ID:

dvi_1729

 Coordinate:

scaffold_12723:4991101-4991251 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.3 -27.9 -27.7

Flybase annnotation

CDS [Dvir\GJ17875-cds]; exon [dvir_GLEANR_2449:3]; intron [Dvir\GJ17875-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAACTAACGGAGGCGCAGATACAAAGTTATGTGGACAGCGGTGACCCACTGTAAGTGCCGCAACAAACACTCAAACTGCCCTTTAGTAGGGGGTGTATTAAGGGTATTTTTAAGAGTATCTTATAGTCTTCCAAAGCTGCTAAAAAAAACCCTTAAACGTTTAACGAGAGCTCATATATTTCAATATTCGAGTGTCTAGATATTGATATTAGATATCTGATATTGACGGATTCGTACAGATGCACAGACAG
**************************************************................((((((...((((......)))).)))))).((((((((.(((((...((((.(((...........))).)))).))))).)))))))).(((...)))(((((((..((((....))))..)))).)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060654
160x9_ovaries_total
 SRR060673
9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060688
160_ovaries_total
 SRR060655
9x160_testes_total
 SRR1106729
mixed whole adult body
 SRR060679
140x9_testes_total
 M061
embryo
 SRR1106722
embryo_10-12h
 SRR060666
160_males_carcasses_total
 V047
embryo
............................................................................................................................................................................................................................TATTGACGGATTCGTACAGATGCAC...... 25 0 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CAATATTCGAGTGTCTAAATATTGATA........................................... 27 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TAAACGTTTAACGAGAGCTCATATATT....................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TACAAAGTTATGTGGACAGCGGT................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....AACGGAGGCGCAGATACA.................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGATATTGACGGATTCGTACAGCT.......... 24 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.AACTAACGGAGGCGCAGATACA.................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGATATTGACGGATTCGTACAGATGC........ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGATATTGACGGATTCGTACAGA........... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ATCTGATATTGACGGATTCGT................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TTCCGAAGCTGCTAAAAAG........................................................................................................ 19 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TTAGTAGGAGGTGTATTAG...................................................................................................................................................... 19 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.AAGTAACGGAGGCGC........................................................................................................................................................................................................................................... 15 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................GTTTTCCAAAGCTGGTAAA........................................................................................................... 19 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................AAGGGTACTGGTAAGAGTA..................................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0
...................................................TAAGTCCCGCAACGAACGC..................................................................................................................................................................................... 19 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................GACAAACACTCAAACCCCCC.......................................................................................................................................................................... 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................TGTATTAAGGGGATT............................................................................................................................................... 15 1 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................TGTGGATAGGGGTGACTC............................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
................................CGACAAAGGTGACCCACT......................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
AAAGTAACGGAGGCGC........................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.AAGTAACGGAGGCGCC.......................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

GTTGATTGCCTCCGCGTCTATGTTTCAATACACCTGTCGCCACTGGGTGACATTCACGGCGTTGTTTGTGAGTTTGACGGGAAATCATCCCCCACATAATTCCCATAAAAATTCTCATAGAATATCAGAAGGTTTCGACGATTTTTTTTGGGAATTTGCAAATTGCTCTCGAGTATATAAAGTTATAAGCTCACAGATCTATAACTATAATCTATAGACTATAACTGCCTAAGCATGTCTACGTGTCTGTC
**************************************************................((((((...((((......)))).)))))).((((((((.(((((...((((.(((...........))).)))).))))).)))))))).(((...)))(((((((..((((....))))..)))).)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 SRR060687
9_0-2h_embryos_total
 SRR1106728
larvae
 SRR060660
Argentina_ovaries_total
 M027
male body
.........................................................................................................................................................ATTTGCAAATTGCTATCGAGT............................................................................. 21 1 1 1.00 1 1 0 0 0 0
..............................CACATGCCGCCACTGGATGA......................................................................................................................................................................................................... 20 3 3 0.33 1 0 1 0 0 0
.....................................................................................................................................................................................................................ATAGTCTATAACTGC....................... 15 1 9 0.11 1 0 0 1 0 0
.............................................................................................................................CAGAAGGTTTCGACGACG............................................................................................................ 18 2 12 0.08 1 0 0 0 1 0
................................................................TTTGTGAGTCTAAGGGGAA........................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12723:4991051-4991301 - dvi_1729 CAACTAACGGAGGCGCAGATACAAAGTTATGTGGACAGCGGTGACCCACTGTAAGTGCCGCAACAAACACTCAAACTGCCCTTTAGTAGGGGGTGTATTAAGG----------------------------------------------------------------------GTATTTTTAAGAGTATCTTATAGTCTTCCAAAGCT---------------------------GCTAAAAAAAACCCTTA-----AAC-G------T-------------------------------TTAACG-----AGAGCTCATATATTTCAATATTCGAGT---------------------------------------------GTCTAGATA------TTGATAT--TAGATATCTGATATTGACGGATT--------------------------------------------------------------------CGTACA----GATGCACAGACAG
droMoj3 scaffold_6500:13601517-13601708 - CGCTT-------------------------------------------------------------------GGGCTGCGCTGCAGTGTGGGCAATATTATGA------------GAATTTATTT------------------GTTTAATAGTTTCTTTT-----GTATTATC--------GAAA----------AACTA---AGAT--------------AAACTTGTACTGCGTATACACA-------------------------G------------------------------GTACACA-----GG--ATTATGCATGTCAAATTTCAGCT----------------------------------------------------------CTCTAGCTCTTATAACTTCTGAGATCGACGCACT--------------------------------------------------------------------CATACG----GAGGGACGGACAG
droGri2 scaffold_14906:8184937-8185057 - GTATT-------------------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------------ATTGCTATCGAAAAATGATTAAATGAAATAAACTTA----------------------------------------A-------------------------------TCTACG-----AAAACT--TATATTCTAAATTTGAAGT----------------------------------------------------------AGCTAGCTT---TAGCTTATGAGATCTGCATGTT--------------------------------------------------------------------CATTCA----GAC----GGACAA
droWil2 scf2_1100000004961:2030076-2030219 - TTTTT-------------------------------------------------------------------AA---------------------------GA------------AAATCTGTTT----------------------------------------------------------------TTTGTAAATTCCGGAAAC------------------------------------AAAC-----TCGATAACTGTACATAA-------------------------------TACACG-----AG--AC--TGCATACCAAATTTGGTGG----------------------------------------------------------CTCTAGCTCTTATAGTCTCCGAGATCTAGGTGTTCA-------------------TACGG---------------------------------------------ATG----GACGGACGGACAG
dp5 XL_group1e:2268960-2269045 - TATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAG----------------------------------------------------ATTTTGGGAC----TTCTAGCTCTTATAGTCTTTGAGCACTAGACGCTGA-------------------TAGGGACG-----------------------------GA--------CAGACG----GACGGACGGACAG
droPer2 scaffold_1:713379-713431 + TAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAGCACTAGGCACTGA-------------------TAGGGACG-----------------------------GA--------CGGACA----GACGGACAGACAG
droAna3 scaffold_12916:10608101-10608156 - GAGCTGTTACCAGAACAAATCAAGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACGTAGATTCAAAGGATCCCCTGTA--------------------------------------------------------------------AGT--------------------
droBip1 scf7180000395763:6057-6183 - GGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------------------------------------------TTTTATCTCTTATAGTCTTCGAGATCCAAACGTTCAAAATTTTAACACGTTTGTATGGGAATGGGAATATACATTAGAGGTCTGCATAGATACACTCTTATGCATGCG----TTCATACCGACAG
droKik1 scf7180000302700:34466-34632 - TGTTT-------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------AAAAATGTATCATACATTTGTATAGCA---------------------------GCTATATAATATAGTCG-----TCC-G------ATCCGGCCCGTTCCGACATATATAGCAGTGAGTATATA-----GAAGAC--TATATGCAAAGTTTTATTT----------------------------------------------------------AGATAGCTT---TAAAACTAAAGGAC-TAGTTTA--------------------------------------------------------------------CGTAGA----AACGGACATACAG
droFic1 scf7180000454102:71288-71342 + GAACTGCTGCCAGAGCAAATTCAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGT----------------------------GGACTCAGGCGAT--------------------------------------------------------------------C-------------CCCTGTAAG
droEle1 scf7180000486423:239-310 - TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTCAAATCCCAAAT----------------------------------------------------------CTCTAGTTTTTATAGTTTATAAGATCTTGACGTT--------------------------------------------------------------------CATACG----GACGAACAGATAG
droRho1 scf7180000778245:9311-9455 + TTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATTTCTTCTACATTTCGATAG-------------------------------------GTAT-----TGATAA-----ACACAA-------------------------------TAAA-----------AC--TGCATTTTTACTTT-----TCCGAAAT-------------------------------------ATTTAAATT----------TTTATATAGTTTCCGAGATCTCAGCGTTCA-------------------TACGGACA-----------------------------GA--------CAGACGGACAGACAGACGGACAG
droBia1 scf7180000302455:10829-11015 - TACCA-------------------------------------------------------------------A----------------------------GAGACTTCTTAAGAATACGGAACTCCTGTAATGTTTCGGATAAATTAGCTGACCCTTTTAAGACGCTCAAAC--------GGTA----------GTCAA---AAAT--------------AAATTTCTATT------------------------------------------------------------------------TCTGGATGACATC--TGCATGCCAAGTATGGATA----------------------------------------------------------TTCTAGCTCTTTTAGTTTCCGAGATTTCAGCGTT--------------------------------------------------------------------CATACG----GACGAACGGACAG
droTak1 scf7180000414030:766-896 + TTGAC-------------------------------------------------------------------------------------------------A----------------------------------------------------------------------GTATTTTAAAAAGTATCTTAA------------------------------------------------------------------------------------------------------------------------------------TCAGTTT-----CCCGAGCTTTTTAACAAGGGATGAAGTCGTTGATAAAATTCGAGTCCCTGGG----------AGACCCTGTAGTTTCTGAGATCTCAGCGTT--------------------------------------------------------------------CATACA----GAC----GGACAG
droEug1 scf7180000409029:4029-4157 - CTATA-------------------------------------------------------------------A----------------------------GATAC-----------------------------------------------------------------------------------CCGTTACTGTTTT---AC------------------------------------AGAA-----TTTTAAAATATACATTT-------------------------------TGTTAG-----TG--GA--ATCATGCTTAATCTCAACT----------------------------------------------------------TTGTATCTGCTATAGTTCCTGAGATCTCAGCGTT--------------------------------------------------------------------CATACG----GACGGACGGACAG
dm3 chrX:21888185-21888250 - ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTGAACA----------------------------------------------------------TTCTAGCCTGTATAGTTTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GACGTAATGACAG
droSim2 x:13898628-13898691 + GAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAATCTCAACA----------------------------------------------------------TT-------CTAGATGTCCTGAGATCTTGACATT--------------------------------------------------------------------TGTACG----GACGGACAGACAG
droSec2 scaffold_30:530675-530762 - AGCTT-------------------------------------------------------------------ATACAGTTCCTGAGTCCGAGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATCT--AAC----------------------------------------------------------TTCTAGCTT--TAAGTTGCCAAGATCTAAAGGTT--------------------------------------------------------------------CATACG----GACGGAAAGACAG
droYak3 X:17626-17780 - AAGGG---------------------------------------------------------------------------------------GTGTGGCCAAA----------------------------------------------------------------------GTGT------------TCTGGGTATTCCTAT-AG------------------------------------AAAT-----TGGCAAAACAAACAATA-------------------------------CAAC---------GAAC--AAAAATCAAAATATTTTTC----AAAC-------------------------------------GTATAAGCGTTAGAGTGGGCTTTTGTAGTTTCTAAGATCTCGGCTTT--------------------------------------------------------------------CATACG----AACGGACAGACAG
droEre2 scaffold_4690:17886714-17886851 + AGTGG---------------------------------------------------------------------------------------GCGTGGCAAAA----------------------------------------------------------------------AGTTTTTTGGCA----------AACTT---ATAT------------------------------------AAAT-----TTACAAAATATATAAAA-------------------------------AAAACA-----AG--CTTGCTCATGCTTAATTTCAACA----------------------------------------------------------TTCTAGCTTTTTTTTTTCCTAAGATCGAGGCGTT--------------------------------------------------------------------CATACG----GAC----GGACAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CAACTAACGGAGGCGCAGATACAAAGTTATGTGGACAGCGGTGACCCACTGTAAGTGCCGCAACAAACACTCAAACTGCCCTTTAGTAGGGGGTGTATTAAGG----------------------------------------------------------------------GTATTTTTAAGAGTATCTTATAGTCTTCCAAAGCT---------------------------GCTAAAAAAAACCCTTA-----AAC-G------T-------------------------------TTAACG-----AGAGCTCATATATTTCAATATTCGAGT---------------------------------------------GTCTAGATA------TTGATAT--TAGATATCTGATATTGACGGATT--------------------------------------------------------------------CGTACA----GATGCACAGACAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGACGGATT--------------------------------------------------------------------CGTACA----GATGCAC......2512.002000010000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TA-----AAC-G------T-------------------------------TTAACG-----AGAGCTCATATATT....................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...................TACAAAGTTATGTGGACAGCGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
.....AACGGAGGCGCAGATACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.AACTAACGGAGGCGCAGATACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGATATTGACGGATT--------------------------------------------------------------------CGTACA----GATGC........2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGATATTGACGGATT--------------------------------------------------------------------CGTACA----GA...........2311.001000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGATATTGACGGATT--------------------------------------------------------------------CGT....................2111.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
CGCTT-------------------------------------------------------------------GGGCTGCGCTGCAGTGTGGGCAATATTATGA------------GAATTTATTT------------------GTTTAATAGTTTCTTTT-----GTATTATC--------GAAA----------AACTA---AGAT--------------AAACTTGTACTGCGTATACACA-------------------------G------------------------------GTACACA-----GG--ATTATGCATGTCAAATTTCAGCT----------------------------------------------------------CTCTAGCTCTTATAACTTCTGAGATCGACGCACT--------------------------------------------------------------------CATACG----GAGGGACGGACAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...TT-------------------------------------------------------------------GGGCTGCGCTGCAGTGTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.306600000
droGri2
GTATT-------------------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------------ATTGCTATCGAAAAATGATTAAATGAAATAAACTTA----------------------------------------A-------------------------------TCTACG-----AAAACT--TATATTCTAAATTTGAAGT----------------------------------------------------------AGCTAGCTT---TAGCTTATGAGATCTGCATGTT--------------------------------------------------------------------CATTCA----GAC----GGACAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TTTTT-------------------------------------------------------------------AA---------------------------GA------------AAATCTGTTT----------------------------------------------------------------TTTGTAAATTCCGGAAAC------------------------------------AAAC-----TCGATAACTGTACATAA-------------------------------TACACG-----AG--AC--TGCATACCAAATTTGGTGG----------------------------------------------------------CTCTAGCTCTTATAGTCTCCGAGATCTAGGTGTTCA-------------------TACGG---------------------------------------------ATG----GACGGACGGACAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................TAACTGTACATAA-------------------------------TACACG-----AG--AC--TGCA......................................................................................................................................................................................................2730.33100010
..................................................................................................................................................................................................................................................................................................................................ATACCAAATTTGGTGG----------------------------------------------------------CTCTAGCTC....................................................................................................................25200.10202000
........................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCTCCGAGATCTAGGTGT............................................................................................21200.05100001
dp5
TATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAG----------------------------------------------------ATTTTGGGAC----TTCTAGCTCTTATAGTCTTTGAGCACTAGACGCTGA-------------------TAGGGACG-----------------------------GA--------CAGACG----GACGGACGGACAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGGACG-----------------------------GA--------CAGACG----GACGGAC......23201.653300000000330
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGTCTTTGAGCACTAGACG.............................................................................................2371.2990600000210
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGGACG-----------------------------GA--------CAGACG----GACGGA.......22201.252500000000250
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGTCTTTGAGCACTAGACGC............................................................................................2471.1480200000150
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGACGCTGA-------------------TAGGGACG-----------------------------G................................2121.0020000000020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGA-------------------TAGGGACG-----------------------------GA--------CAGACG----GACGG........24200.851700000001700
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGGACG-----------------------------GA--------CAGACG----GACG.........20200.3060000000600
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGGACG-----------------------------GA--------CAGACG----G............17200.2550000000500
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGA-------------------TAGGGACG-----------------------------GA--------CAGACG----GACGT........24200.1530100000200
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------TAGGGACG-----------------------------GA--------CAGACG----GACGGAC......24200.1530000000300
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGTCTTTGAGCACTAGA...............................................................................................2170.1410000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTTTGAGCACTAGACGCT...........................................................................................2180.1310100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGA-------------------TAGGGACG-----------------------------GA--------CAGACG----G............22200.1020000000020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------CAGACG----GACGGACGGACA.20200.1020000002000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGA-------------------TAGGGACG-----------------------------GA--------CAGACG----GACG.........23200.1020000000020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------CAGACG----GACGGACGGACAG21200.0510000000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGACG-----------------------------GA--------CAGACG----GA...........17200.0510000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................TAGCTCTTATAGTCTTTGAG......................................................................................................20200.0510000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACGCTGA-------------------TAGGGACG-----------------------------GA--------CAGACA----.............26200.0510000000100
..................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTATAGTCTTTGAGCACT..................................................................................................21200.0510000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGA-------------------TAGGGACG-----------------------------GA--------CAGACG----G............23200.0510000000001
droPer2
TAGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAGCACTAGGCACTGA-------------------TAGGGACG-----------------------------GA--------CGGACA----GACGGACAGACAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCACTAGGCACTGA-------------------TAGG..................................................................2260.171010000
droAna3
GAGCTGTTACCAGAACAAATCAAGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACGTAGATTCAAAGGATCCCCTGTA--------------------------------------------------------------------AGT--------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................CAAGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACGTAGATTCAAAGGA....................................................................................................2411.001010000
droBip1
GGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------------------------------------------TTTTATCTCTTATAGTCTTCGAGATCCAAACGTTCAAAATTTTAACACGTTTGTATGGGAATGGGAATATACATTAGAGGTCTGCATAGATACACTCTTATGCATGCG----TTCATACCGACAGSizeHit CountTotal NormTotal
No Reads
droKik1
TGTTT-------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------AAAAATGTATCATACATTTGTATAGCA---------------------------GCTATATAATATAGTCG-----TCC-G------ATCCGGCCCGTTCCGACATATATAGCAGTGAGTATATA-----GAAGAC--TATATGCAAAGTTTTATTT----------------------------------------------------------AGATAGCTT---TAAAACTAAAGGAC-TAGTTTA--------------------------------------------------------------------CGTAGA----AACGGACATACAGSizeHit CountTotal NormTotal
No Reads
droFic1
GAACTGCTGCCAGAGCAAATTCAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGT----------------------------GGACTCAGGCGAT--------------------------------------------------------------------C-------------CCCTGTAAGSizeHit CountTotal NormTotal
No Reads
droEle1
TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTCAAATCCCAAAT----------------------------------------------------------CTCTAGTTTTTATAGTTTATAAGATCTTGACGTT--------------------------------------------------------------------CATACG----GACGAACAGATAGSizeHit CountTotal NormTotal
No Reads
droRho1
TTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATTTCTTCTACATTTCGATAG-------------------------------------GTAT-----TGATAA-----ACACAA-------------------------------TAAA-----------AC--TGCATTTTTACTTT-----TCCGAAAT-------------------------------------ATTTAAATT----------TTTATATAGTTTCCGAGATCTCAGCGTTCA-------------------TACGGACA-----------------------------GA--------CAGACGGACAGACAGACGGACAGSizeHit CountTotal NormTotal
No Reads
droBia1
TACCA-------------------------------------------------------------------A----------------------------GAGACTTCTTAAGAATACGGAACTCCTGTAATGTTTCGGATAAATTAGCTGACCCTTTTAAGACGCTCAAAC--------GGTA----------GTCAA---AAAT--------------AAATTTCTATT------------------------------------------------------------------------TCTGGATGACATC--TGCATGCCAAGTATGGATA----------------------------------------------------------TTCTAGCTCTTTTAGTTTCCGAGATTTCAGCGTT--------------------------------------------------------------------CATACG----GACGAACGGACAGSizeHit CountTotal NormTotal
No Reads
droTak1
TTGAC-------------------------------------------------------------------------------------------------A----------------------------------------------------------------------GTATTTTAAAAAGTATCTTAA------------------------------------------------------------------------------------------------------------------------------------TCAGTTT-----CCCGAGCTTTTTAACAAGGGATGAAGTCGTTGATAAAATTCGAGTCCCTGGG----------AGACCCTGTAGTTTCTGAGATCTCAGCGTT--------------------------------------------------------------------CATACA----GAC----GGACAGSizeHit CountTotal NormTotal
No Reads
droEug1
CTATA-------------------------------------------------------------------A----------------------------GATAC-----------------------------------------------------------------------------------CCGTTACTGTTTT---AC------------------------------------AGAA-----TTTTAAAATATACATTT-------------------------------TGTTAG-----TG--GA--ATCATGCTTAATCTCAACT----------------------------------------------------------TTGTATCTGCTATAGTTCCTGAGATCTCAGCGTT--------------------------------------------------------------------CATACG----GACGGACGGACAGSizeHit CountTotal NormTotal
No Reads
dm3
ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTGAACA----------------------------------------------------------TTCTAGCCTGTATAGTTTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GACGTAATGACAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GA...........26112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000012000000000000000000000000000000000000000000000000000100100000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GACG.........25111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000104000000020200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GAC..........2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTATAGTTTCTGAGATCCTGACGT............................................................................................2514.0040000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----.............2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GAC..........2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GA...........2714.0040000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTATAGTTTCTGAGATCCTGACGTT--------------------------------------------------------------------.......................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CA----------------------------------------------------------TTCTAGCCTGTATAGTTTCTGAGA.....................................................................................................2613.0030000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----.............2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----G............2513.0030000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CTGTATAGTTTCTGAGATCCTGACG.............................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GACG.........2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGCCTGTATAGTTTCTGAGATCC..................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CTGTATAGTTTCTGAGATCCTGACGT............................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCCTGACGTT--------------------------------------------------------------------CATACG----G............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGCCTGTATAGTTTCTGAGATCC..................................................................................................2612.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GAC..........2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GA...........2512.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TATAGTTTCTGAGATCCTGACGTT--------------------------------------------------------------------.......................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GACG.........2812.0020000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GACGT........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GA...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGCCTGTATAGTTTCTGAGATCCT.................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTATAGTTTCTGAGATCCTGACG.............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTATAGTTTCTGAGATCCTGACG.............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGTT--------------------------------------------------------------------CATACG----GACGTAATGACA.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CTGTATAGTTTCTGAGATCCTGACGTT--------------------------------------------------------------------.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TATAGTTTCTGAGATCCTGAC..............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GA...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TATAGTTTCTGAGATCCTGACGT............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAGCCTGTATAGTTTCTGAGATCCTGACGT............................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GAC..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGTT--------------------------------------------------------------------CATACG----GACGTAATGAC..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----G............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGCCTGTATAGTTTC..........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCCTGACGTT--------------------------------------------------------------------CATAC..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGCCTGTATAGTTTCTGAGATC...................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGACGTT--------------------------------------------------------------------CATACG----GACGTAATGAC..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CTAGCCTGTATAGTTTCTGAGA.....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGCCTGTATAGTTTCTGAGAT....................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTATAGTTTCTGAGATCCTGACGTT--------------------------------------------------------------------C......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AACA----------------------------------------------------------TTCTAGCCTGTATAGTTTCTGA.......................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GACGT........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GAA..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GAA..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGCCTGTATAGTTTCTGAGATCCT.................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GACGTAAT.....2911.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GACA.........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TATAGTTTCTGAGATCCTGACG.............................................................................................2211.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGATCCTGACGTT--------------------------------------------------------------------CATACG----GACG.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTTCTGAGATCCTGACGTT--------------------------------------------------------------------CAT....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAGCCTGTATAGTTTCTGAGATCCT.................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTATAGTTTCTGAGATC...................................................................................................1820.5010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGACGTT--------------------------------------------------------------------CATACG----GAC..........2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTGAACA----------------------------------------------------------TTCCC........................................................................................................................18110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAATCTCAACA----------------------------------------------------------TT-------CTAGATGTCCTGAGATCTTGACATT--------------------------------------------------------------------TGTACG----GACGGACAGACAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AGCTT-------------------------------------------------------------------ATACAGTTCCTGAGTCCGAGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATCT--AAC----------------------------------------------------------TTCTAGCTT--TAAGTTGCCAAGATCTAAAGGTT--------------------------------------------------------------------CATACG----GACGGAAAGACAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AAGGG---------------------------------------------------------------------------------------GTGTGGCCAAA----------------------------------------------------------------------GTGT------------TCTGGGTATTCCTAT-AG------------------------------------AAAT-----TGGCAAAACAAACAATA-------------------------------CAAC---------GAAC--AAAAATCAAAATATTTTTC----AAAC-------------------------------------GTATAAGCGTTAGAGTGGGCTTTTGTAGTTTCTAAGATCTCGGCTTT--------------------------------------------------------------------CATACG----AACGGACAGACAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AGTGG---------------------------------------------------------------------------------------GCGTGGCAAAA----------------------------------------------------------------------AGTTTTTTGGCA----------AACTT---ATAT------------------------------------AAAT-----TTACAAAATATATAAAA-------------------------------AAAACA-----AG--CTTGCTCATGCTTAATTTCAACA----------------------------------------------------------TTCTAGCTTTTTTTTTTCCTAAGATCGAGGCGTT--------------------------------------------------------------------CATACG----GAC----GGACAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/16/2015 at 09:07 PM