ID:

dvi_17276

 Coordinate:

scaffold_13047:16807072-16807368 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_9841:1]; CDS [Dvir\GJ24572-cds]; exon [dvir_GLEANR_9841:2]; CDS [Dvir\GJ24572-cds]; intron [Dvir\GJ24572-in]

No Repeatable elements found

Sense Strand Reads

-------###########################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTCAGAAATGCGAGCCCAGAACGGCAAACTTTGGTCAACTTTGCACGAAGGTGCGTGTAGTTAATGTGTTTTCAAAATAAGCCTGTGTTTATATAATATTTTCAATAGCTTGCTGCATATCTAATTGTCAAACGTCGTTAGTTCCATTAACATTCATACTATATGTAGGACTTCTGTTAAGTTTGTCGGTAGAAAGTAGATATTAAATTAGATATCTAAAAATATAATTGTTTAACGCACATTAAAGCTTTTTGTTATGCTTTAAATACATAAAAATATGTAAAATAGTAATAATGAATCCTAACTTTTTTTAAAATTTTTTGTTTTTTGCGAACGTGTCACAACAGGCAAGTATGAAGTCTGCAGTCTGGCTAGGGAGGATTTGGAGGAAGCCCTT
**************************************************(((((.(((((((.((..........((((((....))))))..........)).)))).))))))))......((((...((((.((((((...)))))).......((((.((..((((((.....))))))..))))))....((((((((......)))))))).(((((....)))))..((((..(((((((..........))))))).((((((....)))))).......(((((.((((..(((......)))..)))).)))))...)))).))))...))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060656
9x160_ovaries_total
 SRR060677
Argx9_ovaries_total
 M047
female body
 SRR060672
9x160_females_carcasses_total
 M061
embryo
 SRR060658
140_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060668
160x9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 M027
male body		 SRR1106714
embryo_2-4h
 V047
embryo
............................................................................................................................TTGTCAAAGGTCGTAAGTTCG............................................................................................................................................................................................................................................................ 21 3 2 3.50 7 0 1 3 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................AAAGGTCGTTAGTTCAATT......................................................................................................................................................................................................................................................... 19 2 6 2.50 15 9 0 0 2 1 0 0 0 0 0 1 1 1 0 0 0 0 0
............................................................................................................................TTGTCAAAGGTCGTAAGTTC............................................................................................................................................................................................................................................................. 20 2 1 2.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................CAGTCTGGCTAGGGAGGATTTGGAGG........ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................................AGGGAGGATTTGGAGGAAGC.... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....GAAATGCGAGCCCAGAACGGCAAA................................................................................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................................................TAGAGAAGAGTTGGAGGAAGCC... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GCAAAGGTCGTTAGTTCAATT......................................................................................................................................................................................................................................................... 21 3 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CAAAGGTCGTTAGTTCAATT......................................................................................................................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CGATCGTGTCTCAACAGGCC............................................... 20 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................AAAGGTCGTTAGTTCAAT.......................................................................................................................................................................................................................................................... 18 2 20 0.25 5 1 0 0 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0
................................................................................................................................CAAAGGTCGTTAGTTCAATTC........................................................................................................................................................................................................................................................ 21 3 20 0.25 5 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CAAAGGTCGTTAGTTCATTT......................................................................................................................................................................................................................................................... 20 3 9 0.22 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................AATAGATAAAAATATGTACAGTA.............................................................................................................. 23 3 10 0.20 2 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................CAAGTTCGAAGTCTGCAG............................... 18 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................AAGGTCGTTAGTTCAATT......................................................................................................................................................................................................................................................... 18 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................CAAAGGTCGTTAGTTCAAT.......................................................................................................................................................................................................................................................... 19 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TCAAAGGTCGTTAGTTCAATTC........................................................................................................................................................................................................................................................ 22 3 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GCAAAGGTCGTTAGTTCAAT.......................................................................................................................................................................................................................................................... 20 3 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................ATAGATAAAAATATGTACAGTA.............................................................................................................. 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................AGGGGCGTGTAGTGAATGC.......................................................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
................................................................................................................................CAAAGGTCGTTAGTTCAA........................................................................................................................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......AAGCAAGACCAGAACGGCA................................................................................................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TGCTTTGAATACATA............................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................TTGTCAAAGGTCGTAAGT............................................................................................................................................................................................................................................................... 18 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CAGTCTTTACGCTCGGGTCTTGCCGTTTGAAACCAGTTGAAACGTGCTTCCACGCACATCAATTACACAAAAGTTTTATTCGGACACAAATATATTATAAAAGTTATCGAACGACGTATAGATTAACAGTTTGCAGCAATCAAGGTAATTGTAAGTATGATATACATCCTGAAGACAATTCAAACAGCCATCTTTCATCTATAATTTAATCTATAGATTTTTATATTAACAAATTGCGTGTAATTTCGAAAAACAATACGAAATTTATGTATTTTTATACATTTTATCATTATTACTTAGGATTGAAAAAAATTTTAAAAAACAAAAAACGCTTGCACAGTGTTGTCCGTTCATACTTCAGACGTCAGACCGATCCCTCCTAAACCTCCTTCGGGAA
**************************************************(((((.(((((((.((..........((((((....))))))..........)).)))).))))))))......((((...((((.((((((...)))))).......((((.((..((((((.....))))))..))))))....((((((((......)))))))).(((((....)))))..((((..(((((((..........))))))).((((((....)))))).......(((((.((((..(((......)))..)))).)))))...)))).))))...))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 SRR060689
160x9_testes_total
 GSM1528803
follicle cells		 V053
head
 M047
female body
 SRR060683
160_testes_total
 M028
head
 SRR060681
Argx9_testes_total
 V047
embryo
....................TGCCGTTTGAAACCAGTTGAA.................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........GCTCGGGTCTTGCCGTTTGGA.............................................................................................................................................................................................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CGCTTGCACCGTTTTGTCC................................................. 19 2 2 0.50 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................TATATTAAGGAATTGCGAGTA........................................................................................................................................................... 21 3 3 0.33 1 0 0 0 1 0 0 0 0 0
.................................................................CACAACAGTTTAATTCGG.......................................................................................................................................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 1 0 0 0 0
.......TTCGTTCTGGTCTTGCCGTT.................................................................................................................................................................................................................................................................................................................................................................................. 20 3 11 0.09 1 0 0 0 0 0 1 0 0 0
.............CGGGTCTTGCCGTTTCTA.............................................................................................................................................................................................................................................................................................................................................................................. 18 2 13 0.08 1 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................AATTTAATCTGGAGATTTTGA.............................................................................................................................................................................. 21 3 13 0.08 1 0 0 0 0 0 0 0 1 0
...................................................................CAAAAGTTTAATTCGGGC........................................................................................................................................................................................................................................................................................................................ 18 2 16 0.06 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:16807022-16807418 + dvi_17276 GTCAG---------------AAATGCGAGCCCAGAACGGCAAACTTTGGTCAACTTTGCACGAAGGTGCGTGTAGTTA---ATGTGTTTTCAAAATAAGCCTGTGTTTATATAATATTTTCAATAGCTTGCTGCATATCTAATTGTCAAACGTCGTTAGTTCCATTAACATTCATACTATA-------TGTAGGACTTCTGTTAAGTTTGTCGGTAGAAAGTAGATATTAAATTAGATATCT-----------AAAAATATAATTGTTTAACGCACATTAAA-----------GCTTTTTG-----------------------TTATGCTTTAAATACATAAAAATATGTAAAATAGTAATAATGAATCCTAACTTTTTTTAAAATTTTTTGTTTTTTGCGAACGTGTCACAACAGGCAAGTATGAAGTCTGCAGTCTGGCTAGGGAGGATTTGGAGGAAGCCCTT------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:13332810-13333146 - GGTGA---------------AAATGCGTGCACAGAACGGAAGACTTTGGTCAACATTGCACAATGGTGAGGAAAATTCGAATTTC-----------------------------------------------------------------------------------------------GC----------------------------------------------------------TTCTTAACTGGACATTAATAAAGTATTTTATAGAATTTTTA--------------------------------------------------------------------AATAAATTT------------------TT--------------------AAACATTTTAATTCAATAGGAAAGTATGAGCTACGCAGTTTGGCTAATGCTGATTTGGAGGAAGCTCTTAATGTAAGTATACACAAATATAAACATATACATGAATAAAAAAAGAATGTACAAGCGAATTTGGTTAACTCCAGCAATAATTAGCTCTGTAAAATAGCAATAGAAGTTATAAAATATTTGCAATGTTTTCTGTTAGAATTTTGC
droGri2 scaffold_14906:3238808-3239027 + TTCTA---------------AAAAC------------------------------------------------------------------------------------------------------------------------------------------------ATTTATAGTATA-------TGTAC---------------------TTAAACGTATTTATATGTCTACATGCAT-----------ATAAACACATTTATTCAACCTCCATCAAT-----------CATTTTTGGCCAGAGCGTCTCTCTATACCAATTTTAATAAAAATACGAAATAACATGTTGAAGTA------------------TA--------------------ATATTTAAATATTTAATAGGAAAGTTTGAGCTACGCAGCATGACCTTGTCAGATTTAGAGGAATCGCTT------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:16555040-16555099 + ATCTA---------------GAATGCGTGCTCAGAATGGTAGAATTTGGGCTAAGTTGCACGGTGGTGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:26368777-26368833 + GTGCG--------------AAAATGCGTGCACATAATGGAAGAGTCTGGGGAACTTTGCACGATGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGT------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_6:1698323-1698434 + CGCAA---------------AAATAACGTAAATC--------------------------------------------------A-------------------------------------------------------------------------------------TTAACAATTGATTCAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------------------ATGAT------------------AATTGGTTGTGTTTTTAGGCAAATTCAAAGTCCAGAGTGTAACCGAAGCTGATCTGGAAGAGGCGCTT------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12913:390842-390883 - AACAA---------------AACTTAAAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------------------------------------------------------------------------------------------------------------------------------------------------------GT--------------------------------------------------------CCCTAACTTTTTTTAAAAT-----------------------------------------TTT------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396712:1605713-1605851 - CATGA---------------AGGTATGTAGCTTAA----------------------------------------------ATAT-----------------------------------------------------------------------------------------------GT----------------------------------------------------------GT-----------GTGAATAAGTTTTTTTATGGTTTTGCAATATTAATTTTACTTTTTTTGT-------------------------------------------------------------------------------------------------------CCAAAATATCAGGAAAATTTGAAGTGCGTAGTGTCACCAAGTCGGATTTGGAAGAAGCTCTA------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302634:745491-745543 - C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCAAATTCGAGGTGCGCAGTGTCACCGCGTCGGATCTGGAGGAGGCGCTG------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000452569:96967-97051 - AAATT-------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------GT----------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------GTTA------------------AT--------------------TAAAATTGTTGTATTTTAGGACAATTTGAAGTGCGCAGTGTCACCGAATCCGATTTGGAAGAGGCGCTT------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491104:1481527-1481634 - AAAAA---------------TAATTAAT-----------------------------------------------------------------------------------------------------------------------------------------------------TT-AGCCAATTTG------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTTGTGTTA------------------TT--------------------TTAATTTCTTATTCTACAGGCAAGTTTGAAGTGCGCAGTGTCACCCAAGCCGATCTGGAAGAGGCTCTA------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000766583:21870-21992 - TGCAT---------------GAAAACAAATTCAA-----------------------------------------------------------------------------------------------------------------------------------------------TT-AACCAATTTT-------------------------------------------------------------------------------GAATGCTTATTA--------------------------------------------------------------------GTTGAATTA------------------TT--------------------TAAATTCCTTATTCTTCAGGCAAATTTGAAGTGCGCAGTGTCACCAAATCCTATCTGGAAGAGGCTCTA------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415671:7844-7899 - ATCCG---------------AAATGCGGAAAGAAAATGGAAGACTCTGGGGAAAGTTACACGATGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGT------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409796:117929-118044 + AAATT-------------------------------------------------------------------------------C-------------------------------------------------------------------------------------TTAAA-ATT-TTTCAATTTA-------------------------------------------------------------------------------ATAAGCGAATTA--------------------------------------------------------------------GCTTTACTT------------------AT--------------------CTAATTCGTTTTTCTTTAGGTAAATTTGAAGTCCGCAGTGTCACTGAATCCGATCTTGAAGAGGCGCTT------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrUextra:25334755-25334813 - ATAAT---------------AATAATATAATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------TTTT------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:2879218-2879297 + TTTAA---------------ATTTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCTTGAATTTGCAGGCAAATTTGAGGTGCGCAGTGTCACTCACTCCGACCTGGAAGAGGCGCTA------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_6:3045303-3045382 + TTTAA---------------ATTTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTCTTGAATTTGCAGGCAAATTTGAGGTGCGCAGTGTCACTCACTCCGACCTGGAAGAGGCGCTA------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4770:3216178-3216249 + GACCGATAGTCTTATCGAGAAAATGCGGAGGGAAAATGGAAGACTCTGGGGAACCCTACACGAAGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTG------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GTCAG---------------AAATGCGAGCCCAGAACGGCAAACTTTGGTCAACTTTGCACGAAGGTGCGTGTAGTTA---ATGTGTTTTCAAAATAAGCCTGTGTTTATATAATATTTTCAATAGCTTGCTGCATATCTAATTGTCAAACGTCGTTAGTTCCATTAACATTCATACTATA-------TGTAGGACTTCTGTTAAGTTTGTCGGTAGAAAGTAGATATTAAATTAGATATCT-----------AAAAATATAATTGTTTAACGCACATTAAA-----------GCTTTTTG-----------------------TTATGCTTTAAATACATAAAAATATGTAAAATAGTAATAATGAATCCTAACTTTTTTTAAAATTTTTTGTTTTTTGCGAACGTGTCACAACAGGCAAGTATGAAGTCTGCAGTCTGGCTAGGGAGGATTTGGAGGAAGCCCTT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCTGGCTAGGGAGGATTTGGAGG........................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGGATTTGGAGGAAGC....................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
....G---------------AAATGCGAGCCCAGAACGGCAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
droMoj3
GGTGA---------------AAATGCGTGCACAGAACGGAAGACTTTGGTCAACATTGCACAATGGTGAGGAAAATTCGAATTTC-----------------------------------------------------------------------------------------------GC----------------------------------------------------------TTCTTAACTGGACATTAATAAAGTATTTTATAGAATTTTTA--------------------------------------------------------------------AATAAATTT------------------TT--------------------AAACATTTTAATTCAATAGGAAAGTATGAGCTACGCAGTTTGGCTAATGCTGATTTGGAGGAAGCTCTTAATGTAAGTATACACAAATATAAACATATACATGAATAAAAAAAGAATGTACAAGCGAATTTGGTTAACTCCAGCAATAATTAGCTCTGTAAAATAGCAATAGAAGTTATAAAATATTTGCAATGTTTTCTGTTAGAATTTTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................ATTAATAAAGTATTTTATAGAATTTTTA--------------------------------------------------------------------......................................................................................................................................................................................................................................................................2811.001100000
GGTGA---------------AAATGCGTGCACAGAACGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
....A---------------AAATGCGTGCACAGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
droGri2
TTCTA---------------AAAAC------------------------------------------------------------------------------------------------------------------------------------------------ATTTATAGTATA-------TGTAC---------------------TTAAACGTATTTATATGTCTACATGCAT-----------ATAAACACATTTATTCAACCTCCATCAAT-----------CATTTTTGGCCAGAGCGTCTCTCTATACCAATTTTAATAAAAATACGAAATAACATGTTGAAGTA------------------TA--------------------ATATTTAAATATTTAATAGGAAAGTTTGAGCTACGCAGCATGACCTTGTCAGATTTAGAGGAATCGCTT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTGTCAGATTTAGAGGAAT.....................................................................................................................................................2311.00110
droWil2
ATCTA---------------GAATGCGTGCTCAGAATGGTAGAATTTGGGCTAAGTTGCACGGTGGTGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................GAATGGTAGAATTTGGGCTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.............................CTCAGAATGGTAGAATTTGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.....................AATGCGTGCTCAGAATGGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.....................AATGCGTGCTCAGAATGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.................................GAATGGTAGAATTTGGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..................................AATGGTAGAATTTGGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..........................................AATTTGGGCTAAGTTGCACGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
dp5
GTGCG--------------AAAATGCGTGCACATAATGGAAGAGTCTGGGGAACTTTGCACGATGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....G--------------AAAATGCGTGCACATAATGGAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
droPer2
CGCAA---------------AAATAACGTAAATC--------------------------------------------------A-------------------------------------------------------------------------------------TTAACAATTGATTCAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------------------ATGAT------------------AATTGGTTGTGTTTTTAGGCAAATTCAAAGTCCAGAGTGTAACCGAAGCTGATCTGGAAGAGGCGCTT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGAGTGTAACCGAAGCT..................................................................................................................................................................2111.001001000
droAna3
AACAA---------------AACTTAAAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------------------------------------------------------------------------------------------------------------------------------------------------------GT--------------------------------------------------------CCCTAACTTTTTTTAAAAT-----------------------------------------TTT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CATGA---------------AGGTATGTAGCTTAA----------------------------------------------ATAT-----------------------------------------------------------------------------------------------GT----------------------------------------------------------GT-----------GTGAATAAGTTTTTTTATGGTTTTGCAATATTAATTTTACTTTTTTTGT-------------------------------------------------------------------------------------------------------CCAAAATATCAGGAAAATTTGAAGTGCGTAGTGTCACCAAGTCGGATTTGGAAGAAGCTCTA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCAAATTCGAGGTGCGCAGTGTCACCGCGTCGGATCTGGAGGAGGCGCTG------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AAATT-------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------GT----------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------GTTA------------------AT--------------------TAAAATTGTTGTATTTTAGGACAATTTGAAGTGCGCAGTGTCACCGAATCCGATTTGGAAGAGGCGCTT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AAAAA---------------TAATTAAT-----------------------------------------------------------------------------------------------------------------------------------------------------TT-AGCCAATTTG------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTTGTGTTA------------------TT--------------------TTAATTTCTTATTCTACAGGCAAGTTTGAAGTGCGCAGTGTCACCCAAGCCGATCTGGAAGAGGCTCTA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGCAT---------------GAAAACAAATTCAA-----------------------------------------------------------------------------------------------------------------------------------------------TT-AACCAATTTT-------------------------------------------------------------------------------GAATGCTTATTA--------------------------------------------------------------------GTTGAATTA------------------TT--------------------TAAATTCCTTATTCTTCAGGCAAATTTGAAGTGCGCAGTGTCACCAAATCCTATCTGGAAGAGGCTCTA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATCCG---------------AAATGCGGAAAGAAAATGGAAGACTCTGGGGAAAGTTACACGATGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AAATT-------------------------------------------------------------------------------C-------------------------------------------------------------------------------------TTAAA-ATT-TTTCAATTTA-------------------------------------------------------------------------------ATAAGCGAATTA--------------------------------------------------------------------GCTTTACTT------------------AT--------------------CTAATTCGTTTTTCTTTAGGTAAATTTGAAGTCCGCAGTGTCACTGAATCCGATCTTGAAGAGGCGCTT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
ATAAT---------------AATAATATAATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------TTTT------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTTTTTTT------------TTTTTTT..............................................................................................................................................................................................................20207.45149000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001420060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------TT..................................................................................................................................................24205.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037000063000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TTTTT------------TTTTTTTTT--------------------------------------------------------TTT.................................................................................................................................................17200.851700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------T...................................................................................................................................................24200.801600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------TT..................................................................................................................................................25200.551100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................AAATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------....................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AATTTTTTTTTTTT------------TTTT.................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TAATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAT............................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATAATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAA.............................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------....................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------TTTT.................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTT....................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------TTTT------------------------------------------------------------------------------------------------------------------------------------------------35200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AATTTTTTTTTTTT------------TTTTT................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTTTTTTT------------TTTTTT...............................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------T...................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAT............................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------TTTTTTTT.............................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................AAATTTTTTTTTTTT------------TTTTTT...............................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------TTTTT................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTTTTTTTTT------------TTTTTTTT.............................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAT............................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTT..................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------TTT.................................................................................................................................................32200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------TTTTT................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------TTT..................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTT------------TTTTTT...............................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................TATAATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATT...........................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATAATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTT..........................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTT......................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTT------------TTTTTTTTT--------------------------------------------------------TTTT------------------------------------------------------------------------------------------------------------------------------------------------22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATAATATAATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATT...........................................................................................................................................................................................................................................30200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------TTTT.................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------TT..................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------.....................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTT...................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TAATATAATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA..............................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------.....................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TAATATAATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATT...........................................................................................................................................................................................................................................29200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTTTTTTTTT------------TTTTTTTTT--------------------------------------------------------T...................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................AAATTTTTTTTTTTT------------TTT..................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTT...................................................................................................................................................................................................................................29200.0510000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTT..................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTT------------TTTTTTTT.............................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTTTTTT------------T....................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AATAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTT.......................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TAATAATAATATACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTTTT.....................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTTAA---------------ATTTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCTTGAATTTGCAGGCAAATTTGAGGTGCGCAGTGTCACTCACTCCGACCTGGAAGAGGCGCTA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TTTAA---------------ATTTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTCTTGAATTTGCAGGCAAATTTGAGGTGCGCAGTGTCACTCACTCCGACCTGGAAGAGGCGCTA------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGTGCGCAGTGTCACTCACTCC..................................................................................................................................................................2611.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCCGACCTGGAAGAGGC....................................................................................................................................................2011.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTCACTCACTCCGACCTGGAAGA.......................................................................................................................................................2611.0010010
droEre2
GACCGATAGTCTTATCGAGAAAATGCGGAGGGAAAATGGAAGACTCTGGGGAACCCTACACGAAGGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTG------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................TGCGGAGGGAAAATGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000

Generated: 05/16/2015 at 09:27 PM