ID:

dvi_17061

 Coordinate:

scaffold_13047:15794328-15794478 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.4 -24.2 -24.0

Flybase annnotation

exon [dvir_GLEANR_9770:7]; CDS [Dvir\GJ24495-cds]; intron [Dvir\GJ24495-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGCACAGGAATAGGTGGCCAGGTGGCCAAGTGAGCTGGCAGGGCTTAGAAGACGTTTAGTATTTCATATTCAGGGATTTGGGGATTCAGTTGACGCTTCAAAGCCAGCTACGCTTTTGATGTAAAAGAAAGTGAAAATGCGGAAAATGCCGTTGCCAGCAAAGTTCAAGTATTTTTACACTGCACTCTTAATAATTAACAGGACCCATGTCTATGAAGGAGGTGGACACACAAATGCTCAACGTGCAGAGT
**************************************************...(((...((((.......(((((.(((((((..((....))..))))))).)).......((((((...))))))...((((((((((.(((..(((........)))...)))..)))))))))).))).......))))...)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060660
Argentina_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 V047
embryo
 V053
head
 SRR060657
140_testes_total
 SRR060682
9x140_0-2h_embryos_total
 V116
male body		 SRR060676
9xArg_ovaries_total
 SRR1106727
larvae
 SRR060661
160x9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
........................................................................................................................................................................................................GGACCCATGTCTATGAAGGAGGT............................ 23 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTTGGGGATTCAGTTGACGCT.......................................................................................................................................................... 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GACCCATGTCTATGAAGGAGGT............................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GACCCATGTCTATGAAGGAGGTG........................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GACACACAAATGCTCAACGAGCAGA.. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTGGACCCATGTCTATGAAGGAGGTGGAC........................ 29 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGTCTATGAAGGAGGTGGAC........................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTATGAAGGAGGTGGACACACAAATGCT............. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GACCCATGTCTATGAAGGAGGTGGACA....................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CATGTCTATGAAGGAGGTG........................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATGAAGGAGGTGGACACACAAAT................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GGACCCATGTCTATGAAGGAGGTG........................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGACACACAAATGCTCAACGTGCAGA.. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GTACCCATGTCTATGAAGGAG.............................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGAACGAGGTGGACACACAAAT................ 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CCCTTGTCTATGAAGGAGGT............................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTATGAAGGAGGTGGACAC...................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTATGAAGGAGGTGGACACACAAA................. 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTGGACCCATGTCTATGAAGGAGGT............................ 25 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................GTGGCCAAGTGAACTGGA.................................................................................................................................................................................................................... 18 2 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
...................................................................................ATTCAGTTGACGATTTAAAG.................................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATGAAGGAGGTGGACGCACA................... 20 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............GACCAGGTGGCCGAGTGA.......................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................TGGCAGGGCTTCGAAGGC...................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......GACGAGGTGGCCAGGTGG.................................................................................................................................................................................................................................. 18 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TGAAGTAATATAAAGTGAAAA.................................................................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................TCAAAGAACGCTACGCTTT....................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CCGTGTCCTTATCCACCGGTCCACCGGTTCACTCGACCGTCCCGAATCTTCTGCAAATCATAAAGTATAAGTCCCTAAACCCCTAAGTCAACTGCGAAGTTTCGGTCGATGCGAAAACTACATTTTCTTTCACTTTTACGCCTTTTACGGCAACGGTCGTTTCAAGTTCATAAAAATGTGACGTGAGAATTATTAATTGTCCTGGGTACAGATACTTCCTCCACCTGTGTGTTTACGAGTTGCACGTCTCA
**************************************************...(((...((((.......(((((.(((((((..((....))..))))))).)).......((((((...))))))...((((((((((.(((..(((........)))...)))..)))))))))).))).......))))...)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060676
9xArg_ovaries_total
 V116
male body		 SRR060663
160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 GSM1528803
follicle cells		 SRR060668
160x9_males_carcasses_total
 SRR060657
140_testes_total
.................................................................................................AGTTTCGGTCGATGCGAAAACTACAT................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................ACGCCTTTTACGGCAACGGTCGTTT......................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................TCGGTCGATGCGAAAACTACA................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................GATACTTCATGCAGCTGTG...................... 19 3 6 0.17 1 0 0 0 0 1 0 0 0
................................................................................................................................................................TTCAAGTGCATGAAAAAGTG....................................................................... 20 3 15 0.13 2 0 0 0 1 0 0 1 0
.............................................................................................................................................................................AAATGTGACGTGGCAATTAAT......................................................... 21 3 10 0.10 1 0 0 0 1 0 0 0 0
................................................................GTCTAAGTGCCTAAACGCCT....................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 1 0 0
...................................................................TAAGTCCCTACACCACTTA..................................................................................................................................................................... 19 3 18 0.06 1 1 0 0 0 0 0 0 0
............................................................................................TGCGAAGTTTCGGAGGGTG............................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:15794278-15794528 + dvi_17061 GGCACAG---------------------------------------------------GAATAGGTGGCCAGGT----GGCCAAGTGAGCT----GGCAGGGCTT---AGAAGACG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCAGTT--------GACGCTTCAAAGC----CAGCTACGCTTTTGATGTAAAAGAAAGTGAAAATG----------CGGA-----AAATG------------------CC-------GT--TG-------CC---------------------------------A-G----CA----------------------------------------------------------------------------------------AAGTTCAAGTATTT---TT-----ACA---CTGC--ACTCTTAATAATTAACAGGACCCATGTCTATGAAGGAGGTGGACACACAAATGCTCAACGTGCAGAGT
droMoj3 scaffold_6540:19305388-19305682 + GACACAAGCAGAAGCTGAATGAGAAGTAGCAGCAGCAGGAGCGGTAGGAGCAGCACAAGC---ATAGCCCAGGT----GGCCAAGTGCGCT----GTCAGGGCTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTTACTT--------GACGCATCAAAGC----CATCTTGGCTTTTGATGTGA------------AAG----------AAAGCGGAAAAATG------------------CT-------GC--CA-------CC---------------------------------A--GAAGCA----------------------------------------------------------------------------------------GAGTTCAAGTATTT---TT-----ACG---CTGC--ACTCTTAATAATTAACAGGCCCCATGTCCATGAAGGAGGTGGACACACAGATGTTCAACGTGCAGAGC
droGri2 scaffold_14830:4219629-4219937 - AACACAG---------------------------------------------------CC---ATGGCCCAGGT----GGCCAAGTGCGCT----GGCAGGGCTT---AGAAGGCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTTCACT----T---GACGCATCAAAGCCCAACAACTTGGCTTTTGATGTGAG-----------AAGCG-------------AGAAAG---------------------------------------------CGGAAA------------------------------TAAAAA---------------------CTAATGCTGCTGATGCCTTTTTTTGTTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTATAAGTAGAGTAAAAGTATTTA--TAT--AT------GTGC--ACTTTTAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACACAGATGCTCAACGTGCAGAGC
droWil2 scf2_1100000004921:990262-990542 - dwi_2971 -------------------------------------------------------------------TCCAGGT----GGCAAAGTGCGCT---TGTTTGGGCTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGGGGATTGGGGATTTCTGT----TT--GGCTCATCAAAGT----CAACTTGCCTTTTGATGTAT------------ATA----------AATACAAT-AGCTTCTGGGGTGGATGGAGACTCTAAGAAAG---------------CATAA---------------------------GC-AA-AACATTTCTTCCTTCCGTAAAAAAAAAAT-------------------------------------------------------------------------CTGTT--TTT--C-------TTGT--CTCTGCCATAATTAACAGGACCCATGTCCATGAAGGAAGTGGACACACAAATGCTCAATGTCCAGAGC
dp5 2:8296205-8296494 + AACTCCG---------------------------------------------------AC---TCCGACCAGGT----GGCAAAGTGCGCT----GTTGGGGCTT---AGAATCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTTGCTT----TTGGGACGCATCAAAGC----CAACTTGTCTTTTGATGTAA------------ATGCGGGACAATGCGGGAGGGAGCACT------------------GC-------A------------------------CTGTTTTGGTAGAGATACTGAGGC-GATGGGATTTTTTACCCCCGATACC-AATCAT-----TTTT-G-----------------------------------------------------------------TT--TTT-----------TGTTGTTGTTC---AATTAACAGGTCCTATGTCCATGAAGGAGGTGGACACCCAAATGCTCAATGTGCAGGCG
droPer2 scaffold_0:2132017-2132291 + AACTCCG---------------------------------------------------AC---TCCGACCAGGT----GGCAAAGTGCGCT----GTTGGGGCTT---AGAATCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTTGCTT----TTGGGACGCATCAAAGC----CAACTTGTCTTTTGATGTAA------------ATG----------CGGGAGGGGAGCA------------------------------------------------CTGCACTGTTTTGGTGGAGATACTGAGGC-GATGGGATTT-TTACCCCCGATACC-AATCGT-----TT--------------------------------------------------------------------TTT--TTTT--G------------TTGTTC---AATTAACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAAATGCTCAATGTGCAGGCG
droAna3 scaffold_13340:21931195-21931435 - G-----------------------------------------------------------------GCCCAGGT----GGCAAGGTGCGCT----GCGAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGG-------GGATTCTGCT--------GGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATA----------CGC--AGAAAGTTT------------------CC-------GG--CCCC---TACC---------------------------------T-GGAGGCA------------------------T-----TTGTTTTT--------------------------------------------------------------TTT--TTTTA--ACGCTAACGC--TTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTTAACGTGCAGAGC
droBip1 scf7180000396583:256337-256578 + GCTGT-----------------------------------------------------------TGGCCCAGGT----GGCAAGGTGCGCT----GCGAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGG-------GGATTCGGCT--------GGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATA----------CGC--TGAAAGTTT------------------CC-------GG--CCCG---GGTC---------------------------------T-CGAGGCA------------------------T-----TC-----T--------------------------------------------------------------TTT--TTTTA--ACGCTAACGC--TTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTTAACGTGCAGAGC
droKik1 scf7180000302475:1030191-1030423 + GGAACGG---------------G----------------------------------AAC---GCAGCCCAGGT----GGCAAGGTGCGCT----GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TTG-------GGATT---------------CGCATCAAAGC----GAACTTGGCTTTTGATGTACA--------TAAATG----------CGC--AGGAAGTTT------------------CC-------GC--CG-----CGCC---------------------------------C-AAAGGCA------------------------T---------------------------------------------------------------------------TTT--TTT--C-------ACGC--TCACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGC
droFic1 scf7180000453826:144186-144414 + G--------------------------------------------------------------------CAGGT----GGCAAGGTGCGCG----GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTGCGCT--------GGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATGCG--------AGCACCGGAAGTTT------------------CC-------TG--CTC----CGAC---------------------------------T-AGAGGCA------------------------T---------------------------------------------------------------------------TT---TTTTA--AC----ACGCCCCCACTCAATAATTAACAGGACCAATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGC
droEle1 scf7180000491280:4237505-4237728 + CAA----------------------------------------------------------------GCCAGGT----G---AGGTGCTCCAGGAGCCAAAACTTGGTGGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCT--------TGCGCATCAAACG---GAAACTTGTCTTTTGATGTAA------------ATGCGG-------GCCACAGCAAA---------------------------------------------------------------------------------AGGGCA------------------------C-----T---------------------------------------------------------------------TTT--TTTT-AA------AGGTTTTCACTCAATAATTCACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGC
droRho1 scf7180000779538:470989-471217 + G------------------------------------------------------------------GCCAGGT----GGCAAGGTGCGCC---AGCCAGGACTT---AGAAACCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCT--------GGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATG----------CGCTCAAGAAGTTT------------------CC-------GG--CGCT---CGCC---------------------------------C-TAAGGCA------------------------C---------------------------------------------------------------------------TTT--TTTT-AA------AGGT--TCGCTCAATAATTAACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAGATGCTAAACGTGCAGAGC
droBia1 scf7180000302075:3024632-3024859 + A-----------------------------------------------------------------GCCCAGGTGG-TGGCAAGGTGCACG---GGCCAGGACTT---AGAAGCCGTGTTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCC--------GACGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATG----------CGCACAGGAAGTTT-T----------------CC-------GG--CA-------------------------------------------------CA------------------------C-----T---------------------------------------------------------------------TTT--TTTT---ACA---ACGTTCTTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACGCAGATGCTGAATGTGCAGAGC
droTak1 scf7180000414170:17402-17619 - C--------------------------------------------------------------CCAGCCCAGGT----GCACAGGCACAGT----TACAGGACTT---GGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGG-------GGATTCCGCC--------GACGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATG----------CGCACAGGAAGTT------------------------------------------------------------------------------GA-----------------------------T----------GTT--------------------------------------------------------------TTT--TTTT--A------ACGCTCTCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTTCAATGTGCAGAGC
droEug1 scf7180000409787:1816365-1816590 + A-----------------------------------------------------------------GCCCAGGT----GCCAAGGTGCACA----GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCC--------TGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ACG----------CGCACAGGAAGATT------------------CC-------GG--CTCT---CGCC---------------------------------T-GAAGATA------------------------T---------------------------------------------------------------------------T----TTTT--A------ACGC--TCACTTAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGCTCAATGTGCAGAGC
dm3 chr3R:23793264-23793498 - C---------------------------------------------------------------CAGTGCAGGTGCCCGGCCAGGTGCGCA----GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCC--------GGCGCATCAAAGC----GAACTTGTCTTTTGATGTAAA----TGTTTAAATG----------CGCACAGGAAGATT------------------GT-------A-----------------------------------------------C-GAAGGCA------------------------A---------------------------------------------------------------------------TTTTGTTT--CA------ACGC--TCTCTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGC
droSim2 3r:23192465-23192705 - dsi_17688 CGAGCTG----------A----G----------------------------------A---TCCCAGTGCAGGT----GGCCAGGTGCGCA----GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGGC--------GGCGCATCAAAGC----GAACTTGCCTTTTGATGTAAA----TGTGTAAATG----------CGCACAGGAAGATT------------------CC-------A-----------------------------------------------C-GAAGGCA------------------------T---------------------------------------------------------------------------TTT--TTT--CA------ACGC--TCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGC
droSec2 scaffold_22:415826-416066 - CGAGCTG----------A----G----------------------------------A---TCCCAGTGCAGGT----GGCCAGGTGCGCA----GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGGC--------GGCGCATCAAAGC----GAACTTGCCTTTTGATGTAAA----TGTGTAAATG----------CGCACAGGAAGATT------------------CC-------A-----------------------------------------------C-GAAGGCA------------------------T---------------------------------------------------------------------------TTT--TTT--GA------ACGC--TCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGC
droYak3 3R:22706638-22706882 + A-----------------------------------------------------------------GTGCAGGT----GGCCAGGTGCGCA----GTCAGGACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCCGATTCCGGGGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA------------ATG----------CGCACCGGAAGAAT------------------CC-------GTCGCTCCTCGCATC---------------------------------TCGAAGGCA------------------------T---------------------------------------------------------------------------CTT--TTTTA--ACA---ACGC--TTACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGTACAACGTGCAGAGC
droEre2 scaffold_4820:4251702-4251929 + A-----------------------------------------------------------------GTGCAGGT----GGCCAGGTGCGCA----GGCAGGACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCC--------GGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA------------ATG----------CGCACAGGAAGGAA------------------CT-------GT--CGCT---CGCC---------------------------------C-GAAGGCA------------------------T---------------------------------------------------------------------------CTT--TTTT--A------ACGC--TTGCTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGTACAACGTGCAGAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GGCACAG---------------------------------------------------GAATAGGTGGCCAGGT----GGCCAAGTGAGCT----GGCAGGGCTT---AGAAGACG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCAGTT--------GACGCTTCAAAGC----CAGCTACGCTTTTGATGTAAAAGAAAGTGAAAATG----------CGGA-----AAATG------------------CC-------GT--TG-------CC---------------------------------A-G----CA----------------------------------------------------------------------------------------AAGTTCAAGTATTT---TT-----ACA---CTGC--ACTCTTAATAATTAACAGGACCCATGTCTATGAAGGAGGTGGACACACAAATGCTCAACGTGCAGAGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCCATGTCTATGAAGGAGGT............................2312.002000000000000002000000000000000000000000000000000000000000000000
............................................................................................................................................TT-TGG-------GGATTCAGTT--------GACGCT..........................................................................................................................................................................................................................................................................................................................................................2112.002000000000020000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCTATGAAGGAGGT............................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCTATGAAGGAGGTG...........................2311.001000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTATGAAGGAGGTGGAC........................2011.001000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAAGGAGGTGGACACACAAATGCT.............2811.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCTATGAAGGAGGTGGACA.......................2711.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCTATGAAGGAGGTG...........................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACACAAAT................2311.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCCATGTCTATGAAGGAGGTG...........................2411.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACACAAATGCTCAACGTGCAGA..2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAAGGAGGTGGACAC......................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAAGGAGGTGGACACACAAA.................2411.001000000000000000010000000000000000000000000000000000000000000000
droMoj3
GACACAAGCAGAAGCTGAATGAGAAGTAGCAGCAGCAGGAGCGGTAGGAGCAGCACAAGC---ATAGCCCAGGT----GGCCAAGTGCGCT----GTCAGGGCTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTTACTT--------GACGCATCAAAGC----CATCTTGGCTTTTGATGTGA------------AAG----------AAAGCGGAAAAATG------------------CT-------GC--CA-------CC---------------------------------A--GAAGCA----------------------------------------------------------------------------------------GAGTTCAAGTATTT---TT-----ACG---CTGC--ACTCTTAATAATTAACAGGCCCCATGTCCATGAAGGAGGTGGACACACAGATGTTCAACGTGCAGAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--ACTCTTAATAATTAACAG..................................................2011.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACACAGATGTTCAACGTGCAGAGC2711.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACACAGAT................2311.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAGGT............................2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACACAGATGTTCAACGTGCAGA..2611.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACACAGA.................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGGACACACAGATGTT.............2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGATGTTCAACGTGCAGAGC2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCATGAAGGAGGTGGACA.......................2111.001001000
...................................CAGGAGCGGTAGGAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATGTTCAACGTGCAGAGC2211.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGATGTTCAACGTGCAGAGC2311.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACACACAGATGTTCAACGTGCAGAG.2811.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGTG...........................1930.331100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGG..........................1930.331100000
droGri2
AACACAG---------------------------------------------------CC---ATGGCCCAGGT----GGCCAAGTGCGCT----GGCAGGGCTT---AGAAGGCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTTCACT----T---GACGCATCAAAGCCCAACAACTTGGCTTTTGATGTGAG-----------AAGCG-------------AGAAAG---------------------------------------------CGGAAA------------------------------TAAAAA---------------------CTAATGCTGCTGATGCCTTTTTTTGTTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTATAAGTAGAGTAAAAGTATTTA--TAT--AT------GTGC--ACTTTTAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACACAGATGCTCAACGTGCAGAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
-------------------------------------------------------------------TCCAGGT----GGCAAAGTGCGCT---TGTTTGGGCTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGGGGATTGGGGATTTCTGT----TT--GGCTCATCAAAGT----CAACTTGCCTTTTGATGTAT------------ATA----------AATACAAT-AGCTTCTGGGGTGGATGGAGACTCTAAGAAAG---------------CATAA---------------------------GC-AA-AACATTTCTTCCTTCCGTAAAAAAAAAAT-------------------------------------------------------------------------CTGTT--TTT--C-------TTGT--CTCTGCCATAATTAACAGGACCCATGTCCATGAAGGAAGTGGACACACAAATGCTCAATGTCCAGAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCATGTCCATGAAGGAA..............................1913.00300030
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAA..............................2013.00300120
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAAGTGGAC........................2612.00201010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAAGTGGACACACAAATGCTCA...........2711.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAAATGCTCAATGTCCAGA..2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAAGTGG..........................1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAA..............................1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAAGTGGAC........................2211.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCCATGTCCATGAAGGAAGTGGAC........................2711.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGCTCAATGTCCAGA..1911.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAAATGCTCAATGTCCAGAGC2411.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAAATGCTCAATGTCC.....1911.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGG................................1811.00100010
.......................................................................................................................................................................................................................................................................................................................................AACATTTCTTCCTTCCGT..................................................................................................................................................................................1811.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAAGT............................2011.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAAGTGGA.........................2311.00100010
..............................................................................................................................................................................................................AT------------ATA----------AATACAAT-AGCTTCTGG................................................................................................................................................................................................................................................................................2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAAGTGGA.........................2011.00100010
dp5
AACTCCG---------------------------------------------------AC---TCCGACCAGGT----GGCAAAGTGCGCT----GTTGGGGCTT---AGAATCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTTGCTT----TTGGGACGCATCAAAGC----CAACTTGTCTTTTGATGTAA------------ATGCGGGACAATGCGGGAGGGAGCACT------------------GC-------A------------------------CTGTTTTGGTAGAGATACTGAGGC-GATGGGATTTTTTACCCCCGATACC-AATCAT-----TTTT-G-----------------------------------------------------------------TT--TTT-----------TGTTGTTGTTC---AATTAACAGGTCCTATGTCCATGAAGGAGGTGGACACCCAAATGCTCAATGTGCAGGCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAAATGCTCAATGTGCAGGC.2412.0020110000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAAATGCTCAATGTGCA....2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAAATGCTCAATGTGCAG...2211.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAAATGCTCAATGTGC.....2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGCTCAATGTGCAGGC.2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGGTGGACACCCAAATGCT.............2411.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCATGAAGGAGGTGGA.........................1920.5010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCATGAAGGAGGTGGA.........................1820.5010100000000
..........................................................................................................................................................................................................................................................................................................................................................................TTT-G-----------------------------------------------------------------TT--TTT-----------TGTTGTTGTT...............................................................1990.1110100000000
droPer2
AACTCCG---------------------------------------------------AC---TCCGACCAGGT----GGCAAAGTGCGCT----GTTGGGGCTT---AGAATCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTTGCTT----TTGGGACGCATCAAAGC----CAACTTGTCTTTTGATGTAA------------ATG----------CGGGAGGGGAGCA------------------------------------------------CTGCACTGTTTTGGTGGAGATACTGAGGC-GATGGGATTT-TTACCCCCGATACC-AATCGT-----TT--------------------------------------------------------------------TTT--TTTT--G------------TTGTTC---AATTAACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAAATGCTCAATGTGCAGGCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCCATGAAGGAGGTGGA.........................2113.003003000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGTCCATGAAGGAGGTGG..........................2211.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCATGAAGGAGGTGGA.........................1830.331010000
droAna3
G-----------------------------------------------------------------GCCCAGGT----GGCAAGGTGCGCT----GCGAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGG-------GGATTCTGCT--------GGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATA----------CGC--AGAAAGTTT------------------CC-------GG--CCCC---TACC---------------------------------T-GGAGGCA------------------------T-----TTGTTTTT--------------------------------------------------------------TTT--TTTTA--ACGCTAACGC--TTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTTAACGTGCAGAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCA...................2012.002110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACC.....................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCC....................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAGGT............................2011.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCAGATGCT.............2611.001010000
............................................................................................................................ATTTCATATTCAGGGATTTTGG-------GGAT..............................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGATGCTTAACGTGCAGAGC2211.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGCTTAACGTGCAGA..1911.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGACACCCAGATGCTT............2011.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACCCAGA.................2311.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCAGAT................2311.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCATGAAGGAGGTGGA.........................1830.331000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGGA.........................2030.331010000
droBip1
GCTGT-----------------------------------------------------------TGGCCCAGGT----GGCAAGGTGCGCT----GCGAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGG-------GGATTCGGCT--------GGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATA----------CGC--TGAAAGTTT------------------CC-------GG--CCCG---GGTC---------------------------------T-CGAGGCA------------------------T-----TC-----T--------------------------------------------------------------TTT--TTTTA--ACGCTAACGC--TTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTTAACGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droKik1
GGAACGG---------------G----------------------------------AAC---GCAGCCCAGGT----GGCAAGGTGCGCT----GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TTG-------GGATT---------------CGCATCAAAGC----GAACTTGGCTTTTGATGTACA--------TAAATG----------CGC--AGGAAGTTT------------------CC-------GC--CG-----CGCC---------------------------------C-AAAGGCA------------------------T---------------------------------------------------------------------------TTT--TTT--C-------ACGC--TCACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droFic1
G--------------------------------------------------------------------CAGGT----GGCAAGGTGCGCG----GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTGCGCT--------GGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATGCG--------AGCACCGGAAGTTT------------------CC-------TG--CTC----CGAC---------------------------------T-AGAGGCA------------------------T---------------------------------------------------------------------------TT---TTTTA--AC----ACGCCCCCACTCAATAATTAACAGGACCAATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droEle1
CAA----------------------------------------------------------------GCCAGGT----G---AGGTGCTCCAGGAGCCAAAACTTGGTGGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCT--------TGCGCATCAAACG---GAAACTTGTCTTTTGATGTAA------------ATGCGG-------GCCACAGCAAA---------------------------------------------------------------------------------AGGGCA------------------------C-----T---------------------------------------------------------------------TTT--TTTT-AA------AGGTTTTCACTCAATAATTCACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droRho1
G------------------------------------------------------------------GCCAGGT----GGCAAGGTGCGCC---AGCCAGGACTT---AGAAACCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCT--------GGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATG----------CGCTCAAGAAGTTT------------------CC-------GG--CGCT---CGCC---------------------------------C-TAAGGCA------------------------C---------------------------------------------------------------------------TTT--TTTT-AA------AGGT--TCGCTCAATAATTAACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAGATGCTAAACGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droBia1
A-----------------------------------------------------------------GCCCAGGTGG-TGGCAAGGTGCACG---GGCCAGGACTT---AGAAGCCGTGTTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCC--------GACGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATG----------CGCACAGGAAGTTT-T----------------CC-------GG--CA-------------------------------------------------CA------------------------C-----T---------------------------------------------------------------------TTT--TTTT---ACA---ACGTTCTTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACGCAGATGCTGAATGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droTak1
C--------------------------------------------------------------CCAGCCCAGGT----GCACAGGCACAGT----TACAGGACTT---GGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGG-------GGATTCCGCC--------GACGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ATG----------CGCACAGGAAGTT------------------------------------------------------------------------------GA-----------------------------T----------GTT--------------------------------------------------------------TTT--TTTT--A------ACGCTCTCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTTCAATGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droEug1
A-----------------------------------------------------------------GCCCAGGT----GCCAAGGTGCACA----GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCC--------TGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA------------ACG----------CGCACAGGAAGATT------------------CC-------GG--CTCT---CGCC---------------------------------T-GAAGATA------------------------T---------------------------------------------------------------------------T----TTTT--A------ACGC--TCACTTAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGCTCAATGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
dm3
C---------------------------------------------------------------CAGTGCAGGTGCCCGGCCAGGTGCGCA----GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCC--------GGCGCATCAAAGC----GAACTTGTCTTTTGATGTAAA----TGTTTAAATG----------CGCACAGGAAGATT------------------GT-------A-----------------------------------------------C-GAAGGCA------------------------A---------------------------------------------------------------------------TTTTGTTT--CA------ACGC--TCTCTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCAGATGTACAACGTGCA....2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGT............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCAGAT................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGGACACGCAGA.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACGC....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGGA.........................2031.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCATGAAGGAGGTGGA.........................1931.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000010000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGTGG..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................AAA----TGTTTAAATG----------CGCACAGG..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAGGTG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCCATGAAGGAGGTG...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCAGATGTACAACGT.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGCAGATGTACAACGTGC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................GTTTAAATG----------CGCACAGGAAGATT------------------GT-------A-----------------------------------------------.........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGACCCATGTCCATGAAGGAGGT............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGTG...........................2311.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGGACA.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGACACGCAGATGTA.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCAGA.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGAAGGAGGTGGACA.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AATG----------CGCACAGGAAGATT------------------G.................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................ATATTCAGGGATT-TGG-------GGATT.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTACAACGTGCAGAGC1911.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGATGTACAACGTGCAGAG.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGGTGGACACGC....................1811.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AATG----------CGCACAGGAAGATT------------------GT-------A-----------------------------------------------C-G......................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTACAACGTGCAGAGG1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGACACGCAGATGTACAACGTG......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGC....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGGACACGCAGC.................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCATGAAGGAGGTGG..........................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTG...........................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGTACAACGTGA.....1730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGTGGAC........................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGAGCTG----------A----G----------------------------------A---TCCCAGTGCAGGT----GGCCAGGTGCGCA----GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGGC--------GGCGCATCAAAGC----GAACTTGCCTTTTGATGTAAA----TGTGTAAATG----------CGCACAGGAAGATT------------------CC-------A-----------------------------------------------C-GAAGGCA------------------------T---------------------------------------------------------------------------TTT--TTT--CA------ACGC--TCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACGC....................2011.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACGCAGATGTACAACGTGCAGAGC2711.00100000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACAC......................1811.00100000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGGACACGCAGATGTACAAC.........2511.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCA...................2011.00100010000000000000
droSec2
CGAGCTG----------A----G----------------------------------A---TCCCAGTGCAGGT----GGCCAGGTGCGCA----GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGGC--------GGCGCATCAAAGC----GAACTTGCCTTTTGATGTAAA----TGTGTAAATG----------CGCACAGGAAGATT------------------CC-------A-----------------------------------------------C-GAAGGCA------------------------T---------------------------------------------------------------------------TTT--TTT--GA------ACGC--TCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACGCAGATGTACAACGTGCAGAGC2712.0020020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCAG..................2112.0021100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCATGTCCATGAAGGAGGT............................2111.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCAGATGTACAACGTGCAGAGC2511.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCA...................2011.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCAGAT................2311.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGC....................1911.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCAGATGTACAACGT.......1811.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAG..............................1811.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGGTGGACACGCAGATG...............2311.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACG.....................1811.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGTACAACGTGCAGAGC2211.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGGA.........................2040.5020020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGTGGA.........................2140.2510010
droYak3
A-----------------------------------------------------------------GTGCAGGT----GGCCAGGTGCGCA----GTCAGGACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCCGATTCCGGGGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA------------ATG----------CGCACCGGAAGAAT------------------CC-------GTCGCTCCTCGCATC---------------------------------TCGAAGGCA------------------------T---------------------------------------------------------------------------CTT--TTTTA--ACA---ACGC--TTACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGTACAACGTGCAGAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGT............................2214.00401000030000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACCCAGAT................2412.00200000020000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCAGAT................2312.00201100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAGATGTACAACGTGCAGAGC2512.00200000020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACCCAGA.................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCA...................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAGGT............................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACCCAGATGTACAACGTGCAGA..2611.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGTGGAC........................2611.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGGACACCCAGAT................1811.00101000000000
............................................................................................................................................................................................................GTAA------------ATG----------CGCACCGGAAGAAT------------------CC-------.........................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCAGA.................2211.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAGATGTACAACGTGCAGAG.2311.00100000010000
.........................................................................................................................................................................................................GATGTAA------------ATG----------CGCACCGGA.........................................................................................................................................................................................................................................................................................1911.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACCCAGATGTACAACGTGCAGAGC2811.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGTGGA.........................2130.67200000020000
droEre2
A-----------------------------------------------------------------GTGCAGGT----GGCCAGGTGCGCA----GGCAGGACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGG-------GGATTCCGCC--------GGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA------------ATG----------CGCACAGGAAGGAA------------------CT-------GT--CGCT---CGCC---------------------------------C-GAAGGCA------------------------T---------------------------------------------------------------------------CTT--TTTT--A------ACGC--TTGCTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGTACAACGTGCAGAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGT............................2215.0051001300
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCAGA.................2211.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACCCAGATGTACAACGTGCAGAGC2711.0010000100
...............................................................................................................................................TGG-------GGATTCCGCC--------GGCGCATCAAA.....................................................................................................................................................................................................................................................................................................................................................2411.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCATGTCCATGAAGGAGGTG...........................2211.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAGATGTACAACGTGCAGA..2211.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGACACCCAGATG...............1811.0011000000
........................................................................................GCA----GGCAGGACTT---GGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAGGT............................2011.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCC....................1911.0010000100
...............................................................................GCCAGGTGCGCA----GGCAGGACTT---GGA............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACCCAGAT................2411.0010001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGTGGA.........................2130.6720001010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGGA.........................2030.6720001010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGT............................1840.5020001100

Generated: 05/19/2015 at 08:17 PM