ID:

dvi_17265

 Coordinate:

scaffold_13047:16762094-16762244 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.4 -36.7 -36.7

Flybase annnotation

CDS [Dvir\GJ24568-cds]; exon [dvir_GLEANR_9838:1]; intron [Dvir\GJ24568-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

-----------------------------------------------###---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTGTGAATTTTCATTGTCGTGTGTGAAAAAAAACATAAAAACTCAATATGGTAAGTTATATATTATATTTATATATGTAGTATTTTTTCTTTTTTACAATTTTCATTTATTGTGAATGAAATTTTTCATTGGCGACTCACCGAGTACAGCCATGTTTCAAGATGGCGTTCTCGCAAATGTGATGACGTCATGAAGAAATGTAGTTGGGGGAAAAAAAGTTTGTGTAGCGAAATTAACATAAACCCAAAATT
**************************************************.........(((((((((......)))))))))..((((...((((((((........)))))))).))))((((((((.((((..((((((((.((.(((((........))))))).)))).....))))...))))))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060679
140x9_testes_total
 M061
embryo
 V047
embryo
 SRR060678
9x140_testes_total
 V116
male body		 SRR060667
160_females_carcasses_total
 SRR060658
140_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 V053
head
 SRR060655
9x160_testes_total
 SRR060656
9x160_ovaries_total
 SRR060672
9x160_females_carcasses_total
 SRR060683
160_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 SRR060681
Argx9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060689
160x9_testes_total
 SRR1106727
larvae
 SRR060654
160x9_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060660
Argentina_ovaries_total
....GAATTTTCATTGTCGTGTGT................................................................................................................................................................................................................................... 20 0 1 8.00 8 0 2 2 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..GTGAATTTTCATTGTCGTGTGT................................................................................................................................................................................................................................... 22 0 1 5.00 5 1 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GAATTTTCATTGTCGTGTGTGA................................................................................................................................................................................................................................. 22 0 1 4.00 4 0 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GAATTTTCATTGTCGTGTGTGAAAA.............................................................................................................................................................................................................................. 25 0 1 3.00 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........TTTCATTGTCGTGTGTGA................................................................................................................................................................................................................................. 18 0 1 3.00 3 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTTCATTGTCGTGTGTGAAA............................................................................................................................................................................................................................... 20 0 1 3.00 3 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATTGTCGTGTGTGAAAAAAAACATAA..................................................................................................................................................................................................................... 26 0 1 2.00 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....AATTTTCATTGTCGTGTGT................................................................................................................................................................................................................................... 19 0 1 2.00 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................AACTCAATATGGTAAGTT.................................................................................................................................................................................................. 18 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GAATTTTCATTGTCGTGTGTG.................................................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......ATTTTCATTGTCGTGTGTGAAA............................................................................................................................................................................................................................... 22 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TGTGAATTTTCATTGTCGTGTGTGAA................................................................................................................................................................................................................................ 26 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
CTGTGAATTTTCATTGTCGTGTGT................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATTGTCGTGTGTGAAAAAAAAC......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GAATTTTCATTGTCGTGTA.................................................................................................................................................................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........ACATTGTCGTGTGTGAAAAAAAACA........................................................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATTGTCGTGTGTGAAAAAAAACATA...................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................AAAAAAGGTTTGTGTAGCGAA.................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GAATTTTCATTGTCGTGT..................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GAATTTTCATTGTCGTGTG.................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................AAAAAACATAAAAACTCAAT............................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTTCATTGTCGTGTGTGAAAAAAAACA........................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................AAACTCAATATGGTAAGTTATA............................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TTGTCGTGTGTGAAAAAAAACA........................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TTCATTGTCGTGTGTGAAAAAAAAC......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................ATGGTAAGTTATATATTAT......................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TCATTGTCGTGTGTGAAAAAAAACATA...................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....AATTTTCATTGTCGTGTGTG.................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AGTTGGGGGAAAAAAAGT................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........CATTGTCGTGTGTGAAAAA............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CAAGATGGCGTTCTCGCAACT......................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................GAAAAAATGTAGTTGGGGGAAAAAAAG................................. 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GGGAATTTTCATTGTCGTGTGT................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AGGAAAGTTTGTGTAGCGAAA................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TCAATATGGTAAGTTATATAT............................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AAAACATAAAAACTCAATATG......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CGTGTGTGAAAAAAAACATAAAAAC................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GAATTTTCATTGTCGTGTTTG.................................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GAATTTTCATTGTCGTGTGTGAA................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GACTCACCGAGTGCAGCCATG................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTTTCATTGTCGTGTGTGAAA............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TTCATTGTCGTGTGTGAA................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TGAAATTTCATTGTCGTGTGT................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............ATTGTCGTGTGTGAAAAAAAA.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCAAATGTGATGACGTCAAGAAAA....................................................... 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTTCATTGTCGTGTGTGAAAAAA............................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TGTGAATTTTCATTGTCGTGT..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.TGTGAATTTTCATTGTCGTGTG.................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GTGAATTTTCATTGTCGTGTGTGA................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATTTTCATTGTCGTGTGTGAAAA.............................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....GGATTTTCATTGTCGTGTGTGAAAAA............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TGTGAATTTTCATTGTCGTGTGT................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTTCATTGTCGTGTGTGAAAAA............................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TTCATTGTCGTGTGTGAAA............................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTTCATTGTCGTGTGTGAA................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TTCATTGTCGTGTGTGAAAAAAAC.......................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTTCATTGTCGTGTGTGAAAA.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TCATTGTCGTGTGTGAAAAAAAACATAA..................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TCATTGTCGTGTGTGAAA............................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GCAAATGTGATGACGTCA............................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................AAAAACATAAAAACTCAATATGCGT...................................................................................................................................................................................................... 25 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TGGGGGGAAATAAAGTTTGT............................ 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTGGGGGAAAAGAGGTTGGT............................ 20 3 7 0.43 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........TCATTGTCGTCGGTGAAAA.............................................................................................................................................................................................................................. 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TCATTGGCGTCTGTTAAAAAA............................................................................................................................................................................................................................ 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........TCATTGGCGTCTGAGAAAAAAA........................................................................................................................................................................................................................... 22 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............TGTCGTGTGTGAAAAAAACA......................................................................................................................................................................................................................... 20 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACAGCCATCTTTCAGGAT........................................................................................ 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TGTCGCGTGTTAAAAAAAA.......................................................................................................................................................................................................................... 19 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TCAAGATGGTTCGTTATATA............................................................................................................................................................................................. 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................TCTACTTGGAGGAAAAAAAG................................. 20 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........TAATTGTCGTGTGTAAAA............................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CTACGACCATGTTTCAAG.......................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATTTTCATTGTCGTCTGG................................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GACACTTAAAAGTAACAGCACACACTTTTTTTTGTATTTTTGAGTTATACCATTCAATATATAATATAAATATATACATCATAAAAAAGAAAAAATGTTAAAAGTAAATAACACTTACTTTAAAAAGTAACCGCTGAGTGGCTCATGTCGGTACAAAGTTCTACCGCAAGAGCGTTTACACTACTGCAGTACTTCTTTACATCAACCCCCTTTTTTTCAAACACATCGCTTTAATTGTATTTGGGTTTTAA
**************************************************.........(((((((((......)))))))))..((((...((((((((........)))))))).))))((((((((.((((..((((((((.((.(((((........))))))).)))).....))))...))))))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 V053
head
 SRR060665
9_females_carcasses_total
...............................................................................................................................................................................................CTTCTTTACATCAACCCCCTT....................................... 21 0 1 1.00 1 1 0 0 0
........................................................................................................................................AGTGGCTCATGTCGGTACGAA.............................................................................................. 21 1 1 1.00 1 0 1 0 0
............................................................................................................................................GCTCATGTCGGTACAAAGTTC.......................................................................................... 21 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................................CGCTCTAATTGTTTCTGGGT..... 20 3 14 0.14 2 0 0 2 0
..............................................................................................................ACACTTACTTAAAAGAGTAA......................................................................................................................... 20 2 8 0.13 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:16762044-16762294 + dvi_17265 CTGTGAATTTT-CA----------TTGTCGTGTGTGAAAAAAAA--CATA---AAAACTCAATATGGTAAGTTATATA---------------TTATATTTATATAT-GTAGTA------------------TTTTTTCTTTTTTACAATTTTCATTTATTGTGAATGAAA----T---------------------TTTTCATTGG------------CGACTCAC-CGAGTACAGC---C---ATGT--------------TTCAAGATGGCGTTCTCG------------------CAAATGTGATGACGTCATGAAGA----------AATGTA---------------------------GTTGGGGGA--------------------AA---AAAA---GT-----------------TT---------------GTGTA------------------------GCGAAATTAACATAAAC---------CCAAAATT
droMoj3 scaffold_6540:13376607-13376849 - CTATAAAATTTTCT----------TTGTCGTGTGAAAAAAAAATTTTATA---AAAACTCAATATGGTAAGTGAAA-------A--TA-T-TT---TTT-CATATTTTGCTGAAAGTA------AAAAAAAT----------------------ATTTTTATTCATTGAAA----TT-TGGGTGTC---------------ACTGCC------------CAAC--AT-GGAGTGAAGC---C---ATGT--------------TTCAAGATGGCGGCACCG------------------CAAAAGTGGTGACGTCATGAGAA-------------------------------------------------------------------------AAATAAAA-------G--------------------------------------------ATTTTGGTTATATTTCGAGAAAATATCTCATAA---------CCATGATC
droGri2 scaffold_14906:3190792-3191057 + CTGTAAGTTTT-CT----------TTGTCGCGTGTGAAAAAAGTGTAAAAAGAAAAACTCAATATGGTAAGTAATTAATCATTT--TC-T-AC---TTT-TTTTTGTCG----------------------------------------------------TTGAATAAAATAAATTTT---GGTCGTGT-------------TGGGGACTACTCAAACTAAGA-ATTCG-GTCCACT---T---TTTGATCAACTACAAATCCACAAAATGGCGTGTTTA------------------CCGATGTGATGACGTCATCGAGC----------AATTTT----------ATT-C-AAAAGTTG----------------------------ATTTA----AAAAAATGTCTGG--------------------------------------ATTTTGCAT-------------------------ATAA---------CTAGAATC
droWil2 scf2_1100000004943:16542060-16542126 - TTGTGAATATT-TTTATTCCCG-TTTGTCGCGAGTGAAAAAGTAAAAAAA---AAACTTCAATATGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:26326665-26326946 + TTGTGAATTTC-CT-------G--TTTTCGTGTGTGAAAGTAAAGTAGAA---AAAACTCAATATGGTAAGTTGTT-------T--TA-C-AC---TGT-TTTAAGTTAATAGGGTAT------AAGCAGGC----------------------ATTTAGATTGAATAAAA----GT-CAAGCGTCGTGT--------------------------------------------CGGCAAAG---TTTT--------------TGCAAAATGGCCACCGCACCCACGTT--CAGTAAA-AAAAAAAGATGACGTCATGCCAA--------------------GAAACTAGA-G-AAAAGTTGTAAAAAAGAAGT--------------------AAAAT-------GTGTGAAAAGTTGGGAAGATT---------------GAATAGTAATATTATTT-------------------------ATAG---------CGAAAACC
droPer2 scaffold_6:1656517-1656802 + TTGTGAATTTC-CT-------G--TTTTCGTGTGTGCAAGTAAAGTAGAAAAAAAAACTCAATATGGTAAGTTGTT-------T--TA-C-AC---TGT-TTTAAGTTAATAGGGGAT------AAGCAGGC----------------------ATTTAGATTGAATAAAA----GT-CAAGCGTCGTGT--------------------------------------------CGGCAAAG---TTTT--------------TGCAAAATGGCCACCGCACGCACGTT--CAGTAAAAAAAAAAAGATGACGTCATGCCAA--------------------GAAACTAGA-G-AAAAGTTGTAAAAAAGAAGT--------------------AACAT-------GTGTGAAAAGTTGGGAAGATT---------------GAATAGTAATATTATTT-------------------------ATAG---------CGAAAACC
droAna3 scaffold_13340:2693860-2693924 + TTGTGAATTTT-TT-------CCTTTGTCGCGTGTGAAAAAAAAAAACTA---AAAACTCAATATGGTAAGTTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396712:1645297-1645356 - -TGTGAACTTT-T-----------TTGTCGCGTGTGAAAAAAAACTACTA---AAAACTCAATATGGTAAGTTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302639:2007372-2007429 - -TGTGAATTTT-CC----------TTGTCGCGTGTGAACAAAA---ACTA---AAAACTCAATATGGTGAGTAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000452569:142357-142412 - CTGTGAATTTT-C-----------TTGTCGCGTGTGAAAAACC-CCACTA---AACACTCAATATGGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491008:2419589-2419669 - GCAAAGA---------------------------------AACA--CAAA---ATAAATCTAAATTATAAATTATATA---------------CTATATATAAAT------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATTTTATTATTT-------------------------TCCT---------TAAATTTG
droRho1 scf7180000777298:7666-7723 - CTGTGAATTTT-CC----------TTGTCGCGTGTGAAAAACCTCTAATA---AACTCTCAATATGGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302155:1728717-1728796 - CTGTGAATTTT-CC----------TTGTCGCGTGTGAAAAAC--CCACTA---AAAACTCAATATGGTGAGTACAT-------T----------TCTGTGAACATTT-GTAGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415722:580051-580163 - TGTACAACTAATCA----------TAAAAATGTTTTAAAAAAATATATGAATAT-----------------------------------------ATATTTGTGTTT-GAAATA------------------GTTTTCATTTTTAAATATTTTATTGTATTT------------------------------------------------------------------------------------------------------TGAAGAGAACTTCCGA-TTCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409796:72549-72829 + CTGTGAATTTT-CC----------TTTTCGCGTGTGAAAAACCTCCACTA--AAAAACTCAATATGGTGAGTAAAA-------C--AAATAAATTCTGTGAAAATTACGTAGAATGTATTCGAGAA---------------------------------------------A----------------------AAAATGTATTGGG------------GAA----AGCG-AAGCGTT---TTTTTTTT--------------CGCAATATGGCGGCCGG-TCTTTGCATGT-TTTTC-GAAAAGTGATGACGTCATGTTCC----------TCTTTC----GGA---AGA-G-AAAA----------------CGCCGTGTAAAGCTAGAGGAA----ATAG---GT-----------------GT---------------GTACT------------------------GTAAAATGTATCTAAATTCAAATGCATCAAAATT
dm3 chr3R:2912415-2912609 + CTGTGAATTTT-CC----------TTGTCGCGTGTGAAACACTTCCAATA---AAAACTCAATATGGTGAGTACTT-------TAAAAAAAAATCTAGTGAA-ATAAT----------GCTGAAAA---------------------------------------------GAAATT-T-------GTGTGGGCAAAATTCAATGGG------------CAAAA-ACGCG-ATGCGGC---T---TTTT--------------CTCAAAATGGCGGCCGG-CCTGCGTT--TTTTCCT-CAAAAGTGATGACGTCATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:2836590-2836783 + CTGTGAATTTT-CC----------TTGTCGCGTGTGAAACACTTCCAATA---AAAACTCAATATGGTGAGTACTA-------A-AAAAAAAATCTAGTGAA-ATAAT----------TTCGAAAA---------------------------------------------TAAATT-T-------GTGGGGGCAAAATTCAATGGG------------CAAAA-ACTCG-ACGCGGC---T---TTTT--------------CTCAAAATGGCGGCCGG-CCTGCGTT--TTTTCTT-CAAAAGTGATGACGTCATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_6:3003278-3003542 + CTGTGAATTTT-CC----------TTGTCGCGTGTGAAACACTTCCAATA---AAAACTCAATATGGTGAGTACTA-------A--AAAAAAATCTAGTGAA-ATAAT----------TTCGAAAA---------------------------------------------AAAATTTT-------GTGGGGGCAAAATTCAATGAG------------CAAAA-ACTCG-ACGCGGC---T---TTTT--------------CTCAAAATGGCGGCCGG-CCTGCGTT--TTTTCTT-CAAAAGTGATGACGTCATGCCGATTTTTTTTTTTTGTTC----GCAATGAGA-G-AAAT----------------GGCTCTTAAAATCTAGATCAA----AAAGAAT---------------------------------------------------------------------------------T---------TCAATTAT
droYak3 v2_chr3R_random_061:4546-4605 + CTGTGAATTTT-CC----------TTGTCGCGTGTGAAACACCTCCATT----AAAACTCAATATGGTGAGTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4770:3172735-3173040 + CTGTGAATTTT-CA----------TTGTCGCGTGTGAAACACCTCCACTA---AAAACTCAATATGGTAAGTAGTT-------C--AA-AAAATATAGTAAA-ATAAT----------ATAGAGAA---------------------------------------------AAAATT-G-------GTGC-GGCAAAATTCAATGGG------------CAA---ACGCG-ACGCGGC---T---TTTT--------------TTCAAAATGGCGGCCGG-CAAGCGTT--T-TTCTC-GAAAAGTGATGACGTCATGCCTT--AC------ATTTTTATATGAAAAGAGAAGAATAAGATGATCGATGGGAGA--------------------AAAAT-------GCAAGAAATATTGCTATGCCGGCGAAACGCTTCTGCGATAACTTATTTTCTTA-------------------------ATTT---------ACAAAATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTGTGAATTTT-CA----------TTGTCGTGTGTGAAAAAAAA--CATA---AAAACTCAATATGGTAAGTTATATA---------------TTATATTTATATAT-GTAGTA------------------TTTTTTCTTTTTTACAATTTTCATTTATTGTGAATGAAA----T---------------------TTTTCATTGG------------CGACTCAC-CGAGTACAGC---C---ATGT--------------TTCAAGATGGCGTTCTCG------------------CAAATGTGATGACGTCATGAAGA----------AATGTA---------------------------GTTGGGGGA--------------------AA---AAAA---GT-----------------TT---------------GTGTA------------------------GCGAAATTAACATAAAC---------CCAAAATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....GAATTTT-CA----------TTGTCGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2018.008000200000000000000000000000002000010000000000000000000000002010
..GTGAATTTT-CA----------TTGTCGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.005001000001000011000000000000001000000000000000000000000000000000
....GAATTTT-CA----------TTGTCGTGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.004000001000000000000000000000001000000000000000000000000000001010
....GAATTTT-CA----------TTGTCGTGTGTGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003000100000000000000010010000000000000000000000000000000000000000
........TTT-CA----------TTGTCGTGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003000000000000000000000000000001000000010000000000000000000001000
........TTT-CA----------TTGTCGTGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003000000000000001100000000000001000000000000000000000000000000000
.............A----------TTGTCGTGTGTGAAAAAAAA--CATA---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000001000000000000000000000000000000000000000001000
.....AATTTT-CA----------TTGTCGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000100000000010000000000000000000000000000000000000000000000000
.......................................................AACTCAATATGGTAAGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000020000000000000000000000000000000000
....GAATTTT-CA----------TTGTCGTGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000100000100000000000000000000000
......ATTTT-CA----------TTGTCGTGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000011000000000000000000000000000000000
.TGTGAATTTT-CA----------TTGTCGTGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002001000000000000000000000000000000000100000000000000000000000000
CTGTGAATTTT-CA----------TTGTCGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.............A----------TTGTCGTGTGTGAAAAAAAA--C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
....GAATTTT-CA----------TTGTCGTGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.............A----------TTGTCGTGTGTGAAAAAAAA--CATA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000010000000
....GAATTTT-CA----------TTGTCGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
....GAATTTT-CA----------TTGTCGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
......................................AAAAAA--CATA---AAAACTCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
........TTT-CA----------TTGTCGTGTGTGAAAAAAAA--CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................AAACTCAATATGGTAAGTTATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
........................TTGTCGTGTGTGAAAAAAAA--CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
.........TT-CA----------TTGTCGTGTGTGAAAAAAAA--C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
...............................................................ATGGTAAGTTATATA---------------TTAT........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000001000000000000000000000000000000000000
..........T-CA----------TTGTCGTGTGTGAAAAAAAA--CATA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000001000000000000000000000000000000000000000000000000000
.....AATTTT-CA----------TTGTCGTGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................A---------------------------GTTGGGGGA--------------------AA---AAAA---GT-----------------................................................................................1811.001000000001000000000000000000000000000000000000000000000000000000
............CA----------TTGTCGTGTGTGAAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
..........................................................TCAATATGGTAAGTTATATA---------------T...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................AAAA--CATA---AAAACTCAATATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
............................CGTGTGTGAAAAAAAA--CATA---AAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
....GAATTTT-CA----------TTGTCGTGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......TTTT-CA----------TTGTCGTGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.........TT-CA----------TTGTCGTGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000100000000000000000000000000000000000000000000000000000000
.............A----------TTGTCGTGTGTGAAAAAAAA--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
........TTT-CA----------TTGTCGTGTGTGAAAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.TGTGAATTTT-CA----------TTGTCGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.TGTGAATTTT-CA----------TTGTCGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..GTGAATTTT-CA----------TTGTCGTGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
......ATTTT-CA----------TTGTCGTGTGTGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000001000000000000000000000000000
.TGTGAATTTT-CA----------TTGTCGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001000000000000000000000000000000000000000000000000000000000
........TTT-CA----------TTGTCGTGTGTGAAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
.........TT-CA----------TTGTCGTGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000100000000000000000000000000000
........TTT-CA----------TTGTCGTGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
.........TT-CA----------TTGTCGTGTGTGAAAAAAAC--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000010000000000000000000000000
........TTT-CA----------TTGTCGTGTGTGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........T-CA----------TTGTCGTGTGTGAAAAAAAA--CATA---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
..........T-CA----------TTGTCGTGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................G------------------CAAATGTGATGACGTCA.............................................................................................................................................................................................1811.001000000100000000000000000000000000000000000000000000000000000000
.......................................AAAAA--CATA---AAAACTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501000000000000000001000000000000000000000000000000000000000000000
.........................TGTCGTGTGTGAAAAAAAC--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201000000000000000000000000000100000000000000000000000000000000000
droMoj3
CTATAAAATTTTCT----------TTGTCGTGTGAAAAAAAAATTTTATA---AAAACTCAATATGGTAAGTGAAA-------A--TA-T-TT---TTT-CATATTTTGCTGAAAGTA------AAAAAAAT----------------------ATTTTTATTCATTGAAA----TT-TGGGTGTC---------------ACTGCC------------CAAC--AT-GGAGTGAAGC---C---ATGT--------------TTCAAGATGGCGGCACCG------------------CAAAAGTGGTGACGTCATGAGAA-------------------------------------------------------------------------AAATAAAA-------G--------------------------------------------ATTTTGGTTATATTTCGAGAAAATATCTCATAA---------CCATGATCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................TCAAGATGGCGGCACCG------------------CAA...........................................................................................................................................................................................................2012.002020000
.......ATTTTCT----------TTGTCGTGTGAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.......ATTTTCT----------TTGTCGTGTGAAAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000002
....AAAATTTTCT----------TTGTCGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................................................................................................................................................................................................................................................................................................CAAAAGTGGTGACGTCATGAGAA-------------------------------------------------------------------------AA............................................................................................................2511.001000001
........TTTTCT----------TTGTCGTGTGAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..ATAAAATTTTCT----------TTGTCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..ATAAAATTTTCT----------TTGTCGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100
....AAAATTTTCT----------TTGTCGTGTGAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........TTTCT----------TTGTCGTGTGAAAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................GT--------------TTCAAGATGGCGGCACC.................................................................................................................................................................................................................................1911.001000001
..........................................ATTTTATA---AAAACTCAATATGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.251100000
droGri2
CTGTAAGTTTT-CT----------TTGTCGCGTGTGAAAAAAGTGTAAAAAGAAAAACTCAATATGGTAAGTAATTAATCATTT--TC-T-AC---TTT-TTTTTGTCG----------------------------------------------------TTGAATAAAATAAATTTT---GGTCGTGT-------------TGGGGACTACTCAAACTAAGA-ATTCG-GTCCACT---T---TTTGATCAACTACAAATCCACAAAATGGCGTGTTTA------------------CCGATGTGATGACGTCATCGAGC----------AATTTT----------ATT-C-AAAAGTTG----------------------------ATTTA----AAAAAATGTCTGG--------------------------------------ATTTTGCAT-------------------------ATAA---------CTAGAATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..GTAAGTTTT-CT----------TTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00220
..GTAAGTTTT-CT----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202
...TAAGTTTT-CT----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
.......TTTT-CT----------TTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
............CT----------TTGTCGCGTGTGAAAAAAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
............CT----------TTGTCGCGTGTGAAAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
droWil2
TTGTGAATATT-TTTATTCCCG-TTTGTCGCGAGTGAAAAAGTAAAAAAA---AAACTTCAATATGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................G-TTTGTCGCGAGTGAAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19115.0015002130
......ATATT-TTTATTCCCG-TTTGTCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2319.00900180
........ATT-TTTATTCCCG-TTTGTCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2119.00902160
.....................G-TTTGTCGCGAGTGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1817.00731030
........ATT-TTTATTCCCG-TTTGTCGCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.00602310
........ATT-TTTATTCCCG-TTTGTCGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.00604020
..........T-TTTATTCCCG-TTTGTCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.00500050
.............TTATTCCCG-TTTGTCGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.00420020
......ATATT-TTTATTCCCG-TTTGTCGCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300120
............TTTATTCCCG-TTTGTCGCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300120
........ATT-TTTATTCCCG-TTTGTCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00301020
.....................G-TTTGTCGCGAGTGAAAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200020
........ATT-TTTATTCCCG-TTTGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
...............ATTCCCG-TTTGTCGCGAGTGAAAAAGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00201100
..........T-TTTATTCCCG-TTTGTCGCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00202000
....................CG-TTTGTCGCGAGTGAAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
.....................G-TTTGTCGCGAGTGAAAAAGTAAAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200110
..........T-TTTATTCCCG-TTTGTCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00210010
...............ATTCCCG-TTTGTCGCGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
.......................TTTGTCGCGAGTGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00210010
.........................TGTCGCGAGTGAAAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
.......TATT-TTTATTCCCG-TTTGTCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200020
.......TATT-TTTATTCCCG-TTTGTCGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00220000
.......TATT-TTTATTCCCG-TTTGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.....................G-TTTGTCGCGAGTGAAAAAGTAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...............ATTCCCG-TTTGTCGCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.........................TGTCGCGAGTGAAAAAGTAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.....................G-TTTGTCGCGAGTGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
..................CCCG-TTTGTCGCGAGTGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
........ATT-TTTATTCCCG-TTTGTCGCGAGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
....................CG-TTTGTCGCGAGTGAAAAAGTAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.................................GTGAAAAAGTAAAAAAA---AAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.........TT-TTTATTCCCG-TTTGTCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....................CG-TTTGTCGCGAGTGAAAAAGTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
...............ATTCCCG-TTTGTCGCGAGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
........ATT-TTTATTCCCG-TTTGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.....................G-TTTGTCGCGAGTGAAAAAGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
..................CCCG-TTTGTCGCGAGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
........................TTGTCGCGAGTGAAAAAGTAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001
..............TATTCCCG-TTTGTCGCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
......ATATT-TTTATTCCCG-TTTGTCGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..............TATTCCCG-TTTGTCGCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
........ATT-TTTATTCCCG-TTTGTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
........................TTGTCGCGAGTGAAAAAGTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
......ATATT-TTTATTCCCG-TTTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.....AATATT-TTTATTCCCG-TTTGTCGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.......TATT-TTTATTCCCG-TTTGTCGCGAGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
........ATT-TTTATTCCCG-TTTGTCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
............TTTATTCCCG-TTTGTCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
....................CG-TTTGTCGCGAGTGAAAAAGTAAAAAAA---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100100
....................CG-TTTGTCGCGAGTGAAAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.......................TTTGTCGCGAGTGAAAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
............TTTATTCCCG-TTTGTCGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
..............TATTCCCG-TTTGTCGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
....................CG-TTTGTCGCGAGTGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
.............TTATTCCCG-TTTGTCGCGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.....................G-TTTGTCGCGAGTGAAAAAGTAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
.....................G-TTTGTCGCGAGTGAAAAAGTAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
............................CGCGAGTGAAAAAGTAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...............ATTCCCG-TTTGTCGCGAGTGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.........................................GTAAAAAAA---AAACTTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101000
dp5
TTGTGAATTTC-CT-------G--TTTTCGTGTGTGAAAGTAAAGTAGAA---AAAACTCAATATGGTAAGTTGTT-------T--TA-C-AC---TGT-TTTAAGTTAATAGGGTAT------AAGCAGGC----------------------ATTTAGATTGAATAAAA----GT-CAAGCGTCGTGT--------------------------------------------CGGCAAAG---TTTT--------------TGCAAAATGGCCACCGCACCCACGTT--CAGTAAA-AAAAAAAGATGACGTCATGCCAA--------------------GAAACTAGA-G-AAAAGTTGTAAAAAAGAAGT--------------------AAAAT-------GTGTGAAAAGTTGGGAAGATT---------------GAATAGTAATATTATTT-------------------------ATAG---------CGAAAACCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....GAATTTC-CT-------G--TTTTCGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050400100000
.TGTGAATTTC-CT-------G--TTTTCGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050500000000
.TGTGAATTTC-CT-------G--TTTTCGTGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040200000200
....GAATTTC-CT-------G--TTTTCGTGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030200100000
........TTC-CT-------G--TTTTCGTGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030300000000
...........................TCGTGTGTGAAAGTAAAGTAGAA---AA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030100000200
..GTGAATTTC-CT-------G--TTTTCGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
...............................................................................................................AGGGTAT------AAGCAGGC----------------------ATT............................................................................................................................................................................................................................................................................................................................................................1812.0020010000001
.......................................GTAAAGTAGAA---AAAACTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020020000000
..........................TTCGTGTGTGAAAGTAAAGTAGAA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
............................................GTAGAA---AAAACTCAATATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
...........................TCGTGTGTGAAAGTAAAGTAGAA---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000001100
.TGTGAATTTC-CT-------G--TTTTCGTGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020200000000
............................CGTGTGTGAAAGTAAAGTAGAA---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020100000001
.............T-------G--TTTTCGTGTGTGAAAGTAAAGTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000200
....GAATTTC-CT-------G--TTTTCGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
..........................TTCGTGTGTGAAAGTAAAGTAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000001
........TTC-CT-------G--TTTTCGTGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000001000
......ATTTC-CT-------G--TTTTCGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......ATTTC-CT-------G--TTTTCGTGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.........................TTTCGTGTGTGAAAGTAAAGTAGAA---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........TC-CT-------G--TTTTCGTGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
............................CGTGTGTGAAAGTAAAGTAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
...................................................................................................................TAT------AAGCAGGC----------------------ATTTAGATTG.....................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................GAAAGTAAAGTAGAA---AAAACTCAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....................G--TTTTCGTGTGTGAAAGTAAAGTAGAA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..........................TTCGTGTGTGAAAGTAAAGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................GTGAAAGTAAAGTAGAA---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
............................CGTGTGTGAAAGTAAAGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........TC-CT-------G--TTTTCGTGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
......ATTTC-CT-------G--TTTTCGTGTGTGAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..GTGAATTTC-CT-------G--TTTTCGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................TTCGTGTGTGAAAGTAAAGTAGAA---AA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100000
......................................AGTAAAGTAGAA---AAAACTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
...........................TCGTGTGTGAAAGTAAAGTAGAA---AAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................TCGTGTGTGAAAGTAAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............................GTGTGTGAAAGTAAAGTAGAA---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............................GTGTGTGAAAGTAAAGTAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
....GAATTTC-CT-------G--TTTTCGTGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......ATTTC-CT-------G--TTTTCGTGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
.TGTGAATTTC-CT-------G--TTTTCGTGTGTGAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000001000
.......................................GTAAAGTAGAA---AAAACTCAATATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........................TTCGTGTGTGAAAGTAAAGTAGAA---AAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
.......TTTC-CT-------G--TTTTCGTGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................................................................AGTTAATAGGGTAT------AAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................GTGAAAGTAAAGTAGAA---AAAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....AATTTC-CT-------G--TTTTCGTGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..GTGAATTTC-CT-------G--TTTTCGTGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
..........................TTCGTGTGTGAAAGTAAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................TAAAGTAGAA---AAAACTCAATATGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..GTGAATTTC-CT-------G--TTTTCGTGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......TTTC-CT-------G--TTTTCGTGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
....................................................................................................................AT------AAGCAGGC----------------------ATTTAGAT.......................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................AAAT-------GTGTGAAAAGTTGGGAAG.................................................................................2211.0010100000000
............................CGTGTGTGAAAGTAAAGTAGAA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................AAGTAAAGTAGAA---AAAACTCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
TTGTGAATTTC-CT-------G--TTTTCGTGTGTGCAAGTAAAGTAGAAAAAAAAACTCAATATGGTAAGTTGTT-------T--TA-C-AC---TGT-TTTAAGTTAATAGGGGAT------AAGCAGGC----------------------ATTTAGATTGAATAAAA----GT-CAAGCGTCGTGT--------------------------------------------CGGCAAAG---TTTT--------------TGCAAAATGGCCACCGCACGCACGTT--CAGTAAAAAAAAAAAGATGACGTCATGCCAA--------------------GAAACTAGA-G-AAAAGTTGTAAAAAAGAAGT--------------------AACAT-------GTGTGAAAAGTTGGGAAGATT---------------GAATAGTAATATTATTT-------------------------ATAG---------CGAAAACCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................GTAGAAAAAAAAACTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.008800000
..................................................................................................................................................................................CAAGCGTCGTGT--------------------------------------------CGGCAAAG---TTTT--------------TGCA..............................................................................................................................................................................................................................................2812.002200000
..........................TTCGTGTGTGCAAGTAAAGTAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000002
....GAATTTC-CT-------G--TTTTCGTGTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002002000
..GTGAATTTC-CT-------G--TTTTCGTGTGTGCAAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
.................................GTGCAAGTAAAGTAGAAAAAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000002
...........................TCGTGTGTGCAAGTAAAGTAGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...............................GTGTGCAAGTAAAGTAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
............CT-------G--TTTTCGTGTGTGCAAGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.........................TTTCGTGTGTGCAAGTAAAGTAGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.........................TTTCGTGTGTGCAAGTAAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....AATTTC-CT-------G--TTTTCGTGTGTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
......ATTTC-CT-------G--TTTTCGTGTGTGCAAGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................G--TTTTCGTGTGTGCAAGTAAAGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
................................TGTGCAAGTAAAGTAGAAAAAAAAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
......ATTTC-CT-------G--TTTTCGTGTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................TTCGTGTGTGCAAGTAAAGTAGAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.............................................................................................................................................................................................................................................................................................................................GCCAA--------------------GAAACTAGA-G-AAAAGT.................................................................................................................................................2111.001001000
......ATTTC-CT-------G--TTTTCGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....GAATTTC-CT-------G--TTTTCGTGTGTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.....................G--TTTTCGTGTGTGCAAGTAAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....GAATTTC-CT-------G--TTTTCGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
....GAATTTC-CT-------G--TTTTCGTGTGTGCAAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................G--TTTTCGTGTGTGCAAGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droAna3
TTGTGAATTTT-TT-------CCTTTGTCGCGTGTGAAAAAAAAAAACTA---AAAACTCAATATGGTAAGTTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....GAATTTT-TT-------CCTTTGTCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002010010
........TTT-TT-------CCTTTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002011000
.....AATTTT-TT-------CCTTTGTCGCGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
.....AATTTT-TT-------CCTTTGTCGCGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.....AATTTT-TT-------CCTTTGTCGCGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...TGAATTTT-TT-------CCTTTGTCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..........T-TT-------CCTTTGTCGCGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....GAATTTT-TT-------CCTTTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.....................CCTTTGTCGCGTGTGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
......ATTTT-TT-------CCTTTGTCGCGTGTGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
..........T-TT-------CCTTTGTCGCGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..GTGAATTTT-TT-------CCTTTGTCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....GAATTTT-TT-------CCTTTGTCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
....GAATTTT-TT-------CCTTTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.........TT-TT-------CCTTTGTCGCGTGTGAAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.........TT-TT-------CCTTTGTCGCGTGTGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........TTT-TT-------CCTTTGTCGCGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
.......TTTT-TT-------CCTTTGTCGCGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
............TT-------CCTTTGTCGCGTGTGAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......ATTTT-TT-------CCTTTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........T-TT-------CCTTTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
......ATTTT-TT-------CCTTTGTCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droBip1
-TGTGAACTTT-T-----------TTGTCGCGTGTGAAAAAAAACTACTA---AAAACTCAATATGGTAAGTTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
-TGTGAATTTT-CC----------TTGTCGCGTGTGAACAAAA---ACTA---AAAACTCAATATGGTGAGTAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTGTGAATTTT-C-----------TTGTCGCGTGTGAAAAACC-CCACTA---AACACTCAATATGGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCAAAGA---------------------------------AACA--CAAA---ATAAATCTAAATTATAAATTATATA---------------CTATATATAAAT------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATTTTATTATTT-------------------------TCCT---------TAAATTTGSizeHit CountTotal NormTotal
No Reads
droRho1
CTGTGAATTTT-CC----------TTGTCGCGTGTGAAAAACCTCTAATA---AACTCTCAATATGGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CTGTGAATTTT-CC----------TTGTCGCGTGTGAAAAAC--CCACTA---AAAACTCAATATGGTGAGTACAT-------T----------TCTGTGAACATTT-GTAGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGTACAACTAATCA----------TAAAAATGTTTTAAAAAAATATATGAATAT-----------------------------------------ATATTTGTGTTT-GAAATA------------------GTTTTCATTTTTAAATATTTTATTGTATTT------------------------------------------------------------------------------------------------------TGAAGAGAACTTCCGA-TTCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTGTGAATTTT-CC----------TTTTCGCGTGTGAAAAACCTCCACTA--AAAAACTCAATATGGTGAGTAAAA-------C--AAATAAATTCTGTGAAAATTACGTAGAATGTATTCGAGAA---------------------------------------------A----------------------AAAATGTATTGGG------------GAA----AGCG-AAGCGTT---TTTTTTTT--------------CGCAATATGGCGGCCGG-TCTTTGCATGT-TTTTC-GAAAAGTGATGACGTCATGTTCC----------TCTTTC----GGA---AGA-G-AAAA----------------CGCCGTGTAAAGCTAGAGGAA----ATAG---GT-----------------GT---------------GTACT------------------------GTAAAATGTATCTAAATTCAAATGCATCAAAATTSizeHit CountTotal NormTotal
No Reads
dm3
CTGTGAATTTT-CC----------TTGTCGCGTGTGAAACACTTCCAATA---AAAACTCAATATGGTGAGTACTT-------TAAAAAAAAATCTAGTGAA-ATAAT----------GCTGAAAA---------------------------------------------GAAATT-T-------GTGTGGGCAAAATTCAATGGG------------CAAAA-ACGCG-ATGCGGC---T---TTTT--------------CTCAAAATGGCGGCCGG-CCTGCGTT--TTTTCCT-CAAAAGTGATGACGTCATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............C----------TTGTCGCGTGTGAAACACTTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23121.002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000111104000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000100000000000000000
..........T-CC----------TTGTCGCGTGTGAAACACTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................27115.00150000000000000000000000000000000000000000000000000000000000000000000000000000031320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000300000
............CC----------TTGTCGCGTGTGAAACACTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000500000
......ATTTT-CC----------TTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000100000000000000000000000000000000020000000000000000100000000000010000000000000101000100000000
.............C----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000002000000000001100000000000102000
........TTT-CC----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000110000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000
....GAATTTT-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTT-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000002000000000000010000110000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000100000
......ATTTT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2019.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100000010000000000000000002100000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000
.........TT-CC----------TTGTCGCGTGTGAAACACTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2818.0080000000000000000000000000000000000000000000000000000000000000000000000000000010210000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.........TT-CC----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2018.0080000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000001100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000
....GAATTTT-CC----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000200000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............C----------TTGTCGCGTGTGAAACACTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TT-CC----------TTGTCGCGTGTGAAACACTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000100000000000000000000000000000000000000000000000000000000000000000000100010010000000000000000000000000000
..........T-CC----------TTGTCGCGTGTGAAACACTTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000101000000000000000000000000000000010000000000000000000000000100000
..GTGAATTTT-CC----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000
..........T-CC----------TTGTCGCGTGTGAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2016.0060000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
....GAATTTT-CC----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2016.0060000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000011000000000000000000010000000
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.....................................................................................................................................................................................................................................................................................CGG-CCTGCGTT--TTTTCCT-CA............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTT-CC----------TTGTCGCGTGTGAAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................GCTGAAAA---------------------------------------------GAAATT-T-------GTGTGGG........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........TTT-CC----------TTGTCGCGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........T-CC----------TTGTCGCGTGTGAAACACTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGTGAATTTT-CC----------TTGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................GTCGCGTGTGAAACACTTCCAATA---AAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGAATTTT-CC----------TTGTCGCGTGTGAAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................TGTCGCGTGTGAAACACTTCCAATA---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................ATT-T-------GTGTGGGCAAAATTCAA..............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................GC---T---TTTT--------------CTCAAAATGGCGGC....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................CCT-CAAAAGTGATGACGTCAT............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................................................................................................................................................................................CCGG-CCTGCGTT--TTTTCCT-CAA...........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ATTCAATGGG------------CAAAA-ACG.....................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TT-CC----------TTGTCGCGTGTGAAACACTTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........TT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCGCGTGTGAAACACTTCCAATA---AAAACTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATGGTGAGTACTT-------TAAAAAAAAATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................TGAAAA---------------------------------------------GAAATT-T-------GTGTGGGC.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...TGAATTTT-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................AA-ATAAT----------GCTGAAAA---------------------------------------------GAAATT-T-------GT.............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTT-CC----------TTGTCGCGTGTGAAACACTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGAATTTT-CC----------TTGTCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........T-CC----------TTGTCGCGTGTGAAACACTTCCAATA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGAATTTT-CC----------TTGTCGCGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................TGTCGCGTGTGAAACACTTCCAATA---AAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TGGG------------CAAAA-ACGCG-ATGCGGC---........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................G------------CAAAA-ACGCG-ATGCGGC---T---TTTT--------------CT................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CTTCCAATA---AAAACTCAATATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CC----------TTGTCGCGTGTGAAACACTTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................ACACTTCCAATA---AAAACTCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AATA---AAAACTCAATATGGTGAGTACTT-------T.....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTGAATTTT-CC----------TTGTCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTT-CC----------TTGTCGCGTGTGAAACACTTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................GCGTGTGAAACACTTCCAATA---AA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TGCGTT--TTTTCCT-CAAAAGTGATGA..................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTT-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................TTGTCGCGTGTGAAACACTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
........................TTGTCGCGTGTGAAACACTTCCAATA---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................GG------------CAAAA-ACGCG-ATGCGGC---T---T...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................ATGGG------------CAAAA-ACGCG-ATGCG.............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....AATTTT-CC----------TTGTCGCGTGTGAAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................T----------GCTGAAAA---------------------------------------------GAAATT-T-------GTGTG..........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................AT----------GCTGAAAA---------------------------------------------GAAATT-T-------GTGTGG.........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CCTGCGTT--TTTTCCT-CAAAAGTG......................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TGTGGGCAAAATTCAATGGG------------C.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................AATCTAGTGAA-ATAAT----------GCT................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
droSim2
CTGTGAATTTT-CC----------TTGTCGCGTGTGAAACACTTCCAATA---AAAACTCAATATGGTGAGTACTA-------A-AAAAAAAATCTAGTGAA-ATAAT----------TTCGAAAA---------------------------------------------TAAATT-T-------GTGGGGGCAAAATTCAATGGG------------CAAAA-ACTCG-ACGCGGC---T---TTTT--------------CTCAAAATGGCGGCCGG-CCTGCGTT--TTTTCTT-CAAAAGTGATGACGTCATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....AATTTT-CC----------TTGTCGCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00410300000000000000
.......TTTT-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00400000020110000000
.........TT-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00300100001010000000
.....................................................................................................................................................................................................ATTCAATGGG------------CAAAA-ACT.....................................................................................................................................................................................................................................................................................1813.00312000000000000000
..........T-CC----------TTGTCGCGTGTGAAACACTTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000021000000000
....GAATTTT-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.00300000000300000000
CTGTGAATTTT-CC----------TTGTCGCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00300300000000000000
..........T-CC----------TTGTCGCGTGTGAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300200001000000000
.........TT-CC----------TTGTCGCGTGTGAAACACTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300010002000000000
......ATTTT-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00220000000000000000
....GAATTTT-CC----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200010010000000000
.....AATTTT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200001010000000000
.......................................CACTTCCAATA---AAAACTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
..........T-CC----------TTGTCGCGTGTGAAACACTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200001010000000000
..........T-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00220000000000000000
.................................................................................................................................................................................................................................ACTCG-ACGCGGC---T---TTTT--------------CTC...............................................................................................................................................................................................................................................2012.00200200000000000000
.....................................................................................................................................................................................................ATTCAATGGG------------CAAAA-ACTCG-A.................................................................................................................................................................................................................................................................................2112.00211000000000000000
.......TTTT-CC----------TTGTCGCGTGTGAAACACTTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200200000000000000
....GAATTTT-CC----------TTGTCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200010000000100000
......................................................................................................................................................................................................TTCAATGGG------------CAAAA-ACTC....................................................................................................................................................................................................................................................................................1811.00101000000000000000
........................TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000010000000000
....................................AAACACTTCCAATA---AAAACTCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.......................................CACTTCCAATA---AAAACTCAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000100000000
........................TTGTCGCGTGTGAAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
......................................................................................................................................................................................................................................................TTT--------------CTCAAAATGGCGGCCGG-C...............................................................................................................................................................................................................................2111.00100000010000000000
.........TT-CC----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
......ATTTT-CC----------TTGTCGCGTGTGAAACACTTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000000000
.....................................................................................................................................................................................................ATTCAATGGG------------CAAAA-ACTC....................................................................................................................................................................................................................................................................................1911.00110000000000000000
.........................................................................................................................................................................................................AATGGG------------CAAAA-ACTCG-ACGCGGC---T---TTTT--------------C.................................................................................................................................................................................................................................................2911.00100100000000000000
.....................................AACACTTCCAATA---AAAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
........TTT-CC----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.TGTGAATTTT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
.........................................CTTCCAATA---AAAACTCAATATGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
............CC----------TTGTCGCGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000010000000000
..GTGAATTTT-CC----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
...TGAATTTT-CC----------TTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
..............................................................................................................................................................................................GGGCAAAATTCAATGGG------------CAAAA-ACTC....................................................................................................................................................................................................................................................................................2611.00101000000000000000
............CC----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
........................TTGTCGCGTGTGAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000001000000000
...TGAATTTT-CC----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
...........................TCGCGTGTGAAACACTTCCAATA---AAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000001000000
.........TT-CC----------TTGTCGCGTGTGAAACACTTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..........................GTCGCGTGTGAAACACTTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...TGAATTTT-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
.........................TGTCGCGTGTGAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000010000000000
................................TGTGAAACACTTCCAATA---AAAACTCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.........................................................................................................................................................................................................AATGGG------------CAAAA-ACTCG-AC................................................................................................................................................................................................................................................................................1811.00100100000000000000
......ATTTT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...........................TCGCGTGTGAAACACTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
........TTT-CC----------TTGTCGCGTGTGAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000100000000
......................................................................................................................................................................................................................................................TTT--------------CTCAAAATGGCGGCCGG-CCTG............................................................................................................................................................................................................................2411.00110000000000000000
CTGTGAATTTT-CC----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
...........................................TCCAATA---AAAACTCAATATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
........TTT-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.......TTTT-CC----------TTGTCGCGTGTGAAACACTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
........TTT-CC----------TTGTCGCGTGTGAAACACTTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
............CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.TGTGAATTTT-CC----------TTGTCGCGTGTGAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000100000000
CTGTGAATTTT-CC----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
.........TT-CC----------TTGTCGCGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.TGTGAATTTT-CC----------TTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
..GTGAATTTT-CC----------TTGTCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...TGAATTTT-CC----------TTGTCGCGTGTGAAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.........TT-CC----------TTGTCGCGTGTGAAACACTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000001000000
.........TT-CC----------TTGTCGCGTGTGAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
........TTT-CC----------TTGTCGCGTGTGAAACACTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.........................................CTTCCAATA---AAAACTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
........................TTGTCGCGTGTGAAACAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.08100000000001000000
..............................................AATA---AAAACTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100000000000000
droSec2
CTGTGAATTTT-CC----------TTGTCGCGTGTGAAACACTTCCAATA---AAAACTCAATATGGTGAGTACTA-------A--AAAAAAATCTAGTGAA-ATAAT----------TTCGAAAA---------------------------------------------AAAATTTT-------GTGGGGGCAAAATTCAATGAG------------CAAAA-ACTCG-ACGCGGC---T---TTTT--------------CTCAAAATGGCGGCCGG-CCTGCGTT--TTTTCTT-CAAAAGTGATGACGTCATGCCGATTTTTTTTTTTTGTTC----GCAATGAGA-G-AAAT----------------GGCTCTTAAAATCTAGATCAA----AAAGAAT---------------------------------------------------------------------------------T---------TCAATTATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....GAATTTT-CC----------TTGTCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050050
....GAATTTT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030021
......ATTTT-CC----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030030
........TTT-CC----------TTGTCGCGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030030
CTGTGAATTTT-CC----------TTGTCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0021010
........TTT-CC----------TTGTCGCGTGTGAAACACTTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0021010
.......TTTT-CC----------TTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
........TTT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
.......................................................................................................................................................................................................................................................................CTCAAAATGGCGGCCGG-CCTGC...........................................................................................................................................................................................................................2212.0020002
......ATTTT-CC----------TTGTCGCGTGTGAAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
................................................................................................................................................................................................................................................................................................T--TTTTCTT-CAAAAGTGATGACGTC..............................................................................................................................................................................................2411.0010100
............................................CCAATA---AAAACTCAATATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.....................................AACACTTCCAATA---AAAACTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000
CTGTGAATTTT-CC----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
..............................................................................................................................................................................................................................................................................................................................................GTTC----GCAATGAGA-G-AAAT----------------G..................................................................................................................................1911.0010100
....GAATTTT-CC----------TTGTCGCGTGTGAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
............................CGCGTGTGAAACACTTCCAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
CTGTGAATTTT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.........................TGTCGCGTGTGAAACACTTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.....AATTTT-CC----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...........................................................................................................................................................................................................TGAG------------CAAAA-ACTCG-ACGCGGC---........................................................................................................................................................................................................................................................................2111.0011000
.....AATTTT-CC----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........TT-CC----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..........................GTCGCGTGTGAAACACTTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
......................................ACACTTCCAATA---AAAACTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
............CC----------TTGTCGCGTGTGAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
......ATTTT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
........TTT-CC----------TTGTCGCGTGTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........TT-CC----------TTGTCGCGTGTGAAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
......ATTTT-CC----------TTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
......................................................................................................................................................................................................................................................TTT--------------CTCAAAATGGCGGCCGG-C...............................................................................................................................................................................................................................2111.0010001
.........................TGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
......ATTTT-CC----------TTGTCGCGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
....GAATTTT-CC----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
........TTT-CC----------TTGTCGCGTGTGAAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
........TTT-CC----------TTGTCGCGTGTGAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
droYak3
CTGTGAATTTT-CC----------TTGTCGCGTGTGAAACACCTCCATT----AAAACTCAATATGGTGAGTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................TGAAACACCTCCATT----AAAACTCAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2622.50504100000000
............CC----------TTGTCGCGTGTGAAACACCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2422.00400300100000
....GAATTTT-CC----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.50301000020000
..........................GTCGCGTGTGAAACACCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.00201100000000
.....AATTTT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.00200000020000
....GAATTTT-CC----------TTGTCGCGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.00200100100000
......ATTTT-CC----------TTGTCGCGTGTGAAACACCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2921.00200100010000
.........TT-CC----------TTGTCGCGTGTGAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.00201100000000
..................................TGAAACACCTCCATT----AAAACTCAATATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2821.00201100000000
........................TTGTCGCGTGTGAAACACCTCCATT----A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50101000000000
...............................GTGTGAAACACCTCCATT----AA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000000000
......ATTTT-CC----------TTGTCGCGTGTGAAACACCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000010000
......ATTTT-CC----------TTGTCGCGTGTGAAACACCTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................3020.50100000010000
............CC----------TTGTCGCGTGTGAAACACCTCCATT----....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000010000
.....................................AACACCTCCATT----AAAACTCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000000000
........TTT-CC----------TTGTCGCGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100100000000
..........................GTCGCGTGTGAAACACCTCCATT----....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50110000000000
.......TTTT-CC----------TTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100100000000
......ATTTT-CC----------TTGTCGCGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100100000000
.TGTGAATTTT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101000000000
..........................GTCGCGTGTGAAACACCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101000000000
.....AATTTT-CC----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100100000000
......ATTTT-CC----------TTGTCGCGTGTGAAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100100000000
..........................GTCGCGTGTGAAACACCTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000100000
....GAATTTT-CC----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100001000000
...................................GAAACACCTCCATT----AAAACTCAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101000000000
.............C----------TTGTCGCGTGTGAAACACCTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000000000
............CC----------TTGTCGCGTGTGAAACACCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50101000000000
........................TTGTCGCGTGTGAAACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100100000000
........................TTGTCGCGTGTGAAACACCTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50101000000000
............................CGCGTGTGAAACACCTCCATT----AAAACTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50101000000000
............CC----------TTGTCGCGTGTGAAACACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50101000000000
......................................ACACCTCCATT----AAAACTCAATATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101000000000
.............C----------TTGTCGCGTGTGAAACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100100000000
....GAATTTT-CC----------TTGTCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100010000000
....GAATTTT-CC----------TTGTCGCGTGTGAAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50101000000000
............CC----------TTGTCGCGTGTGAAACACCTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100100000000
..GTGAATTTT-CC----------TTGTCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100100000000
............................................CCATT----AAAACTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.14101000000000
.............................................CATT----AAAACTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000
droEre2
CTGTGAATTTT-CA----------TTGTCGCGTGTGAAACACCTCCACTA---AAAACTCAATATGGTAAGTAGTT-------C--AA-AAAATATAGTAAA-ATAAT----------ATAGAGAA---------------------------------------------AAAATT-G-------GTGC-GGCAAAATTCAATGGG------------CAA---ACGCG-ACGCGGC---T---TTTT--------------TTCAAAATGGCGGCCGG-CAAGCGTT--T-TTCTC-GAAAAGTGATGACGTCATGCCTT--AC------ATTTTTATATGAAAAGAGAAGAATAAGATGATCGATGGGAGA--------------------AAAAT-------GCAAGAAATATTGCTATGCCGGCGAAACGCTTCTGCGATAACTTATTTTCTTA-------------------------ATTT---------ACAAAATTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....GAATTTT-CA----------TTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030101100
....GAATTTT-CA----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000200
....GAATTTT-CA----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0021000100
........TTT-CA----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020010010
.....................................AACACCTCCACTA---AAAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0021100000
.....................................................................................................................................................................................................ATTCAATGGG------------CAA---ACGCG-ACG...............................................................................................................................................................................................................................................................................2111.0010000100
........TTT-CA----------TTGTCGCGTGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..........T-CA----------TTGTCGCGTGTGAAACACCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
....GAATTTT-CA----------TTGTCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
......ATTTT-CA----------TTGTCGCGTGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
............................CGCGTGTGAAACACCTCCACTA---AAAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
...............................................................................................................................................................................................................................................................................................................................................................AGAATAAGATGATCGATGGGAGA--------------------AAA............................................................................................................2611.0010000100
..GTGAATTTT-CA----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
...............................GTGTGAAACACCTCCACTA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.............A----------TTGTCGCGTGTGAAACACCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
........TTT-CA----------TTGTCGCGTGTGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.TGTGAATTTT-CA----------TTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
......ATTTT-CA----------TTGTCGCGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
CTGTGAATTTT-CA----------TTGTCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
......ATTTT-CA----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
....GAATTTT-CA----------TTGTCGCGTGTGAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
..........................GTCGCGTGTGAAACACCTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
............CA----------TTGTCGCGTGTGAAACACCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
..........................GTCGCGTGTGAAACACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.........................TGTCGCGTGTGAAACACCTCCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.............A----------TTGTCGCGTGTGAAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.....AATTTT-CA----------TTGTCGCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
....................................................................................................................................................................................................AATTCAATGGG------------CAA---ACGCG-A.................................................................................................................................................................................................................................................................................2011.0010000100
.............A----------TTGTCGCGTGTGAAACACCTCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
..GTGAATTTT-CA----------TTGTCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.........................................CCTCCACTA---AAAACTCAATATGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
........................TTGTCGCGTGTGAAACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
...........................................................................................................................................................................................................................................................................................................GAAAAGTGATGACGTCATGCC.........................................................................................................................................................................................2111.0011000000
....GAATTTT-CA----------TTGTCGCGTGTGAAACACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
.........................................CCTCCACTA---AAAACTCAATATTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000

Generated: 05/16/2015 at 09:19 PM