ID:

dvi_17512

 Coordinate:

scaffold_13047:18462015-18462100 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.2 -11.8 -11.6

Flybase annnotation

exon [dvir_GLEANR_9912:1]; CDS [Dvir\GJ24648-cds]; CDS [Dvir\GJ24648-cds]; exon [dvir_GLEANR_9912:2]; intron [Dvir\GJ24648-in]

No Repeatable elements found

Sense Strand Reads

-------###########################################--------------------------------------------------------------------------------------##################################################
AATAAACATGTTGTCTTCTGTGCTACTGCGTGGCGTTGGACGTAGCAATGGTAATGACAATGGTTAACTGTAAATTTACGCATTTTATACGACAATTTTTTTTATTATATAACCTTGTCGTTTCGCATACCGACAGCTGCAAGCCTTATTAAATCCGTGCGTCTGTCGCCGCTGAAGGCCTACTCG
**************************************************..((((((((.(((((...(((((..........................)))))....)))))))))))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M027
male body		 M061
embryo
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060678
9x140_testes_total
 SRR060679
140x9_testes_total
 M028
head
 SRR060659
Argentina_testes_total
 SRR060665
9_females_carcasses_total
 V047
embryo
 SRR060672
9x160_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060657
140_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060683
160_testes_total
 V116
male body		 V053
head
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
............GTCTTCTGTGCTACTGCGTGGC........................................................................................................................................................ 22 0 1 3.00 3 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CTTCTGTGCTACTGCGTGGCGTT..................................................................................................................................................... 23 0 1 3.00 3 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......ATGTTGTCTTCTGTGCTACTGCGTGGC........................................................................................................................................................ 27 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TGTGCTACTGCGTGGCGTTGGA.................................................................................................................................................. 22 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TCTGTCGCCGCTGAAGGCCT..... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......CATGTTGTCTTCTGTGCTACTGCGTGGC........................................................................................................................................................ 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GCTACTGCGTGGCGTTGGACGTAGCA........................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GTCGCCGCTGAAGGCCTACTC. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GTTGTCTTCTGTGCTACTGCG............................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............GTCTTCTGTGCTACTGCGT........................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TCTTCTGTGCTACTGCGTGGCGTT..................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TTGTCGTTTCGCATACCGACA................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AACATGTTGTCTTCTGTGCTACTGCG............................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GCCTTATTAAATCCGTGCGTCTGTC................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................TGCGTGGCGTTGGACGTAGCA........................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................ATCCGTGCGTCTGTCGCCGCTGAAGGC....... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TGCGTCTGTCGCCGCTGAAGGCCC..... 24 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CGCCGCTAAAGGCCTACTCG 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GTCTGTCGCCGCTGAAGGCC...... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TGCGTCTGTCGCCGCTGAAGGCCT..... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................ATCCGTGCGTCTGTCGCCGCTGAAGGCC...... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TGGTCTTCTGTGCTACTGCGTGGC........................................................................................................................................................ 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................ACTGCGTGGCGTTGGACGTAGC............................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CTGTGCGTCTGTCGCCGCTGAAGGC....... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GTGCTACTGCGTGGCGTTGGACGT............................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TGCGTCTGTCGCCGCTGAAGGCC...... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................AATCCGTGCGTCTGTCGCCGCTGAAGGC....... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................CTGTCGCCGCTGAAGGCCTACT.. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................CTACTGCGTGGCGTTGGAC................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....ACATGTTGTCTTCTGTGCTAC................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................AATGCTGCAAGCCTTATTAAATCCGT............................ 26 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....AACATGTTGTCTTCTGTGCT.................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................GTTGGACGTAGCAATGCT...................................................................................................................................... 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GTGCGTCTGTCGCCGCTGAAGGCCC..... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GTTGGACGTAGCAATGCC...................................................................................................................................... 18 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CGTGGCGTTGGACGTAGCA........................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TTCTGTGCTACTGCGTGGCG....................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TCCGTGCGTCTGTCGCCGCTGAAGGCC...... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................AGCCTTATTAAATCCGTGCGTCT...................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CTGTGCTACTGCGTGGCGTTGGAC................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........TGTCTTCTGTGCTACTGCGTGGC........................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AACATGTTGTCTTCTGTGCTACTGC............................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................TTATTAAATCCGTGCGTCTGTCGCC................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CTTATTAAATCCGTGCGTCT...................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTCTTCTGTGCTACTGCGTGG......................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CTTCTGTGCTACTGCGTGGC........................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................TCTGTGCTACTGCGTGGCGTT..................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....AACATGTTGTCTTCTGTGCTACT............................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AACATGTTGTCTTCTGTGCTA................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CTGTGCTACTGCGTGGCGTTGGA.................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................TGCGTGGCGTTGGACGTA.............................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GCGTCTGTCGCCGCTGAAGGCC...... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GCTACTGCGTGGCGTTGGAC................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AGCCGTGCGTCTGTCGCCGCTGAAGG........ 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGGACGTAGCACTGATAATGTC................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGGACGGAGGAATGGTAATG.................................................................................................................................. 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................TGGACGGAGCACTGATAATGAC................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CACTGGTATTGACAACGGT.......................................................................................................................... 19 3 14 0.50 7 0 0 0 2 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 1
.........................................................................................................................................................TCCGTGCGTCCGTCACCGGTG............ 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................GTCCGTGTGGCGCCGCTGAA.......... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AAAGAGAATGGTTAACTG.................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTATTTGTACAACAGAAGACACGATGACGCACCGCAACCTGCATCGTTACCATTACTGTTACCAATTGACATTTAAATGCGTAAAATATGCTGTTAAAAAAAATAATATATTGGAACAGCAAAGCGTATGGCTGTCGACGTTCGGAATAATTTAGGCACGCAGACAGCGGCGACTTCCGGATGAGC
**************************************************..((((((((.(((((...(((((..........................)))))....)))))))))))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060678
9x140_testes_total
 SRR060675
140x9_ovaries_total
 M027
male body		 SRR060679
140x9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
..........................................................................................................................................................GGCACGCAGACAGCGGCGAC............ 20 0 1 1.00 1 0 1 0 0 0 0 0
.........................GACGCACCGCAACCTGCATCGTT.......................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
...........................CGCACCGCAACCTGCATCGTT.......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..........................................ATCGTTACCAAGACTGTCAC............................................................................................................................ 20 3 6 0.17 1 0 0 1 0 0 0 0
...........................................TCGTTACCAAGACTGTCAC............................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 1
..................................................................................AAAATAGGCTGTTACAGAAA.................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1 0
............................................................ACCAATTGACACTTATATAC.......................................................................................................... 20 3 20 0.05 1 0 0 0 0 1 0 0
..............................................................................................................................................CGGGAAAAGTTAGGCACG.......................... 18 3 20 0.05 1 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:18461965-18462150 + dvi_17512 AAT-AAACATGTTGTCTTCTGTGCTACTGCGTGGCGTTGGACGTAGCAATGGTAATGACAATGGTTAACTGTAAATT-TACGCATTT--TA------TA--CGACAATTTTTTTT--ATTATATAACCTTG--T---CGTTT---CGCAT--AC-CG-ACAGCTGCAAGCCTTATTAAATCCGTGCGTCTGTCGCCGCTGAAGGCCTACTCG
droMoj3 scaffold_6540:25960312-25960499 - ATA-AAACATGTTGTCTTCTGTACTTCTGCGTGGTGCAGCTCGCGGTAATGGTGAGTATAGTATTTAATTGCAAGTG-GAGCT-TTA--TT---T--CACCTGAAAAATGTTCTC--ATTATATAACCGCA--T---CGTACG-----AC--ACACCGACAGCTGCAACACTTATTAAATCCGTGCGTGTCTCGCCATTGAAGGCTTACTCC
droGri2 scaffold_15074:6238800-6238975 - ACT-AAACATGCTGTCATCTATTGTATTGCGTGGCGCAGCTCGCTGCAATGGTGTGTATATTATTAAACTGCAAATATATATGAGCA--TT------AGC-TCACAATCGTTTTT--ATTATATAACCGCA--C---CGA-------------------TAGCCGCAAATCTTGTTAAGTCCGTGCGTCTTACGCCACTGAAGGCCTACTCC
droWil2 scf2_1100000004921:3339566-3339770 + AATAAATCATGTCCATGTCTTTGGTAATGCGTGGCGCTCTCCGGTGCAATGGTGAGTTGACT-TTGGAATGCAAATTTGTAA---TGCTTGATTTTAAATGGTCAAACGACAAAC--ATTATATAACCATAAACAATTGCTTTTGGATACATTC-TAATTAGCCGCAAATCTCGTAAAATCGGCGCGCATCACGCCATTGAATGCATACTCC
dp5 2:12830522-12830716 - ATACAAGCATGTCTCTATCATTGGTCCTGCGTGGCGCCGTCCGGTGTAATGGTAAGCATTAA-ACCGACTGCCAGAT-TCCGCGGAG--CC------TGGCAGGAAACTGTCTTT--ATTATATAACCAAA--C---TGTTTGTTGGTATACCCGCAATTAGCCGCAAATCTCGTTAAGTCGGCGCGGATAACGCCACTGAAGGCCTATTCC
droPer2 scaffold_0:7627097-7627291 + ATACAAGCATGTCTCTATCATTGGTCCTGCGTGGCGCCGTCCGCTGTAATGGTAAGCATTAA-ACCGACTTCCAGAT-TCCGCGGAG--CC------TGGCAGGAAACTGTCTTT--ATTATATAACCAAA--C---TGTTTGTTGGTATACCCGCAATTAGCCGCAAATCTCGTTAAGTCGGCGCGAATAACGCCACTGAAGGCCTATTCA
droAna3 scaffold_13340:19947418-19947609 + CCC-AGACATGTCCCTCGCTCTGATCCTGCGTGGCGCTGCCCGTTGCAATGGTAAGGGTTCA-TCAGCCAGTCGATC-ATATGAATA--TT------TGCCGAAAAACAGCTTTT--ATTATATAACCAAT--C---CTTTTGTTGGTAT--CTGCAATTAGCCGCAAATCTCGTTAAATCGGCCCGTATCACGCCCCTGAAGGCGTACTCC
droBip1 scf7180000396413:2447400-2447590 - CC--CAACATGTCCCTGTCGCTGATCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGGATCA-TCAGATGGTCGATC-ATACGAATA--TT------TGCCTAAAAACAGCTTTT--ATTATATAACCAAA--C---CTTTTGTTGGTAT--CTGTATTTAGCCGCAAATCTCGTTAAATCGGCCCGTACCACGCCCCTGAAGGCGTACTCC
droKik1 scf7180000302639:2990814-2991005 + CCC-CAAGATGTCCCTGTCGCTGGTCCTGCGTGGCGCTGCCCGTTGCAATGGTAAGGCCCTT-CGATCTGGTCAATT-ACCCCAGTA--TT------TGCCGCAAAACAGCTGTT--ATTATATAACCAAA--C---TATTTGTTGGTAT--CCCTCTTTAGCCGCAAATCTCGTTAAATCGGCCCGCATCACGCCCCTGAAGAGCTATTCC
droFic1 scf7180000453800:1757248-1757438 - CC--AAACATGTCCCTTTCGCTGGTCCTGCGTGGCGCTGCCCGTTGCAATGGTAAGGACCCA-CTGGTTAGACATTC-ACCCGAATA--TT------TGCCGAAAAACAGCTTTT--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CCGCTATTAGCCGCAAATCTTGTTAAGGCGGCCCGGATCACGCCCCTGAAGAGTTACTCC
droEle1 scf7180000486474:638093-638282 - CC---AAAATGTCCCTCTCGCTGGTTCTGCGTGGCGCTCTACGTTGCAATGGTAAGGACCTC-CGGGCTGGTCAATT-ACACGATTG--TA------AGCCTCAAAACAGGCATT--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CCGCTTTTAGCCGTAAATCTCGTCAAGTCGGCCCGCATCACGCCCCTGAAGAGCTACTCC
droRho1 scf7180000777205:37949-38139 - CC--CAAAATGTCCCTCTCGATGGTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGACCTC-CGGGCTGGTCAATT-ACCCGATTA--TA------AGCCGTAAAACAGCTTTT--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CCGCTTTTAGCCGCAAATCTCGTCAAGTCGGCCCGCATCACGCCCCTGAAGAGCTACTCC
droBia1 scf7180000302075:5142030-5142219 - C---CAACATGTCCCTTTCGCTGGTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGTTCCG-CCGTGTGGTCAATG-GCCCCCGTA--TT------TGCGGCAAAACAGCTTTT--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CCGCTATTAGCCGCAAATCTCGTTAAGGCGGCCCGCATCACTCCCCTGAAGAGCTACTCC
droTak1 scf7180000415765:1338924-1339115 + C---CAACATGTCCCTCTCGTTGCTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGCAGCCA-TCGGCTAGTCAATT-GCCCCACTA--TT------TGCCGCAAAACAGCTTTTTAATTATATAACCAAA--C---CGTTTGTTGGTAT--CCGCTATTAGCCGCAAATCTCGTTAAGTCGGCCCGCCTGACGCCCCTGAAGAGCTACTCC
droEug1 scf7180000409798:801725-801915 + C---CAATATGTCTCTCTCGCTGCTCCTGCGAGGCGCTGTCCGATGCAATGGTAATGACCCA-CTGGCTGGCTAGTT-GTCCGTTTA--TT------TGCCACAAAACATCTTTTT-ATTATATAACCAAA--C---CGATTGTTGGTAT--CCACTTTTAGCCGCAAATCTCGTCAAGTCGGCGCGTATCGCACCCCTGAAGAGTTACTCC
dm3 chr3R:19586033-19586221 - C---CAACATGTCCCTCTCGTTGCTTCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGACCCA-CTGGATGGCAAATC-GCCTTGTTA--TT------GGACGCAAAACAGCTTTC--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CC-CAATTAGCCGCAAATCTTGTTAAGTCGGCTCGCATCACTCCCCTGAAGAGCTACTCC
droSim2 3r:19136844-19137033 - CC--CAACATGTCCCTCTCGTTGCTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGACCCA-CTGGATGGCCAAGC-GCCTTATTA--TT------GGCCGCAAAACAGCTTTC--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CC-CAATTAGCCGCAAATCTTGTTAAGTCGGCTCGCATCACTCCCCTGAAGAGCTACTCC
droSec2 scaffold_0:19944331-19944520 - CC--CAACATGTCCCTCTCGTTGCTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGACCCA-CTGGATGGCCAATC-GCCTTATTA--TT------GGCCGCAAAACCGCTTTC--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CC-CAATTAGCCGCTAATCTTGTTAAGTCGGCTCGTATCACTCCCCTGAAGAGCTACTCC
droYak3 3R:20492523-20492712 - CC--CAACATGACCCTCTCGTTGCTCTTGCGTAGCGCTGTCCGTTGCAATGGTAAGGATCCA-CTGGATGGCCAATG-GCTTTACTA--TT------GTCCGCAAAACAGCTTTC--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CC-CAATTAGCCGCAAATCTTGTTAAGTCGGCTCGCATCACGCCCCTGAAGAGCTACTCC
droEre2 scaffold_4820:8458318-8458508 + TCC-CAACATGTCCCTCTCGTTGCTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGGCCCA-CTGGATGGCCAATT-GCCTCACTA--TT------GGCCGCAAAACAACATTC--ATTATATAACCAAA--C---CGTTTGTTGGAAT--CC-CAATTAGCCGCAAATCTTGTTAAGTCGGCGCGCATCACGCCCCTCAAGAGCTACTCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AAT-AAACATGTTGTCTTCTGTGCTACTGCGTGGCGTTGGACGTAGCAATGGTAATGACAATGGTTAACTGTAAATT-TACGCATTT--TA------TA--CGACAATTTTTTTT--ATTATATAACCTTG--T---CGTTT---CGCAT--AC-CG-ACAGCTGCAAGCCTTATTAAATCCGTGCGTCTGTCGCCGCTGAAGGCCTACTCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............GTCTTCTGTGCTACTGCGTGGC.................................................................................................................................................................................2213.003001100000000000000100000000000000000000000000000000000000000000
...............CTTCTGTGCTACTGCGTGGCGTT..............................................................................................................................................................................2313.003000100000000000001000000000000000000000000000000000000000001000
........ATGTTGTCTTCTGTGCTACTGCGTGGC.................................................................................................................................................................................2713.003002100000000000000000000000000000000000000000000000000000000000
...................TGTGCTACTGCGTGGCGTTGGA...........................................................................................................................................................................2212.002001000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TCTGTCGCCGCTGAAGGCCT.....2012.002200000000000000000000000000000000000000000000000000000000000000
.......CATGTTGTCTTCTGTGCTACTGCGTGGC.................................................................................................................................................................................2812.002000200000000000000000000000000000000000000000000000000000000000
......................GCTACTGCGTGGCGTTGGACGTAGCA....................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................GTCGCCGCTGAAGGCCTACTC.2111.001000000000000000000100000000000000000000000000000000000000000000
..........GTTGTCTTCTGTGCTACTGCG.....................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.............GTCTTCTGTGCTACTGCGT....................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..............TCTTCTGTGCTACTGCGTGGCGTT..............................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................TTG--T---CGTTT---CGCAT--AC-CG-ACA...................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.....AACATGTTGTCTTCTGTGCTACTGCG.....................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................GCCTTATTAAATCCGTGCGTCTGTC...................2511.001000000000000000000000000000000000000000000000000000000000000010
...........................TGCGTGGCGTTGGACGTAGCA....................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................ATCCGTGCGTCTGTCGCCGCTGAAGGC.......2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TGCGTCTGTCGCCGCTGAAGGCCC.....2411.001010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................GTCTGTCGCCGCTGAAGGCC......2011.001100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TGCGTCTGTCGCCGCTGAAGGCCT.....2411.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................ATCCGTGCGTCTGTCGCCGCTGAAGGCC......2811.001001000000000000000000000000000000000000000000000000000000000000
.........................ACTGCGTGGCGTTGGACGTAGC.....................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
....................GTGCTACTGCGTGGCGTTGGACGT........................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................TGCGTCTGTCGCCGCTGAAGGCC......2311.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AATCCGTGCGTCTGTCGCCGCTGAAGGC.......2811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CTGTCGCCGCTGAAGGCCTACT..2211.001100000000000000000000000000000000000000000000000000000000000000
.......................CTACTGCGTGGCGTTGGAC..........................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
......ACATGTTGTCTTCTGTGCTAC.........................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.....AACATGTTGTCTTCTGTGCT...........................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................GTGCGTCTGTCGCCGCTGAAGGCCC.....2511.001100000000000000000000000000000000000000000000000000000000000000
...................................GTTGGACGTAGCAATGCC...............................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.............................CGTGGCGTTGGACGTAGCA....................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
................TTCTGTGCTACTGCGTGGCG................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TCCGTGCGTCTGTCGCCGCTGAAGGCC......2711.001000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................AGCCTTATTAAATCCGTGCGTCT......................2311.001000000000000000000100000000000000000000000000000000000000000000
..................CTGTGCTACTGCGTGGCGTTGGAC..........................................................................................................................................................................2411.001000000000000000000010000000000000000000000000000000000000000000
............TGTCTTCTGTGCTACTGCGTGGC.................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.....AACATGTTGTCTTCTGTGCTACTGC......................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TTATTAAATCCGTGCGTCTGTCGCC................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................CTTATTAAATCCGTGCGTCT......................2011.001000000000000000100000000000000000000000000000000000000000000000
............TGTCTTCTGTGCTACTGCGTGG..................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
...............CTTCTGTGCTACTGCGTGGC.................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................TCTGTGCTACTGCGTGGCGTT..............................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.....AACATGTTGTCTTCTGTGCTACT........................................................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
.....AACATGTTGTCTTCTGTGCTA..........................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..................CTGTGCTACTGCGTGGCGTTGGA...........................................................................................................................................................................2311.001000000000000000000000000000000000100000000000000000000000000000
...........................TGCGTGGCGTTGGACGTA.......................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GCGTCTGTCGCCGCTGAAGGCC......2211.001001000000000000000000000000000000000000000000000000000000000000
......................GCTACTGCGTGGCGTTGGAC..........................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
ATA-AAACATGTTGTCTTCTGTACTTCTGCGTGGTGCAGCTCGCGGTAATGGTGAGTATAGTATTTAATTGCAAGTG-GAGCT-TTA--TT---T--CACCTGAAAAATGTTCTC--ATTATATAACCGCA--T---CGTACG-----AC--ACACCGACAGCTGCAACACTTATTAAATCCGTGCGTGTCTCGCCATTGAAGGCTTACTCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................TAAATCCGTGCGTGTCTCGCC................2111.001001000
.............GTCTTCTGTACTTCTGCGTGGTGCA..............................................................................................................................................................................2511.001100000
............TGTCTTCTGTACTTCTGCGTGGTGC...............................................................................................................................................................................2511.001100000
.................................................................................................................................................................................AATCCGTGCGTGTCTCGCCATTGA...........2411.001100000
...............................TGGTGCAGCTCGCGGTAAT..................................................................................................................................................................1911.001100000
.........TGTTGTCTTCTGTACTTCT........................................................................................................................................................................................1911.001100000
................................................................................................................................................................................AAATCCGTGCGTGTCTCGCC................2011.001100000
droGri2
ACT-AAACATGCTGTCATCTATTGTATTGCGTGGCGCAGCTCGCTGCAATGGTGTGTATATTATTAAACTGCAAATATATATGAGCA--TT------AGC-TCACAATCGTTTTT--ATTATATAACCGCA--C---CGA-------------------TAGCCGCAAATCTTGTTAAGTCCGTGCGTCTTACGCCACTGAAGGCCTACTCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................GTCTTACGCCACTGAAGGC.......1911.00110
..................................................................................................................................................................................GTCCGTGCGTCTTACGCCACT.............2111.00110
droWil2
AATAAATCATGTCCATGTCTTTGGTAATGCGTGGCGCTCTCCGGTGCAATGGTGAGTTGACT-TTGGAATGCAAATTTGTAA---TGCTTGATTTTAAATGGTCAAACGACAAAC--ATTATATAACCATAAACAATTGCTTTTGGATACATTC-TAATTAGCCGCAAATCTCGTAAAATCGGCGCGCATCACGCCATTGAATGCATACTCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................AATGCGTGGCGCTCTCCGGTGC.....................................................................................................................................................................2213.00301110
..........................ATGCGTGGCGCTCTCCGGTGCA....................................................................................................................................................................2212.00202000
...............TGTCTTTGGTAATGCGTGGC.................................................................................................................................................................................2011.00100100
...................TTTGGTAATGCGTGGCGCTCTCCGGTG......................................................................................................................................................................2711.00101000
.........................AATGCGTGGCGCTCTCCGGTG......................................................................................................................................................................2111.00100010
................GTCTTTGGTAATGCGTGGC.................................................................................................................................................................................1911.00100010
......................GGTAATGCGTGGCGCTCTCCGGTGCAATG.................................................................................................................................................................2911.00100100
.............................CGTGGCGCTCTCCGGTGCAATGC................................................................................................................................................................2311.00101000
.........................AATGCGTGGCGCTCTCCGGTGCA....................................................................................................................................................................2311.00100100
AATAAATCATGTCCATGTCTTTG.............................................................................................................................................................................................2311.00100010
..............................................................................................................................................................................TAAAATCGGCGCGCATCACGC.................2111.00100100
dp5
ATACAAGCATGTCTCTATCATTGGTCCTGCGTGGCGCCGTCCGGTGTAATGGTAAGCATTAA-ACCGACTGCCAGAT-TCCGCGGAG--CC------TGGCAGGAAACTGTCTTT--ATTATATAACCAAA--C---TGTTTGTTGGTATACCCGCAATTAGCCGCAAATCTCGTTAAGTCGGCGCGGATAACGCCACTGAAGGCCTATTCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................GCGTGGCGCCGTCCGGTGTA....................................................................................................................................................................2012.0020100010000
...............................................................................................................................................................................TAAGTCGGCGCGGATAACGC.................2011.0010100000000
...................................................................................................................................................................CGCAAATCTCGTTAAGTCGGC............................2111.0010100000000
.........TGTCTCTATCATTGGTCCTGCG.....................................................................................................................................................................................2211.0010100000000
...CAAGCATGTCTCTATCATTGGTCCTGC......................................................................................................................................................................................2711.0010100000000
.......................................................................................................................................................................AATCTCGTTAAGTCGGCGCG.........................2011.0010100000000
..........................................................................................................................................................................CTCGTTAAGTCGGCGCGGATA.....................2111.0010100000000
.....................TGGTCCTGCGTGGCGCCGTCC..........................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................AATCTCGTTAAGTCGGCGCGG........................2111.0010100000000
.................................................................................................................................................................................AGTCGGCGCGGATAACGCCA...............2011.0010000001000
........................TCCTGCGTGGCGCCGTCCG.........................................................................................................................................................................1911.0010100000000
...........................................................................................................................................................................TCGTTAAGTCGGCGCGGA.......................1811.0010100000000
.......................................................................................................................................................................AATCTCGTTAAGTCGGCGC..........................1911.0010100000000
...................................................................................................................................................................CGCAAATCTCGTTAAGTCGGCGCG.........................2411.0010000100000
....................TTGGTCCTGCGTGGCGCCGTCCGGTG......................................................................................................................................................................2611.0010100000000
...............TATCATTGGTCCTGCGTGGCGCCG.............................................................................................................................................................................2411.0010100000000
...................ATTGGTCCTGCGTGGCGCCG.............................................................................................................................................................................2011.0010100000000
.....................TGGTCCTGCGTGGCGCCGTCCGGT.......................................................................................................................................................................2411.0010100000000
..................CATTGGTCCTGCGTGGCGCC..............................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................CCGCAAATCTCGTTAAGTC...............................1911.0010100000000
.................TCATTGGTCCTGCGTGGCG................................................................................................................................................................................1911.0010100000000
..........................................................................................................................ATAACCAAA--C---TGTTTGTTGGT................................................................2111.0010100000000
droPer2
ATACAAGCATGTCTCTATCATTGGTCCTGCGTGGCGCCGTCCGCTGTAATGGTAAGCATTAA-ACCGACTTCCAGAT-TCCGCGGAG--CC------TGGCAGGAAACTGTCTTT--ATTATATAACCAAA--C---TGTTTGTTGGTATACCCGCAATTAGCCGCAAATCTCGTTAAGTCGGCGCGAATAACGCCACTGAAGGCCTATTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................GCGCCGTCCGCTGTAATGCC...............................................................................................................................................................2013.003300000
...CAAGCATGTCTCTATCATTGGTCC.........................................................................................................................................................................................2411.001010000
.......................................................................................................................................................................AATCTCGTTAAGTCGGCGCGAATAACG..................2711.001010000
....................................................................................................................................................................GCAAATCTCGTTAAGTCGGC............................2011.001010000
droAna3
CCC-AGACATGTCCCTCGCTCTGATCCTGCGTGGCGCTGCCCGTTGCAATGGTAAGGGTTCA-TCAGCCAGTCGATC-ATATGAATA--TT------TGCCGAAAAACAGCTTTT--ATTATATAACCAAT--C---CTTTTGTTGGTAT--CTGCAATTAGCCGCAAATCTCGTTAAATCGGCCCGTATCACGCCCCTGAAGGCGTACTCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................CTGATCCTGCGTGGCGCTGCCC..........................................................................................................................................................................2213.003210000
.................GCTCTGATCCTGCGTGGCGC...............................................................................................................................................................................2013.003010011
.............CCTCGCTCTGATCCTGCGTGGCGCTGCCC..........................................................................................................................................................................2912.002200000
..............CTCGCTCTGATCCTGCGTGGCGCTGCCC..........................................................................................................................................................................2812.002200000
....AGACATGTCCCTCGCTCT..............................................................................................................................................................................................1811.001010000
...............TCGCTCTGATCCTGCGTGGCGC...............................................................................................................................................................................2211.001000010
..............CTCGCTCTGATCCTGCGTGG..................................................................................................................................................................................2011.001100000
..............CTCGCTCTGATCCTGCGTGGCGCTGCC...........................................................................................................................................................................2711.001100000
.........TGTCCCTCGCTCTGATCCTGCGTGGCG................................................................................................................................................................................2711.001100000
......ACATGTCCCTCGCTCTGATCC.........................................................................................................................................................................................2111.001100000
..................CTCTGATCCTGCGTGGCGCTGCCC..........................................................................................................................................................................2411.001010000
..............CTCGCTCTGATCCTGCGTGGCGC...............................................................................................................................................................................2311.001010000
.........TGTCCCTCGCTCTGATCCT........................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................CAAATCTCGTTAAATCGGCCCGTATC.....................2611.001010000
....................CTGATCCTGCGTGGCGCT..............................................................................................................................................................................1811.001100000
.................................................TGGTAAGGGTTCA-TCAGCCAGTCGAT........................................................................................................................................2611.001100000
.............CCTCGCTCTGATCCTGCG.....................................................................................................................................................................................1811.001100000
...............TCGCTCTGATCCTGCGTGGCGCT..............................................................................................................................................................................2311.001000010
....AGACATGTCCCTCGCTCTGATCCTG.......................................................................................................................................................................................2511.001100000
.......................ATCCTGCGTGGCGCTGCCCGTT.......................................................................................................................................................................2211.001100000
..........................CTGCGTGGCGCTGCCCGTTGCAATGCC...............................................................................................................................................................2711.001100000
.................GCTCTGATCCTGCGTGGCG................................................................................................................................................................................1911.001000010
......ACATGTCCCTCGCTCTGATC..........................................................................................................................................................................................2011.001010000
.................GCTCTGATCCTGCGTGGCGCC..............................................................................................................................................................................2111.001010000
..................CTCTGATCCTGCGTGGCGC...............................................................................................................................................................................1911.001100000
..........GTCCCTCGCTCTGATCCTGCGTGGC.................................................................................................................................................................................2511.001010000
................CGCTCTGATCCTGCGTGGC.................................................................................................................................................................................1911.001001000
........ATGTCCCTCGCTCTGATCCTGCGTG...................................................................................................................................................................................2511.001010000
..................................................................................................................................................................................ATCGGCCCGTATCACGCCCCTGAA..........2411.001100000
...........................TGCGTGGCGCTGCCCGTTGCAAT..................................................................................................................................................................2311.001100000
.....GACATGTCCCTCGCTCTGAT...........................................................................................................................................................................................2011.001100000
.CC-AGACATGTCCCTCGCTCTGATCCTGC......................................................................................................................................................................................2811.001100000
.....................TGATCCTGCGTGGCGCTGCC...........................................................................................................................................................................2011.001100000
........................................................................................................................................................................ATCTCGTTAAATCGGCCCG.........................1911.001100000
...........................................................................................................................................................................TCGTTAAATCGGCCCGTATCAC...................2211.001100000
.........TGTCCCTCGCTCTGATCCTGC......................................................................................................................................................................................2111.001100000
........ATGTCCCTCGCTCTGATCCTGCGT....................................................................................................................................................................................2411.001100000
.........TGTCCCTCGCTCTGATCCTGCGTG...................................................................................................................................................................................2411.001100000
...........................................................................................................................................................................TCGTTAAATCGGCCCGTATCA....................2111.001100000
......................GATCCTGCGTGGCGCTGCCC..........................................................................................................................................................................2011.001100000
......................GATCCTGCGTGGCGCTGCC...........................................................................................................................................................................1911.001100000
droBip1
CC--CAACATGTCCCTGTCGCTGATCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGGATCA-TCAGATGGTCGATC-ATACGAATA--TT------TGCCTAAAAACAGCTTTT--ATTATATAACCAAA--C---CTTTTGTTGGTAT--CTGTATTTAGCCGCAAATCTCGTTAAATCGGCCCGTACCACGCCCCTGAAGGCGTACTCCSizeHit CountTotal NormTotal
No Reads
droKik1
CCC-CAAGATGTCCCTGTCGCTGGTCCTGCGTGGCGCTGCCCGTTGCAATGGTAAGGCCCTT-CGATCTGGTCAATT-ACCCCAGTA--TT------TGCCGCAAAACAGCTGTT--ATTATATAACCAAA--C---TATTTGTTGGTAT--CCCTCTTTAGCCGCAAATCTCGTTAAATCGGCCCGCATCACGCCCCTGAAGAGCTATTCCSizeHit CountTotal NormTotal
No Reads
droFic1
CC--AAACATGTCCCTTTCGCTGGTCCTGCGTGGCGCTGCCCGTTGCAATGGTAAGGACCCA-CTGGTTAGACATTC-ACCCGAATA--TT------TGCCGAAAAACAGCTTTT--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CCGCTATTAGCCGCAAATCTTGTTAAGGCGGCCCGGATCACGCCCCTGAAGAGTTACTCCSizeHit CountTotal NormTotal
No Reads
droEle1
CC---AAAATGTCCCTCTCGCTGGTTCTGCGTGGCGCTCTACGTTGCAATGGTAAGGACCTC-CGGGCTGGTCAATT-ACACGATTG--TA------AGCCTCAAAACAGGCATT--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CCGCTTTTAGCCGTAAATCTCGTCAAGTCGGCCCGCATCACGCCCCTGAAGAGCTACTCCSizeHit CountTotal NormTotal
No Reads
droRho1
CC--CAAAATGTCCCTCTCGATGGTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGACCTC-CGGGCTGGTCAATT-ACCCGATTA--TA------AGCCGTAAAACAGCTTTT--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CCGCTTTTAGCCGCAAATCTCGTCAAGTCGGCCCGCATCACGCCCCTGAAGAGCTACTCCSizeHit CountTotal NormTotal
No Reads
droBia1
C---CAACATGTCCCTTTCGCTGGTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGTTCCG-CCGTGTGGTCAATG-GCCCCCGTA--TT------TGCGGCAAAACAGCTTTT--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CCGCTATTAGCCGCAAATCTCGTTAAGGCGGCCCGCATCACTCCCCTGAAGAGCTACTCCSizeHit CountTotal NormTotal
No Reads
droTak1
C---CAACATGTCCCTCTCGTTGCTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGCAGCCA-TCGGCTAGTCAATT-GCCCCACTA--TT------TGCCGCAAAACAGCTTTTTAATTATATAACCAAA--C---CGTTTGTTGGTAT--CCGCTATTAGCCGCAAATCTCGTTAAGTCGGCCCGCCTGACGCCCCTGAAGAGCTACTCCSizeHit CountTotal NormTotal
No Reads
droEug1
C---CAATATGTCTCTCTCGCTGCTCCTGCGAGGCGCTGTCCGATGCAATGGTAATGACCCA-CTGGCTGGCTAGTT-GTCCGTTTA--TT------TGCCACAAAACATCTTTTT-ATTATATAACCAAA--C---CGATTGTTGGTAT--CCACTTTTAGCCGCAAATCTCGTCAAGTCGGCGCGTATCGCACCCCTGAAGAGTTACTCCSizeHit CountTotal NormTotal
No Reads
dm3
C---CAACATGTCCCTCTCGTTGCTTCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGACCCA-CTGGATGGCAAATC-GCCTTGTTA--TT------GGACGCAAAACAGCTTTC--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CC-CAATTAGCCGCAAATCTTGTTAAGTCGGCTCGCATCACTCCCCTGAAGAGCTACTCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................CTCGTTGCTTCTGCGTGGCGCTGTCCG.........................................................................................................................................................................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................CTCGCATCACTCCCCTGAAGAGC......2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGGCGCTGTCCGTTGCAA...................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GCGTGGCGCTGTCCGTTGCA....................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CGCAAATCTTGTTAAGTCGGCTCG.........................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................ATCTTGTTAAGTCGGCTCGCATCA....................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGCGTGGCGCTGTCCGTTGC.....................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCTTCTGCGTGGCGCTGTCC..........................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TCTTGTTAAGTCGGCTCGCATCACT..................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
...........................................................................................................................................................................TTGTTAAGTCGGCTCGCATCA....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000
................CTCGTTGCTTCTGCGTGGCG................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................TGCGTGGCGCTGTCCGTTGCA....................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TCTTGTTAAGTCGGCTCGC........................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000
...............TCTCGTTGCTTCTGCGTGGCG................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................GCAAATCTTGTTAAGTCGGCTCGC........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TCGCATCACTCCCCTGAAGAGCTAC...2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CATGTCCCTCTCGTTGCTTCTGCGTG...................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TCGGCTCGCATCACTCCCCTG............2112.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCTGCGTGGCGCTGTCCGTTGCAAT..................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACATGTCCCTCTCGTTGCT...........................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TCGCATCACTCCCCTGAAGAGCTACTCC2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCTTCTGCGTGGCGCTGTCCGTT.......................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............TCTCGTTGCTTCTGCGTGGCGCTGT............................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CGCATCACTCCCCTGAAGAGC......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................................................................................................................................................................GTTAAGTCGGCTCGCATC.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATGTCCCTCTCGTTGCTTCTGCGTGGCGCT..............................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCTCGTTGCTTCTGCGTGGCGCT..............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CCCTCTCGTTGCTTCTGCGTGGCGCT..............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................ACCAAA--C---CGTTTGTTGGTAT--CC-CAATTAG..................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GTAAGGACCCA-CTGGATGG.............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................CTTGTTAAGTCGGCTCGC........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................GTGGCGCTGTCCGTTGCAA...................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTCTCGTTGCTTCTGCGTGGCGCTGT............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AATCTTGTTAAGTCGGCTCGCAT......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................TCTTGTTAAGTCGGCTCGCATCACTCCC...............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........TCCCTCTCGTTGCTTCTGCGTGGCGCTG.............................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................GCTTCTGCGTGGCGCTGTCCGTTGCAAT..................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GTTAAGTCGGCTCGCATCA....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....................................................................................................................................................................................GGCTCGCATCACTCCCCTGAA..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGTTGCTTCTGCGTGGCGC...............................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGTCCCTCTCGTTGCTTCTGCGTGG..................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AACAGCTTTC--ATTATATAACCA...................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................ATCTTGTTAAGTCGGCTCGCATCAC...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTGGCGCTGTCCGTTGCAAT..................................................................................................................................................................2011.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATGTCCCTCTCGTTGCTTCTGCT.....................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................GCAAATCTTGTTAAGTCGGCTCGCATC.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATGTCCCTCTCGTTGCTTCTGCGTGG..................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................ATCTTGTTAAGTCGGCTCGCA.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...................GTTGCTTCTGCGTGGCGC...............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTGGCGCTGTCCGTTGCAATGC................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTGGCGCTGTCCGTTGCAATGCC...............................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTGCTTCTGCGTGGCGCTGTCCGT........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................TTAAGTCGGCTCGCATCACTCCC...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAAGTCGGCTCGCATCACTCCCCATC...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCTGCGTGGCGCTGTCCGTTG......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCTTCTGCGTGGCGCTGTCCG.........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
............................GCGTGGCGCTGTCCGTTGCAATG.................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGCGTGGCGCTGTCCGTT.......................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CGCATCACTCCCCTGAAGAGT......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCCCTCTCGTTGCTTCTGCGTGGCGC...............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CCTCTCGTTGCTTCTGCGTGGCG................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................GCCGCAAATCTTGTTAAGTCG..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................CGCATCACTCCCCTGAAGAGCT.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............CTCTCGTTGCTTCTGCGTGGCG................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TCTTGTTAAGTCGGCTCGCA.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.........................TCTGCGTGGCGCTGTCCGTTGCAATGCC...............................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................TAAGTCGGCTCGCATCACTCCCCTGA...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
C---CAACATGTCCCTCTCGTTGCTTC.........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCTGCGTGGCGCTGTCCGTTGC.....................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTCTCGTTGCTTCTGCGTGGCGCTGG............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................GTTGCTTCTGCGTGGCGCTGTC...........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCTTCTGCGTGGCGCTGTCCG.........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TCTTGTTAAGTCGGCTCGCATCAC...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTCTCGTTGCTTCTGCGT....................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CACTCCCCTGAAGAGCTACTCC2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TGTTA--TT------GGACGCAAAACAGCT....................................................................................................2211.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCGTTGCTTCTGCGTGGCGC...............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TTGTTAAGTCGGCTCGCA.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAAGTCGGCTCGCATCACTCCC...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATGTCCCTCTCGTTGCTTCT........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CGTGGCGCTGTCCGTTGCAAT..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCTCGTTGCTTCTGCGTGGC.................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TTA--TT------GGACGCAAAACAGCTT...................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TCGCATCACTCCCCTGAAGAGCTACTC.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CATCACTCCCCTGAAGAGCTACT..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................GTCGGCTCGCATCACTCC................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCGTTGCTTCTGCGTGGCGCTGTCCG.........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................ATCACTCCCCTGAAGAGC......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................TTATATAACCAAA--C---CGTTTG.....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................TGCGTGGCGCTGTCCGTTGCAA...................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CCTCTCGTTGCTTCTGCGTGG..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......CATGTCCCTCTCGTTGCTTC.........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CGCATCACTCCCCTGAAGA........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAAGTCGGCTCGCATCACTCCCCTGAA..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................ATCACTCCCCTGAAGAGCT.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TCTTGTTAAGTCGGCTCGCATCACTC.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTCTCGTTGCTTCTGCGTGGCGCTGTC...........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TTGTTAAGTCGGCTCGCATCACTCCC...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................AAGTCGGCTCGCATCACT..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................TCACTCCCCTGAAGAGCTA....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
C---CAACATGTCCCTCTCGT...............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATGTCCCTCTCGTTGCTTC.........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTGCGTGGCGCTGTCCGTTGC.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TCCCCTGAAGAGCTACTCC1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................AATCTTGTTAAGTCGGCTCGCATCACT..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................GCAAATCTTGTTAAGTCGGCT...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TCTTGTTAAGTCGGCTCGCAT......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GCTCGCATCACTCCCCTGAAGAGC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AACATGTCCCTCTCGTTGCTTCTGCGT....................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................TAAGTCGGCTCGCATCACTCC................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GTCCCTCTCGTTGCTTCTGCGT....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GTTGCTTCTGCGTGGCGCTGTCCGTTGCAA...................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................GCATCACTCCCCTGAAGAG.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................AGGACCCA-CTGGATGGCA...........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGCGCTGTCCGTTGCAATGCCG..............................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCTCGTTGCTTCTGCGTGATC................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CC--CAACATGTCCCTCTCGTTGCTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGACCCA-CTGGATGGCCAAGC-GCCTTATTA--TT------GGCCGCAAAACAGCTTTC--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CC-CAATTAGCCGCAAATCTTGTTAAGTCGGCTCGCATCACTCCCCTGAAGAGCTACTCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................CGCAAATCTTGTTAAGTCGGCT...........................2215.00530200000000000000
.....................................................................................................................................................................CAAATCTTGTTAAGTCGGCTC..........................2113.00310000000000002000
...............................................................................................................................................................................TAAGTCGGCTCGCATCACTCC................2112.00202000000000000000
..................................................................................................................................................................CCGCAAATCTTGTTAAGTCGGCT...........................2312.00200200000000000000
......................................................................................................................................................................AAATCTTGTTAAGTCGGCTC..........................2012.00200000000000002000
.............................CGTGGCGCTGTCCGTTGC.....................................................................................................................................................................1812.00200002000000000000
............................................................................................................................................................................TGTTAAGTCGGCTCGCATCACTC.................2311.00100000000000001000
...................GTTGCTCCTGCGTGGCGCTGTCC..........................................................................................................................................................................2311.00100000000000100000
........ATGTCCCTCTCGTTGCTCCTGCGTGGC.................................................................................................................................................................................2711.00100000000000100000
......................................................................................................................................................................AAATCTTGTTAAGTCGGCTCGCATCA....................2611.00100000000000010000
.........................................................................................................................................................................TCTTGTTAAGTCGGCTCGCATCACT..................2511.00100000000000010000
.........................................................................................................................................................................TCTTGTTAAGTCGGCTCGCATC.....................2211.00100000000000001000
....................................................................................................................................................................GCAAATCTTGTTAAGTCGGCTTTT........................2411.00100000000000001000
..........GTCCCTCTCGTTGCTCCTGCGTGGC.................................................................................................................................................................................2511.00100010000000000000
........................................................................................................................................................................ATCTTGTTAAGTCGGCTCG.........................1911.00100000000000001000
.....................................................................................................................................................................CAAATCTTGTTAAGTCGGCT...........................2011.00110000000000000000
...................................................................................................................................................................................TCGGCTCGCATCACTCCCCTGAAAGC.......2611.00100000000001000000
....CAACATGTCCCTCTCGTTGCTC..........................................................................................................................................................................................2211.00100001000000000000
..........................................................................AGC-GCCTTATTA--TT------GGCC...............................................................................................................1811.00100000100000000000
..............................................................................................................................................................................................CACTCCCCTGAAGAGCTACTCC2211.00100010000000000000
........................................................................................................................................................................ATCTTGTTAAGTCGGCTC..........................1811.00100100000000000000
....................................................................................................................................................................................CGGCTCGCATCACTCCCCTG............2011.00100000000000001000
.........................................................................................................................................................................TCTTGTTAAGTCGGCTCGCAT......................2111.00100000000000001000
..................................................................................................................................................................................GTCGGCTCGCATCACTCCCCTG............2211.00100010000000000000
.........TGTCCCTCTCGTTGCTCCTGC......................................................................................................................................................................................2111.00100001000000000000
..............................................................................................................................................................................TTAAGTCGGCTCGCATCACTC.................2111.00100000000000001000
..........................................................................................................................................................................CTTGTTAAGTCGGCTCGCATC.....................2111.00100000000000001000
......ACATGTCCCTCTCGTTGCTCC.........................................................................................................................................................................................2111.00100000000000001000
..............................GTGGCGCTGTCCGTTGCA....................................................................................................................................................................1811.00100000000001000000
..............................GTGGCGCTGTCCGTTGCAA...................................................................................................................................................................1911.00100000000001000000
...................................................................................................................................................................CGCAAATCTTGTTAAGTCGGCC...........................2211.00100100000000000000
........................................................................................................................................................................................TCGCATCACTCCCCTGAAGAGCTAC...2511.00100000000001000000
droSec2
CC--CAACATGTCCCTCTCGTTGCTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGACCCA-CTGGATGGCCAATC-GCCTTATTA--TT------GGCCGCAAAACCGCTTTC--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CC-CAATTAGCCGCTAATCTTGTTAAGTCGGCTCGTATCACTCCCCTGAAGAGCTACTCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................GTATCACTCCCCTGAAGAG.......1912.0020020
......................................................................................................................................................................................GCTCGTATCACTCCCCTGAAGAG.......2312.0020101
..................................................................................................................................................................................GTCGGCTCGTATCACTCCA...............1911.0011000
.............................................................................................................................................................................GTTAAGTCGGCTCGTATCACT..................2111.0011000
............................GCGTGGCGCTGTCCGTTGCAATGCC...............................................................................................................................................................2511.0010010
...................................................................................................................................................................................TCGGCTCGTATCACTCCCCT.............2011.0011000
................................................................................................................................................................................AAGTCGGCTCGTATCACTCCCC..............2211.0010100
..........GTCCCTCTCGTTGCTCCTGCG.....................................................................................................................................................................................2111.0011000
..........GTCCCTCTCGTTGCTCCTGCGTGG..................................................................................................................................................................................2411.0011000
.....................................................................................................................................................................CTAATCTTGTTAAGTCGGC............................1911.0010010
.......................................................................................................................................................................AATCTTGTTAAGTCGGCTCGTAC......................2311.0010100
.......................CTCCTGCGTGGCGCTGTCCGT........................................................................................................................................................................2111.0010010
......................................................................................................................................................................................GCTCGTATCACTCCCCTGAA..........2011.0011000
..............................................................................................................................................................................TTAAGTCGGCTCGTATCACTCCC...............2311.0011000
........ATGTCCCTCTCGTTGCTCCTGC......................................................................................................................................................................................2211.0010010
......ACATGTCCCTCTCGTTGCTCCTGCGT....................................................................................................................................................................................2611.0010100
................................................................................................................................................................................AAGTCGGCTCGTATCACTCC................2011.0011000
.............................................................................................................................................................................................TCACTCCCCTGAAGAGCTAC...2011.0011000
....................................................................................................................................................................................CGGCTCGTATCACTCCCCTGAAGAGC......2611.0010010
.......................CTCCTGCGTGGCGCTGTCCG.........................................................................................................................................................................2011.0011000
..........GTCCCTCTCGTTGCTCCTGCGTGGC.................................................................................................................................................................................2511.0010010
........................................................................................................................................................................................TCGTATCACTCCCCTGAAGA........2011.0010010
........................................................................................................................................................................................TCGTATCACTCCCCTGAAGAGCT.....2311.0010010
..................CGTTGCTCCTGCGTGGCGCT..............................................................................................................................................................................2011.0010010
droYak3
CC--CAACATGACCCTCTCGTTGCTCTTGCGTAGCGCTGTCCGTTGCAATGGTAAGGATCCA-CTGGATGGCCAATG-GCTTTACTA--TT------GTCCGCAAAACAGCTTTC--ATTATATAACCAAA--C---CGTTTGTTGGTAT--CC-CAATTAGCCGCAAATCTTGTTAAGTCGGCTCGCATCACGCCCCTGAAGAGCTACTCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................GCAAATCTTGTTAAGTCGGCT...........................2111.00100100000000
...............................................................................................................................................................................TAAGTCGGCTCGCATCACGC.................2011.00100000010000
...................................................................................................................................................................CGCAAATCTTGTTAAGTCGGCT...........................2211.00110000000000
.............................................................................................................................................................................GTTAAGTCGGCTCGCATCAC...................2011.00101000000000
..........................................................................................................................................................................CTTGTTAAGTCGGCTCGCA.......................1911.00101000000000
.........................CTTGCGTAGCGCTGTCCGTT.......................................................................................................................................................................2011.00100000010000
.......................CTCTTGCGTAGCGCTGTCCGTTGCA....................................................................................................................................................................2511.00100000010000
.....................................................................................................................................................................CAAATCTTGTTAAGTCGGCTCGCAT......................2511.00101000000000
.......................................................................................................................................................................AATCTTGTTAAGTCGGCTC..........................1911.00110000000000
........................................................................................................................................................................ATCTTGTTAAGTCGGCTCGC........................2011.00101000000000
......................................................................................................................................................................AAATCTTGTTAAGTCGGCTCGC........................2211.00100000010000
......................................................................................................................................................................................GCTCGCATCACGCCCCTGAAGA........2211.00100000010000
.....................TGCTCTTGCGTAGCGCTGTCCGT........................................................................................................................................................................2311.00101000000000
........................................................................................................................................................................ATCTTGTTAAGTCGGCTCGCA.......................2111.00100000010000
...................GTTGCTCTTGCGTAGCGCT..............................................................................................................................................................................1911.00101000000000
........................................................................................................................................................................ATCTTGTTAAGTCGGCTCGCATCA....................2411.00100000010000
..........................................................................................................................................................................CTTGTTAAGTCGGCTCGCATCAC...................2311.00100000010000
.........................................................................................................................................................................................CGCATCACGCCCCTGAAGAG.......2011.00101000000000
..........GACCCTCTCGTTGCTCTTGCGTAGCGCT..............................................................................................................................................................................2811.00100000010000
.......................................................................................................................................................................AATCTTGTTAAGTCGGCTCGCATC.....................2411.00100000010000
......................................................................................................................................................................................GCTCGCATCACGCCCCTGAAG.........2111.00101000000000
..........................TTGCGTAGCGCTGTCCGTTGCA....................................................................................................................................................................2211.00101000000000
...........................TGCGTAGCGCTGTCCGTTGCA....................................................................................................................................................................2111.00100001000000
.............................................................................................................................................................................GTTAAGTCGGCTCGCATCA....................1911.00100000010000
droEre2
TCC-CAACATGTCCCTCTCGTTGCTCCTGCGTGGCGCTGTCCGTTGCAATGGTAAGGGCCCA-CTGGATGGCCAATT-GCCTCACTA--TT------GGCCGCAAAACAACATTC--ATTATATAACCAAA--C---CGTTTGTTGGAAT--CC-CAATTAGCCGCAAATCTTGTTAAGTCGGCGCGCATCACGCCCCTCAAGAGCTACTCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................TCGGCGCGCATCACGCCCCTCAAGAGC......2717.0070000007
...................................................................................................................................................................CGCAAATCTTGTTAAGTCGGC............................2113.0031001100
..............................GTGGCGCTGTCCGTTGCA....................................................................................................................................................................1812.0021000010
....................................................................................................................................................................GCAAATCTTGTTAAGTCGGC............................2012.0020000020
..............................GTGGCGCTGTCCGTTGCAATGC................................................................................................................................................................2212.0020101000
.......................................................................................................................................................................AATCTTGTTAAGTCGGCGC..........................1911.0010000010
......................................................................................................................................................................AAATCTTGTTAAGTCGGCGCGC........................2211.0010100000
...................................................................................................................................................................................TCGGCGCGCATCACGCCCCTCA...........2211.0011000000
....................................................................................................................................................................GCAAATCTTGTTAAGTCGGCG...........................2111.0010000010
TCC-CAACATGTCCCTCTCGTTGCTCC.........................................................................................................................................................................................2611.0011000000
......................................................................................................................................................................................GCGCGCATCACGCCCCTCAAG.........2111.0011000000
...........................................................................................................................................................................TTGTTAAGTCGGCGCGCATCACGCC................2511.0011000000
.........................................................................................................................................................................................CGCATCACGCCCCTCAAGAGC......2111.0010001000
...........................................................................................................................................................................TTGTTAAGTCGGCGCGCATCACGCCCCT.............2811.0011000000
.......CATGTCCCTCTCGTTGCTCCTGCGTGG..................................................................................................................................................................................2711.0010000010
................................................................................................................................................................................AAGTCGGCGCGCATCACGCCCC..............2211.0011000000
.......................CTCCTGCGTGGCGCTGTCCG.........................................................................................................................................................................2011.0010000010
...................GTTGCTCCTGCGTGGCGCTGTCC..........................................................................................................................................................................2311.0011000000
.....................TGCTCCTGCGTGGCGCTGTCCGTT.......................................................................................................................................................................2411.0010001000
.......................CTCCTGCGTGGCGCTGTCCGTTGG.....................................................................................................................................................................2411.0011000000
...............TCTCGTTGCTCCTGCGTGGCGCTG.............................................................................................................................................................................2411.0011000000
..........GTCCCTCTCGTTGCTCCTGCGTGG..................................................................................................................................................................................2411.0011000000
....CAACATGTCCCTCTCGTTGCTCC.........................................................................................................................................................................................2311.0011000000
...........TCCCTCTCGTTGCTCCTGCGTG...................................................................................................................................................................................2211.0011000000
................CTCGTTGCTCCTGCGTGGCGC...............................................................................................................................................................................2111.0010001000
...............TCTCGTTGCTCCTGCGTGGCGCT..............................................................................................................................................................................2311.0011000000
...........................TGCGTGGCGCTGTCCGTTGCAAT..................................................................................................................................................................2311.0011000000
.............................................................................................................................................................................GTTAAGTCGGCGCGCATCACG..................2111.0010100000
...........................TGCGTGGCGCTGTCCGTTGCA....................................................................................................................................................................2111.0011000000
....CAACATGTCCCTCTCGTTGCT...........................................................................................................................................................................................2111.0011000000
..................CGTTGCTCCTGCGTGGCGCTGTCCGT........................................................................................................................................................................2611.0011000000
.....................TGCTCCTGCGTGGCGCTGTCCGT........................................................................................................................................................................2311.0011000000

Generated: 05/19/2015 at 08:27 PM