ID:

dvi_17513

 Coordinate:

scaffold_13047:18462467-18462529 +

 Confidence:

candidate

 Class:

Mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.3 -11.2 -11.2

Flybase annnotation

intron [Dvir\GJ24648-in]; CDS [Dvir\GJ24648-cds]; CDS [Dvir\GJ24648-cds]

No Repeatable elements found

Sense Strand Reads

CAGGTGCTGGACGCGCTATTGGCCATCTCTGTGGTTATTCACACCCATTGGTAAGATGAACAATTCGAGGCCAGTTTGGGATGCAATTAAAACAGCCAAAATTCATTTTACAGGGGCGTTGAAGCTATGATTGTCGACTACCTGCGTCCAGGTGTCGTGGGCA

**************************************************((((((((((...((...(((..((((............)))).))).)).))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047

female body

 SRR060667

160_females_carcasses_total

 M061

embryo

 M027

male body		 M028

head

 SRR060659

Argentina_testes_total

 SRR060670

9_testes_total

 SRR2096014

Ovary_Strain_160_oxidized		 V047

embryo

 V116

male body		 SRR060672

9x160_females_carcasses_total

 SRR1106730

embryo_16-30h

 V053

head

 SRR060665

9_females_carcasses_total

 SRR060669

160x9_females_carcasses_total

 SRR060671

9x160_males_carcasses_total

 SRR060682

9x140_0-2h_embryos_total

 SRR060666

160_males_carcasses_total

 SRR060660

Argentina_ovaries_total

 SRR060661

160x9_0-2h_embryos_total

 SRR060664

9_males_carcasses_total

 SRR060674

9x140_ovaries_total

 SRR060678

9x140_testes_total

 SRR060679

140x9_testes_total

 SRR060681

Argx9_testes_total

 SRR060684

140x9_0-2h_embryos_total

 SRR1106725

embryo_14-16h

 SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		 SRR2096058

Ovary_Min_98		 SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers		 SRR060663

160_0-2h_embryos_total

 SRR060658

140_ovaries_total

 SRR060657

140_testes_total

 SRR060655

9x160_testes_total

 SRR060686

Argx9_0-2h_embryos_total
..................................................GTAAGATGAACAATTCGAGGCCAGTTT...................................................................................... 27 0 1 3.00 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................TTTGCCATCTCTGTGGTTATTCACACC...................................................................................................................... 27 1 1 3.00 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................ATGATTGTCGACTACCTGCGTCCAG............ 25 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................ACAGCCAAAATTCATTTTACAG.................................................. 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0
.AGGTGCTGGACGCGCTATTGGCCATCT....................................................................................................................................... 27 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GCGTCCAGGTGTCGTGGGCA 20 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTGTCGACTACCTGCGTCCAGGT.......... 23 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GATTGTCGACTACCTGCGTCCAGGT.......... 25 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......CTGGACGCGCTATTGGCC........................................................................................................................................... 18 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CTACCTGCGTCCAGGTGTCGTGGGC. 25 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AGCCAAAATTCATTTTACAGT................................................. 21 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GATGAACAATTGGAGGGC........................................................................................... 18 2 5 1.60 8 0 0 0 5 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................GAGGAACAATTCGAGGGCA.......................................................................................... 19 2 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GGGCGTTGAAGCTATGATTGTCGACC........................ 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CTCTGTGGTTATTCACACC...................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................ACAGCCAAAATTCATTTTA..................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGCGTCCAGGTGTCGTGGGCA 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTGGGGCGTTGAAGCTATGATT............................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTGGGGCGTTGAAGCTATGATTGTCGAC......................... 28 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TGCTGGACGCGCTATTGGCCATC........................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................ATGATTGTCGACTACCTGCGTCCAGGT.......... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CGTTGAAGCTATGATTGTCGA.......................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CATTGGGGCGTTGAAGCTATGAT................................ 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GGGCGTTGAAGCTATGATTGTCGA.......................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GCTATGATTGTCGACTACC..................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CTGCGTCCAGGTGTCGTGGGC. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CGACTACCTGCGTCCAGGTGT........ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................ATTGTCGACTACCTGCGTCCA............. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CGGCGTCCAGGCGTCGTGGGC. 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGCGTCCAGGTGTCGTGGGC. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GATTGTCGACTACCTGCGTCCAGGC.......... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GTGCTGGACGCGCTATTGGCC........................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CAGCCAAAATTCATTTTACAGTCC............................................... 24 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................ATGATTGTCGACTACCTGCGTC............... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACAGCCAAAATTCATTTTAC.................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CTACCTGCGTCCAGGTGTC....... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................CAGCCAAAATTCATTTTACAGT................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................TATGATTGTCGACTACCTGCGACCAGGT.......... 28 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CTACCTGCGTCCCGGTGTCGTGGGC. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GATTGTCGACTACCTGCGTCCAG............ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GCGTCCAGGTGTCGTGGGC. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GTTATTCACACCCATTGGGGC............................................................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTCGACTACCTGCGTCCAGGTGT........ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTGTCGACTACCTGCGTCCAGGTGT........ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GGGGCGTTGAAGCTATGATTGTC............................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTGGGGCGTTGAAGCTATGATTGTC............................ 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................GACTACCTGCGTCCAGGTGT........ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GGGGCGTTGAAGCTATGATTGTCG........................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................ACCTGCGTCCAGGTGTCGTGGGC. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTCGAGGCCAGTTTGGGAT................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GTTGAAGCTATGATTGTCGACTAC...................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGATGAACAATTCGAGGCCAG......................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGATGAACAATTCGAGGCCAGT........................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GATTGTCGACTACCTGCGTCCAGG........... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CTACCTGCGTCCAGGTGTCGTGGG.. 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................ACGATGAACAATTGGAGGGC........................................................................................... 20 3 5 0.60 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................GACGAACAATTCGAGGGCA.......................................................................................... 19 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GATGAACAATTGGAGGGCA.......................................................................................... 19 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................ATTGGGGCGTTGAAGCTATG.................................. 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................TGGTAAGATGAACGGTTGGA............................................................................................... 20 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTGGGGCGTTGAAGCTATG.................................. 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AGGCCAGTTTGGGAAGCCATT........................................................................... 21 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................ACTGGTAAGATGAACGGTT.................................................................................................. 19 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GAGGAACAATTCGAGGGC........................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................CGAGGAACAATTCGAGGGC........................................................................................... 19 3 20 0.15 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................CGATGAACAATTGGAGGGC........................................................................................... 19 3 20 0.15 3 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GCTGGACTCGCTATTGCC............................................................................................................................................ 18 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................ACGATGAACAATTGGAGG............................................................................................. 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................ATTACAACAGCCAAAATCGAT......................................................... 21 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TGGAGCCGCTATTGGCCA.......................................................................................................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................ACGATGAACAATTGGAGGG............................................................................................ 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CGATGAACAATTGGAGGGCA.......................................................................................... 20 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GAGGAACAATTGGAGGCAAG......................................................................................... 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................ACGAGGAACAATTCGAGGGC........................................................................................... 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................GGAGGAACAATTCGAGGGC........................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................ACTGGTAAGATGAACGGT................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CATTTTACAGCGATGTTGAA........................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

GTCCACGACCTGCGCGATAACCGGTAGAGACACCAATAAGTGTGGGTAACCATTCTACTTGTTAAGCTCCGGTCAAACCCTACGTTAATTTTGTCGGTTTTAAGTAAAATGTCCCCGCAACTTCGATACTAACAGCTGATGGACGCAGGTCCACAGCACCCGT

**************************************************((((((((((...((...(((..((((............)))).))).)).))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060657

140_testes_total

 SRR060672

9x160_females_carcasses_total

 SRR060683

160_testes_total

 V116

male body		 SRR060686

Argx9_0-2h_embryos_total

 SRR2096013

Ovary_Strain_9_oxidized		 M061

embryo

 SRR060679

140x9_testes_total

 SRR2096056

Ovary_Min_46
..............................................................................................................GTCCCCGCAACTTCGATACTA................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........TGCGCGATAACCGGTAGAGAC.................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........CCTGCGCGATAACCGGTAGAG...................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............CGATAACCGGTAGAGACACC................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................AGCAGCTGATGGACACAG............... 18 2 2 0.50 1 0 0 0 0 1 0 0 0 0
.....................................................................CGGTCAAAACCTACGTCAA........................................................................... 19 2 20 0.20 4 0 0 0 0 0 0 3 0 1
......................................................................................................AAAAAAATGTCCCCGTAACTT........................................ 21 3 6 0.17 1 0 0 0 0 0 1 0 0 0
.................................................................................................................................GAGCAGCTGATGGACACAG............... 19 3 10 0.10 1 0 0 0 0 1 0 0 0 0
................................................................................................................................GTATCAGCTGATGCACGC................. 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droVir3 scaffold_13047:18462417-18462579 + dvi_17513 candidate CAGGTGCTGGACGCGCTATTGGCCATCTCTGTGGTTATTCACACCCATTGGTAAGATGAA-----CAA-------------------------------TTCG---------AG-----------GCCAGTTTGGGA-------------TGCAAT--T------------------------------AAAACAGCCAAA--------------ATTCATTT------------------------------------------------------------------------------TACAGGGGCGTTGAAGCTATGATTGTCGACTACCTGCGTCCAGGTGTCGTGGGCA
droMoj3 scaffold_6540:25959885-25960046 - CAAGTCATGGATGCCCTTTTGGCTATATCTGTAGTCATTCACACCCATTGGTAAGATGCGTAGA-AAA-------------------------------TAATTTGTGA----------------------------------------TATAATT---------------------------------TGCCTAACCATTGTT-----------TATAAACT------------------------------------------------------------------------------TATAGGGGTGTTGAGGCAATGGTGGTGGATTACCTGCGCCCATCAGTTGTTGGCA
droGri2 scaffold_15074:6238349-6238511 - CAGATAATGGATGCACTTCTAGCTGTGTCGGTTGTCATTCACACCCATTGGTAAGATGAA-----CAT-------------------------------TTGG---------AG-----------GCAAACACTCAA------------CATAGTT---------------------------------CATCTAATCTCT--------------TATAATCT------------------------------------------------------------------------------TGCAGGGGCGTTGAAGCTATGGTTGTCGACTATCTGCGTCCAGCAGTTGTTGGCA
droWil2 scf2_1100000004921:3340027-3340188 + CAGGTTTTGGATGCCCTAATGGCCATATCTGTGGTAATACACACACATTGGTAAGGTCCTAATA-CAA-------------------------------TTGT---------AT-----------GCC---------------------GTTTCGT---------------------------------TCTATTTAATTG---ATTCCTA-------ATTGT------------------------------------------------------------------------------TTCAGGGGTGTGGAGGCTATGGTTGTTGACTACTTACGTCCACAAGTAGTGGGCA
dp5 2:12830085-12830249 - CAGATACTGGATGCTCTGCTGGCCATCTCAGTGGTTATTCACGCCCATTGGTATGTA--------CAT-------------------------------TT-------------CTGCTACCC-----------------------------------------GGGAAAAAGGGGAAAACGAATAACTGAGATTCTAAT--------------------TAT------------------------------------------------------------------------------TGCAGGGGTGTTGAGGCCATGGTTGTCGACTACATGCGTCCATCTGTGGTGGGAA
droPer2 scaffold_0:7627564-7627731 + CAGATACTGGATGCTCTGCTGGCCATCTCAGTGGTTATTCACGCCCATTGGTATGTA--------CAT-------------------------------TT-------------CTGCTTCCC-----------------------------------------GGGAAAAAGGGGAAAACGAATCACTGAGATTCTAATT-----------------ATTAT------------------------------------------------------------------------------TGCAGGGGTGTTGAGGCCATGGTTGTCGACTACATGCGTCCCTCTGTGGTGGGAA
droAna3 scaffold_13340:19947870-19948044 + CAGGTGCTAGATGGCCTTCTGGCCGTTTCGGTTGTCATCCACACACACTGGTAAGAGATAT---------------------------------------C-------------CTA-----------------------------ACCCTTTACTCATCAAACGGCCAAAAAGTCTCAACAAAACTTTGTTCT----------------------TCCAAAT------------------------------------------------------------------------------TTTAGGGGAGTGGAAGCCATGGTCGTAGACTACATGCGCCCCGCAGTTGTTGGAA
droBip1 scf7180000396413:2446971-2447140 - CAAGTGCTGGATGCCCTTCTGGCCGTTTCGGTTGTCATCCACACACACTGGTGAGTGTTTCAT----------------------------------------------------------CCAAGCCA----TGGAGTTATCCAGA---------CATCCAAATGCTAATACATCAC-------------------------------------TATAAATT------------------------------------------------------------------------------TTCAGGGGAGTTGAAGCTATGGTCGTTGACTACCTGCGTCCCTCGGTTGTTGGAA
droKik1 scf7180000302639:2991275-2991445 + CAGGTGCTGGACGCTCTGCTGGCCGTATCGGTGGTGATCCACGCCCATTGGTAAGTTATCCG----------------------------------------CTTAAATCCGATCT---------GCT-GCTTTGGA-------------TTCACT---------------------------------TATAAGTTGCAA---ATTC---TTTC-----CAT------------------------------------------------------------------------------TTCAGGGGCGTTGAGGCAATGGTGGTGGACTACATGCGTCCCTCCGTTGTGGGCA
droFic1 scf7180000453800:1756793-1756971 - CAGGTTTTGGATGCTCTCCTGGCCGTCTCCGTCGTCATCCACACCCATTGGTAAGATGTTCTGAACATTTTCGACAATAATTATTTTCAAACATTTTTT--------------------------------------------------------------------------TTTTAAATAAGACTTT---T----------------------TTTCAACT------------------------------------------------------------------------------TACAGGGGCGTTGAGGCCATGGTGGTGGACTACATGCGACCCTCGGTTGTGGGCA
droEle1 scf7180000486474:637450-637511 - TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACT------------------------------------------------------------------------------TACAGGGGCGTTGAGGCCATGGTGGTCGACTACATGCGGCCATCTGTCGTGGGCA
droRho1 scf7180000777205:37196-37257 - TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACT------------------------------------------------------------------------------TACAGGGGCGTTGAAGCCATGGTGGTGGACTACATGCGGCCCTCTGTCGTGGGCA
droBia1 scf7180000302075:5141701-5141758 - CAGGTATTGGACGCCCTCCTGGCCATTTCCGTTGTGATCCACACCCACTGGTAAGTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415765:1339387-1339443 + CAGGTATTGGACGCCCTGCTGGCCGTCTCCGTCGTTATCCACACCCACTGGTAAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409798:802183-802386 + CAGGTATTGGACGCCCTTCTGGCCATCTCCGTCGTCATCCACACCCACTGGTAAGACATCA----------------------------------------------------------------------------------------------------------------------------------------CCCC---ATTC---G----------TAATTGAAAATTCTCCAAATGTTAAGCTTTCTAAGTTAAGAATGTGGTAATCACGATTGGCATTTTTCTATACTCCAAAAACAGGGGCGTTGAAGCCATGGTGGTGGACTACATGCGGCCCTCTGTCGTGGGCA
dm3 chr3R:19585596-19585756 - CAGGTATTGGACGCCCTCATGGCCATCTCTGTCGTCATCCACACCCATTGGTAAGATATCCTTG-AGG-------------------------------AAAATTAAAC----------------------------------------CTTTACT---------------------------------TATATTTTCCTC---ATTC---A------------------------------------------------------------------------------------CCAAACGCAGGGGCGTGGAGGCCATGGTAGTTGACTACATGCGGCCATCTGTCGTTGGAA
droSim2 3r:19136407-19136567 - CAGGTATTGGACGCCCTCATGGCCATCTCTGTCGTTATCCACACCCATTGGTAAGATATCCTTG-AGG-------------------------------CAAATTAAAC----------------------------------------CTTTACT---------------------------------TATATTTTCCTC---ATTC---A------------------------------------------------------------------------------------CCAATCGCAGGGGCGTGGAGGCCATGGTAGTTGACTACATGCGGCCATCTGTCGTTGGAA
droSec2 scaffold_0:19943896-19944056 - CAGGTATTGGACGCCCTCATGGCTATCTCTGTCGTCATCCACACCCATTGGTAAGATATCCTTG-AGG-------------------------------CAAATTAAAC----------------------------------------CTTTACT---------------------------------TATATTTTCCTC---ATTC---A------------------------------------------------------------------------------------CCAAACGCAGGGGCGTGGAGGCCATGGTAGTTGACTACATGCGGCCATCTGTCGTTGGAA
droYak3 3R:20492088-20492247 - CAGGTCTTGGACGCTCTTTTGGCCATCTCCGTCGTCATCCACACCCACTGGTAAGATATCCCAA-AGT-------------------------------AAAATCAAAC----------------------------------------TATTATT---------------------------------AATATTTTCCTT---ATTA---A------------------------------------------------------------------------------------CCAA-AACAGGGGTGTTGAGGCCATGGTAGTGGACTACATGCGGCCATCTGTCGTTGGAA
droEre2 scaffold_4820:8458784-8458943 + CAGGTATTGGACGCGCTTTTGGCCATCTCCGTCGTCATCCACACTCACTGGTAAGATATC-TTA-AGT-------------------------------GAAATGAAAC----------------------------------------CATTATT---------------------------------GATATATTCCTC---GCTT---G------------------------------------------------------------------------------------CCAAACACAGGGGTGTTGAGGCGATGGTAGTGGACTACATGCGGCCATCTGTCGTTGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CAGGTGCTGGACGCGCTATTGGCCATCTCTGTGGTTATTCACACCCATTGGTAAGATGAA-----CAA-------------------------------TTCG---------AG-----------GCCAGTTTGGGA-------------TGCAAT--T------------------------------AAAACAGCCAAA--------------ATTCATTT------------------------------------------------------------------------------TACAGGGGCGTTGAAGCTATGATTGTCGACTACCTGCGTCCAGGTGTCGTGGGCASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................GTAAGATGAA-----CAA-------------------------------TTCG---------AG-----------GCCAGTTT...............................................................................................................................................................................................................................2713.0031001000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATGATTGTCGACTACCTGCGTCCAG............2512.0020000000000010000000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................ACAGCCAAA--------------ATTCATTT------------------------------------------------------------------------------TACAG..................................................2212.0020000000000000000000000000000100000000000000000000000000000000000000000000000001
.AGGTGCTGGACGCGCTATTGGCCATCT........................................................................................................................................................................................................................................................................................................................................2712.0020010000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GCGTCCAGGTGTCGTGGGCA2012.0020010000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTGTCGACTACCTGCGTCCAGGT..........2312.0020000000000000010010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GATTGTCGACTACCTGCGTCCAGGT..........2512.0020010000000000001000000000000000000000000000000000000000000000000000000000000000
......CTGGACGCGCTATTGGCC............................................................................................................................................................................................................................................................................................................................................1812.0020200000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CTACCTGCGTCCAGGTGTCGTGGGC.2512.0020000000000000000010001000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................AGCCAAA--------------ATTCATTT------------------------------------------------------------------------------TACAGT.................................................2112.0020000000000000000000000000000000000000000000000000000000000101000000000000000000
..................................................................................................................................................................................................................................................................................................................GGGCGTTGAAGCTATGATTGTCGACC........................2611.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTCTGTGGTTATTCACACC.......................................................................................................................................................................................................................................................................................................................1911.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................ACAGCCAAA--------------ATTCATTT------------------------------------------------------------------------------TA.....................................................1911.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TGCGTCCAGGTGTCGTGGGCA2111.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
....TGCTGGACGCGCTATTGGCCATC.........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATGATTGTCGACTACCTGCGTCCAGGT..........2711.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CGTTGAAGCTATGATTGTCGA..........................2111.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GGGCGTTGAAGCTATGATTGTCGA..........................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GCTATGATTGTCGACTACC.....................1911.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CTGCGTCCAGGTGTCGTGGGC.2111.0010000000000100000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................CGACTACCTGCGTCCAGGTGT........2111.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ATTGTCGACTACCTGCGTCCA.............2111.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................................................................................................................................................TGCGTCCAGGTGTCGTGGGC.2011.0010000000001000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GATTGTCGACTACCTGCGTCCAGGC..........2511.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
...GTGCTGGACGCGCTATTGGCC............................................................................................................................................................................................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CAGCCAAA--------------ATTCATTT------------------------------------------------------------------------------TACAGTCC...............................................2411.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................................................................................................................................ATGATTGTCGACTACCTGCGTC...............2211.0010000000001000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................AACAGCCAAA--------------ATTCATTT------------------------------------------------------------------------------TAC....................................................2111.0010000000000000000000000001000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CTACCTGCGTCCAGGTGTC.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................CAGCCAAA--------------ATTCATTT------------------------------------------------------------------------------TACAGT.................................................2211.0010000000000000000000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GATTGTCGACTACCTGCGTCCAG............2311.0010000000000000000000000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GCGTCCAGGTGTCGTGGGC.1911.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTTATTCACACCCATTGGGGC..............................................................................................................................................................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GTCGACTACCTGCGTCCAGGTGT........2311.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTGTCGACTACCTGCGTCCAGGTGT........2511.0010000000000000000100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GGGGCGTTGAAGCTATGATTGTC............................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
........................................................................................................................................................................................................................................................................................................................................GACTACCTGCGTCCAGGTGT........2011.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GGGGCGTTGAAGCTATGATTGTCG...........................2411.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACCTGCGTCCAGGTGTCGTGGGC.2311.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTCG---------AG-----------GCCAGTTTGGGA-------------T.............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................................................................................................................................................................................................................................................................GTTGAAGCTATGATTGTCGACTAC......................2411.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
..................................................GTAAGATGAA-----CAA-------------------------------TTCG---------AG-----------GCCAG..................................................................................................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGATGAA-----CAA-------------------------------TTCG---------AG-----------GCCAGT.................................................................................................................................................................................................................................2511.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GATTGTCGACTACCTGCGTCCAGG...........2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CTACCTGCGTCCAGGTGTCGTGGG..2411.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
droMoj3
CAAGTCATGGATGCCCTTTTGGCTATATCTGTAGTCATTCACACCCATTGGTAAGATGCGTAGA-AAA-------------------------------TAATTTGTGA----------------------------------------TATAATT---------------------------------TGCCTAACCATTGTT-----------TATAAACT------------------------------------------------------------------------------TATAGGGGTGTTGAGGCAATGGTGGTGGATTACCTGCGCCCATCAGTTGTTGGCASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
........................ATATCTGTAGTCATTCACACC.......................................................................................................................................................................................................................................................................................................................2112.002200000
...GTCATGGATGCCCTTTTGGCT............................................................................................................................................................................................................................................................................................................................................2111.001000100
........................ATATCTGTAGTCATTCACAC........................................................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................CCTGCGCCCATCAGTTGTTGGCA2311.001000100
......................................................................................................................................................................................................................................................................................................................GTTGAGGCAATGGTGGTGGA..........................2011.001000001
droGri2
CAGATAATGGATGCACTTCTAGCTGTGTCGGTTGTCATTCACACCCATTGGTAAGATGAA-----CAT-------------------------------TTGG---------AG-----------GCAAACACTCAA------------CATAGTT---------------------------------CATCTAATCTCT--------------TATAATCT------------------------------------------------------------------------------TGCAGGGGCGTTGAAGCTATGGTTGTCGACTATCTGCGTCCAGCAGTTGTTGGCASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...................................................................................................................................................................................................................................................................................................................................TTGTCGACTATCTGCGTCCAGC...........2211.00110
.....AATGGATGCACTTCTAGCTGTGTC.......................................................................................................................................................................................................................................................................................................................................2411.00110
....................................................................................................................................................................................................................................................................................................................GCGTTGAAGCTATGGTTGTC............................2011.00110
droWil2
CAGGTTTTGGATGCCCTAATGGCCATATCTGTGGTAATACACACACATTGGTAAGGTCCTAATA-CAA-------------------------------TTGT---------AT-----------GCC---------------------GTTTCGT---------------------------------TCTATTTAATTG---ATTCCTA-------ATTGT------------------------------------------------------------------------------TTCAGGGGTGTGGAGGCTATGGTTGTTGACTACTTACGTCCACAAGTAGTGGGCASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..................................................................................................................................................................................................................................................................................................................GGGTGTGGAGGCTATGGTTGTTGACT........................2611.00101000
.........................TATCTGTGGTAATACACACA.......................................................................................................................................................................................................................................................................................................................2011.00101000
...............................................................................................................................................................................................................................................................................................................................ATGGTTGTTGACTACTTACGTCCA.............2411.00101000
......................................................................................................................................................................................................................................................................................................................GTGGAGGCTATGGTTGTT............................1811.00100010
....................................................................................................................................................................................................................................................................................................................GTGTGGAGGCTATGGTTGTT............................2011.00100010
...........................................................................................................................................................................................................................................................................................................................GGCTATGGTTGTTGACTACTTACGTC...............2611.00101000
...........TGCCCTAATGGCCATATCTGT....................................................................................................................................................................................................................................................................................................................................2111.00100010
...GTTTTGGATGCCCTAATGGCC............................................................................................................................................................................................................................................................................................................................................2111.00101000
.....................................................................................................................................................................................................................................................................................................................TGTGGAGGCTATGGTTGTTGA..........................2111.00100100
...............................TGGTAATACACACACATTGGT................................................................................................................................................................................................................................................................................................................2111.00101000
.................................................................................................................................................................................................................................................................................................................................GGTTGTTGACTACTTACGTCCACA...........2411.00101000
...................................................................................................................................................................................................................................................................................................................GGTGTGGAGGCTATGGTT...............................1811.00100010
dp5
CAGATACTGGATGCTCTGCTGGCCATCTCAGTGGTTATTCACGCCCATTGGTATGTA--------CAT-------------------------------TT-------------CTGCTACCC-----------------------------------------GGGAAAAAGGGGAAAACGAATAACTGAGATTCTAAT--------------------TAT------------------------------------------------------------------------------TGCAGGGGTGTTGAGGCCATGGTTGTCGACTACATGCGTCCATCTGTGGTGGGAASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..GATACTGGATGCTCTGCTGGCC............................................................................................................................................................................................................................................................................................................................................2216.0060510000000
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCCATGGTTGTCGA..........................2214.0040300100000
...ATACTGGATGCTCTGCTGGCC............................................................................................................................................................................................................................................................................................................................................2113.0030300000000
....TACTGGATGCTCTGCTGGCC............................................................................................................................................................................................................................................................................................................................................2013.0030100200000
.................................GTTATTCACGCCCATTGGG................................................................................................................................................................................................................................................................................................................1913.0030300000000
.................................................................................................................................................................................................................................................................................................................GGGGTGTTGAGGCCATGGTT...............................2012.0020200000000
............GCTCTGCTGGCCATCTCAGTG...................................................................................................................................................................................................................................................................................................................................2112.0020200000000
..........................................................................................................................................................................................................................................................................................................................AGGCCATGGTTGTCGACTACA.....................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................ACATGCGTCCATCTGTGGTGG...2111.0010100000000
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCCATGGTTGTC............................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................GGTTGTCGACTACATGCGTC...............2011.0011000000000
...........................................................................................................................................................................................................................................................................................................................................TACATGCGTCCATCTGTGGT.....2011.0010100000000
...ATACTGGATGCTCTGCTGGCCATCTCAGT....................................................................................................................................................................................................................................................................................................................................2911.0010010000000
..................................................................................................................................................................................................................................................................................................................GGGTGTTGAGGCCATGGC................................1811.0010001000000
..................................................................................................................................................................................................................................................................................................................GGGTGTTGAGGCCATGGTT...............................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................ACTACATGCGTCCATCTGT........1911.0010010000000
..............................................................................................................................................................................................................................................................................................................................................ATGCGTCCATCTGTGGTGGGAA2211.0010100000000
.......................CATCTCAGTGGTTATTCAC..........................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................TACATGCGTCCATCTGTGGTG....2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................TGTTGAGGCCATGGTTGTCGA..........................2111.0010100000000
....TACTGGATGCTCTGCTGGC.............................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........GATGCTCTGCTGGCCATCTCAGTG...................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.AGATACTGGATGCTCTGCTGGC.............................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....TACTGGATGCTCTGCTGGCCATC.........................................................................................................................................................................................................................................................................................................................................2311.0010001000000
...........................................................................................................................................................................................................................................................................................................................................TACATGCGTCCATCTGTGGTGG...2211.0010000001000
........................................................................................................................................................................................................................................................................................................................................GACTACATGCGTCCATCTGTGGTGGGAA2811.0010000001000
........................................................................................................................................................................................................................................................................................................................................GACTACATGCGTCCATCTGTGGTGGG..2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGTCCATCTGTGGTG....2211.0010100000000
.AGATACTGGATGCTCTGCTGGCC............................................................................................................................................................................................................................................................................................................................................2311.0010010000000
...............................................................................................................................................................................................................................................................................................................................................TGCGTCCATCTGTGGTGGGA.2011.0010000010000
........................................................................................................................................................................................................................................................................................................................................GACTACATGCGTCCATCTGT........2011.0010000100000
.......................................................................................................................................................................................................................................................................................................................................CGACTACATGCGTCCATCTGTG.......2211.0010000001000
.............................................................................................................................................................................................................................................................................................................................CCATGGTTGTCGACTACATGC..................2111.0010100000000
.....ACTGGATGCTCTGCTGGCC............................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................ACATGCGTCCATCTGTGGTGGGA.2311.0010001000000
..GATACTGGATGCTCTGCTGGC.............................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................TGTTGAGGCCATGGTTGTCGAC.........................2211.0010000001000
..........ATGCTCTGCTGGCCATCTCAGTG...................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........ATGCTCTGCTGGCCATCTCAGT....................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGTCCATCTGTGGTGG...2311.0010100000000
droPer2
CAGATACTGGATGCTCTGCTGGCCATCTCAGTGGTTATTCACGCCCATTGGTATGTA--------CAT-------------------------------TT-------------CTGCTTCCC-----------------------------------------GGGAAAAAGGGGAAAACGAATCACTGAGATTCTAATT-----------------ATTAT------------------------------------------------------------------------------TGCAGGGGTGTTGAGGCCATGGTTGTCGACTACATGCGTCCCTCTGTGGTGGGAASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...........................................................................................................................................................................................................................................................................................................................................TACATGCGTCCCTCTGTGGT.....2013.003201000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGTCCCTCTGTGGTGGGAA2612.002001001
.................................................................................................................................................................................................................................................................................................................GGGGTGTTGAGGCCATGGTTGTCG...........................2412.002000002
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCCATGGTTGTCGA..........................2212.002100001
...............................................................................................................................................................................................................................................................................................................................................TGCGTCCCTCTGTGGTGGGAA2112.002000002
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCCATGGTTGTCG...........................2112.002000002
................................................................................................................................................................................................................................................................................................................................TGGTTGTCGACTACATGCGTC...............2111.001010000
...............................................................................................................................................................................................................................................................................................................................ATGGTTGTCGACTACATGC..................1911.001001000
........................................................................................................................................................................................................................................................................................................................................GACTACATGCGTCCCTCTGTGGTGGGAA2811.001000001
...........................................................................................................................................................................................................................................................................................................................................TACATGCGTCCCTCTGTGGTGGGAA2511.001000001
...ATACTGGATGCTCTGCTGGCC............................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................GCCATGGTTGTCGACTACA.....................1911.001010000
............................................................................................................................................................................................................................................................................................................................GCCATGGTTGTCGACTACATGG..................2211.001100000
...................................................................................................................................................................................................................................................................................................................GGTGTTGAGGCCATGGTTGTCG...........................2211.001000001
..........................................................................................................................................................................................................................................................................................................................AGGCCATGGTTGTCGACTACATGC..................2411.001100000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGTCCCTCTGTGGTGG...2311.001100000
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCCATGGTTGTCGACTA.......................2511.001100000
...........................................................................................................................................................................................................................................................................................................................................TACATGCGTCCCTCTGTGGC.....2011.001100000
.....ACTGGATGCTCTGCTGGCC............................................................................................................................................................................................................................................................................................................................................1911.001010000
........GGATGCTCTGCTGGCCATC.........................................................................................................................................................................................................................................................................................................................................1911.001010000
..GATACTGGATGCTCTGCTGGCC............................................................................................................................................................................................................................................................................................................................................2211.001000001
droAna3
CAGGTGCTAGATGGCCTTCTGGCCGTTTCGGTTGTCATCCACACACACTGGTAAGAGATAT---------------------------------------C-------------CTA-----------------------------ACCCTTTACTCATCAAACGGCCAAAAAGTCTCAACAAAACTTTGTTCT----------------------TCCAAAT------------------------------------------------------------------------------TTTAGGGGAGTGGAAGCCATGGTCGTAGACTACATGCGCCCCGCAGTTGTTGGAASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
....................GGCCGTTTCGGTTGTCATCCACA.........................................................................................................................................................................................................................................................................................................................2314.004300001
...............................................................................................................................................................................................................................................................................................................................................TGCGCCCCGCAGTTGTTGGA.2014.004400000
.................................................................................................................................................................................................................................................................................................................GGGGAGTGGAAGCCATGGTCGTA............................2313.003300000
.................................................................................................................................................................................................................................................................................................................GGGGAGTGGAAGCCATGGTCGTAGA..........................2513.003300000
........................GTTTCGGTTGTCATCCACAC........................................................................................................................................................................................................................................................................................................................2012.002200000
....................GGCCGTTTCGGTTGTCATCCACACACACT...................................................................................................................................................................................................................................................................................................................2912.002200000
....................GGCCGTTTCGGTTGTCATCCA...........................................................................................................................................................................................................................................................................................................................2112.002200000
....................................................................................................................................................................................................................................................................................................................GAGTGGAAGCCATGGTCGTAGACTACA.....................2711.001000010
.................................................................................................................................................................................................................................................................................................................................GGTCGTAGACTACATGCGCCCC.............2211.001010000
................TTCTGGCCGTTTCGGTTGTCATCCACA.........................................................................................................................................................................................................................................................................................................................2711.001100000
.....................................................................................................................................................................................................................................................................................................................................GTAGACTACATGCGCCCCGC...........2011.001100000
.................................................................................................................................................................................................................................................................................................................................................CGCCCCGCAGTTGTTGGAA1911.001100000
.................................................................................................................................................................................................................................................................................................................GGGGAGTGGAAGCCATGGTCGT.............................2211.001000001
......................................................................................................................................................................................................................................................................................................................GTGGAAGCCATGGTCGTAGACTACA.....................2511.001100000
...............................................................................................................................................................................................................................................................................................................................ATGGTCGTAGACTACATGCGCCCC.............2411.001100000
.............................GGTTGTCATCCACACACACTGGGG...............................................................................................................................................................................................................................................................................................................2411.001010000
.........................................................................................................................................................................................................................................................................................................................................ACTACATGCGCCCCGCAGTTGTTGG..2511.001100000
..............................................................................................................................................................................................................................................................................................................................................ATGCGCCCCGCAGTTGTTGGA.2111.001010000
..............................................................................................................................................................................................................................................................................................................................................ATGCGCCCCGCAGTTGTTG...1911.001100000
.................................................................................................................................................................................................................................................................................................................................GGTCGTAGACTACATGCGCCCCGCA..........2511.001010000
......................................................................................................................................................................................................................................................................................................................GTGGAAGCCATGGTCGTAGA..........................2011.001000010
....................GGCCGTTTCGGTTGTCATCCACAC........................................................................................................................................................................................................................................................................................................................2411.001100000
....................GGCCGTTTCGGTTGTCATCC............................................................................................................................................................................................................................................................................................................................2011.001100000
..........ATGGCCTTCTGGCCGTTTCGGTTGTCATCC............................................................................................................................................................................................................................................................................................................................3011.001000010
.AGGTGCTAGATGGCCTTCTG...............................................................................................................................................................................................................................................................................................................................................2011.001100000
....................GGCCGTTTCGGTTGTCATCCACACAC......................................................................................................................................................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................................................................................................................AGCCATGGTCGTAGACTACA.....................2011.001100000
................................................................................................................................................................................................................................................................................................................................TGGTCGTAGACTACATGCGCCC..............2211.001100000
....................GGCCGTTTCGGTTGTCATC.............................................................................................................................................................................................................................................................................................................................1911.001100000
....................GGCCGTTTCGGTTGTCATCCACACA.......................................................................................................................................................................................................................................................................................................................2511.001100000
........................GTTTCGGTTGTCATCCACACACACTG..................................................................................................................................................................................................................................................................................................................2611.001010000
...................................................................................................................................................................................................................................................................................................................GGAGTGGAAGCCATGGTCGTAGACT........................2511.001100000
...............................................................................................................................................................................................................................................................................................................................ATGGTCGTAGACTACATGCGCCCCGCAGT........2911.001100000
...............................................................................................................................................................................................................................................................................................................................ATGGTCGTAGACTACATGCGCCCCGCAG.........2811.001100000
.................................................................................................................................................................................................................................................................................................................................GGTCGTAGACTACATGCGCCC..............2111.001100000
...........................................................................................................................................................................................................................................................................................................................AGCCATGGTCGTAGACTACATGCGCCCCG............2911.001100000
.................................................................................................................................................................................................................................................................................................................GGGGAGTGGAAGCCATGGTCGTAGAC.........................2611.001100000
..........ATGGCCTTCTGGCCGTTTCGGTTGTC................................................................................................................................................................................................................................................................................................................................2611.001000001
....................................................................................................................................................................................................................................................................................................................GAGTGGAAGCCATGGTCGT.............................1911.001100000
............GGCCTTCTGGCCGTTTCGGTTGTCATCC............................................................................................................................................................................................................................................................................................................................2811.001100000
...................................................................................................................................................................................................................................................................................................................GGAGTGGAAGCCATGGTCGTA............................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................GTAGACTACATGCGCCCCGCA..........2111.001100000
.........................................................................................................................................................................................................................................................................................................................GAAGCCATGGTCGTAGACT........................1911.001100000
.....................................................................................................................................................................................................................................................................................................................AGTGGAAGCCATGGTCGTAGAC.........................2211.001100000
..............................................................................................................................................................................................................................................................................................................................CATGGTCGTAGACTACATGCGCCCCG............2611.001100000
................TTCTGGCCGTTTCGGTTGTCATC.............................................................................................................................................................................................................................................................................................................................2311.001100000
..............CCTTCTGGCCGTTTCGGTTGTCA...............................................................................................................................................................................................................................................................................................................................2311.001100000
............................................................................................................................................................................................................................................................................................................................GCCATGGTCGTAGACTACA.....................1911.001100000
...............................................................................................................................................................................................................................................................................................................................ATGGTCGTAGACTACATGC..................1911.001100000
droBip1
CAAGTGCTGGATGCCCTTCTGGCCGTTTCGGTTGTCATCCACACACACTGGTGAGTGTTTCAT----------------------------------------------------------CCAAGCCA----TGGAGTTATCCAGA---------CATCCAAATGCTAATACATCAC-------------------------------------TATAAATT------------------------------------------------------------------------------TTCAGGGGAGTTGAAGCTATGGTCGTTGACTACCTGCGTCCCTCGGTTGTTGGAASizeHit CountTotal NormTotal
No Reads
droKik1
CAGGTGCTGGACGCTCTGCTGGCCGTATCGGTGGTGATCCACGCCCATTGGTAAGTTATCCG----------------------------------------CTTAAATCCGATCT---------GCT-GCTTTGGA-------------TTCACT---------------------------------TATAAGTTGCAA---ATTC---TTTC-----CAT------------------------------------------------------------------------------TTCAGGGGCGTTGAGGCAATGGTGGTGGACTACATGCGTCCCTCCGTTGTGGGCASizeHit CountTotal NormTotal
No Reads
droFic1
CAGGTTTTGGATGCTCTCCTGGCCGTCTCCGTCGTCATCCACACCCATTGGTAAGATGTTCTGAACATTTTCGACAATAATTATTTTCAAACATTTTTT--------------------------------------------------------------------------TTTTAAATAAGACTTT---T----------------------TTTCAACT------------------------------------------------------------------------------TACAGGGGCGTTGAGGCCATGGTGGTGGACTACATGCGACCCTCGGTTGTGGGCASizeHit CountTotal NormTotal
No Reads
droEle1
TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACT------------------------------------------------------------------------------TACAGGGGCGTTGAGGCCATGGTGGTCGACTACATGCGGCCATCTGTCGTGGGCASizeHit CountTotal NormTotal
No Reads
droRho1
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACT------------------------------------------------------------------------------TACAGGGGCGTTGAAGCCATGGTGGTGGACTACATGCGGCCCTCTGTCGTGGGCASizeHit CountTotal NormTotal
No Reads
droBia1
CAGGTATTGGACGCCCTCCTGGCCATTTCCGTTGTGATCCACACCCACTGGTAAGTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CAGGTATTGGACGCCCTGCTGGCCGTCTCCGTCGTTATCCACACCCACTGGTAAGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CAGGTATTGGACGCCCTTCTGGCCATCTCCGTCGTCATCCACACCCACTGGTAAGACATCA----------------------------------------------------------------------------------------------------------------------------------------CCCC---ATTC---G----------TAATTGAAAATTCTCCAAATGTTAAGCTTTCTAAGTTAAGAATGTGGTAATCACGATTGGCATTTTTCTATACTCCAAAAACAGGGGCGTTGAAGCCATGGTGGTGGACTACATGCGGCCCTCTGTCGTGGGCASizeHit CountTotal NormTotal
No Reads
dm3
CAGGTATTGGACGCCCTCATGGCCATCTCTGTCGTCATCCACACCCATTGGTAAGATATCCTTG-AGG-------------------------------AAAATTAAAC----------------------------------------CTTTACT---------------------------------TATATTTTCCTC---ATTC---A------------------------------------------------------------------------------------CCAAACGCAGGGGCGTGGAGGCCATGGTAGTTGACTACATGCGGCCATCTGTCGTTGGAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................TGTCGTCATCCACACCCATTGGGGC..............................................................................................................................................................................................................................................................................................................2516.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000003000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................TGGCCATCTCTGTCGTCATCCA...........................................................................................................................................................................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................TCTGTCGTCATCCACACCCATTGGGG...............................................................................................................................................................................................................................................................................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGGCCATCTCTGTCGTCATC.............................................................................................................................................................................................................................................................................................................................2014.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGGTATTGGACGCCCTCA.................................................................................................................................................................................................................................................................................................................................................1814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GGCCATCTCTGTCGTCATCCA...........................................................................................................................................................................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGGCCATCTCTGTCGTCA...............................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATGGCCATCTCTGTCGTC................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCTGTCGTCATCCACACCC......................................................................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGGCCATCTGTCGT.....2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................CCATCTCTGTCGTCATCCAC..........................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGGTATTGGACGCCCTCAT................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TACATGCGGCCATCTGTCGTTGGA.2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TGGAGGCCATGGTAGTTGACTACAT....................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CATCTCTGTCGTCATCCAC..........................................................................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCTGTCGTCATCCACACCCATTGGGGC..............................................................................................................................................................................................................................................................................................................2712.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTATTGGACGCCCTCATGGCCAT..........................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GACTACATGCGGCCATCTGTCGTT....2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GTGGAGGCCATGGTAGTT............................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TGGTAGTTGACTACATGC..................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GGTAGTTGACTACATGCGGCC..............2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTCTGTCGTCATCCACACC.......................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GGTAGTTGACTACATGCGGCCG.............2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TTGACTACATGCGGCCATCTGTCGT.....2511.001000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGGTATTGGACGCCCTCATGGCCATCT........................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AAGATATCCTTG-AGG-------------------------------AAAATT...........................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..GGTATTGGACGCCCTCAT................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CCATGGTAGTTGACTACATG...................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGGACGCCCTCATGGCCATCT........................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGGCCATCTGTC.......1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATGGTAGTTGACTACATGCG.................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GGGCGTGGAGGCCATGGTAGTTG...........................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGGCCATCTGTCGTTGGA.2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................CTCTGTCGTCATCCACACCC......................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GGCCATCTCTGTCGTCATCCAC..........................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TAGTTGACTACATGCGGCCAT............2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CATGGTAGTTGACTACATGCGGCCA.............2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CCTCATGGCCATCTCTGTCGT.................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................TGGCCATCTCTGTCGTCATCCACA.........................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTATTGGACGCCCTCATGGCC............................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GCGGCCATCTGTCGTTGGA.1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GTGGAGGCCATGGTAGTTGACT........................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TGGTAGTTGACTACATGCGGCC..............2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GGCCATCTGTCGTTGGAA1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GGTAGTTGACTACATGCGGCCA.............2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCTCTGTCGTCATCCACACCCATTGG.................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGGTATTGGACGCCCTCATGGCCATC.........................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GTTGACTACATGCGGCCATCTGTCGT.....2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACATGCGGCCATCTGTCGTTGG..2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCTCTGTCGTCATCCACACCCATTGGG................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................A------------------------------------------------------------------------------------CCAAACGCAGGGGCGTGG..........................................1911.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CGGCCATCTGTCGTTGG..1711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CATGCGGCCATCTGTCGTT....1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ACTACATGCGGCCATCTGTCGTT....2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CTCATGGCCATCTCTGTCGTC................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATTGGACGCCCTCATGGCC............................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATGGTAGTTGACTACATGCGGCCA.............2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACATGCGGCCATCTGTCG......1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GACTACATGCGGCCATCT..........1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TGGAGGCCATGGTAGTTGACT........................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GTAGTTGACTACATGCGGCCA.............2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTGTCGTCATCCACACCCATTG..................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CGTGGAGGCCATGGTAGTTGACTA.......................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............CTCATGGCCATCTCTGTCGTCATCCA...........................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATGGTAGTTGACTACATGC..................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GGGCGTGGAGGCCATGGTAGT.............................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CGGCCATCTGTCGTTGGA.1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CGTGGAGGCCATGGTAGTTGACTACA.....................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....ATTGGACGCCCTCATGGCCATCT........................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CATGGTAGTTGACTACATGCGGCCAT............2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GTGGAGGCCATGGTAGTTGACTACA.....................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CCATGGTAGTTGACTACATGCGGCCATC...........2811.001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACATGCGGCCATCTGTCGTT....2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CAGGGGCGTGGAGGCCATGGT................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCCTTG-AGG-------------------------------AAAATTAAAC----------------------------------------CTTTACT---------------------------------.......................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TACATGCGGCCATCTGTCGTT....2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCTGTCGTCATCCACACCCATTGCGG...............................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GCGTGGAGGCCATGGTAGC.............................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GTAGTTGACTACATGCGGCCATCT..........2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCTCTGTCGTCATCCACACCCATTGGGG...............................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GTGGAGGCCATGGTAGTTGA..........................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GCGTGGAGGCCATGGTAGTT............................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TCGTCATCCACACCCATTGGT................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TACATGCGGCCATCTGTCGT.....2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GCCATGGTAGTTGACTACATGC..................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTGTCGTCATCCACACCCATT...................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GGGGCGTGGAGGCCATGGTAGTTGACTA.......................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GGAGGCCATGGTAGTTGACTACATGCGGC...............2911.001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCATCCACACCCATTGGG................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTGGACGCCCTCATGGCCATCTCTGT....................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CGTGGAGGCCATGGTAGTTGA..........................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................TAGTTGACTACATGCGGCCATCTGTC.......2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCCCTCATGGCCATCTCTGTCGTCATCC............................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GGCCATGGTAGTTGACTACATGC..................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGACTACATGCGGCCATCTGTC.......2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CATCTCTGTCGTCATCCACAC........................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATGGTAGTTGACTACATG...................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACATGCGGCCATCTGTCGTTGGA.2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................ATGCGGCCATCTGTCGTTG...1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GGGCGTGGAGGCCATGGTAGTT............................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................TCTCTGTCGTCATCCACACCCATTGGGGC..............................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAGGTATTGGACGCCCTCATGGCCATCTCTGTCGTTATCCACACCCATTGGTAAGATATCCTTG-AGG-------------------------------CAAATTAAAC----------------------------------------CTTTACT---------------------------------TATATTTTCCTC---ATTC---A------------------------------------------------------------------------------------CCAATCGCAGGGGCGTGGAGGCCATGGTAGTTGACTACATGCGGCCATCTGTCGTTGGAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................ATCTCTGTCGTTATCCACACC.......................................................................................................................................................................................................................................................................................................................2113.00300300000000000000
.......................CATCTCTGTCGTTATCCAC..........................................................................................................................................................................................................................................................................................................................1913.00301200000000000000
..................................................GTAAGATATCCTTG-AGG-------------------------------CA...............................................................................................................................................................................................................................................................1912.00200200000000000000
.......TGGACGCCCTCATGGCCATCTCTGTCGT.................................................................................................................................................................................................................................................................................................................................2812.00200000000200000000
...............................................................................................................................................................................................................................................................................................................................................TGCGGCCATCTGTCGTTGGAA2111.00100000001000000000
.....ATTGGACGCCCTCATGGCC............................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.................CATGGCCATCTCTGTCGTTATCCACACC.......................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................AGTTGACTACATGCGGCC..............1811.00100100000000000000
..................ATGGCCATCTCTGTCGT.................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGGCCATCTGTC.......1911.00100100000000000000
........GGACGCCCTCATGGCCATCTCT......................................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
..........................CTCTGTCGTTATCCACACC.......................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................GGCCATGGTAGTTGACTA.......................1811.00100100000000000000
......TTGGACGCCCTCATGGCC............................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.....ATTGGACGCCCTCATGGCCATCTCTGTC...................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................TTGACTACATGCGGCCATCTG.........2111.00100000000000001000
droSec2
CAGGTATTGGACGCCCTCATGGCTATCTCTGTCGTCATCCACACCCATTGGTAAGATATCCTTG-AGG-------------------------------CAAATTAAAC----------------------------------------CTTTACT---------------------------------TATATTTTCCTC---ATTC---A------------------------------------------------------------------------------------CCAAACGCAGGGGCGTGGAGGCCATGGTAGTTGACTACATGCGGCCATCTGTCGTTGGAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
........................ATCTCTGTCGTCATCCACACC.......................................................................................................................................................................................................................................................................................................................2112.0021100
........................................................................................................................................................................................................................................................................................................................................GACTACATGCGGCCATCTGTCGTTG...2512.0020020
...............................................................................................................................................................................................................................................................................................................................ATGGTAGTTGACTACATGCGG................2111.0010010
................................................................................................................................................................................................................................................................................................................................................GCGGCCATCTGTCGTTGGA.1911.0011000
...........................................................................................................................................................................................................................................................................................................................................TACATGCGGCCATCTGTCGTTGGA.2411.0010010
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGGCCATCTGTCGTTGG..2411.0010010
........................ATCTCTGTCGTCATCCACACCCATTGGG................................................................................................................................................................................................................................................................................................................2811.0011000
................................................................................................................................................................................................................................................................................................................................................GCGGCCATCTGTCGTTGGAA2011.0011000
........GGACGCCCTCATGGCTATCTC.......................................................................................................................................................................................................................................................................................................................................2111.0011000
..............................................................................................................................................................................................................................................................................................................................CATGGTAGTTGACTACATGCGGC...............2311.0010100
...........................................................................................................................................................................................................................................................................................................................GGCCATGGTAGTTGACTACA.....................2011.0011000
...GTATTGGACGCCCTCATGGCTAT..........................................................................................................................................................................................................................................................................................................................................2311.0011000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGGCCATCTGTCGTTG...2311.0010010
........................ATCTCTGTCGTCATCCACACCCATTGGGGC..............................................................................................................................................................................................................................................................................................................3011.0010010
.......................................................................................................................................................................................................TC---ATTC---A------------------------------------------------------------------------------------CCAAACGCAGGGGC..............................................2111.0010001
....................GGCTATCTCTGTCGTCATCCAC..........................................................................................................................................................................................................................................................................................................................2211.0011000
........................ATCTCTGTCGTCATCCACAC........................................................................................................................................................................................................................................................................................................................2011.0010010
..........................CTCTGTCGTCATCCACACCCATTGGGGC..............................................................................................................................................................................................................................................................................................................2811.0010100
...........................................................................................................................................................................................................................................................................................................................................TACATGCGGCCATCTGTC.......1811.0010010
........GGACGCCCTCATGGCTATCTCTGTCGTC................................................................................................................................................................................................................................................................................................................................2811.0010010
droYak3
CAGGTCTTGGACGCTCTTTTGGCCATCTCCGTCGTCATCCACACCCACTGGTAAGATATCCCAA-AGT-------------------------------AAAATCAAAC----------------------------------------TATTATT---------------------------------AATATTTTCCTT---ATTA---A------------------------------------------------------------------------------------CCAA-AACAGGGGTGTTGAGGCCATGGTAGTGGACTACATGCGGCCATCTGTCGTTGGAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
......................................................................................................................................................................................................................................................................................................................GTTGAGGCCATGGTAGTGGA..........................2013.00301000020000
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCCATGGTAGT.............................1912.00200000020000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGGCCATCTGTCGTTG...2312.00200000020000
.......................CATCTCCGTCGTCATCCACAC........................................................................................................................................................................................................................................................................................................................2111.00100100000000
....................................................................................................................................................................................................................................................................................................................................AGTGGACTACATGCGGCCATC...........2111.00100100000000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGGCCATCTGTCGT.....2111.00100001000000
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCCATGGTAGTGGACTACA.....................2711.00100000010000
............GCTCTTTTGGCCATCTCCGTCGTCATCC............................................................................................................................................................................................................................................................................................................................2811.00100100000000
.......................CATCTCCGTCGTCATCCACA.........................................................................................................................................................................................................................................................................................................................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGGCCATCTGTCGTT....2211.00101000000000
...........................................................................................................................................................................................................................................................................................................................................TACATGCGGCCATCTGTCGTT....2111.00100000010000
..................................................................................................................................................................................................................................................................................................................................GTAGTGGACTACATGCGGCCATCTGTC.......2711.00101000000000
.........................................................................................................................................................................................................................................................................................................................................ACTACATGCGGCCATCTGTCGTTG...2411.00100000010000
...................................................................................................................................................................................................................................................................................................................GGTGTTGAGGCCATGGTAGTGGACT........................2511.00101000000000
...GTCTTGGACGCTCTTTTGGCC............................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.AGGTCTTGGACGCTCTTTTGGC.............................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..GGTCTTGGACGCTCTTTTGGCC............................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..............................GTCGTCATCCACACCCACTGG.................................................................................................................................................................................................................................................................................................................2111.00101000000000
..........................................................................................................................................................................................................................................................................................................................AGGCCATGGTAGTGGACTACA.....................2111.00100000010000
................................CGTCATCCACACCCACTGGGGT..............................................................................................................................................................................................................................................................................................................2211.00101000000000
......................................................................................................................................................................................................................................................................................................................GTTGAGGCCATGGTAGTGGACTACATGC..................2811.00100000010000
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCCATGGTAGTGGAC.........................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................TGAGGCCATGGTAGTGGACTACA.....................2311.00100000010000
.....................................................................................................................................................................................................................................................................................................................TGTTGAGGCCATGGTAGTGGACTACA.....................2611.00101000000000
droEre2
CAGGTATTGGACGCGCTTTTGGCCATCTCCGTCGTCATCCACACTCACTGGTAAGATATC-TTA-AGT-------------------------------GAAATGAAAC----------------------------------------CATTATT---------------------------------GATATATTCCTC---GCTT---G------------------------------------------------------------------------------------CCAAACACAGGGGTGTTGAGGCGATGGTAGTGGACTACATGCGGCCATCTGTCGTTGGCASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
......................................................................................................................................................................................................................................................................................................................GTTGAGGCGATGGTAGTGGA..........................2014.0041000300
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGGCCATCTGTCGTT....2213.0030001200
......................................................................................................................................................................................................................................................................................................................GTTGAGGCGATGGTAGTGGACTACA.....................2512.0021000100
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCGATGGTAGTGGACTACA.....................2712.0020000200
......................................................................................................................................................................................................................................................................................................................GTTGAGGCGATGGTAGTG............................1812.0020000110
.........................................................................................................................................................................................................................................................................................................................GAGGCGATGGTAGTGGAC.........................1811.0010000100
........................................................................................................................................................................................................................................................................................................................TGAGGCGATGGTAGTGGACTACA.....................2311.0010000100
...........................TCCGTCGTCATCCACACTCACTGGGGT..............................................................................................................................................................................................................................................................................................................2711.0011000000
.....................................................................................................................................................................................................................................................................................................................................GTGGACTACATGCGGCCATC...........2011.0011000000
..........................................................................................................................................................................................................................................................................................................................................CTACATGCGGCCATCTGTCGTTGG..2411.0011000000
..................................................................................................................................................................................................................................................................................................................................GTAGTGGACTACATGCGG................1811.0010000100
.............................................................................................................................................................................................................................................................................................................................................CATGCGGCCATCTGTCGC.....1811.0010100000
..............................................................................................................................................................................................................................................................................................................................GATGGTAGTGGACTACATGC..................2011.0010001000
........................................................................................................................................................................................................................................................................................................................TGAGGCGATGGTAGTGGA..........................1811.0011000000
.............CGCTTTTGGCCATCTCCGTC...................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................................................................................................................................................................................................................................................................................................................................GGTAGTGGACTACATGCGGC...............2011.0010100000
................................................................................................................................................................................................................................................................................................................................TGGTAGTGGACTACATGCGGCC..............2211.0011000000
.......TGGACGCGCTTTTGGCCA...........................................................................................................................................................................................................................................................................................................................................1811.0011000000
.....................GCCATCTCCGTCGTCATCC............................................................................................................................................................................................................................................................................................................................1911.0011000000
.........GACGCGCTTTTGGCCATCTCCGT....................................................................................................................................................................................................................................................................................................................................2311.0010001000
.......................................................................................................................................................................................................................................................................................................................................GGACTACATGCGGCCATCTGTC.......2211.0010100000
...........................................................................................................................................................................................................................................................................................................................................TACATGCGGCCATCTGTCGTTGGCA2511.0011000000
.................................................................................................................................................................................................................................................................................................................GGGGTGTTGAGGCGATGGTAGT.............................2211.0010000100
..................................................................................................................................................................................................................................................................................................................................GTAGTGGACTACATGCGGC...............1911.0010000100
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCGATGGTAGTGGAC.........................2311.0011000000
......TTGGACGCGCTTTTGGCCA...........................................................................................................................................................................................................................................................................................................................................1911.0011000000
......................................................................................................................................................................................................................................................................................................................GTTGAGGCGATGGTAGTGGAC.........................2111.0010000010
.................................................................................................................................................................................................................................................................................................................GGGGTGTTGAGGCGATGGTAG..............................2111.0010000100
...................................................................................................................................................................................................................................................................................................................GGTGTTGAGGCGATGGTAGTGGACT........................2511.0011000000
.......................................................................................................................................................................................................................................................................................................................................GGACTACATGCGGCCATCTGTCGTT....2511.0011000000
.......................CATCTCCGTCGTCATCCACACTCACTGGG................................................................................................................................................................................................................................................................................................................2911.0011000000
...........................................................................................................................................................................................................................................................................................................................................TACATGCGGCCATCTGTCGTTGGC.2411.0011000000
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCGATGGTAGTG............................2011.0010100000
........GGACGCGCTTTTGGCCATCTCCGTCGTC................................................................................................................................................................................................................................................................................................................................2811.0011000000
.........................TCTCCGTCGTCATCCACACTCA.....................................................................................................................................................................................................................................................................................................................2211.0011000000
........................................................................................................................................................................................................................................................................................................................................GACTACATGCGGCCATCTGTCGTT....2411.0011000000
...............................................................................................................................................................................................................................................................................................................................................TGCGGCCATCTGTCGTTGGCA2111.0011000000
..............................................................................................................................................................................................................................................................................................................................GATGGTAGTGGACTACATGCGGCC..............2411.0010001000
................TTTTGGCCATCTCCGTCGT.................................................................................................................................................................................................................................................................................................................................1911.0011000000
.AGGTATTGGACGCGCTTTTGGCCATCTC.......................................................................................................................................................................................................................................................................................................................................2811.0011000000
............GCGCTTTTGGCCATCTCCGTCGTCA...............................................................................................................................................................................................................................................................................................................................2511.0011000000
..............................................................................................................................................................................................................................................................................................................................GATGGTAGTGGACTACATGCGGC...............2311.0010001000
......................................................................................................................................................................................................................................................................................................................GTTGAGGCGATGGTAGTGGACTAC......................2411.0010000100
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCGATGGTAGT.............................1911.0010000100
........................................................................................................................................................................................................................................................................................................................TGAGGCGATGGTAGTGGAC.........................1911.0011000000
.................................................................................................................................................................................................................................................................................................................GGGGTGTTGAGGCGATGGTAGTGGA..........................2511.0010000100
..............................................................................................................................................................................................................................................................................................................................................ATGCGGCCATCTGTCGTT....1811.0011000000
..................................................................................................................................................................................................................................................................................................................................GTAGTGGACTACATGCGGCC..............2011.0010100000
..............GCTTTTGGCCATCTCCGTCGTCATCCAC..........................................................................................................................................................................................................................................................................................................................2811.0011000000
.................................................................................................................................................................................................................................................................................................................GGGGTGTTGAGGCGATGGTAGTGGAC.........................2611.0010000100
....................................................................................................................................................................................................................................................................................................................GTGTTGAGGCGATGGTAGTGGG..........................2211.0010000100
...........................................................................................................................................................................................................................................................................................................................................TACATGCGGCCATCTGTCGTT....2111.0011000000
.............................................................................................................................................................................................................................................................................................................................CGATGGTAGTGGACTACATGC..................2111.0010001000

Generated: 10/20/2015 at 07:16 PM