATCCGC...............................................................................................................................................................................................................................................................2611.00100010
....CTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2011.00100010
ATTTCTTTTTCTCGTAGAA...............................................................................................................................................................................................................................................................................................1911.00100010
............................AAAAAGCCAGCCGAAAAATC..................................................................................................................................................................................................................................................................2011.00100010
...........................TAAAAAGCCAGCCGAAAAATCC.................................................................................................................................................................................................................................................................2211.00100010
..........................CTAAAAAGCCAGCCGAAA......................................................................................................................................................................................................................................................................1811.00100010
.....TTTTTCTCGTAGAAATGCCAGCTA.....................................................................................................................................................................................................................................................................................2411.00100010
............CGTAGAAATGCCAGCTAAAAAGCCA.............................................................................................................................................................................................................................................................................2511.00100010
.........TCTCGTAGAAATGCCAGCT......................................................................................................................................................................................................................................................................................1911.00101000
...........................TAAAAAGCCAGCCGAAAAA....................................................................................................................................................................................................................................................................1911.00100010
.......TTTCTCGTAGAAATGCCAGCTAAAAAG................................................................................................................................................................................................................................................................................2711.00100010
......TTTTCTCGTAGAAATGCCAGC.......................................................................................................................................................................................................................................................................................2111.00100010
..........................CTAAAAAGCCAGCCGAAAAATCCG................................................................................................................................................................................................................................................................2411.00100010
............CGTAGAAATGCCAGCTAAAAAG................................................................................................................................................................................................................................................................................2211.00100010
..TTCTTTTTCTCGTAGAAATGCCAGCTAAA...................................................................................................................................................................................................................................................................................2911.00101000
.....TTTTTCTCGTAGAAATGCCA.........................................................................................................................................................................................................................................................................................2011.00100010
...................................................................................................................................................................................................TTCGCC--AT-GTAT-GGCCACGTGC.....................................................................................2211.00100010
.........TCTCGTAGAAATGCCAGCTAAAAAGCCAG............................................................................................................................................................................................................................................................................2911.00101000
........TTCTCGTAGAAATGCCAGCTA.....................................................................................................................................................................................................................................................................................2111.00100010
................................AGCCAGCCGAAAAATCCGCCA.............................................................................................................................................................................................................................................................2120.50100010
dp5
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACTGAGAAATCCGGTAAGGATTTTTCATATAAAAATCAGCTAAAAATGTGTGGATTTATCACCAAAAGCAATGCTAAAGCATGGATAATAATCAG-AAATAAAGAA--A--TTGCATTAAATCACGAATTTAAGGCAGAAAATAGT----TTAAAT-------------GTATTCGCCACGTGCGGTGT-GGC-----TGC---GTCCAACCACGGCCAAT---AA------------------------------------------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................ATGCCACCCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................2517.0070430000000
....................TGCCACCCAAAAAGCCAACTGAGAAA....................................................................................................................................................................................................................................................................2617.0070700000000
....CTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2415.0050311000000
.........TCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2615.0050300000200
..................AATGCCACCCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................2614.0040220000000
....................TGCCACCCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................2413.0030210000000
...TCTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2513.0030120000000
.............................AAAAGCCAACTGAGAAATCCGCC..............................................................................................................................................................................................................................................................2313.0030200100000
...............AGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2112.0020110000000
.....TTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2312.0020200000000
...............................AAGCCAACTGAGAAATCCGCC..............................................................................................................................................................................................................................................................2112.0020001100000
.........TCTCGTAGAAATGCCACCCAAAAAG................................................................................................................................................................................................................................................................................2512.0020200000000
..............TAGAAATGCCACCCAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2512.0020200000000
....CTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2512.0020200000000
..........CTCGTAGAAATGCCACCCAAAAAG................................................................................................................................................................................................................................................................................2412.0020200000000
....CTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2011.0010010000000
.............GTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2311.0010001000000
............................AAAAAGCCAACTGAGAAATCCGC...............................................................................................................................................................................................................................................................2311.0010100000000
................................AGCCAACTGAGAAATCCGCC..............................................................................................................................................................................................................................................................2011.0010000010000
........TTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2111.0010100000000
...................ATGCCACCCAAAAAGCCAACTG.........................................................................................................................................................................................................................................................................2211.0010000100000
..............TAGAAATGCCACCCAAAAAGCCAACTGA........................................................................................................................................................................................................................................................................2811.0010100000000
.........TCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2311.0010100000000
..........................CCAAAAAGCCAACTGAGAAATCCGCC..............................................................................................................................................................................................................................................................2611.0010100000000
........TTCTCGTAGAAATGCCACCCAAAAAG................................................................................................................................................................................................................................................................................2611.0010100000000
......TTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2111.0010100000000
....CTTTTTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2811.0010100000000
......TTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2311.0010010000000
......TTTTCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2911.0010010000000
.....................GCCACCCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................2311.0010000100000
..........CTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2511.0010100000000
........................ACCCAAAAAGCCAACTGAGAAATCCGCC..............................................................................................................................................................................................................................................................2811.0010001000000
.......TTTCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2811.0010100000000
......................CCACCCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................2211.0010100000000
........TTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2011.0010100000000
..TTCTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2611.0010100000000
..........CTCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2611.0010010000000
........TTCTCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2811.0010010000000
...................ATGCCACCCAAAAAGCCA.............................................................................................................................................................................................................................................................................1811.0010100000000
.TTTCTTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2611.0010100000000
.......................CACCCAAAAAGCCAACTGAGAAATCCGCC..............................................................................................................................................................................................................................................................2911.0010010000000
............CGTAGAAATGCCACCCAAAAAGCCAA............................................................................................................................................................................................................................................................................2611.0010100000000
..................AATGCCACCCAAAAAGCCAACTGAG.......................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................AGCAATGCTAAAGCATGGATG......................................................................................................................................................................................2111.0010100000000
..........CTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2211.0010010000000
...........TCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2411.0010100000000
....CTTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2311.0010010000000
........................ACCCAAAAAGCCAACTGAGAAATCCG................................................................................................................................................................................................................................................................2611.0010010000000
.......................CACCCAAAAAGCCAACTGAGAA.....................................................................................................................................................................................................................................................................2211.0010000100000
.........................CCCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................1911.0010100000000
.....................GCCACCCAAAAAGCCAACTGAGAA.....................................................................................................................................................................................................................................................................2411.0010010000000
...TCTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2611.0010100000000
...................ATGCCACCCAAAAAGCCAACTGAGAA.....................................................................................................................................................................................................................................................................2611.0010100000000
.................AAATGCCACCCAAAAAGCCAACTGAGAA.....................................................................................................................................................................................................................................................................2811.0010100000000
...............AGAAATGCCACCCAAAAAGCCA.............................................................................................................................................................................................................................................................................2211.0010100000000
.............................AAAAGCCAACTGAGAAATCC.................................................................................................................................................................................................................................................................2011.0010001000000
........TTCTCGTAGAAATGCCACCCAAAAAGCA..............................................................................................................................................................................................................................................................................2811.0010100000000
........................ACCCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................2011.0010100000000
............CGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2011.0010100000000
....................TGCCACCCAAAAAGCCAACTGAG.......................................................................................................................................................................................................................................................................2311.0010000100000
...........................................................................................................................................................AAATCACGAATTTAAGGCAG...................................................................................................................................2011.0010100000000
...............AGAAATGCCACCCAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2411.0010100000000
droPer2
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACTGAGAAATCCGGTAAGGATTTTTCATATAAAAATCAGCTAAAAATGTGTGGATTTATCACCAAAAGCAATGCTAAAGCATGGATAATAATCAG-AAATAAAGAA--A--TTGCATTAAATCACGAATTTAAGGCAGAAAATAGT----TTAAAT-------------GTATTCGCCACGTGCGGTGT-GGC-----TGC---GTCCAACCACGGCCAAC---AA------------------------------------------TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....CTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2419.009900000
........TTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2018.008800000
....CTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2517.007610000
....CTTTTTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2716.006600000
........TTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2415.005500000
..........CTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................1815.005500000
.......................CACCCAAAAAGCCAACTG.........................................................................................................................................................................................................................................................................1814.004400000
.............GTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2313.003300000
.............GTAGAAATGCCACCCAAAAAGCCAACT..........................................................................................................................................................................................................................................................................2713.003300000
.......TTTCTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2313.003300000
...................ATGCCACCCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................2513.003021000
.........TCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2213.003300000
..........CTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2212.002200000
........TTCTCGTAGAAATGCCACCCAAAAA.................................................................................................................................................................................................................................................................................2512.002200000
............CGTAGAAATGCCACCCAAAAAGCCAACT..........................................................................................................................................................................................................................................................................2812.002200000
.......TTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2212.002011000
........TTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................1912.002200000
..TTCTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2712.002200000
...........................................................................................................................................................AAATCACGAATTTAAGGCAGA..................................................................................................................................2111.001001000
..TTCTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2611.001010000
..........CTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2511.001010000
.....TTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2311.001100000
.............GTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................1911.001100000
..........................CCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................1811.001100000
...........TCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2111.001100000
............CGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2411.001100000
...........TCGTAGAAATGCCACCCAAAAAGCCAA............................................................................................................................................................................................................................................................................2711.001010000
.....................GCCACCCAAAAAGCCAACTGA........................................................................................................................................................................................................................................................................2111.001001000
.......TTTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2411.001100000
........TTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2111.001001000
....CTTTTTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2811.001100000
......TTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2211.001100000
.........TCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2611.001100000
.......TTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2011.001100000
............CGTAGAAATGCCACCCAAAAA.................................................................................................................................................................................................................................................................................2111.001100000
....................TGCCACCCAAAAAGCCAACTGA........................................................................................................................................................................................................................................................................2211.001001000
..................AATGCCACCCAAAAAGCCAACTG.........................................................................................................................................................................................................................................................................2311.001100000
...TCTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2511.001100000
....................TGCCACCCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................2411.001001000
....................TGCCACCCAAAAAGCCAACTGAGAA.....................................................................................................................................................................................................................................................................2511.001010000
...............................AAGCCAACTGAGAAATCCGCC..............................................................................................................................................................................................................................................................2111.001001000
..TTCTTTTTCTCGTAGAAA..............................................................................................................................................................................................................................................................................................1811.001100000
.......TTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2111.001100000
........TTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2311.001100000
.......................CACCCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................2111.001001000
...................ATGCCACCCAAAAAGCCAACTGA........................................................................................................................................................................................................................................................................2311.001001000
.....TTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2211.001001000
..................AATGCCACCCAAAAAGCCAACTGA........................................................................................................................................................................................................................................................................2411.001001000
...........TCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2011.001010000
........................ACCCAAAAAGCCAACTGAGA......................................................................................................................................................................................................................................................................2011.001001000
........TTCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2711.001010000
......TTTTCTCGTAGAAATGCCACCCAAAAA.................................................................................................................................................................................................................................................................................2711.001100000
...........TCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2511.001100000
..........CTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................1911.001100000
....CTTTTTCTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2611.001100000
.............GTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2211.001100000
....CTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2011.001100000
........TTCTCGTAGAAATGCCACCCAG....................................................................................................................................................................................................................................................................................2211.001100000
..........CTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2011.001100000
............CGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................1811.001100000
..........CTCGTAGAAATGCCACCCAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2911.001100000
....................TGCCACCCAAAAAGCCAACTGAGAAA....................................................................................................................................................................................................................................................................2611.001010000
..................AATGCCACCCAAAAAGCCAACTGAGAA.....................................................................................................................................................................................................................................................................2711.001000001
droAna3
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATACAAAAACTGCCCAAAATTAAGTGAATTGATCAGCAAATGCAACGCGAACAAAAGGGGAATCCGCTGCAGTACAAA----TGTGCCGTGGGAATAATGGATTTAAGCCAAAAATTGGC----TGAAATAGTTGACC--AT-GTCTGAGCCACGTGCG------TCTGGA-T----------------------ACCAA-----------------------------------------AASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................ATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................25121.00217131000
..................AATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2617.007151000
....................TGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2416.006312000
..........CTCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2615.005320000
.......................CACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2115.005050000
.....................GCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2314.004121000
............CGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2013.003030000
..........................CCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................1813.003021000
........TTCTCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2813.003120000
...........TCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2513.003120000
..................AATGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2212.002020000
........TTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2412.002020000
...................ATGCCACCCAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2312.002110000
..........CTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2212.002110000
.....TTTTTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2712.002020000
.............GTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2312.002110000
............CGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2412.002020000
..........CTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................1912.002200000
..TTCTTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2512.002020000
.......TTTCTCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2912.002020000
...................ATGCCACCCAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2612.002110000
....................TGCCACCCAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2312.002101000
....CTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2412.002020000
..........CTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2512.002020000
....CTTTTTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................1912.002020000
................GAAATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2812.002010001
..TTCTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2212.002020000
............CGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................1912.002110000
................GAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2012.002020000
...........TCGTAGAAATGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2912.002200000
........TTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2012.002002000
...................ATGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2111.001010000
........TTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2111.001010000
........................ACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2011.001010000
..............................AAAGCCAACCGAGAAATCCGCC..............................................................................................................................................................................................................................................................2211.001000001
......................CCACCCAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2111.001010000
...............................AAGCCAACCGAGAAATCCGCC..............................................................................................................................................................................................................................................................2111.001000001
..................AATGCCACCCAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2411.001100000
.....TTTTTCTCGTAGAAATGCCACCCAAAAA.................................................................................................................................................................................................................................................................................2811.001100000
....................TGCCACCCAAAAAGCCAACCGAGAAA....................................................................................................................................................................................................................................................................2611.001010000
...................ATGCCACCCAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2011.001010000
....CTTTTTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2711.001010000
...........TCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2011.001010000
.....................GCCACCCAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2411.001010000
........................ACCCAAAAAGCCAACCGAGAAATCCGCC..............................................................................................................................................................................................................................................................2811.001010000
.................AAATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2711.001010000
.............................AAAAGCCAACCGAGAAATC..................................................................................................................................................................................................................................................................1911.001010000
..TTCTTTTTCTCGTAGAAATGCCACCCAT....................................................................................................................................................................................................................................................................................2811.001100000
....................TGCCACCCAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2211.001010000
.......TTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2111.001010000
....................................AACCGAGAAATCCGGTAAGGGT........................................................................................................................................................................................................................................................2211.001000010
..............TAGAAATGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2611.001010000
.........TCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2611.001010000
.........TCTCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2711.001100000
...............AGAAATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2911.001010000
.........TCTCGTAGAAATGCCACCCAAAAA.................................................................................................................................................................................................................................................................................2411.001010000
.........TCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2311.001010000
.........TCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2011.001010000
...................ATGCCACCCAAAAAGCCAA............................................................................................................................................................................................................................................................................1911.001010000
..............................AAAGCCAACCGAGAAATC..................................................................................................................................................................................................................................................................1811.001010000
.........TCTCGTAGAAATGCCACCCAAAAAG................................................................................................................................................................................................................................................................................2511.001010000
.....TTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................1911.001010000
..........CTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2011.001010000
...TCTTTTTCTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2711.001010000
......TTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2311.001010000
...................ATGCCACCCAAAAAGCCAACCC.........................................................................................................................................................................................................................................................................2211.001100000
.......TTTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2511.001010000
....CTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2511.001010000
..................AATGCCACCCAAAAAGCCAACT..........................................................................................................................................................................................................................................................................2211.001010000
........TTCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2711.001010000
..TTCTTTTTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2911.001010000
....................TGCCACCCAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2511.001010000
......................CCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2211.001010000
........TTCTCGTAGAAATGCCACCCAAAAAG................................................................................................................................................................................................................................................................................2611.001010000
........................ACCCAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................1911.001001000
..TTCTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2711.001100000
.................................GCCAACCGAGAAATCCGG...............................................................................................................................................................................................................................................................1811.001000001
..........CTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2111.001010000
........TTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................1911.001010000
.........TCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................1911.001010000
......TTTTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2611.001100000
.......................CACCCAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2211.001010000
............CGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2311.001010000
...TCTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2511.001010000
..................AATGCCACCCAAAAAGCCA.............................................................................................................................................................................................................................................................................1920.501001000
.................AAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................1820.501100000
................................AGCCAACCGAGAAATCCGCC..............................................................................................................................................................................................................................................................2020.501000001
.................................GCCAACCGAGAAATCCGCC..............................................................................................................................................................................................................................................................1930.331000001
droBip1
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATACAAAAACTGACCAAAATTAAGTGAATTGATCAGCAAATGCAACGCGATTTAAAGGGGAACCTGCTGGTGTACAAA----TGTGCCGTGGGAATAATGGATTTAAGCCAAAAATTAGC----TGAAATAGTTGACC--AT-GTTTGAGCCACGTGCG------TCTGGA-T----------------------A------CCGA-----------------------------------AASizeHit CountTotal NormTotal
No Reads
droKik1
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATATAAAAATAGGCCTAAAATGTGTGGATTAATCAGCAAAAGCAAGGCGAACACCAGGCCAATGCGTGGAAATACGAAAG--T--GCGCAGAAAATTGTTAATTTAAGGCAGAATTGTGTGTTTTTAAGCG---AGCC-CG----ATGAGCCACGTGCGGTGGTGGC-----TGCAGCGTCTGAGCAGTTGT---GGGAA-----------------------------------------CASizeHit CountTotal NormTotal
No Reads
droFic1
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATATAAAAATAAGCGA-AAATGTGTGAATCGATGAGCAAAAGCAAGGCAAAACCAGAGGCTAACAATGGGATAACAAAAA--A--GTGCAGAAAATCACGGTTTTAAGGCAGAAATGTGT----TCAAACAGATGACC-CGTAGTTTCGGCCACGTGCAGTG---TC-----TGC---GT---------------GGGAACGCTTG--AG--TGTG-------------------------TGSizeHit CountTotal NormTotal
No Reads
droEle1
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATATAAAAATAAGCGTAAAATGCGTGAACTGATCAGCAAAAGCAAGCCGAAAGCAAGGGCCACAAGCGGGAAATCAAAAA--A--GTGCGGAATAAAGCGATTTTAGAGCAGAAATGTGT----TTATACAGTTAGGCGTGTGGATTCGGCCACGTGCGGTGT-GGT----GTCT---GT---------------AGGATTGTTCTTGAG--TG---------------------------TGSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAGTCCGGTAAGGATTTTTCATATAAAAATAAACGAAAAATGCGTGAATTGATCAGCAAAAGCAAGCCGAATGCAGGGCCTACAAGCGGGAAATCAAAAA--A--GTGCGGAATATTGCGATTTTAAGGCAGAAATGTGT----TTATACTGATGGCC-GATAGTTTCGGCCACGTGCGGTGT-ATC-----TCT---AT---------------AGGATTGCTTG--AG--TG---------------------------TGSizeHit CountTotal NormTotal
No Reads
droBia1
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATACAAAAATAGGCGAAAAATGCGTGAATTGATCAGCAAAAGCAAGGCGAAAACAGGGACTACCAGTGGGAATTGAATAT--T--GTGCGGAATTTAGCGATTTTAAGGCAGAAACGCGT----TCAAGCAGACGACC-TGTAGTTTC-GCCACGTGCGGTGT-GTC-----TGC---GT---------------GGAAATGCTTA--A---------------------------------GSizeHit CountTotal NormTotal
No Reads
droTak1
ATTTCGTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTACATACAAAAGTGGGCGAAAAATGCGTGAATTGATCAGCAAAAGCAAGGCAAAAGCGTGGGCCACCAGTGGGAAATGAAAAT--T--GTGCATTTACAACCGATTTTAAGGCGAAAATGTGT----TGAAACCGTTGACC-CGAAGTTTCGGCCACGTGCGTGGT-A---------------------------AAG---TGTGCCAA--AG--TGTGTGTCTTAAACTATAAAGTAAACTAAAASizeHit CountTotal NormTotal
No Reads
droEug1
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATACAAAAATAAGACAAAATTTCGTGAATTGATCAGCAAATGCAAGGCGAAAGCACAGACCACAAGCGGGAAATCAAAAA--T--ACTCATAAAACCGTGATTTTAAGGCAAAAATCTCA----TTAAACAGTTGACC-TGTAGTTTCGGCCACGTGCGGTGT-TTC-----TGC---GT---------------GTGAATGCTAA--AG--TG---------------------------TGSizeHit CountTotal NormTotal
No Reads
dm3
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGATTTTTCATTCAAAAATATGCGAAAAATGCGTGAATCGATCAGCAAAAGGGAGACGACAGCTCAGCCCACCAGAAGGCAATCGAATT--T--GTGCGAAATATTGTGATTTTAAGGCATAAATGTGT----TCGAACAGATAATC-CGTAGTTTCGGCCACGTGCGGTGT-GTC-----TGC---GT---------------GGGAATGTCCA--AG--TGTGTGTTCAGA--------------ATGGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
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Male-body		V084
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CME-W2		V086
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Ovary		V0882
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Ovary		V0892
Ovary		V090
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fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.......................CACCCAAAAAGCCAACCGAGAAATCCGG...............................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................ATTTTAAGGCATAAATGTGT----T......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TT--T--GTGCGAAATATTGTGATTTTAAGG......................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TGCGAAATATTGTGATTTTAAGGCA....................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................AAAGCCAACCGAGAAATCCG................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TGT----TCGAACAGATAATC-CGTAGTT.................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AATGTCCA--AG--TGTGTGTT.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTCTCGTAGAAATGCCACCCAAAAAG................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......TTTTCTCGTAGAAATGCCACCATC....................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCTTTTTCTCGTAGAAATG............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TCAGCCCACCAGAAGGCAATCGAA.....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGAAATGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CACCCAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ACCAGAAGGCAATCGAATT--.................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CACCCAAAAAGCCAACCGAGAAATCCGCC..............................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ACCGAGAAATCCGGTAAGGATT.......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CTTTTTCTCGTAGAAATGCCA.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AAAAGCCAACCGAGAAATCCGGTAA............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCCAAAAAGCCAACCGAGAAATCCGCC..............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GATTTTAAGGCATAAATGTGT----.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.....TTTTTCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AACAGATAATC-CGTAGTT.................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..................AATGCCACCCAAAAAGCCAACCGAGAAA....................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGTAGAAATGCCACCCAAAAAGCCA.............................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTTTCTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GCCAACCGAGAAATCCGGTAAGGA.........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTTCTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTTTCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................AATCGATCAGCAAAAGGGAG.....................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
............................................................................................................................................................................................................................CGGTGT-GTC-----TGC---GT---------------GGGAATG.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GATAATC-CGTAGTTTCGG.............................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..........CTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TGCCACCCAAAAAGCCAA............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................CGTAGTTTCGGCCACGTGCGGTGT-...............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATGCCACCCAAAAAGCCA.............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................GCGGTGT-GTC-----TGC---GT---------------GGGAC...........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................ATCGAATT--T--GTGCGAAATA....................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TGCGTGAATCGATCAGCAAAAGGG.......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................GTGT-GTC-----TGC---GT---------------GGGAATG.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........TTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................ATTTTAAGGCATAAATGTGT----TCGAAT.................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTCTCGTAGAAATGCCA.........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TC-----TGC---GT---------------GGGAATGTCCA--AG--TG.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
ATTTCTTTTTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCGTAGAAATGCCACCCAAAAAGCCAA............................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TGC---GT---------------GGGAATGTCCA--AG--TGTG...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................................................................................CGTGAATCGATCAGCAAAAGGGAG.....................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................AGAAGGCAATCGAATT--T--GTGCGAAATA....................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................................................................TGC---GT---------------GGGAATGTCCA--AG--TG.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
droSim2
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATTCAAAAATATGCGAAAAATGCGTGAATCGATCAGCAAAAGGAAGGCGACAGCTCAGCCCATCAGAGGGCAATCGAATT--T--GTGCGAAATATTGTGATTTTAAGGCATAAATGTGT----TCGAACAGATAATC-CATAGTTTCGGCCACGTGCGGTGT-GTC-----TGC---GT---------------GGTAATGTACA--AG--TGTGTGTTTAGA--------------ATGGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....CTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2416.00600600000000000000
..TTCTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2615.00500410000000000000
......TTTTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2615.00500120000200000000
..........CTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2215.00500500000000000000
..TTCTTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2515.00502210000000000000
........TTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2014.00401300000000000000
....CTTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2314.00402200000000000000
.......TTTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2513.00301000011000000000
........TTCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2713.00300100001100000000
.......TTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2013.00300300000000000000
.....TTTTTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................1813.00310200000000000000
..........CTCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2613.00300300000000000000
............CGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2013.00311100000000000000
..................AATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2613.00300010011000000000
.............GTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................1912.00201000000000100000
............CGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................1812.00220000000000000000
.....TTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................1912.00200110000000000000
..........CTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................1812.00200200000000000000
...................ATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2512.00200020000000000000
.........................................................................................................................................................AAATATTGTGATTTTAAGGCA....................................................................................................................................2112.00200000020000000000
..TTCTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2712.00200110000000000000
........TTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2312.00201100000000000000
.....................................................................................................................................................TGCGAAATATTGTGATTTTAAGGCATA..................................................................................................................................2712.00200000001100000000
....................TGCCACCCAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2512.00200000001010000000
.............GTAGAAATGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2712.00200200000000000000
..........CTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2112.00201100000000000000
.............GTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................1812.00200200000000000000
...TCTTTTTCTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2712.00201010000000000000
..........CTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................1912.00201100000000000000
......TTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2212.00210100000000000000
.....TTTTTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2712.00200000000000020000
.................................GCCAACCGAGAAATCCGG...............................................................................................................................................................................................................................................................1812.00200000200000000000
.....TTTTTCTCGTAGAAATGCCA.........................................................................................................................................................................................................................................................................................2012.00200200000000000000
.......TTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2112.00200100000000100000
....CTTTTTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2812.00200020000000000000
....CTTTTTCTCGTAGAAATG............................................................................................................................................................................................................................................................................................1822.00430000000001000000
..........................................................................................................AAGGCGACAGCTCAGCCC......................................................................................................................................................................................1811.00100001000000000000
...................ATGCCACCCAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2611.00100000000000100000
......TTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2111.00101000000000000000
.......................CACCCAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2211.00101000000000000000
.........................................................................ATGCGAAAAATGCGTGAATCG....................................................................................................................................................................................................................2111.00100010000000000000
................................AGCCAACCGAGAAATCCG................................................................................................................................................................................................................................................................1811.00100000100000000000
........TTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2111.00100100000000000000
..........................CCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................1811.00100000000000100000
.TTTCTTTTTCTCGTAGAAATG............................................................................................................................................................................................................................................................................................2111.00100000000001000000
.....TTTTTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2611.00100000001000000000
...........TCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................1811.00100100000000000000
.................................GCCAACCGAGAAATCCGGTAAGGGTT.......................................................................................................................................................................................................................................................2611.00100000000001000000
..............................AAAGCCAACCGAGAAATCCG................................................................................................................................................................................................................................................................2011.00100000100000000000
...TCTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2511.00100000000010000000
........TTCTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2211.00100100000000000000
..........................................................................................ATCGATCAGCAAAAGGAAGGC...................................................................................................................................................................................................2111.00110000000000000000
........................ACCCAAAAAGCCAACCGAGAAATCCGC...............................................................................................................................................................................................................................................................2711.00100010000000000000
....................TGCCACCCAAAAAGCCAACCGAGAAA....................................................................................................................................................................................................................................................................2611.00100000000000010000
........................................GAGAAATCCGGTAAGGGTT.......................................................................................................................................................................................................................................................1911.00100000000001000000
....CTTTTTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2711.00100010000000000000
....................TGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2411.00100000001000000000
..................................................................................................................................................................................................................CGGCCACGTGCGGTGT-GT.............................................................................1811.00100001000000000000
..........CTCGTAGAAATGCCACCCAAAAA.................................................................................................................................................................................................................................................................................2311.00100000000000100000
....CTTTTTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................1911.00101000000000000000
.............GTAGAAATGCCACCCAAAAA.................................................................................................................................................................................................................................................................................2011.00110000000000000000
................................AGCCAACCGAGAAATCCGGC..............................................................................................................................................................................................................................................................2011.00100000000000100000
...............................AAGCCAACCGAGAAATCC.................................................................................................................................................................................................................................................................1811.00100000100000000000
..........CTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2511.00100010000000000000
..........CTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2011.00100000000000100000
.........TCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2311.00100100000000000000
.....TTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2311.00100100000000000000
......TTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................1811.00100100000000000000
......TTTTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2511.00100000001000000000
.TTTCTTTTTCTCGTAGAA...............................................................................................................................................................................................................................................................................................1811.00100010000000000000
........TTCTCGTAGAAATGCCACCCAAAAAGCCAAC...........................................................................................................................................................................................................................................................................3111.00100000001000000000
.......TTTCTCGTAGAAATGCCACCCAAAAAG................................................................................................................................................................................................................................................................................2711.00100000001000000000
.............GTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2311.00100100000000000000
....CTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2511.00100100000000000000
.................................GCCAACCGAGAAATCC.................................................................................................................................................................................................................................................................1611.00100000000001000000
........TTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................1511.00100000010000000000
...........................CAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................1711.00100000010000000000
.............................AAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................1511.00100000001000000000
.....TTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2211.00100100000000000000
..TTCTTTTTCTCGTAGAAATGCCA.........................................................................................................................................................................................................................................................................................2311.00110000000000000000
.........TCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................1911.00100100000000000000
.....................................ACCGAGAAATCCGGTAAGGGTT.......................................................................................................................................................................................................................................................2211.00100000000001000000
..............................................................................................................................................................................................................................GTGT-GTC-----TGC---GT---------------GGTAATG.........................................1911.00100000000001000000
........................ACCCAAAAAGCCAACCG.........................................................................................................................................................................................................................................................................1711.00100000000001000000
.........................CCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................1911.00100000010000000000
.......TTTCTCGTAGAAATGCCACCCAAAG..................................................................................................................................................................................................................................................................................2511.00100100000000000000
....CTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2011.00100010000000000000
.........................CCCAAAAAGCCAACCGAGAAATCCGC...............................................................................................................................................................................................................................................................2611.00100010000000000000
............CGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................1611.00100000000001000000
...............................................................................................................................AGAGGGCAATCGAATT--T--GTGA..........................................................................................................................................................2111.00100000000000001000
....CTTTTTCTCGTAGAAATGCCACCCAAAAAG................................................................................................................................................................................................................................................................................3011.00100000010000000000
...TCTTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2411.00100100000000000000
...................ATGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2111.00100001000000000000
......TTTTCTCGTAGAAATGCCA.........................................................................................................................................................................................................................................................................................1911.00100000000001000000
............CGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2411.00100100000000000000
.........TCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................1811.00100100000000000000
.....TTTTTCTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2511.00100000010000000000
................GAAATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2811.00100010000000000000
.......TTTCTCGTAGAAATGCCACCCAAAAA.................................................................................................................................................................................................................................................................................2611.00100000001000000000
...............AGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2111.00100000000000100000
......TTTTCTCGTAGAAATA............................................................................................................................................................................................................................................................................................16100.10100000000100000000
droSec2
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATTCAAAAATATGCGAAAAATGCGTGAATCGATCAGCAAAATGGAGGCGACAGCTCAGCCCATCAGAGGGCAATCGAATT--T--GTGCGAAATATTGTGATTTTAAGGCATAAATGTGT----TCGAACAGATAATC-CATAGTTTCGGCCACGTGCGGTGT-GTC-----TGC---GT---------------GGTAATGTACA--AG-------------------------------TGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................ATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................25116.001620140
..................AATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2618.0080080
.......................CACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2114.0040031
...................ATGCCACCCAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2313.0030030
........................ACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2013.0030030
..................AATGCCACCCAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2412.0020020
....CTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2512.0020020
....................TGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2412.0020020
.........................CCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................1912.0020020
.....................GCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2312.0020020
..................AATGCCACCCAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2512.0020020
...................ATGCCACCCAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2612.0020020
..........................CCAAAAAGCCAACCGAGAAATCCG................................................................................................................................................................................................................................................................2411.0010100
.....................................ACCGAGAAATCCGGTAAGGGTTT......................................................................................................................................................................................................................................................2311.0010010
...............................................................................................................................................................................................................................TGT-GTC-----TGC---GT---------------GGTAATG.........................................1811.0010001
.................................GCCAACCGAGAAATCCGGTAAGGGTT.......................................................................................................................................................................................................................................................2611.0010001
.......................................CGAGAAATCCGGTAAGGGTTTTT....................................................................................................................................................................................................................................................2311.0010001
.TTTCTTTTTCTCGTAGAAA..............................................................................................................................................................................................................................................................................................1911.0011000
.....................GCCACCCAAAAAGCCAACCG.........................................................................................................................................................................................................................................................................2011.0010010
..........CTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................1911.0010010
........TTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2011.0010010
............CGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2011.0010010
............CGTAGAAATGCCACCCAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2711.0010010
........TTCTCGTAGAAATGCCACCCAAAAAG................................................................................................................................................................................................................................................................................2611.0010010
.................................GCCAACCGAGAAATCCGGTAAGGGT........................................................................................................................................................................................................................................................2511.0010001
................................AGCCAACCGAGAAATCCGGTAAGGGTT.......................................................................................................................................................................................................................................................2711.0010001
............CGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2311.0010010
...................ATGCCACCCAAAAAGCCAACCG.........................................................................................................................................................................................................................................................................2211.0010010
.................................GCCAACCGAGAAATCCGGTAAGGG.........................................................................................................................................................................................................................................................2411.0010001
..................................................................................................................................................................GATTTTAAGGCATAAATG..............................................................................................................................1811.0010001
..........................CCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................1811.0010010
.......................CACCCAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2011.0010010
.....................................ACCGAGAAATCCGGTAAGG..........................................................................................................................................................................................................................................................1911.0011000
................................AGCCAACCGAGAAATCCGGTAAGGGT........................................................................................................................................................................................................................................................2611.0010001
................GAAATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2811.0010010
........................ACCCAAAAAGCCAACCGAGAAA....................................................................................................................................................................................................................................................................2211.0010010
............CGTAGAAATGCCACCCAAAAA.................................................................................................................................................................................................................................................................................2111.0010010
.......................................CGAGAAATCCGGTAAGGG.........................................................................................................................................................................................................................................................1811.0010001
.........TCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2011.0010010
............................AAAAAGCCAACCGAGAAATCCGC...............................................................................................................................................................................................................................................................2311.0010010
..TTCTTTTTCTCGTAGAAAT.............................................................................................................................................................................................................................................................................................1911.0010010
.......................................CGAGAAATCCGGTAAGGGTTT......................................................................................................................................................................................................................................................2111.0010001
.......................CACCCAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2211.0010010
......................CCACCCAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2011.0010010
............CGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................1911.0010010
................................AGCCAACCGAGAAATCCGCC..............................................................................................................................................................................................................................................................2030.3310010
droYak3
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATTCAAAAATAAGCGAAAAATGCGTGAATCGATCAGCAAAAGCGAGGCGACAGCACGGCCCACCAGCGGGCAATCGAAAT--T--GTGCGGAATATCGCGTTTTTAAGCCAAAAATGTGT----TCAAACTGATAGCC-CGTAGTTTC-GCCACGTGCGGTGT-GTC-----TGC---GT---------------GGGAATGTCCA------TG---------------------------TGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................ATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................25111.0011010100000000
.........................CCCAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................17110.0010000000000010
....................TGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2419.00906201000000
..................AATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2615.00504100000000
....CTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2414.00401300000000
.......TTTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2413.00321000000000
....CTTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2313.00310200000000
........TTCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2713.00302100000000
........TTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2413.00311100000000
.......................CACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2113.00302000010000
..TTCTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2613.00301200000000
..........CTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2512.00201100000000
.....................GCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2312.00200020000000
.........TCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2612.00201100000000
......TTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2212.00201100000000
....CTTTTTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2812.00220000000000
..................AATGCCACCCAAAAAGCCA.............................................................................................................................................................................................................................................................................1912.00201010000000
...............AGAAATGCCACCCAAAAAGCCAACCG.........................................................................................................................................................................................................................................................................2611.00101000000000
.............................................................................................................................................................................................................................GGTGT-GTC-----TGC---GT---------------GGGAATG.........................................2011.00100000010000
...TCTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2611.00101000000000
.........TCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2211.00110000000000
..................AATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................1811.00100100000000
.................AAATGCCACCCAAAAAGCCA.............................................................................................................................................................................................................................................................................2011.00101000000000
..........CTCGTAGAAATGCCACCCAAAAAG................................................................................................................................................................................................................................................................................2411.00101000000000
............CGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2311.00101000000000
............................................................................................................................................AAT--T--GTGCGGAATATCGCGTTTTTAAGCC.....................................................................................................................................2911.00100100000000
..................AATGCCACCCAAAAAGCCAAC...........................................................................................................................................................................................................................................................................2111.00101000000000
.................AAATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2711.00101000000000
..................................................................................................................................................................................................................C-GCCACGTGCGGTGT-GTC-----TGC---GT---------------GGGA............................................2711.00100000010000
.....................GCCACCCAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2111.00101000000000
ATTTCTTTTTCTCGTAGAA...............................................................................................................................................................................................................................................................................................1911.00101000000000
....................TGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2011.00100100000000
................GAAATGCCACCCAAAAAGCCA.............................................................................................................................................................................................................................................................................2111.00100010000000
..........CTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................1911.00100010000000
............................AAAAAGCCAACCGAGAAATCC.................................................................................................................................................................................................................................................................2111.00100010000000
........................ACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2011.00100100000000
...................ATGCCACCCAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2611.00101000000000
......TTTTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2611.00100100000000
...TCTTTTTCTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2711.00101000000000
....................TGCCACCCAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2311.00101000000000
....................TGCCACCCAAAAAGCCAACCG.........................................................................................................................................................................................................................................................................2111.00100000010000
....CTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2011.00100100000000
..............TAGAAATGCCACCCAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2811.00101000000000
.....TTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2311.00100100000000
..........CTCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2611.00100100000000
........................ACCCAAAAAGCCAACCGAGAAATCCGC...............................................................................................................................................................................................................................................................2711.00101000000000
........TTCTCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2811.00100100000000
................GAAATGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2411.00100100000000
.............................................................................GAAAAATGCGTGAATCGATCAGCA.............................................................................................................................................................................................................2411.00100000010000
..................AATGCCACCCAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2511.00101000000000
............................AAAAAGCCAACCGAGAAATC..................................................................................................................................................................................................................................................................2011.00100100000000
..TTCTTTTTCTCGTAGAAATGCC..........................................................................................................................................................................................................................................................................................2211.00100100000000
........TTCTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2211.00100100000000
.........TCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2011.00100010000000
.......TTTCTCGTAGAAATGCCACCCAAAAA.................................................................................................................................................................................................................................................................................2611.00110000000000
........TTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2111.00101000000000
........TTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................1911.00100100000000
....CTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2511.00101000000000
.......TTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2111.00100100000000
..............TAGAAATGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2611.00101000000000
...............................AAGCCAACCGAGAAATCCGGTAAGGG.........................................................................................................................................................................................................................................................2611.00100010000000
................................AGCCAACCGAGAAATCCGCC..............................................................................................................................................................................................................................................................2020.50100001000000
droEre2
ATTTCTTTTTCTCGTAGAAATGCCACCCAAAAAGCCAACCGAGAAATCCGGTAAGGGTTTTTCATTCAAAAATAGGCGAAAAATTCGTGAATCGATCAGCAAAAGCGAGGCGACAGCATGGCCCACCAGCAGGCCATCGAAAT--T--GTGCGGAATATCGCGACTTTAAGGCAAAAATGTGT----TCGAACAGATAACC-CGTAGTTTCGGCCACGTGCGGTGT-GTC-----TGC---GT---------------GGAAATGTCCA--AG--TG---------------------------TGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................AATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2615.0052200100
...................ATGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2514.0040102010
....CTTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2313.0030200010
.....................GCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2313.0031200000
..TTCTTTTTCTCGTAGAAATGC...........................................................................................................................................................................................................................................................................................2112.0020001010
...................ATGCCACCCAAAAAGCCAACCGAGAA.....................................................................................................................................................................................................................................................................2612.0020101000
........TTCTCGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2812.0021100000
.........................CCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................1912.0020101000
..................AATGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2212.0020200000
..TTCTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2712.0021001000
........TTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2111.0011000000
...TCTTTTTCTCGTAGAAATGCCAC........................................................................................................................................................................................................................................................................................2311.0011000000
.............GTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2311.0010000100
........................ACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2011.0010000100
....................TGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2011.0010100000
.....TTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2311.0011000000
............CGTAGAAATGCCACCCAAAAAGCC..............................................................................................................................................................................................................................................................................2411.0010000010
.......................CACCCAAAAAGCCAACCGAGAAATCCGC...............................................................................................................................................................................................................................................................2811.0010100000
..........CTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2511.0010000010
...........TCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2011.0011000000
..............................AAAGCCAACCGAGAAATCCGGT..............................................................................................................................................................................................................................................................2211.0010000010
..........................CCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................1811.0010000010
...................................................................................................................................................................................................ATAACC-CGTAGTTTCGGCCACGT.......................................................................................2311.0010000100
....................TGCCACCCAAAAAGCCAACCGAGAAA....................................................................................................................................................................................................................................................................2611.0011000000
...TCTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2511.0010100000
.......................CACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2111.0011000000
.............GTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................1811.0011000000
....................TGCCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2411.0010001000
..........CTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................1811.0010100000
.........TCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2011.0010001000
................................................................................................................................................................................................................................GT-GTC-----TGC---GT---------------GGAAATGTCCA--AG--T..............................2411.0010000010
........TTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2311.0011000000
....CTTTTTCTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2611.0011000000
.............GTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2211.0010001000
...................ATGCCACCCAAAAAGCCAACCGAGAAATC..................................................................................................................................................................................................................................................................2911.0011000000
..................AATGCCACCCAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2411.0010100000
..TTCTTTTTCTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2811.0011000000
........TTCTCGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2411.0011000000
..........CTCGTAGAAATGCCACCCAA....................................................................................................................................................................................................................................................................................2011.0010001000
....CTTTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2411.0010001000
....CTTTTTCTCGTAGAAATGCCACCCAAA...................................................................................................................................................................................................................................................................................2711.0011000000
....................TGCCACCCAAAAAGCCAACCG.........................................................................................................................................................................................................................................................................2111.0010001000
............CGTAGAAATGCCACCCAAAAAGCCAACC..........................................................................................................................................................................................................................................................................2811.0010100000
............CGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2311.0010001000
..TTCTTTTTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................2511.0010100000
........TTCTCGTAGAAATGCCACC.......................................................................................................................................................................................................................................................................................1911.0011000000
...................ATGCCACCCAAAAAGCCAACCGAG.......................................................................................................................................................................................................................................................................2411.0010000010
......TTTTCTCGTAGAAATGCCACCC......................................................................................................................................................................................................................................................................................2211.0010100000
........TTCTCGTAGAAATGCCACCCAAAAAGC...............................................................................................................................................................................................................................................................................2711.0010001000
.....................GCCACCCAAAAAGCCAACCGA........................................................................................................................................................................................................................................................................2111.0010001000
....CTTTTTCTCGTAGAAATGCCACCCA.....................................................................................................................................................................................................................................................................................2511.0010000010
...............................AAGCCAACCGAGAAATCCGC...............................................................................................................................................................................................................................................................2011.0010000010
............CGTAGAAATGCCACCCAAAA..................................................................................................................................................................................................................................................................................2011.0010001000
......................CCACCCAAAAAGCCAACCGAGA......................................................................................................................................................................................................................................................................2211.0010000010
...............................AAGCCAACCGAGAAATCCGCC..............................................................................................................................................................................................................................................................2120.5010000010

Generated: 05/19/2015 at 08:48 PM