ID:

dvi_17010

 Coordinate:

scaffold_13047:15224081-15224199 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_8152:2]; CDS [Dvir\GJ22782-cds]; exon [dvir_GLEANR_8152:1]; CDS [Dvir\GJ22782-cds]; intron [Dvir\GJ22782-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------##################################################
CAAGATCTGCGACTGGACAAGCACCTCTAACAATGACAAGAAGTATCAAAGTAAGTTAAAGCCAAAGTGTTATTTTGCATATGCACAAAGTGAGGTTATGTTCGCATGTCTGCGCTTTGTTTGTGTGTGTGTCGTGGCAATAAACTGGAGATTAAACTTTTGTTTTTAGATAAATATGCTTCTACCTTTGGCACCGGCAACCAATATGCCTATTACCAT
**************************************************.....((...((.((((((((((...((((((((((((((((.((.((((....)))).)).))))))))..))))))))...)))))).................)))).))....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M061
embryo
 M047
female body
 SRR060668
160x9_males_carcasses_total
 GSM1528803
follicle cells		 SRR060658
140_ovaries_total
 SRR060667
160_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 V047
embryo
 M027
male body		 SRR060657
140_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060680
 9xArg_testes_total
 V053
head
 SRR060682
9x140_0-2h_embryos_total
 M028
head
.......................................................................................................................................................................AAATAAATATGCTTCTACC................................. 19 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GATCTGCGACTGGACAAGCACCTC................................................................................................................................................................................................ 24 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CCGCGTCTACCTTTGGCACCGG...................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................TGCTTCTACCTTTGGCACCGGCA.................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........GCGACTGGACAAGCACCTCTAAC............................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................ACAATGACAAGAAGTATCAAAAT....................................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTACCTTTGGCACCGGCAACCAATATGCCTCTCAG... 35 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........GCGACTGGACAAGCACCTCTA.............................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AAATATGCTTCTACCTTTGGCACC........................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ACCTCTAACAATGACAAGAAGTA.............................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................CACCGGCAACCAATATGCCTATTACC.. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.AAGATCTGCGACTGGACAAGCACC.................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........ACTGGACAAGCACCTCTAACAA.......................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ACCTCTAACAATGACAAGAAGT............................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTACCTTTGGCACCGGCAACC................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GGACAAGCACCTCTAACAATGAC...................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..AGATCGGCGACTGGACAGGCACCTCT............................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................TCTACCTTTGGCACCGGC..................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGGCACCGGCAACCAATATG........... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....ATCTGCGACTGGACAAGCACCT................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GCACCTCTAACAATGACA..................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................AAGCACCTCTAACAATGACAAGAAG................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTACCTTTGGCACCGGCAACCAATATGC.......... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ATATGCTTCTACCTTTGGCACC........................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ATCTGCGACTGGACAAGC..................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AAGCACCTCTAACAATGACA..................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GACAAGCACCTCTAACAATGACAAGA.................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................ATGACAAGAAGTATCAAAATA...................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CTTCTACCTTTGGCACCGGC..................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTACCTTTGGCACCGGCAACCAAT.............. 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AAATATGCTTCTACCTTTGGCACCG....................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........GCGACTGGACAAGCACCTCTAACAAT......................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ATCTGCGACTGGACAAGCACCTC................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.AAGATCTGCGACTGGACAAGCACCTCT............................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......CTGCGACTGGACAAGCACC.................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................CTCCAACAATGACAAGAA................................................................................................................................................................................. 18 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GAGATTAAGCTTTTGTTGT..................................................... 19 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................GCATGGCTGGTCTTTGTTTGT............................................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...GAGCAGCGACTGGACAAGC..................................................................................................................................................................................................... 19 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GTTCTAGACGCTGACCTGTTCGTGGAGATTGTTACTGTTCTTCATAGTTTCATTCAATTTCGGTTTCACAATAAAACGTATACGTGTTTCACTCCAATACAAGCGTACAGACGCGAAACAAACACACACACAGCACCGTTATTTGACCTCTAATTTGAAAACAAAAATCTATTTATACGAAGATGGAAACCGTGGCCGTTGGTTATACGGATAATGGTA
**************************************************.....((...((.((((((((((...((((((((((((((((.((.((((....)))).)).))))))))..))))))))...)))))).................)))).))....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 SRR060687
9_0-2h_embryos_total
 V116
male body		 SRR060684
140x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
...................TCGTCGACATTGTTACTGTTC................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
....................CGTCGACATTGTTACTGTTC................................................................................................................................................................................... 20 2 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................................................ATGGGAACCCTGGCCGATG.................. 19 3 7 0.14 1 0 1 0 0 0 0
...................TCGTTGACATTGTGACTGTTC................................................................................................................................................................................... 21 3 9 0.11 1 1 0 0 0 0 0
........................................................................................................................................................................................................GGTTACACGGCTAATGGGA 19 3 10 0.10 1 0 0 1 0 0 0
.............................................................................................................................................................................TAGACGAAGATGGAGACC............................ 18 2 11 0.09 1 0 0 0 1 0 0
.......................................................................................................................................................................................TGGGAACCCTGGCCGATG.................. 18 3 20 0.05 1 0 0 0 0 0 1
...................TCGTCGACATTGTTCCTGTTC................................................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0
....................CGTCGACATTGCTACTGTTC................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0
...................TTGTGGAGGTTGTTACTG...................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 1 0
...................TCGTCGTAATTGTTACTGTTC................................................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:15224031-15224249 - dvi_17010 CAAGATCTGCGACTGGACAAGCACCTCTAACAATGACAAGAAGTATCAAAGTAAGTTAAAGCC------------------------A--------------------------------------------AAG-TGTTATTTTG-CA---T---------------AT-GC--ACAAAGTGAGGTTATGTTCGCATGTC-------TGCG-CTTTGTTTGT--------GTGTGTGTCGTGGCAA-TA----------A-A-CTGGAGATTAAA--------------------------------------CTTTTG------TT-TTTAGATAAATATGCTTCTACCTTTGGCACCGGCAACCAATATGCCTATTACCAT
droMoj3 scaffold_6540:18701825-18702044 - CAAGATCTGCGATTGGACAAGCACCTCCAATAATGACAAAAAGTATCAGAGTATGTTTCATCC------------------------A--------------------------------------------AAT-TTGTATTTTG-CA---T---------------AT-GC--GTAAAGTGAGGTTATGTTCAAACGCC-------TTCG-CTTTGTTTGT--------GTGTGTGTCGTGGCAT-CA----------A-A-TAGGAGACTA--------------A-----------------------TCATTTGT------TT-TGCAGACAAATATGCTTCTACCTTTGGCACCGGCAATCAATATGCCTATTATCAT
droGri2 scaffold_14830:4760731-4760955 + CAAGATATGCGACTGGACCAGCACCTCGAACAACGACAAGAAGTACCAAAGTGAGTTAAGTAC------------------------AC----C------AA---------------TT-ACATTTCTTC----------------GCA---T---------------AT-GC--ACAAAGTGAGGTTATGTCTGCTTGG--------TGCG-TTTTGTTTGT--------GTGCGTCGCGTGGCAG-CTG---------A-A-TTTGAGAATA--------------A--------------------T-------CCCTTT-TGTT-TGCAGACAAATATGCTTCTACCTTTGGTACCGGCAATCAATACGCCTACTACCAT
droWil2 scf2_1100000004943:9076657-9076898 - AAAGATTTGCGACTGGACCAACACCTCCAACAATGATAAGAAGTACCAAAGTAAGTCCA------------------CAGA---------A--C------AA-----A---------C----------AA--AAAGTGA---------------------AATGCAGGCT-AG--GACAAGTGAGGTTATGTTTGCATTTCGCTGATGTGCGACTTTGTCTGTGTGTGTTTGTGTGTGTCGTGGCAT-TA--------------------------------------ACCA--------CCTT-ATGAC--TCTTTCTG------TT-TGCAGACAAGTATGCTTCCAGCTTTGGCACTGGGATCCAGTACTCCTATTACCAC
dp5 2:3008027-3008251 + GAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTAAGTGCAATAC------------------------AGATGCCGTCTGA-------AAT-------TC-GCATTTCCTC----------------ACA---TTT----GT-------CC-GCCCGCAAAGTGAGGTTATGT---------------------------------------GCGTGTGTCGTGGCAGAG----------G-----------TTACAGCGGTGT-------------------TGTGTTTTT-GTGTTT--------CT-TTCAGACAAGTACGCCTCCAGCTTCGGCACTGGCAACCAGTACTCGTACTACCAT
droPer2 scaffold_7:1341232-1341456 - CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTAAGTGCAATAC------------------------AGATGCCGTCTGA-------AAT-------TC-GCATTTCCTC----------------ACA---TTT----GT-------CC-GCCCGCAAAGTGAGGTTATGT---------------------------------------GCGTGTGTCGTGGCAGAG----------G-----------TTATAGCGGTGT-------------------TGTGTTTTT-GTGTTT--------CT-TTCAGACAAGTACGCCTCCAGCTTCGGCACTGGCAACCAGTACTCGTACTACCAT
droAna3 scaffold_13340:20022314-20022533 - CAAGATCTGCGATTGGACAAGCACCTCGAACAACGACAAGAAGTACCAGAGTAAGTTGATTCG----G---------------------------------GCATGGAG-CACTTA------------------------------------ACTAACTTT-------CC-----GAAAAGTGAGGTTATGT---------------------------------------GCCTGTGTCGTGGCAG-CTGTCTGG---ATGAT----------------TTTTACTCCAATATTCTTTTATTG-ATGT-----------------CT-TTCAGATAAGTACGCGTCCACCTTCGGCACCGGCAATCAGTACTCGTACTACCAT
droBip1 scf7180000396413:2373295-2373514 + CAAGATCTGCGACTGGACTAGCACTTCGAACAACGACAAGAAGTACCAGAGTGAGTTAAATCA----G---------------------------------GCATGGGG-CGCTTA------------------------------------ACTAACATA-------C---C--GAAAAGTGAGGTTATGT---------------------------------------GCCTGTGTCGTGGCAG-CTGTCTAG---ATGAT----------------TGTTACTTTAATATGCTTTTATCG-ATGT-----------------TT-TGCAGATAAGTACGCGTCCACCTTCGGCACCGGCAACCAGTACTCGTACTACCAT
droKik1 scf7180000302639:3071163-3071374 - CAAGATCTGTGACTGGACGAACACCTCCAACAACGACAAGAAGTACCAGAGTGAGTAGG--------------GA-------GTTAC------C------AA-----A---------C----------CG--AAGCTCA--------CC---TTT----GC-CGCAGCCC-GG--CGAAAGTGAGGTTATGT---------------------------------------GCGTGTGTCGTGGCAG-CT---TGAGTG---AT----------------TTTCAC----------------------------CCTC--CTT-TCCC-CGCAGACAAGTACGCCTCCAGCTTTGGAACCGGCAACCAGTACTCGTACTACCAT
droFic1 scf7180000453906:305892-306108 - CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTGAGTAGTAGTGTGTTGTGT-GGT-------GTCACAGAA----------A------AT-------C----------CA--AAA-CGTCG------G-----CT----TT-------CC-GG--TGAAAGTGAGGTTATGT---------------------------------------TGGTGTGTCGTGGCAG-GT--------A-----------------------------ATTT--------AATG-ATATTC-GTAT----------CC-CCCAGATAAGTACGCGTCCAGCTTTGGCACGGGCAACCAGTACTCGTACTACCAC
droEle1 scf7180000491261:54886-54941 - CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779659:524361-524575 - CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTGAGTAT--TCG----G--TGGGA-------GTCAC------T------TA-----AA-A------C-CAGAG-ACCTC----------------GGA---ACT----TT-------CC-GG--CGAAAGTGAGGTTAGGT---------------------------------------TGGTGTGTCGTGGCAG-GT--------A-----------------------------ATCA--------TTTG-GTATTC-TCATT-CA------CC-CCCAGATAAGTACGCCTCCAGCTTTGGCACGGGCAACCAGTACTCGTACTACCAT
droBia1 scf7180000302075:5050065-5050284 + CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTGAGTAG---------------------------------ACC------GACTTGGAC-CG-------CACAG-CCCTC----------------CCA---ACT----TT-------CC-GC--CGAAAGTGAGGTTAGGT---------------------------------------GCGTGTGTCGTGGCAA-CA---CGGGTA-----------------------------ATAC--------ATGGCCTCTTT-CCACTCCCCCG-ATCC-CGCAGACAAGTACGCCTCCAGCTTCGGCACGGGCAACCAGTACTCGTACTACCAT
droTak1 scf7180000415765:1432171-1432407 - CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTGAGTAGCGTCC----C--G--GGGTCA-CAGT------TACC------GA-----AT-C-----C--CACAG-ACCAC----------------CGATTCACT----TT-------CCGGC--CGAAAGTGAGGTTAGGT---------------------------------------GCGTGTGTCGTGGCAG-TA---CGACTA-----------------------------AATT--------ATTG-GTGTTT-CCATTTCTCTATAACT-TTCAGACAAGTACGCCTCCAGCTTCGGCACTGGCAACCAGTACTCGTACTACCAT
droEug1 scf7180000409798:889607-889819 - CAAGATCTGTGACTGGACAAACACCTCGAACAACGACAAGAAGTACCAGAGTAAGTAGT---------------T-------GTTAC------C------AA-----AT-C------C-CACAG-ACCTACG----------------A---ACT----TT-------TC-GC--CGAAAGTGAGGTTATGT---------------------------------------GGGTGTGTCGTGGCAA-TA---TGGGTA-----------------------------ATAT--------AATT-GTCATT--TCTTCCC------CC-CACAGACAAGTACGCCTCCAGTTTTGGCACGGGCAACCAGTACTCGTACTACCAT
dm3 chr3R:19506062-19506283 + CAAGATCTGCGACTGGACGAATACGTCGAACAACGACAAGAAGTACCAGAGTGAGTTTATTCC----C---------CACCCGA------AACC------GA--------C-----C-----------CACAAAA-T---------------ACT----AA-------TC-GC--CGAAAGTGAGGTTAGGT---------------------------------------AGGTGTGTCGTGGCAT-G----------AT-AT----------------TGTTGCTAACAT--------ATTG-GTGGTTGGTATTCCA------TT-CGCAGACAAGTATGCCTCCAGCTTTGGCACGGGCATTCAGTACTCGTACTACCAT
droSim2 3r:19056332-19056553 + dsi_12510 CAAGATCTGCGACTGGACGAACACGTCGAGCAACGACAAGAAGTACCAGAGTGAGTTTAATCC----C---------CAGCAAA------AACC------GA--------C-----C-----------CACAAAA-T---------------ACT----AG-------CC-GC--CGAAAGTGAGGTTAGGT---------------------------------------AGGTGTGTCGTGGCAAAG----------AT-AT----------------TGTTGCTAACAA--------ATTG-GTGTTT-GTATTCCA------TT-TGCAGACAAGTACGCCTCCAGCTTTGGCACGGGCAACCAGTACTCGTACTACCAT
droSec2 scaffold_0:19863768-19863989 + CAAGATCTGCGACTGGACGAACACGTCGAACAACGACAAGAAGTACCAGAGTGAGTTTAATCC----C---------CAGCAAA------AACC------GA--------C-----C-----------CACAAAA-T---------------ACT----AG-------CC-GC--CGAAAGTGAGGTTAGGT---------------------------------------AGGTGTGTCGTGGCAAAG----------AT-AT----------------TGTTGCTAACAT--------ATTG-GTGCTT-GTATTCCA------TT-TGCAGACAAGTACGCCTCAAGCTTTGGCACGGGCAACCAGTACTCGTACTACCAT
droYak3 3R:20402817-20403043 + CAAGATCTGCGACTGGACGAACACGTCCAACAACGACAAGAAGTACCAGAGTGAGTGCAATCC----C--A------CA-CAGA------AACC--CA--GA--------C-----C-----------CACAAAA-G---------------ACTAA---C-------CC-GC--CGAAAGTGAGGTTAGGT---------------------------------------TGGTGTGTCGTGGCAA-G----------AT-AT----------------TGTTGCTAACAT------ATATTG-GTGTTT-TCATTCCA------TTTGGCAGACAAGTACGCCTCCAGCTTTGGCACGGGCAACCAGTACTCGTACTACCAT
droEre2 scaffold_4820:8538658-8538879 - CAAGATCTGCGACTGGACGAACACGTCGAACAACGACAAGAAGTACCAGAGTGAGTGCAAGCC----C---------CTCCAGA------AACC------AG--------C-----C------A-ACCCA--AAA-----------------ACT----AA-------CC-GC--CGAAAGTGAGGTTATGT---------------------------------------GGCTGTGTCGTGGCAA-G----------AT-AT----------------TGTTGCTAACAT--------ATTG-GTGTTT-TCATTCCG------TT-CGCAGACAAGTACGCCTCCAGCTTTGGCACGGGCAACCAGTACTCGTACTACCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CAAGATCTGCGACTGGACAAGCACCTCTAACAATGACAAGAAGTATCAAAGTAAGTTAAAGCC------------------------A--------------------------------------------AAG-TGTTATTTTG-CA---T---------------AT-GC--ACAAAGTGAGGTTATGTTCGCATGTC-------TGCG-CTTTGTTTGT--------GTGTGTGTCGTGGCAA-TA----------A-A-CTGGAGATTAAA--------------------------------------CTTTTG------TT-TTTAGATAAATATGCTTCTACCTTTGGCACCGGCAACCAATATGCCTATTACCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...GATCTGCGACTGGACAAGCACCTC.....................................................................................................................................................................................................................................................................................................................................................................2412.002000000002000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TGCTTCTACCTTTGGCACCGGCA....................2311.001000000000000000000000000001000000000000000000000000000000000000
........GCGACTGGACAAGCACCTCTAAC.................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001
........GCGACTGGACAAGCACCTCTA...................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AAATATGCTTCTACCTTTGGCACC........................2411.001000100000000000000000000000000000000000000000000000000000000000
......................ACCTCTAACAATGACAAGAAGTA...................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CACCGGCAACCAATATGCCTATTACC..2611.001000100000000000000000000000000000000000000000000000000000000000
.AAGATCTGCGACTGGACAAGCACC.......................................................................................................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
...........ACTGGACAAGCACCTCTAACAA...............................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
......................ACCTCTAACAATGACAAGAAGT....................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CTACCTTTGGCACCGGCAACC.................2111.001001000000000000000000000000000000000000000000000000000000000000
..............GGACAAGCACCTCTAACAATGAC...........................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TCTACCTTTGGCACCGGC.....................1811.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TGGCACCGGCAACCAATATG...........2011.001000000000000000000000000000000000000100000000000000000000000000
....ATCTGCGACTGGACAAGCACCT......................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....................GCACCTCTAACAATGACA..........................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
..................AAGCACCTCTAACAATGACAAGAAG.....................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CTACCTTTGGCACCGGCAACCAATATGC..........2811.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................ATATGCTTCTACCTTTGGCACC........................2211.001000100000000000000000000000000000000000000000000000000000000000
....ATCTGCGACTGGACAAGC..........................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..................AAGCACCTCTAACAATGACA..........................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
...............GACAAGCACCTCTAACAATGACAAGA.......................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CTTCTACCTTTGGCACCGGC.....................2011.001000000000000000000000000000000000000000000000000000000000000001
..........................................................................................................................................................................................................................................................................................................................................................CTACCTTTGGCACCGGCAACCAAT..............2411.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AAATATGCTTCTACCTTTGGCACCG.......................2511.001000000000000000001000000000000000000000000000000000000000000000
........GCGACTGGACAAGCACCTCTAACAAT..............................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
....ATCTGCGACTGGACAAGCACCTC.....................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.AAGATCTGCGACTGGACAAGCACCTCT....................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
......CTGCGACTGGACAAGCACC.......................................................................................................................................................................................................................................................................................................................................................................1911.001000000000010000000000000000000000000000000000000000000000000000
droMoj3
CAAGATCTGCGATTGGACAAGCACCTCCAATAATGACAAAAAGTATCAGAGTATGTTTCATCC------------------------A--------------------------------------------AAT-TTGTATTTTG-CA---T---------------AT-GC--GTAAAGTGAGGTTATGTTCAAACGCC-------TTCG-CTTTGTTTGT--------GTGTGTGTCGTGGCAT-CA----------A-A-TAGGAGACTA--------------A-----------------------TCATTTGT------TT-TGCAGACAAATATGCTTCTACCTTTGGCACCGGCAATCAATATGCCTATTATCATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................AAATATGCTTCTACCTTTGGCACC........................2411.001100000
..................................................................................................................................................................................................................................................................................................................................................ATATGCTTCTACCTTTGGCACC........................2211.001100000
....................................................................................................................................................................................................................................................................................................................................................ATGCTTCTACCTTTGGCACCGG......................2211.001100000
..............................................................................................................................................................................................................................................................................................................................................ACAAATATGCTTCTACCTTTGGCACC........................2611.001100000
......................ACCTCCAATAATGACAAAAAGT....................................................................................................................................................................................................................................................................................................................................................2211.001100000
................................................................................................................................................................................................................................................................................................................................................AAATATGCTTCTACCTTTGGC...........................2111.001100000
droGri2
CAAGATATGCGACTGGACCAGCACCTCGAACAACGACAAGAAGTACCAAAGTGAGTTAAGTAC------------------------AC----C------AA---------------TT-ACATTTCTTC----------------GCA---T---------------AT-GC--ACAAAGTGAGGTTATGTCTGCTTGG--------TGCG-TTTTGTTTGT--------GTGCGTCGCGTGGCAG-CTG---------A-A-TTTGAGAATA--------------A--------------------T-------CCCTTT-TGTT-TGCAGACAAATATGCTTCTACCTTTGGTACCGGCAATCAATACGCCTACTACCATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........ACTGGACCAGCACCTCGAA..................................................................................................................................................................................................................................................................................................................................................................1911.00110
..............................................................................................................................................................................................................................................................................................................................................................CTTTGGTACCGGCAATCAATACGC..........2411.00110
..................................................................................................................................................................................................................................................................................................................................................ATATGCTTCTACCTTTGGTACCGGCA....................2611.00110
...........................GAACAACGACAAGAAGTACC.................................................................................................................................................................................................................................................................................................................................................2011.00110
....ATATGCGACTGGACCAGCACCTC.....................................................................................................................................................................................................................................................................................................................................................................2311.00101
..........GACTGGACCAGCACCTCGAACAACGACA..........................................................................................................................................................................................................................................................................................................................................................2811.00110
......................................................................................................................................................................................................................................................................................................................................................GCTTCTACCTTTGGTACCGGC.....................2111.00110
................................ACGACAAGAAGTACCAAAACA...........................................................................................................................................................................................................................................................................................................................................21180.06110
droWil2
AAAGATTTGCGACTGGACCAACACCTCCAACAATGATAAGAAGTACCAAAGTAAGTCCA------------------CAGA---------A--C------AA-----A---------C----------AA--AAAGTGA---------------------AATGCAGGCT-AG--GACAAGTGAGGTTATGTTTGCATTTCGCTGATGTGCGACTTTGTCTGTGTGTGTTTGTGTGTGTCGTGGCAT-TA--------------------------------------ACCA--------CCTT-ATGAC--TCTTTCTG------TT-TGCAGACAAGTATGCTTCCAGCTTTGGCACTGGGATCCAGTACTCCTATTACCACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....TTTGCGACTGGACCAACACCTCC....................................................................................................................................................................................................................................................................................................................................................................2312.00220000
......TTGCGACTGGACCAACACC.......................................................................................................................................................................................................................................................................................................................................................................1911.00110000
..AGATTTGCGACTGGACCAACAC........................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................................................................................................................................................................................CAAGTATGCTTCCAGCTTTGGCACTGG......................2711.00100010
............................AACAATGATAAGAAGTACCAAAA.............................................................................................................................................................................................................................................................................................................................................2311.00100010
..................CAACACCTCCAACAATGATAAGA.......................................................................................................................................................................................................................................................................................................................................................2311.00101000
............................................................................................................................................................................................................................................TGTCGTGGCAT-TA--------------------------------------ACCA--------CC..................................................................................1911.00100001
....................................................................................................................................................................................GTGAGGTTATGTTTGCAT..........................................................................................................................................................................................1811.00100010
....................................................................................................................................................................................................................................................................................................................................................ATGCTTCCAGCTTTGGCACTGGG.....................2311.00100010
......................................................................................................................................................................................................................................TGTGTGTGTCGTGGCAT-TA--------------------------------------ACCA--------CC..................................................................................2511.00100010
..................................................................................................................................................................................................................................................................................................................................................GTATGCTTCCAGCTTTGGCACTGG......................2411.00100010
.........................................................................................................................................................................................................................GTCTGTGTGTGTTTGTGTGTG..................................................................................................................................................21200.05100001
dp5
GAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTAAGTGCAATAC------------------------AGATGCCGTCTGA-------AAT-------TC-GCATTTCCTC----------------ACA---TTT----GT-------CC-GCCCGCAAAGTGAGGTTATGT---------------------------------------GCGTGTGTCGTGGCAGAG----------G-----------TTACAGCGGTGT-------------------TGTGTTTTT-GTGTTT--------CT-TTCAGACAAGTACGCCTCCAGCTTCGGCACTGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....ATCTGCGACTGGACGAGCACCT......................................................................................................................................................................................................................................................................................................................................................................2213.0030300000000
....................................................................................................................................................................................................................................................................................................................................................ACGCCTCCAGCTTCGGCACT........................2012.0020100100000
....................................................................................................................................................................................................................................................................................................................................................ACGCCTCCAGCTTCGGCACTGGC.....................2312.0020200000000
....................................................................................................................................................................................................................................................................................................................................................ACGCCTCCAGCTTCGGCACTG.......................2112.0020200000000
..................................................................................................................................................................................................................................................................................................................................................GTACGCCTCCAGCTTCGGCACTGGC.....................2511.0010100000000
...................................................................................................................................................................................................................................................................................................................................................TACGCCTCCAGCTTCGGCACTGGC.....................2411.0010100000000
......CTGCGACTGGACGAGCACCTCGA...................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........................CGAACAACGACAAGAAGTACC.................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................ACAAGTACGCCTCCAGCTTCGGCACTG.......................2711.0010100000000
.......TGCGACTGGACGAGCACCTCGAAC.................................................................................................................................................................................................................................................................................................................................................................2411.0010000000100
...........................GAACAACGACAAGAAGTACCAGAAC............................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................TGGCAACCAGTACTCGTACTACC..2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................ACAAGTACGCCTCCAGCTTCGGCACT........................2611.0010100000000
..AGATCTGCGACTGGACGAGCACCT......................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
......CTGCGACTGGACGAGCAC........................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.................................................................................................................................................................................................................................................................................................................................................AGTACGCCTCCAGCTTCGGCACTG.......................2411.0010010000000
...GATCTGCGACTGGACGAG...........................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..................................................................................................................................................................................................................................................................................................................................................GTACGCCTCCAGCTTCGGCACTG.......................2311.0010100000000
.....TCTGCGACTGGACGAGCACCTC.....................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
......CTGCGACTGGACGAGCACCT......................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................GTACGCCTCCAGCTTCGGCACT........................2211.0010100000000
...........................GAACAACGACAAGAAGTACC.................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................TACGCCTCCAGCTTCGGCACTG.......................2211.0010100000000
..................................................................................................................................................................................................................................................................................................................................................GTACGCCTCCAGCTTCGGCACTGGCAAC..................2811.0010100000000
........................................................................................................................................................................................................................................................................................................................................................CTCCAGCTTCGGCACTGGC.....................1911.0010100000000
........................CTCGAACAACGACAAGAAGTACCAG...............................................................................................................................................................................................................................................................................................................................................2511.0010100000000
GAAGATCTGCGACTGGACGAGCACCTC.....................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
..........................CGAACAACGACAAGAAGTACCA................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...GATCTGCGACTGGACGAGCAC........................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................CAACGACAAGAAGTACCAGAAC............................................................................................................................................................................................................................................................................................................................................2220.5010001000000
droPer2
CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTAAGTGCAATAC------------------------AGATGCCGTCTGA-------AAT-------TC-GCATTTCCTC----------------ACA---TTT----GT-------CC-GCCCGCAAAGTGAGGTTATGT---------------------------------------GCGTGTGTCGTGGCAGAG----------G-----------TTATAGCGGTGT-------------------TGTGTTTTT-GTGTTT--------CT-TTCAGACAAGTACGCCTCCAGCTTCGGCACTGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....ATCTGCGACTGGACGAGCACCT......................................................................................................................................................................................................................................................................................................................................................................2215.005500000
......CTGCGACTGGACGAGCACCT......................................................................................................................................................................................................................................................................................................................................................................2015.005500000
....................................................................................................................................................................................................................................................................................................................................................ACGCCTCCAGCTTCGGCACTG.......................2114.004400000
.........CGACTGGACGAGCACCTC.....................................................................................................................................................................................................................................................................................................................................................................1813.003300000
..................................................................................................................................................................................................................................................................................................................................................GTACGCCTCCAGCTTCGGCACTG.......................2313.003300000
............CTGGACGAGCACCTCGAACAACGACAAG........................................................................................................................................................................................................................................................................................................................................................2812.002200000
..........................CGAACAACGACAAGAAGTACC.................................................................................................................................................................................................................................................................................................................................................2112.002200000
...GATCTGCGACTGGACGAGCACCTCGA...................................................................................................................................................................................................................................................................................................................................................................2612.002200000
......CTGCGACTGGACGAGCACCG......................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..AGATCTGCGACTGGACGAGC..........................................................................................................................................................................................................................................................................................................................................................................2011.001000010
....................................................................................................................................................................................................................................................................................................................................................ACGCCTCCAGCTTCGGCACC........................2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................CGCCTCCAGCTTCGGCACTGGC.....................2211.001100000
.......................................................................................................................................................................................................................................................................................................................................................CCTCCAGCTTCGGCACTG.......................1811.001100000
......CTGCGACTGGACGAGCACCC......................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....TCTGCGACTGGACGAGCACCT......................................................................................................................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................CTCCAGCTTCGGCACTGGC.....................1911.001100000
.......TGCGACTGGACGAGCACCTCGAACAAC..............................................................................................................................................................................................................................................................................................................................................................2711.001100000
......................................................................................................................................................................................................................................................................................................................................................................CTGGCAACCAGTACTCGTACT.....2111.001100000
.....TCTGCGACTGGACGAGCACCTC.....................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................TACGCCTCCAGCTTCGGCACTG.......................2211.001100000
..........................CGAACAACGACAAGAAGTACCAGA..............................................................................................................................................................................................................................................................................................................................................2411.001000001
.................................CGACAAGAAGTACCAGAA.............................................................................................................................................................................................................................................................................................................................................1830.331100000
droAna3
CAAGATCTGCGATTGGACAAGCACCTCGAACAACGACAAGAAGTACCAGAGTAAGTTGATTCG----G---------------------------------GCATGGAG-CACTTA------------------------------------ACTAACTTT-------CC-----GAAAAGTGAGGTTATGT---------------------------------------GCCTGTGTCGTGGCAG-CTGTCTGG---ATGAT----------------TTTTACTCCAATATTCTTTTATTG-ATGT-----------------CT-TTCAGATAAGTACGCGTCCACCTTCGGCACCGGCAATCAGTACTCGTACTACCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................ACGCGTCCACCTTCGGCACCGGC.....................2314.004110002
...GATCTGCGATTGGACAAGC..........................................................................................................................................................................................................................................................................................................................................................................1913.003010020
.AAGATCTGCGATTGGACAAGCACCT......................................................................................................................................................................................................................................................................................................................................................................2512.002110000
.............................ACAACGACAAGAAGTACCAGA..............................................................................................................................................................................................................................................................................................................................................2111.001000010
....................................................................................................................................................................................................................................................................................................................................................ACGCGTCCACCTTCGGCAC.........................1911.001010000
....ATCTGCGATTGGACAAGCACCTC.....................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...................................................................................................................................................................................................................................................................................................................................................TACGCGTCCACCTTCGGCACCGG......................2311.001010000
..................AAGCACCTCGAACAACGAC...........................................................................................................................................................................................................................................................................................................................................................1911.001010000
.......TGCGATTGGACAAGCACCTCGAAC.................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......CTGCGATTGGACAAGCACCTCGAACA................................................................................................................................................................................................................................................................................................................................................................2611.001100000
........................................................................................................................................................................................................................................................................................................................................................GTCCACCTTCGGCACCGGC.....................1911.001000100
..........GATTGGACAAGCACCTCGAACAAC..............................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................................................................................................................................................................................GTACGCGTCCACCTTCGGCACCGGC.....................2511.001100000
...............GACAAGCACCTCGAACAACGACA..........................................................................................................................................................................................................................................................................................................................................................2311.001010000
....................................................................................................................................................................................................................................................................................................................................................ACGCGTCCACCTTCGGCACC........................2011.001010000
.............TGGACAAGCACCTCGAACA................................................................................................................................................................................................................................................................................................................................................................1911.001000100
...........................................................................................................................................................................................................................................................................................................................................................................AATCAGTACTCGTACTACC..1911.001010000
............TTGGACAAGCACCTCGAACA................................................................................................................................................................................................................................................................................................................................................................2011.001000010
......................ACCTCGAACAACGACAAGAAGT....................................................................................................................................................................................................................................................................................................................................................2211.001000001
......................ACCTCGAACAACGACAAGA.......................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................AACGACAAGAAGTACCAGAA.............................................................................................................................................................................................................................................................................................................................................2011.001000100
..................AAGCACCTCGAACAACGA............................................................................................................................................................................................................................................................................................................................................................1811.001010000
...........................GAACAACGACAAGAAGTACCAGA..............................................................................................................................................................................................................................................................................................................................................2311.001010000
..................................................................................................................................................................................................................................................................................................................................................GTACGCGTCCACCTTCGGCACC........................2211.001010000
...........................................................................................................................................................................................................................................................................................................................................................CACCTTCGGCACCGGCAATCAGTACT...........2611.001100000
............TTGGACAAGCACCTCGAACAAC..............................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............................................................................................................................................................................................................................................................................................................................................ATAAGTACGCGTCCACCTTCGGCACC........................2611.001010000
.....................................................................................................................................................................................................................................................................................................................................................CGCGTCCACCTTCGGCACCGGC.....................2211.001000001
..............................CAACGACAAGAAGTACCAGA..............................................................................................................................................................................................................................................................................................................................................2011.001010000
.....................CACCTCGAACAACGACAAGAAGTACCAGA..............................................................................................................................................................................................................................................................................................................................................2911.001010000
...............................................................................................................................................................................................................................................................................................................................................TAAGTACGCGTCCACCTTCGGCAC.........................2411.001010000
..............................CAACGACAAGAAGTACCAGAA.............................................................................................................................................................................................................................................................................................................................................2111.001010000
.............TGGACAAGCACCTCGAACAAC..............................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............GACAAGCACCTCGAACAAC..............................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............GACAAGCACCTCGAACAACGA............................................................................................................................................................................................................................................................................................................................................................2111.001010000
.................CAAGCACCTCGAACAACGACAAGA.......................................................................................................................................................................................................................................................................................................................................................2411.001010000
...........ATTGGACAAGCACCTCGAACAACGA............................................................................................................................................................................................................................................................................................................................................................2511.001000010
droBip1
CAAGATCTGCGACTGGACTAGCACTTCGAACAACGACAAGAAGTACCAGAGTGAGTTAAATCA----G---------------------------------GCATGGGG-CGCTTA------------------------------------ACTAACATA-------C---C--GAAAAGTGAGGTTATGT---------------------------------------GCCTGTGTCGTGGCAG-CTGTCTAG---ATGAT----------------TGTTACTTTAATATGCTTTTATCG-ATGT-----------------TT-TGCAGATAAGTACGCGTCCACCTTCGGCACCGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotal
No Reads
droKik1
CAAGATCTGTGACTGGACGAACACCTCCAACAACGACAAGAAGTACCAGAGTGAGTAGG--------------GA-------GTTAC------C------AA-----A---------C----------CG--AAGCTCA--------CC---TTT----GC-CGCAGCCC-GG--CGAAAGTGAGGTTATGT---------------------------------------GCGTGTGTCGTGGCAG-CT---TGAGTG---AT----------------TTTCAC----------------------------CCTC--CTT-TCCC-CGCAGACAAGTACGCCTCCAGCTTTGGAACCGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotal
No Reads
droFic1
CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTGAGTAGTAGTGTGTTGTGT-GGT-------GTCACAGAA----------A------AT-------C----------CA--AAA-CGTCG------G-----CT----TT-------CC-GG--TGAAAGTGAGGTTATGT---------------------------------------TGGTGTGTCGTGGCAG-GT--------A-----------------------------ATTT--------AATG-ATATTC-GTAT----------CC-CCCAGATAAGTACGCGTCCAGCTTTGGCACGGGCAACCAGTACTCGTACTACCACSizeHit CountTotal NormTotal
No Reads
droEle1
CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTGAGTAT--TCG----G--TGGGA-------GTCAC------T------TA-----AA-A------C-CAGAG-ACCTC----------------GGA---ACT----TT-------CC-GG--CGAAAGTGAGGTTAGGT---------------------------------------TGGTGTGTCGTGGCAG-GT--------A-----------------------------ATCA--------TTTG-GTATTC-TCATT-CA------CC-CCCAGATAAGTACGCCTCCAGCTTTGGCACGGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotal
No Reads
droBia1
CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTGAGTAG---------------------------------ACC------GACTTGGAC-CG-------CACAG-CCCTC----------------CCA---ACT----TT-------CC-GC--CGAAAGTGAGGTTAGGT---------------------------------------GCGTGTGTCGTGGCAA-CA---CGGGTA-----------------------------ATAC--------ATGGCCTCTTT-CCACTCCCCCG-ATCC-CGCAGACAAGTACGCCTCCAGCTTCGGCACGGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotal
No Reads
droTak1
CAAGATCTGCGACTGGACGAGCACCTCGAACAACGACAAGAAGTACCAGAGTGAGTAGCGTCC----C--G--GGGTCA-CAGT------TACC------GA-----AT-C-----C--CACAG-ACCAC----------------CGATTCACT----TT-------CCGGC--CGAAAGTGAGGTTAGGT---------------------------------------GCGTGTGTCGTGGCAG-TA---CGACTA-----------------------------AATT--------ATTG-GTGTTT-CCATTTCTCTATAACT-TTCAGACAAGTACGCCTCCAGCTTCGGCACTGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotal
No Reads
droEug1
CAAGATCTGTGACTGGACAAACACCTCGAACAACGACAAGAAGTACCAGAGTAAGTAGT---------------T-------GTTAC------C------AA-----AT-C------C-CACAG-ACCTACG----------------A---ACT----TT-------TC-GC--CGAAAGTGAGGTTATGT---------------------------------------GGGTGTGTCGTGGCAA-TA---TGGGTA-----------------------------ATAT--------AATT-GTCATT--TCTTCCC------CC-CACAGACAAGTACGCCTCCAGTTTTGGCACGGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotal
No Reads
dm3
CAAGATCTGCGACTGGACGAATACGTCGAACAACGACAAGAAGTACCAGAGTGAGTTTATTCC----C---------CACCCGA------AACC------GA--------C-----C-----------CACAAAA-T---------------ACT----AA-------TC-GC--CGAAAGTGAGGTTAGGT---------------------------------------AGGTGTGTCGTGGCAT-G----------AT-AT----------------TGTTGCTAACAT--------ATTG-GTGGTTGGTATTCCA------TT-CGCAGACAAGTATGCCTCCAGCTTTGGCACGGGCATTCAGTACTCGTACTACCATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
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DTT		V015
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ML-DmD21		V022
ML-DmD32		V023
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CME-W1-Cl.8+		V029
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CME-W2		V086
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Male-body		V091
fGS/OSS		V092
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S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
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ML-DmD8		V135
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Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.........CGACTGGACGAATACGTCG....................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................ACGAATACGTCGAACAAC..............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TCCAGCTTTGGCACGGGCATTCAGT..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAAGATCTGCGACTGGACG.............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACGAATACGTCGAACAACGACAAGAAGT....................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GAATACGTCGAACAACGA............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................CTCCAGCTTTGGCACGGGCAT...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACGAATACGTCGAACAACGACAAGAA......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAAGATCTGCGACTGGACGAACACGTCGAGCAACGACAAGAAGTACCAGAGTGAGTTTAATCC----C---------CAGCAAA------AACC------GA--------C-----C-----------CACAAAA-T---------------ACT----AG-------CC-GC--CGAAAGTGAGGTTAGGT---------------------------------------AGGTGTGTCGTGGCAAAG----------AT-AT----------------TGTTGCTAACAA--------ATTG-GTGTTT-GTATTCCA------TT-TGCAGACAAGTACGCCTCCAGCTTTGGCACGGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............TGGACGAACACGTCGAGCAACGACAAGA.......................................................................................................................................................................................................................................................................................................................................................28111.001100000000201080000
.............TGGACGAACACGTCGAGCAACGACAA.........................................................................................................................................................................................................................................................................................................................................................2619.00900000000000090000
.......TGCGACTGGACGAACACGTCGAGCAAC..............................................................................................................................................................................................................................................................................................................................................................2715.00500000002012000000
.............TGGACGAACACGTCGAGCAACGACAAGAA......................................................................................................................................................................................................................................................................................................................................................2913.00300000001000020000
.....TCTGCGACTGGACGAACACGTCGAGC.................................................................................................................................................................................................................................................................................................................................................................2612.00200000000000020000
............................................................................................................................................................................................................................................................................................................ATTG-GTGTTT-GTATTCCA------..........................................................1812.00200001100000000000
.......TGCGACTGGACGAACACGTCGAGCAACGA............................................................................................................................................................................................................................................................................................................................................................2912.00200000011000000000
........GCGACTGGACGAACACGG......................................................................................................................................................................................................................................................................................................................................................................1812.00202000000000000000
..................................................................................................................................................................................................................................................................................................................................................GTACGCCTCCAGCTTTGGCACGGGC.....................2512.00200200000000000000
.......TGCGACTGGACGAACACGTCGAGCAA...............................................................................................................................................................................................................................................................................................................................................................2612.00200000000000020000
....ATCTGCGACTGGACGAACACGTCGAGC.................................................................................................................................................................................................................................................................................................................................................................2712.00200000002000000000
..........GACTGGACGAACACGTCG....................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.............TGGACGAACACGTCGAGCAACGACAAG........................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.........CGACTGGACGAACACGTCGAGCAACGAC...........................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
.................CGAACACGTCGAGCAACG.............................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.....TCTGCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
.......TGCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................TGGCACGGGCAACCAGTACTCGTACT.....2611.00100000001000000000
..........................................................................................................................................................................................TTAGGT---------------------------------------AGGTGTGTCGTGGCA..........................................................................................................................................2111.00100000001000000000
..........................CGAGCAACGACAAGAAGTACCAGAACA...........................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
.............TGGACGAACACGTCGAGCAACGAC...........................................................................................................................................................................................................................................................................................................................................................2411.00100000000000010000
.......TGCGACTGGACGAACACGTCGAGCAACG.............................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
................ACGAACACGTCGAGCAACGACAA.........................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
....ATCTGCGACTGGACGAACACGTCGA...................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
.........................TCGAGCAACGACAAGAAGTACCAGAACA...........................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
....ATCTGCGACTGGACGAACA.........................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
..........GACTGGACGAACACGTCGAGCAAC..............................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.......TGCGACTGGACGAACACGTCGA...................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.......TGCGACTGGACGAACACGTCGAG..................................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
.............TGGACGAACACGTCGAGCAACGACA..........................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................ACGGGCAACCAGTACTCGTACTACCA.2611.00100000000100000000
.AAGATCTGCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
.....TCTGCGACTGGACGAACACGTCGAGCA................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
...........................................................................................................................................................................GC--CGAAAGTGAGGTTA...................................................................................................................................................................................................1620.50100000000001000000
CAAGATCTGCGACTGGACGG............................................................................................................................................................................................................................................................................................................................................................................2020.50100000000000001000
...............................AACGACAAGAAGTACCAGAACA...........................................................................................................................................................................................................................................................................................................................................2280.13100000010000000000
droSec2
CAAGATCTGCGACTGGACGAACACGTCGAACAACGACAAGAAGTACCAGAGTGAGTTTAATCC----C---------CAGCAAA------AACC------GA--------C-----C-----------CACAAAA-T---------------ACT----AG-------CC-GC--CGAAAGTGAGGTTAGGT---------------------------------------AGGTGTGTCGTGGCAAAG----------AT-AT----------------TGTTGCTAACAT--------ATTG-GTGCTT-GTATTCCA------TT-TGCAGACAAGTACGCCTCAAGCTTTGGCACGGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......CTGCGACTGGACGAACAC........................................................................................................................................................................................................................................................................................................................................................................1812.0020020
........................................................................................................................................................................................................................................................................................................................................................CTCAAGCTTTGGCACGGGC.....................1912.0020020
..................GAACACGTCGAACAACGAC...........................................................................................................................................................................................................................................................................................................................................................1911.0010010
CAAGATCTGCGACTGGACGAACAC........................................................................................................................................................................................................................................................................................................................................................................2411.0010010
........GCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..........GACTGGACGAACACGTCGAACA................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.AAGATCTGCGACTGGACGAACAC........................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...GATCTGCGACTGGACGAACACGTCG....................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.AAGATCTGCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...GATCTGCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................2311.0010100
................................................................................................................................................................................................................................................................................................................................................AAGTACGCCTCAAGCTTTGGCACGG.......................2511.0010010
......CTGCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................2011.0010010
........GCGACTGGACGAACACGTCG....................................................................................................................................................................................................................................................................................................................................................................2011.0010010
........................................................................................................................................................................................................................................................................................................................................................CTCAAGCTTTGGCACGGA......................1820.5010010
droYak3
CAAGATCTGCGACTGGACGAACACGTCCAACAACGACAAGAAGTACCAGAGTGAGTGCAATCC----C--A------CA-CAGA------AACC--CA--GA--------C-----C-----------CACAAAA-G---------------ACTAA---C-------CC-GC--CGAAAGTGAGGTTAGGT---------------------------------------TGGTGTGTCGTGGCAA-G----------AT-AT----------------TGTTGCTAACAT------ATATTG-GTGTTT-TCATTCCA------TTTGGCAGACAAGTACGCCTCCAGCTTTGGCACGGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................CTTTGGCACGGGCAACCAGTACTCGT........2612.00200000020000
..........................CCAACAACGACAAGAAGTACCA................................................................................................................................................................................................................................................................................................................................................2212.00200000020000
.................................................................................................................................................................................................................................................................................................................................................AGTACGCCTCCAGCTTTGGCACGG.......................2411.00101000000000
...........................CAACAACGACAAGAAGTACCA................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................................GTACGCCTCCAGCTTTGGCAC.........................2111.00101000000000
........................................................................................................................................................................................................................................................................................................................................................CTCCAGCTTTGGCACGGGC.....................1911.00100100000000
...............................AACGACAAGAAGTACCAGA..............................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..................................................................................................................................................................................................................................................................................................................................................GTACGCCTCCAGCTTTGGCACC........................2211.00100100000000
....................ACACGTCCAACAACGACAAGAAGT....................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..................................................................................................................................................................................................................................................................................................................................................GTACGCCTCCAGCTTTGGCACG........................2211.00101000000000
..................................................................................................................................................................................................................................................................................................................................................GTACGCCTCCAGCTTTGGCACGG.......................2311.00101000000000
...........................CAACAACGACAAGAAGTAC..................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
......CTGCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.....TCTGCGACTGGACGAACA.........................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000
....................................................................................................................................................................................................................................................................................................................................................................CACGGGCAACCAGTACTCGTACTAC...2511.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................CGCCTCCAGCTTTGGCACGGGC.....................2211.00101000000000
............................AACAACGACAAGAAGTACCA................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................................................................................................................................................................................................................................................................................................................................................AGTACGCCTCCAGCTTTGGCACGGGC.....................2611.00101000000000
.................................................................................................................................................................................................................................................................................................................................................AGTACGCCTCCAGCTTTGGCACGGG......................2511.00100100000000
.......TGCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.AAGATCTGCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..............................CAACGACAAGAAGTACCAGAACA...........................................................................................................................................................................................................................................................................................................................................2380.25201000010000
droEre2
CAAGATCTGCGACTGGACGAACACGTCGAACAACGACAAGAAGTACCAGAGTGAGTGCAAGCC----C---------CTCCAGA------AACC------AG--------C-----C------A-ACCCA--AAA-----------------ACT----AA-------CC-GC--CGAAAGTGAGGTTATGT---------------------------------------GGCTGTGTCGTGGCAA-G----------AT-AT----------------TGTTGCTAACAT--------ATTG-GTGTTT-TCATTCCG------TT-CGCAGACAAGTACGCCTCCAGCTTTGGCACGGGCAACCAGTACTCGTACTACCATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.AAGATCTGCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................2513.0030000210
.................................................................................................................................................................................................................................................................................................................................................................TGGCACGGGCAACCAGTACTCGTAC......2513.0033000000
.....................................................................................................................................................................................................................................................................................................................................................CGCCTCCAGCTTTGGCACGGGC.....................2212.0021100000
..................................................................................................................................................................................................................................................................................................................................................GTACGCCTCCAGCTTTGGCACGGGC.....................2512.0020200000
......................................................................................................................................................................................................................................................................................................................................................................CGGGCAACCAGTACTCGTACTAC...2311.0011000000
...............................................................................................................................................................................................................................................................................................................................................................TTTGGCACGGGCAACCAGTACTCG.........2411.0011000000
..............................................................................................................................................................................................................................................................................................................................................ACAAGTACGCCTCCAGCTTT..............................2011.0010001000
...........................GAACAACGACAAGAAGTACC.................................................................................................................................................................................................................................................................................................................................................2011.0010100000
................................................................................................................................................................................................................................................................................................................................................AAGTACGCCTCCAGCTTTGGCACGGGC.....................2711.0010100000
....ATCTGCGACTGGACGAACACGT......................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
........................................................................................................................................................................................................................................................................................................................................................CTCCAGCTTTGGCACGGGCAACC.................2311.0010100000
.................................................................................................................................................................................................................................................................................................................................................AGTACGCCTCCAGCTTTGGCACGGGCA....................2711.0011000000
.....TCTGCGACTGGACGAACACGTCG....................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
......CTGCGACTGGACGAACAC........................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.................................................................................................................................................................................................................................................................................................................................................AGTACGCCTCCAGCTTTGGCACGGG......................2511.0011000000
CAAGATCTGCGACTGGACGAACA.........................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.................................................................................................................................................................................................................................................................................................................................................................TGGCACGGGCAACCAGTACTCGTACTACC..2911.0011000000
....................................................................................................................................................................................................................................................................................................................................................ACGCCTCCAGCTTTGGCACGGG......................2211.0010100000
................................................................................................................................................................................................................................................................................................ACAT--------ATTG-GTGTTT-TCATTCCG------TT-CGCA...................................................2811.0011000000
....ATCTGCGACTGGACGAACACGTCG....................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
..................................................................................................................................................................................................................................................................................................................................................................GGCACGGGCAACCAGTACTCGTACTAC...2711.0011000000
.......................................................................................................................................................................................................................................................................................................................................................CCTCCAGCTTTGGCACGGGCAACCA................2511.0010100000
.....................................................................................................................................AA-----------------ACT----AA-------CC-GC--CGAAAGTGAGGT.....................................................................................................................................................................................................2311.0010001000
CAAGATCTGCGACTGGACGAACAC........................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
...GATCTGCGACTGGACGAACAC........................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.....TCTGCGACTGGACGAACACGTCGA...................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...GATCTGCGACTGGACGAACACGTCG....................................................................................................................................................................................................................................................................................................................................................................2511.0010100000

Generated: 05/19/2015 at 08:12 PM