ID:

dvi_16888

 Coordinate:

scaffold_13047:13953780-13953885 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.27 -7.27 -7.07 -7.07

Flybase annnotation

exon [dvir_GLEANR_9684:6]; CDS [Dvir\GJ24405-cds]; exon [dvir_GLEANR_9684:5]; CDS [Dvir\GJ24405-cds]; intron [Dvir\GJ24405-in]

Repeatable elements

NameClassFamilyStrand
(A)nSimple_repeatSimple_repeat+
mature
  1. scaffold_12723:4234746-4234769 +
  2. scaffold_12723:4560413-4560436 +
  3. scaffold_12726:2007446-2007469 +
  4. scaffold_12855:1002829-1002852 +
  5. scaffold_12875:18401957-18401980 +
  6. scaffold_12928:4273262-4273285 +
  7. scaffold_12928:4620530-4620553 +
  8. scaffold_12928:7467952-7467975 +
  9. scaffold_12932:1845680-1845703 +
  10. scaffold_12963:581548-581571 +
  11. scaffold_12963:2977100-2977123 +
  12. scaffold_12963:7804085-7804108 +
  13. scaffold_12963:7879169-7879192 +
  14. scaffold_12963:10087350-10087373 +
  15. scaffold_12963:19051682-19051705 +
  16. scaffold_13049:4989928-4989951 +
  17. scaffold_13049:5839871-5839894 +
  18. scaffold_13049:6131787-6131810 +
  19. scaffold_13049:8005716-8005739 +
  20. scaffold_13246:1862368-1862391 +
  21. scaffold_1049:824-847 +
  22. scaffold_12234:494-517 +
  23. scaffold_12350:923-946 +
  24. scaffold_12723:3709678-3709701 +
  25. dvi_4277  scaffold_12855:7241229-7241252 +
  26. scaffold_12928:6576523-6576546 +
  27. scaffold_12954:1106388-1106411 +
  28. scaffold_12963:7027484-7027507 +
  29. scaffold_12970:2359521-2359544 +
  30. scaffold_12970:2903479-2903502 +
  31. scaffold_13045:440030-440053 +
  32. scaffold_13047:2210318-2210341 +
  33. scaffold_13047:6289996-6290019 +
  34. scaffold_13047:11662892-11662915 +
  35. scaffold_13049:12889304-12889327 +
  36. scaffold_13049:17830498-17830521 +
  37. scaffold_13049:22555864-22555887 +
  38. scaffold_13049:23637966-23637989 +
  39. scaffold_13050:33205-33228 +
  40. scaffold_13246:546003-546026 +
  41. scaffold_2826:783-806 +
  42. scaffold_3000:1116-1139 +
  43. scaffold_3000:1270-1293 +
  44. scaffold_3000:1401-1424 +
  45. scaffold_4692:1055-1078 +
  46. scaffold_8645:1280-1303 +
  47. scaffold_8775:2573-2596 +
  48. scaffold_12002:2828-2851 +
  49. scaffold_12855:5981056-5981079 +
  50. scaffold_12855:6725962-6725985 +
  51. scaffold_12932:1733996-1734019 +
  52. scaffold_12932:1734088-1734111 +
  53. scaffold_12963:7736230-7736253 +
  54. scaffold_12963:7736319-7736342 +
  55. scaffold_12963:7736491-7736514 +
  56. scaffold_12963:8211893-8211916 +
  57. scaffold_12963:8212146-8212169 +
  58. scaffold_12963:15027764-15027787 +
  59. scaffold_13049:1207837-1207860 +
  60. scaffold_13049:14296666-14296689 +
  61. scaffold_7755:352-375 +
  62. scaffold_8741:1344-1367 +
  63. scaffold_9946:1116-1139 +
  64. scaffold_10091:905-928 +
  65. scaffold_10142:468-491 +
  66. scaffold_10257:8642-8665 +
  67. scaffold_10709:476-499 +
  68. scaffold_12723:2652326-2652349 +
  69. scaffold_12841:44427-44450 +
  70. scaffold_12855:3138337-3138360 +
  71. scaffold_12875:1025285-1025308 +
  72. scaffold_12954:1742867-1742890 +
  73. scaffold_12963:4773345-4773368 +
  74. scaffold_12963:18589522-18589545 +
  75. scaffold_12967:541338-541361 +
  76. scaffold_13047:7936215-7936238 +
  77. scaffold_13049:5867414-5867437 +
  78. scaffold_13049:21891613-21891636 +
  79. scaffold_13052:131633-131656 +
  80. scaffold_10930:347-370 +
  81. scaffold_12822:3695230-3695253 +
  82. scaffold_12855:2012413-2012436 +
  83. scaffold_12928:2248131-2248154 +
  84. scaffold_12928:7453979-7454002 +
  85. scaffold_12958:1323511-1323534 +
  86. scaffold_12963:5209124-5209147 +
  87. scaffold_12963:13465580-13465603 +
  88. scaffold_12970:3754030-3754053 +
  89. scaffold_12970:10294084-10294107 +
  90. scaffold_12970:10341805-10341828 +
  91. scaffold_12970:10852194-10852217 +
  92. scaffold_13042:1970419-1970442 +
  93. scaffold_13047:2285502-2285525 +
  94. scaffold_13047:11677826-11677849 +
  95. scaffold_13047:12769229-12769252 +
  96. scaffold_13049:15696964-15696987 +
  97. scaffold_13049:19643171-19643194 +
  98. scaffold_13354:32591-32614 +
  99. dvi_24245  scaffold_2826:682-705 +
  100. scaffold_7535:5328-5351 +
  101. scaffold_8468:1066-1089 +
  102. scaffold_8614:906-929 +
  103. scaffold_8775:2522-2545 +
  104. scaffold_9469:7499-7522 +
  105. scaffold_9909:6901-6924 +
  106. scaffold_12932:1734140-1734163 +
  107. scaffold_12963:8212215-8212238 +
  108. scaffold_13049:1207795-1207818 +
  109. scaffold_13049:23289322-23289345 +
  110. scaffold_12932:1733945-1733968 +
  111. scaffold_12963:7736424-7736447 +
  112. scaffold_13049:14296725-14296748 +
  113. scaffold_12970:10454636-10454659 +
  114. scaffold_3000:1195-1218 +
  115. scaffold_12785:10399-10422 +
  116. scaffold_12928:887224-887247 +
  117. scaffold_12928:3778152-3778175 +
  118. scaffold_12963:8211928-8211951 +
  119. scaffold_12970:1130531-1130554 +
  120. scaffold_2826:814-837 +
  121. scaffold_9098:1642-1665 +
  122. scaffold_9604:5498-5521 +
  123. scaffold_12963:7736261-7736284 +
  124. scaffold_12963:7736448-7736471 +
  125. scaffold_13049:1207868-1207891 +
  126. scaffold_13324:215919-215942 +
  127. scaffold_9452:3613-3636 +
  128. scaffold_10324:141700-141723 +
  129. scaffold_12717:4475-4498 +
  130. scaffold_12822:409848-409871 +
  131. scaffold_12875:3438057-3438080 +
  132. scaffold_12875:3879717-3879740 +
  133. scaffold_12875:15605572-15605595 +
  134. scaffold_12875:17029010-17029033 +
  135. scaffold_12875:20314538-20314561 +
  136. scaffold_12932:1733851-1733874 +
  137. scaffold_12943:194557-194580 +
  138. scaffold_12963:7736096-7736119 +
  139. scaffold_12970:11701696-11701719 +
  140. scaffold_13042:4168378-4168401 +
  141. dvi_15171  scaffold_13047:1733132-1733155 +
  142. scaffold_13049:18832165-18832188 +
  143. scaffold_13132:1996-2019 +
  144. scaffold_12823:284335-284358 +
  145. scaffold_12875:17012521-17012544 +
  146. scaffold_12932:1733921-1733944 +
  147. scaffold_12963:7736400-7736423 +
  148. scaffold_13047:11931945-11931968 +
  149. scaffold_13049:14296701-14296724 +
  150. scaffold_13049:14296844-14296867 +
  151. scaffold_214:301-324 +
  152. scaffold_13049:24602161-24602184 +
  153. scaffold_12875:8164480-8164503 +
  154. scaffold_12963:4786936-4786959 +
  155. scaffold_12963:12693435-12693458 +
  156. scaffold_12970:8137116-8137139 +
  157. scaffold_13047:4439128-4439151 +
  158. scaffold_13049:78459-78482 +
  159. scaffold_13049:9646283-9646306 +
  160. scaffold_13049:15116234-15116257 +
  161. scaffold_13049:20336227-20336250 +
  162. scaffold_6888:3224-3247 +
  163. scaffold_12928:3949646-3949669 +
  164. scaffold_2379:28-51 -
  165. scaffold_5385:28-51 -
  166. scaffold_6142:945-968 -
  167. scaffold_8078:401-424 -
  168. scaffold_9568:72-95 -
  169. scaffold_12741:47894-47917 -
  170. scaffold_12788:49497-49520 -
  171. scaffold_12823:199523-199546 -
  172. scaffold_12928:1589749-1589772 -
  173. scaffold_12963:19383411-19383434 -
  174. scaffold_12967:324181-324204 -
  175. scaffold_12970:5793842-5793865 -
  176. scaffold_13047:724148-724171 -
  177. scaffold_13047:3482388-3482411 -
  178. scaffold_13047:6339539-6339562 -
  179. scaffold_13049:8028663-8028686 -
  180. scaffold_13049:22360992-22361015 -
  181. scaffold_13049:24338002-24338025 -
  182. scaffold_13052:1897607-1897630 -
  183. scaffold_13324:1571116-1571139 -
  184. scaffold_12002:2852-2875 +
  185. scaffold_12855:5981080-5981103 +
  186. scaffold_12815:201485-201508 +
  187. scaffold_12875:15313368-15313391 +
  188. scaffold_12875:19751711-19751734 +
  189. scaffold_12928:1325910-1325933 +
  190. scaffold_12970:3847316-3847339 +
  191. scaffold_12970:7506420-7506443 +
  192. dvi_22949  scaffold_12970:11676752-11676775 +
  193. scaffold_13047:13262756-13262779 +
  194. scaffold_13047:14078998-14079021 +
  195. scaffold_992:1041-1064 +
  196. scaffold_12928:157089-157112 +
  197. scaffold_12928:1978178-1978201 +
  198. scaffold_12928:3190254-3190277 +
  199. scaffold_12928:4982669-4982692 +
  200. scaffold_12932:1733811-1733834 +
  201. scaffold_12932:1874503-1874526 +
  202. scaffold_12970:5850963-5850986 +
  203. scaffold_12970:7120315-7120338 +
  204. scaffold_13042:4918164-4918187 +
  205. scaffold_13042:5120461-5120484 +
  206. scaffold_13049:19369452-19369475 +
  207. scaffold_13324:1299357-1299380 +
  208. scaffold_4534:5947-5970 +
  209. scaffold_8505:2349-2372 +
  210. scaffold_12875:549548-549571 +
  211. scaffold_12875:7097952-7097975 +
  212. scaffold_12928:5379788-5379811 +
  213. scaffold_12963:3810633-3810656 +
  214. scaffold_12963:4361732-4361755 +
  215. scaffold_12963:16403670-16403693 +
  216. scaffold_12963:19198314-19198337 +
  217. scaffold_12970:5611467-5611490 +
  218. scaffold_12970:9508084-9508107 +
  219. dvi_16888  scaffold_13047:13953789-13953812 +
  220. dvi_19135  scaffold_13049:9258513-9258536 +
  221. scaffold_13049:16378788-16378811 +
star

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------##################################################
CTGGGCGAAGGCACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTACCAAAAAAAAAAAAAAAAAAAAAAAAGCAAACCCTTCCCACAGTACTTGACCAAACAGCCTATTTATATTTAATGTATGCATATGAATGTGTTTCACAGTGATTTTTGCATGGCCCTGAAGATCATCAAGAATGTTGAGAAATATCGTG
**************************************************........................................((...((((.........((.(((....((....))....))).))........))))......))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060667
160_females_carcasses_total
 SRR060663
160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 M027
male body		 M061
embryo
 SRR060670
9_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 M047
female body
 SRR060659
Argentina_testes_total
 V053
head
 SRR060668
160x9_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 V047
embryo
 GSM1528803
follicle cells		 SRR1106728
larvae
 SRR060671
9x160_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 V116
male body
.........GGCACTTTCGGACGTGTGGTC................................................................................................................................................................................ 21 0 1 3.00 3 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GCCCTGAAGATCATCAAGAATGTTGA........... 26 0 1 3.00 3 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........AGGCACTTTCGGACGTGTGGTC................................................................................................................................................................................ 22 0 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GCACTTTCGGACGTGTGGTCAAGGTC.......................................................................................................................................................................... 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......AAGGCACTTTCGGACGTGT.................................................................................................................................................................................... 19 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TCCCTGAAGATCATCAAGAATGTTGA........... 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GATTTTTGCATGGCCCTGA.............................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........ATGCACTTTCGGACGTGTGGTC................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GACGTGTGGTCAAGGTCAAAG...................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................GGTCAAGGTCAAAGACATGGAGCGT........................................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................GAAGATCATCAAGAATGTTGA........... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GAAGATCATCAAGAATGTT............. 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GATTTTTGCATGGCCCTGAAGATCAT....................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GTGATTTTTGCATGGCCCTGAAGAT.......................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CTGAAGATCATCAAGAATGTT............. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TGGTCAAGGTCAAAGACATGGA............................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................ACTTGACCAAACAGCGTATT..................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................AAGGTCAAAGACATGGAGCGT........................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................ATTTTTGCATGGCCCTGAAG............................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TCACAGTGATGTTTGAAAGGCC.................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................GTCAAGGTCAAAGACATGG................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GCCCTGAAGATCATCAAGAATGTT............. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GCCCTGAAGATCATCAAGAATCTTG............ 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........GCACTTTCGGACGTGTGGTCAAGGT........................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GGTCAAAGACATGGAGCGTGAT........................................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GAAGGCACTTTCGGACGTGT.................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ATTTTTGCATGGCCCTGAAGATC......................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TTCGGACGTGTGGTCAAGGTC.......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................GGACGTGTGGTCAAGGTCA......................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GGCACTTTCGGACGTGTG................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................AAAAAAAAAAAAAAAAAAAAAAAA........................................................................................................................... 24 0 20 0.40 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0
..................................................GTAAGGTCCAAAAAAAAAAAAAAAAAAAAAAA............................................................................................................................ 32 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................AAAAAAAAAAAAAAAAAAA............................................................................................................................. 19 0 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0
.........................................................................................................................................................................GCTCTGAAGACCATCAAAAA................. 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................CGAGTGGTCAAGGCAAAAGA..................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................CGGGTCATCAAGAATGTTG............ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GACCCGCTTCCGTGAAAGCCTGCACACCAGTTCCAGTTTCTGTACCTCGCCATTCATGGTTTTTTTTTTTTTTTTTTTTTTTTCGTTTGGGAAGGGTGTCATGAACTGGTTTGTCGGATAAATATAAATTACATACGTATACTTACACAAAGTGTCACTAAAAACGTACCGGGACTTCTAGTAGTTCTTACAACTCTTTATAGCAC
**************************************************........................................((...((((.........((.(((....((....))....))).))........))))......))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060656
9x160_ovaries_total
 V047
embryo
 M027
male body
.........................................................................................................................................................................CGGGACTTCTAGTAGTTCTTA................ 21 0 1 1.00 1 0 1 0 0
..CCCGCTTCCGTGAAAGCCTG........................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0
......................................................CATGGTTGTTTTTTTTTTTTTTTTTTTTTGGG........................................................................................................................ 32 3 4 0.25 1 0 0 1 0
.............................................................................................................TTTGTCGGAGCAATATAATTT............................................................................ 21 3 5 0.20 1 1 0 0 0
........................................................................................................................................................................CCGGGAAGACTAGTAGTTC................... 19 3 13 0.08 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:13953730-13953935 + dvi_16888 CTGGGCGAAGGCACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTACCAAAA-----------------A---AAAAAAAAAAAAAAA--------------------A------AAAGCAAACCCTTCCCACAGTACTTGACCAAACAGCC--TA-TTTATATTTAATGTATGCATATGAATGTGTTTCACAGTGATTTTTGCATGGCCCTGAAGATCATCAAGAATGTTGAGAAATATCGTG
droMoj3 scaffold_6540:26132405-26132595 - CTGGGCGAGGGCACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAACGGTAAGTACAATGAAATACCGAAAAATTTTATGATCTATATATAAATG--CAAATAATAATAAAATTGTT---------C----G--------------------CAAATACCC--AT-----T----------------------CGATTCACAGTGATTTTTGCATGGCCTTGAAGATCATCAAGAATGTTGAAAAATATCGCG
droGri2 scaffold_14830:6002884-6003050 - TTGGGCGAGGGCACCTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTTCAATGAAA-------------------CCA---T-----------------------------TTCTTCGAAGTT-----------A--------CTCTAATTACA--CT-TTTTTCTCTAATGC---------------ATTCACAGTGATTTTTGCATGGCCTTGAAGATCATCAAGAATGTTGAGAAATATCGCG
droWil2 scf2_1100000004921:770465-770640 - TTGGGCGAAGGTACATTCGGACGAGTGGTCAAGGTGAAAGACATGGAGCGGTAAGTGTTA-------------------------------------------------------------------------ATCATTCTTCTCCTGCTTAAGACAACTTTT--AA-TTAATTTTTAATTAATCAATTC---CTTTTTCCACAGTGACTACTGCATGGCCCTGAAAATCATAAAAAATGTGGAAAAATATCGTG
dp5 2:13934714-13934874 - CTCGGCGAGGGCACTTTCGGACGTGTGGTCAAAGTCAAAGACATGGAGCGGTAAGTCCTCGAA-----------------T---CTAGCCTCTAGCCCT--------------------G------TAACTA-----------A---------TCTAATGCCC--TT--CTCC------------------------CTTTTCAGTGATTACTGCATGGCCTTAAAGATTATCAAGAATGTGGAAAAGTATCGCG
droPer2 scaffold_0:6509118-6509274 + CTCGGCGAGGGCACATTCGGACGTGTGGTCAAAGTAAAAGACATGGAGCGGTAAGTACTCGAA-----------------T---CTAGGCC----------------------------T------CTAGCC-----------CTGTA-----ACTAATGCCC--T--TCTCC------------------------CTTTTCAGTGATTACTGCATGGCCTTAAAGATTATCAAGAATGTGGAAAAGTATCGCG
droAna3 scaffold_13340:7841585-7841756 - CTGGGCGAGGGTACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTCTGATTACCCACTGG-------------CGGTGGT-----------------------------TACAGTGGAGCA-----------A---------CCCAACATAATGT--TCTATTTTTA-------------------ACTTCCAGTGATTACTGCATGGCCCTGAAGATTATAAAGAACGTGGAAAAGTACCGCG
droBip1 scf7180000396708:1005910-1006081 + CTGGGCGAGGGTACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTCTGATTACTCATTGG-------------TAACTTT-----------------------------TACACTCAAGCA-----------A---------CCTAACACGATGT--TCTATTTTTA-------------------AATTCCAGTGATTACTGCATGGCCCTGAAGATTATAAAGAACGTGGAAAAGTACCGCG
droKik1 scf7180000302639:2644349-2644404 - CTGGGCGAGGGAACTTTCGGACGTGTGGTTAAGGTGAAAGACATGGAGCGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454073:3602784-3602942 - CTGGGCGAGGGAACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTTTAGTTA-----------------C---TTTTATATAAAGT-----------------------------AAACCA-----------A---------TGCTAAATTG--TT-TTAAT------------------------CCTTCCAGTGATTATTGCATGGCCTTAAAGATTATTAAGAACGTGGAAAAGTACCGCG
droEle1 scf7180000491261:1317914-1318075 + CTGGGCGAGGGTACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGATCCTCTA-----------------T---TTGCAAATTTATT-----------------------------GAGGCC-----------TTATAT----CTTAAA--TC--TT-TCAAT------------------------TGTTTTAGTGATTACTGCATGGCCTTAAAGATCATTAAGAACGTGGAAAAGTACCGTG
droRho1 scf7180000780007:314688-314846 - CTGGGAGAGGGAACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGATCCTCTA-----------------T---TTGTGAATTAATT-----------------------------AGAGCA-----------A---------TACAAAACGT--TC-TCAAT------------------------CGTTTCAGTGATTACTGCATGGCCTTAAAGATTATTAAGAACGTGGAAAAGTACCGTG
droBia1 scf7180000302075:2005372-2005532 - CTGGGCGAGGGAACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTGAGTTTCCCTG-----------------C---TTTTCAATTACTT-----------------------------GAATCT-----------T---------TCTAAAACGT--TTCTTTGT---T--------------------GACTCTAGTGATTACTGCATGGCCTTGAAGATTATTAAGAACGTGGAGAAGTACCGCG
droTak1 scf7180000415700:311869-312031 + CTGGGCGAGGGAACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTTTTTATA-----------------CGTTTTGTAAATTAATT-----------------------------AAAGTA-----------A---------TCTAAGTCAC--TTATAAAT------------------------TGTTTCAGCGATTATTGCATGGCCTTGAAGATTATTAAGAACGTGGAGAAGTACCGCG
droEug1 scf7180000409787:836094-836254 - CTGGGTGAGGGAACCTTTGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTTCTGAAG-----------------T---TCTTGAATCAATC-----------------------------GAAATA-----------A--TA-----CATAAAACTT--TCCTT-CA------------------------TGTTTCAGTGATTACTGCATGGCCTTGAAGATTATTAAGAACGTGGAAAAGTACCGTG
dm3 chr3R:24745964-24746125 + CTGGGCGAGGGAACTTTTGGACGTGTGGTCAAGGTCAAAGATATGGAGCGGTAAGAATTTCCA-----------------T---ACAAGAAATAAAATA--------------------T------TAAGTA-----------C---------TTTAACCGCC--CT-TTTAT------------------------CGTTTTAGTGATTACTGCATGGCTTTAAAGATTATTAAGAACGTGGAAAAGTACCGCG
droSim2 3r:24107451-24107612 + CTGGGCGAGGGAACTTTTGGACGTGTGGTCAAGGTCAAAGATATGGAGCGGTAAGATTTTCCA-----------------T---ACAAGAACTAAAAGA--------------------T------TAAGTA-----------C---------TTTAACCGCC--CT-TTCAT------------------------TGTTTCAGTGATTACTGTATGGCTTTAAAGATTATAAAGAACGTGGAAAAGTACCGCG
droSec2 scaffold_4:3609187-3609348 + CTGGGCGAGGGAACTTTTGGACGTGTGGTCAAGGTCAAAGATATGGAGCGGTAAGAATTTCCA-----------------T---ACAAGAAATAAAAGA--------------------T------TAAGTA-----------C---------TTTAACCGCC--TT-TTCAT------------------------TGTTTCAGTGATTACTGTATGGCTTTAAAGATTATAAAGAACGTGGAAAAGTACCGCG
droYak3 3R:21755447-21755608 - CTGGGCGAAGGAACTTTTGGACGTGTGGTCAAGGTCAAAGATATGGAGCGGTAAGATTTACCA-----------------T---CTATGAAGTATAAGT--------------------A------TAAGCA-----------A---------TCTAACGCCC--TT-TTCAT------------------------TGTTTCAGTGATTACTGCATGGCCTTAAAGATTATTAAGAACGTGGAAAAGTACCGCG
droEre2 scaffold_4820:3291233-3291394 - CTGGGCGAAGGAACTTTTGGACGTGTGGTCAAGGTCAAAGATATGGAGCGGTAAGAACTACCA-----------------T---CTAAGTAATATAATG--------------------T------AATATA-----------A---------TCTAACGCCC--TT-TTCAT------------------------CGTTTCAGTGATTACTGCATGGCCTTAAAGATTATTAAGAACGTGGAAAAGTACCGCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTGGGCGAAGGCACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTACCAAAA-----------------A---AAAAAAAAAAAAAAA--------------------A------AAAGCAAACCCTTCCCACAGTACTTGACCAAACAGCC--TA-TTTATATTTAATGTATGCATATGAATGTGTTTCACAGTGATTTTTGCATGGCCCTGAAGATCATCAAGAATGTTGAGAAATATCGTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........GGCACTTTCGGACGTGTGGTC.................................................................................................................................................................................................................................2113.003000000000200000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................GCCCTGAAGATCATCAAGAATGTTGA...........2613.003000000000000000000002000000000000000100000000000000000000000000
........AGGCACTTTCGGACGTGTGGTC.................................................................................................................................................................................................................................2212.002001100000000000000000000000000000000000000000000000000000000000
..........GCACTTTCGGACGTGTGGTCAAGGTC...........................................................................................................................................................................................................................2612.002200000000000000000000000000000000000000000000000000000000000000
.......AAGGCACTTTCGGACGTGT.....................................................................................................................................................................................................................................1912.002001000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GATTTTTGCATGGCCCTGA..............................1911.001000000000000000000000000000001000000000000000000000000000000000
...................GACGTGTGGTCAAGGTCAAAG.......................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
..........................GGTCAAGGTCAAAGACATGGAGCGT............................................................................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................GAAGATCATCAAGAATGTTGA...........2111.001000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................GAAGATCATCAAGAATGTT.............1911.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................GATTTTTGCATGGCCCTGAAGATCAT.......................2611.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................GTGATTTTTGCATGGCCCTGAAGAT..........................2511.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CTGAAGATCATCAAGAATGTT.............2111.001000000000000010000000000000000000000000000000000000000000000000
.........................TGGTCAAGGTCAAAGACATGGA................................................................................................................................................................................................................2211.001000000000000000000000000010000000000000000000000000000000000000
..............................AAGGTCAAAGACATGGAGCGT............................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................ATTTTTGCATGGCCCTGAAG............................2011.001100000000000000000000000000000000000000000000000000000000000000
...........................GTCAAGGTCAAAGACATGG.................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................GCCCTGAAGATCATCAAGAATGTT.............2411.001000000000000000000000000000001000000000000000000000000000000000
..........GCACTTTCGGACGTGTGGTCAAGGT............................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
......GAAGGCACTTTCGGACGTGT.....................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................ATTTTTGCATGGCCCTGAAGATC.........................2311.001000000000000010000000000000000000000000000000000000000000000000
...............TTCGGACGTGTGGTCAAGGTC...........................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..................GGACGTGTGGTCAAGGTCA..........................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
.........GGCACTTTCGGACGTGTG....................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
...........................................................AAAA-----------------A---AAAAAAAAAAAAAAA--------------------A------AAA..............................................................................................................................24200.408000000000000000000000000000000000000000000000000000000000000008
..............................................................A-----------------A---AAAAAAAAAAAAAAA--------------------A------A................................................................................................................................19200.204000000000000000000000400000000000000000000000000000000000000000
droMoj3
CTGGGCGAGGGCACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAACGGTAAGTACAATGAAATACCGAAAAATTTTATGATCTATATATAAATG--CAAATAATAATAAAATTGTT---------C----G--------------------CAAATACCC--AT-----T----------------------CGATTCACAGTGATTTTTGCATGGCCTTGAAGATCATCAAGAATGTTGAAAAATATCGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........GGGCACTTTCGGACGTGT.....................................................................................................................................................................................................................................1812.002000002
..........GCACTTTCGGACGTGTGGTC.................................................................................................................................................................................................................................2012.002100001
..............................................................................................................................................................................................................GATTTTTGCATGGCCTTGA..............................1911.001100000
..........GCACTTTCGGACGTGTGGTCAAGGT............................................................................................................................................................................................................................2511.001000001
......GAGGGCACTTTCGGACGTGT.....................................................................................................................................................................................................................................2011.001000001
...............TTCGGACGTGTGGTCAAGGTCAAAGAC.....................................................................................................................................................................................................................2711.001000001
.........GGCACTTTCGGACGTGTGGTC.................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................GCATGGCCTTGAAGATCATCAAGA..................2411.001100000
droGri2
TTGGGCGAGGGCACCTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTTCAATGAAA-------------------CCA---T-----------------------------TTCTTCGAAGTT-----------A--------CTCTAATTACA--CT-TTTTTCTCTAATGC---------------ATTCACAGTGATTTTTGCATGGCCTTGAAGATCATCAAGAATGTTGAGAAATATCGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
TTGGGCGAGGGCACCTTCGGACGTGTG....................................................................................................................................................................................................................................2711.00101
droWil2
TTGGGCGAAGGTACATTCGGACGAGTGGTCAAGGTGAAAGACATGGAGCGGTAAGTGTTA-------------------------------------------------------------------------ATCATTCTTCTCCTGCTTAAGACAACTTTT--AA-TTAATTTTTAATTAATCAATTC---CTTTTTCCACAGTGACTACTGCATGGCCCTGAAAATCATAAAAAATGTGGAAAAATATCGTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........AGGTACATTCGGACGAGTGGT..................................................................................................................................................................................................................................2115.00500500
........AGGTACATTCGGACGAGTGGTC.................................................................................................................................................................................................................................2213.00300300
.............................CAAGGTGAAAGACATGGAGCGT............................................................................................................................................................................................................2213.00300120
.............................CAAGGTGAAAGACATGGAGC..............................................................................................................................................................................................................2013.00300210
..........................GGTCAAGGTGAAAGACATGGAGC..............................................................................................................................................................................................................2313.00300300
..........................GGTCAAGGTGAAAGACATGGAGCGT............................................................................................................................................................................................................2512.00200200
.........................................................................................................................................................................................................................GGCCCTGAAAATCATAAAAAATGTGGA...........2711.00101000
...................GACGAGTGGTCAAGGTGAAAGA......................................................................................................................................................................................................................2211.00100100
..............................AAGGTGAAAGACATGGAGCGT............................................................................................................................................................................................................2111.00100001
.....................CGAGTGGTCAAGGTGAAA........................................................................................................................................................................................................................1811.00100010
...................GACGAGTGGTCAAGGTGAAAGACA....................................................................................................................................................................................................................2411.00100001
................TCGGACGAGTGGTCAAGGTGAAA........................................................................................................................................................................................................................2311.00110000
................TCGGACGAGTGGTCAAGGT............................................................................................................................................................................................................................1911.00110000
.................................GTGAAAGACATGGAGCGT............................................................................................................................................................................................................1811.00100100
................................GGTGAAAGACATGGAGCGT............................................................................................................................................................................................................1911.00100100
.........GGTACATTCGGACGAGTGGTCAAGGT............................................................................................................................................................................................................................2611.00100100
...............TTCGGACGAGTGGTCAAGGTG...........................................................................................................................................................................................................................2111.00101000
................TCGGACGAGTGGTCAAGGTGAAAGAC.....................................................................................................................................................................................................................2611.00110000
...........TACATTCGGACGAGTGGTCAAGGTG...........................................................................................................................................................................................................................2511.00100010
........AGGTACATTCGGACGAGT.....................................................................................................................................................................................................................................1811.00100010
.......AAGGTACATTCGGACGAGT.....................................................................................................................................................................................................................................1911.00101000
......GAAGGTACATTCGGACGAGTGGTCAAGGT............................................................................................................................................................................................................................2911.00100100
dp5
CTCGGCGAGGGCACTTTCGGACGTGTGGTCAAAGTCAAAGACATGGAGCGGTAAGTCCTCGAA-----------------T---CTAGCCTCTAGCCCT--------------------G------TAACTA-----------A---------TCTAATGCCC--TT--CTCC------------------------CTTTTCAGTGATTACTGCATGGCCTTAAAGATTATCAAGAATGTGGAAAAGTATCGCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........GGGCACTTTCGGACGTGT.....................................................................................................................................................................................................................................1812.0020100001000
........GGGCACTTTCGGACGTGTGGTC.................................................................................................................................................................................................................................2212.0020110000000
..................................................................................................................................................................................................................ACTGCATGGCCTTAAAGATTATCA.....................2411.0010100000000
................TCGGACGTGTGGTCAAAGTCAAAGACA....................................................................................................................................................................................................................2711.0010000000010
............................................................................................................................................................................................................GTGATTACTGCATGGCCTTAAAGAT..........................2511.0010100000000
...........................GTCAAAGTCAAAGACATGG.................................................................................................................................................................................................................1911.0010100000000
........GGGCACTTTCGGACGTGTG....................................................................................................................................................................................................................................1911.0010000001000
..........................GGTCAAAGTCAAAGACATGGAGCGT............................................................................................................................................................................................................2511.0010100000000
.........................................................................................................................................................................................................................GGCCTTAAAGATTATCAAGAATGTGGA...........2711.0010100000000
......GAGGGCACTTTCGGACGTGTG....................................................................................................................................................................................................................................2111.0010000000001
..............................................................................................................................................................................................................GATTACTGCATGGCCTTAAAG............................2111.0010100000000
......GAGGGCACTTTCGGACGTGTGGT..................................................................................................................................................................................................................................2311.0010000100000
droPer2
CTCGGCGAGGGCACATTCGGACGTGTGGTCAAAGTAAAAGACATGGAGCGGTAAGTACTCGAA-----------------T---CTAGGCC----------------------------T------CTAGCC-----------CTGTA-----ACTAATGCCC--T--TCTCC------------------------CTTTTCAGTGATTACTGCATGGCCTTAAAGATTATCAAGAATGTGGAAAAGTATCGCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................ATTATCAAGAATGTGGAAAAGTA.....2311.001000001
.................................................................................................................................................................................................................TACTGCATGGCCTTAAAGAT..........................2011.001010000
droAna3
CTGGGCGAGGGTACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTCTGATTACCCACTGG-------------CGGTGGT-----------------------------TACAGTGGAGCA-----------A---------CCCAACATAATGT--TCTATTTTTA-------------------ACTTCCAGTGATTACTGCATGGCCCTGAAGATTATAAAGAACGTGGAAAAGTACCGCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........GGGTACTTTCGGACGTGTGGTC.................................................................................................................................................................................................................................2212.002100010
...............TTCGGACGTGTGGTCAAGGTCAAAG.......................................................................................................................................................................................................................2512.002200000
...........................GTCAAGGTCAAAGACATGGAGC..............................................................................................................................................................................................................2211.001000001
...................GACGTGTGGTCAAGGTCAAAGACA....................................................................................................................................................................................................................2411.001100000
.........................................................................................................................................................................................................................GGCCCTGAAGATTATAAAGAACGT..............2411.001000010
.........................................................................................................................................................................................................................GGCCCTGAAGATTATAAAGG..................2011.001000001
...GGCGAGGGTACTTTCGGACGTGT.....................................................................................................................................................................................................................................2311.001000010
....................ACGTGTGGTCAAGGTCAAA........................................................................................................................................................................................................................1911.001000001
.TGGGCGAGGGTACTTTCGGAC.........................................................................................................................................................................................................................................2111.001100000
..........GTACTTTCGGACGTGTGGTCAAGGT............................................................................................................................................................................................................................2511.001000010
.......................TGTGGTCAAGGTCAAAGACATGGAGCG.............................................................................................................................................................................................................2711.001000001
......................................................................................................................................................................................................................CATGGCCCTGAAGATTATA......................1911.001000001
..........................GGTCAAGGTCAAAGACATGGAGCGT............................................................................................................................................................................................................2511.001010000
...............................AGGTCAAAGACATGGAGCGTG...........................................................................................................................................................................................................2111.001000010
.......................................................................................................................................................................................................................ATGGCCCTGAAGATTATAAAGA..................2211.001000001
...........................GTCAAGGTCAAAGACATGG.................................................................................................................................................................................................................1911.001000010
droBip1
CTGGGCGAGGGTACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTCTGATTACTCATTGG-------------TAACTTT-----------------------------TACACTCAAGCA-----------A---------CCTAACACGATGT--TCTATTTTTA-------------------AATTCCAGTGATTACTGCATGGCCCTGAAGATTATAAAGAACGTGGAAAAGTACCGCGSizeHit CountTotal NormTotal
No Reads
droKik1
CTGGGCGAGGGAACTTTCGGACGTGTGGTTAAGGTGAAAGACATGGAGCGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTGGGCGAGGGAACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTTTAGTTA-----------------C---TTTTATATAAAGT-----------------------------AAACCA-----------A---------TGCTAAATTG--TT-TTAAT------------------------CCTTCCAGTGATTATTGCATGGCCTTAAAGATTATTAAGAACGTGGAAAAGTACCGCGSizeHit CountTotal NormTotal
No Reads
droEle1
CTGGGCGAGGGTACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGATCCTCTA-----------------T---TTGCAAATTTATT-----------------------------GAGGCC-----------TTATAT----CTTAAA--TC--TT-TCAAT------------------------TGTTTTAGTGATTACTGCATGGCCTTAAAGATCATTAAGAACGTGGAAAAGTACCGTGSizeHit CountTotal NormTotal
No Reads
droRho1
CTGGGAGAGGGAACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGATCCTCTA-----------------T---TTGTGAATTAATT-----------------------------AGAGCA-----------A---------TACAAAACGT--TC-TCAAT------------------------CGTTTCAGTGATTACTGCATGGCCTTAAAGATTATTAAGAACGTGGAAAAGTACCGTGSizeHit CountTotal NormTotal
No Reads
droBia1
CTGGGCGAGGGAACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTGAGTTTCCCTG-----------------C---TTTTCAATTACTT-----------------------------GAATCT-----------T---------TCTAAAACGT--TTCTTTGT---T--------------------GACTCTAGTGATTACTGCATGGCCTTGAAGATTATTAAGAACGTGGAGAAGTACCGCGSizeHit CountTotal NormTotal
No Reads
droTak1
CTGGGCGAGGGAACTTTCGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTTTTTATA-----------------CGTTTTGTAAATTAATT-----------------------------AAAGTA-----------A---------TCTAAGTCAC--TTATAAAT------------------------TGTTTCAGCGATTATTGCATGGCCTTGAAGATTATTAAGAACGTGGAGAAGTACCGCGSizeHit CountTotal NormTotal
No Reads
droEug1
CTGGGTGAGGGAACCTTTGGACGTGTGGTCAAGGTCAAAGACATGGAGCGGTAAGTTCTGAAG-----------------T---TCTTGAATCAATC-----------------------------GAAATA-----------A--TA-----CATAAAACTT--TCCTT-CA------------------------TGTTTCAGTGATTACTGCATGGCCTTGAAGATTATTAAGAACGTGGAAAAGTACCGTGSizeHit CountTotal NormTotal
No Reads
dm3
CTGGGCGAGGGAACTTTTGGACGTGTGGTCAAGGTCAAAGATATGGAGCGGTAAGAATTTCCA-----------------T---ACAAGAAATAAAATA--------------------T------TAAGTA-----------C---------TTTAACCGCC--CT-TTTAT------------------------CGTTTTAGTGATTACTGCATGGCTTTAAAGATTATTAAGAACGTGGAAAAGTACCGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......GAGGGAACTTTTGGACGTGTGGTC.................................................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000
....................ACGTGTGGTCAAGGTCAAAGA......................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GACGTGTGGTCAAGGTCAAAGATATG..................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000200000000000000000000001100000000000
....................ACGTGTGGTCAAGGTCAAAG.......................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACGTGTGGTCAAGGTCAAAGATA....................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGGACGTGTGGTCAAGGTCAAAGA......................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................ATTACTGCATGGCTTTAAAGATTATT......................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGTGGTCAAGGTCAAAGATATGGAG...............................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GATTATTAAGAACGTGGAA..........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............TTTGGACGTGTGGTCAAGGTCA..........................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................ATTACTGCATGGCTTTAAAG............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACGTGTGGTCAAGGTCAAAGATATGG.................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACTTTTGGACGTGTGGTC.................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACGTGTGGTCAAGGTCAAAGATATGGAGC..............................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAGGTCAAAGATATGGAGCG.............................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAAGATTATTAAGAACGTGGAAAAG.......2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTGGGCGAGGGAACTTTTGGACGT.......................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGTGGTCAAGGTCAAAGATATG..................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CGAGGGAACTTTTGGACGT.......................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
...........AACTTTTGGACGTGTGGTC.................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000
.......................TGTGGTCAAGGTCAAAGATATGGAGC..............................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTTGGACGTGTGGTCAAGGTCAAAG.......................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GTGTGGTCAAGGTCAAAGATATGGA................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................ATTACTGCATGGCTTTAAAGAT..........................2212.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TAAAGATTATTAAGAACGTGGAAAAG.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GGACGTGTGGTCAAGGTCAA.........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................AGAACGTGGAAAAGTACCG..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................GTCAAAGATATGGAGCGT............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TAAAGATTATTAAGAACGT..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GGTCAAGGTCAAAGATATGGAG...............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........GAACTTTTGGACGTGTGGTCAAG..............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CAAGGTCAAAGATATGGAGC..............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTTTGGACGTGTGGTCAAGGTCAAAGAT.....................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTGGGCGAGGGAACTTTTGGA..........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AACTTTTGGACGTGTGGT..................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.....CGAGGGAACTTTTGGACGTGTGGTC.................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACGTGTGGTCAAGGTCAAAGATAT...................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTGGGCGAGGGAACTTTTGGACG........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TA-----------C---------TTTAACCGCC--CT-TTTAT------------------------CG........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTTTGGACGTGTGGTCAAGGTC...........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GACGTGTGGTCAAGGTCAAAG.......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................GCTTTAAAGATTATTAAGAACGTGGA...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........GAACTTTTGGACGTGTGGTCAA...............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTCAAGGTCAAAGATATGG.................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................AAAGATTATTAAGAACGT..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AAGTA-----------C---------TTTAACCGCC--CT-TTTAT------------------------CGT.......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....GCGAGGGAACTTTTGGAC.........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
..........GAACTTTTGGACGTGTGG...................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................ACGTGTGGTCAAGGTCAAA........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TTTAAAGATTATTAAGAACGTGGA...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........AACTTTTGGACGTGTGGTCAAGGT............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................ACCGCC--CT-TTTAT------------------------CGTTTTAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TTAAAGATTATTAAGAACGTGGAAAAG.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TTTAACCGCC--CT-TTTAT------------------------CGTTTTAGT.................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............TTTGGACGTGTGGTCAAGGT............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................TTATTAAGAACGTGGAAAAGTACCGC.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GACGTGTGGTCAAGGTCAAA........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................ATGGCTTTAAAGATTATTAAGAACGTG.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GATTACTGCATGGCTTTAAAG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................TAAAGATTATTAAGAACGTG.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................GGACGTGTGGTCAAGGTCAAA........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGTCAAAGATATGGAGCGT............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TGCATGGCTTTAAAGATTATTAAG...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AACTTTTGGACGTGTGGTCAAG..............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAGGTCAAAGATATGGAGC..............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GACGTGTGGTCAAGGTCA..........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GACGTGTGGTCAAGGTCAAAGA......................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
........................GTGGTCAAGGTCAAAGATATGGAGCT.............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACTTTTGGACGTGTGGTCAA...............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACGTGTGGTCAAGGTCAAAGATATGGA................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........GAACTTTTGGACGTGTGGTCAAGGT............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TTACTGCATGGCTTTAAA.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTGGACGTGTGGTCAAGGTCAAAG.......................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGGACGTGTGGTCAAGGTC...........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................GGACGTGTGGTCAAGGTCAAAGAT.....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGCGAGGGAACTTTTGGACGTGTGGT..................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................CAAGGTCAAAGATATGGAGCGT............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................TTAACCGCC--CT-TTTAT------------------------CGTTTTAG..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACGTGTGGTCAAGGTCAAAGATATGGAG...............................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GGAACTTTTGGACGTGTGGTCAA...............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGGACGTGTGGTCAAGGTCAAAG.......................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GACGTGTGGTCAAGGTCAAAGATA....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTTGGACGTGTGGTCAAGGTCAAAGA......................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GATTATTAAGAACGTGGA...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGGTCAAAGATATGGAGC..............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................ATTAAGAACGTGGAAAAG.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........AACTTTTGGACGTGTGGTCAAGG.............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGGTCAAGGTCAAAGATATGGAGCGT............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................AGAACGTGGAAAAGTACC...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................GTGGTCAAGGTCAAAGATATGGAGCGT............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGGACGTGTGGTCAAGGTCAAAGATA....................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GGTCAAGGTCAAAGATATG..................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTTGGACGTGTGGTCAAGGTC...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCAAGGTCAAAGATATGGAGCGT............................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................AAGGTCAAAGATATGGAGCGT............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CTGGGCGAGGGAACTTTTGGACGTGTGGTCAAGGTCAAAGATATGGAGCGGTAAGATTTTCCA-----------------T---ACAAGAACTAAAAGA--------------------T------TAAGTA-----------C---------TTTAACCGCC--CT-TTCAT------------------------TGTTTCAGTGATTACTGTATGGCTTTAAAGATTATAAAGAACGTGGAAAAGTACCGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................TTTAAAGATTATAAAGAACGTGGAAAA........2712.00200000000000002000
.............................................................................................................................................................................................................TGATTACTGTATGGCTTTAAAGATTA........................2611.00100000000001000000
..........................................................................................................................................................................................................................GCTTTAAAGATTATAAAGAACG...............2211.00100000000001000000
...............................................................................................................................................................................................................................AAAGATTATAAAGAACGTGGAAAAGT......2611.00100000001000000000
..............TTTTGGACGTGTGGTCAAGGTCG..........................................................................................................................................................................................................................2311.00101000000000000000
.............................................................CA-----------------T---ACAAGAACTAAAAGA--------------------T------TAAGTA-----------C---------T.....................................................................................................2711.00110000000000000000
....................................................................................................................................................................................................................TGTATGGCTTTAAAGATTATAAAGA..................2511.00100000001000000000
...................GACGTGTGGTCAAGGTCAAAGATA....................................................................................................................................................................................................................2411.00100000000010000000
.TGGGCGAGGGAACTTTTGGACGTGTGGT..................................................................................................................................................................................................................................2811.00100000000100000000
................................................................................................................................................................................................................TTACTGTATGGCTTTAAAGATTATAAAG...................2811.00100000000100000000
droSec2
CTGGGCGAGGGAACTTTTGGACGTGTGGTCAAGGTCAAAGATATGGAGCGGTAAGAATTTCCA-----------------T---ACAAGAAATAAAAGA--------------------T------TAAGTA-----------C---------TTTAACCGCC--TT-TTCAT------------------------TGTTTCAGTGATTACTGTATGGCTTTAAAGATTATAAAGAACGTGGAAAAGTACCGCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................TTGGACGTGTGGTCAAGGTCA..........................................................................................................................................................................................................................2111.0010100
................................................................................................................................................................................................................................AAGATTATAAAGAACGTGG............1911.0010010
..............................AAGGTCAAAGATATGGAGC..............................................................................................................................................................................................................1911.0010010
..........GAACTTTTGGACGTGTGGT..................................................................................................................................................................................................................................1911.0010010
...............TTTGGACGTGTGGTCAAGGTCAAAG.......................................................................................................................................................................................................................2511.0010100
.TGGGCGAGGGAACTTTTGGAC.........................................................................................................................................................................................................................................2111.0010010
..............TTTTGGACGTGTGGTCAAGGT............................................................................................................................................................................................................................2111.0010010
droYak3
CTGGGCGAAGGAACTTTTGGACGTGTGGTCAAGGTCAAAGATATGGAGCGGTAAGATTTACCA-----------------T---CTATGAAGTATAAGT--------------------A------TAAGCA-----------A---------TCTAACGCCC--TT-TTCAT------------------------TGTTTCAGTGATTACTGCATGGCCTTAAAGATTATTAAGAACGTGGAAAAGTACCGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............TTTGGACGTGTGGTCAAGGTCA..........................................................................................................................................................................................................................2214.00401000030000
.............CTTTTGGACGTGTGGTCAAG..............................................................................................................................................................................................................................2011.00100000010000
................................................................................................................................................................................................................................AAGATTATTAAGAACGTGGAAAA........2311.00100000010000
......GAAGGAACTTTTGGACGTGTGGTC.................................................................................................................................................................................................................................2411.00100000010000
..........GAACTTTTGGACGTGTGGTC.................................................................................................................................................................................................................................2011.00100000010000
..........................GGTCAAGGTCAAAGATATGGAGCGT............................................................................................................................................................................................................2511.00101000000000
.................................................................................................................................................................................................................................AGATTATTAAGAACGTGGAAA.........2111.00100000010000
..............................................................................................................................................................................................................................TAAAGATTATTAAGAACGTG.............2011.00100000010000
........AGGAACTTTTGGACGTGTGGTC.................................................................................................................................................................................................................................2211.00100000010000
..........GAACTTTTGGACGTGTGGTCAA...............................................................................................................................................................................................................................2211.00100000010000
.................................GTCAAAGATATGGAGCGTG...........................................................................................................................................................................................................1920.50100010000000
droEre2
CTGGGCGAAGGAACTTTTGGACGTGTGGTCAAGGTCAAAGATATGGAGCGGTAAGAACTACCA-----------------T---CTAAGTAATATAATG--------------------T------AATATA-----------A---------TCTAACGCCC--TT-TTCAT------------------------CGTTTCAGTGATTACTGCATGGCCTTAAAGATTATTAAGAACGTGGAAAAGTACCGCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................TGTGGTCAAGGTCAAAGATATGGAGCG.............................................................................................................................................................................................................27129.002900000029
...............TTTGGACGTGTGGTCAAGGTCA..........................................................................................................................................................................................................................2211.0011000000
..............................................................................................................................................................................................................................TAAAGATTATTAAGAACGTGGAAAAG.......2611.0011000000
...............................AGGTCAAAGATATGGAGCGT............................................................................................................................................................................................................2011.0010100000
..............................AAGGTCAAAGATATGGAGCGT............................................................................................................................................................................................................2111.0010001000
..........GAACTTTTGGACGTGTGGTC.................................................................................................................................................................................................................................2011.0010000010
CTGGGCGAAGGAACTTTTGGACGTGT.....................................................................................................................................................................................................................................2611.0010000100
.........................TGGTCAAGGTCAAAGATATGGAG...............................................................................................................................................................................................................2311.0011000000

Generated: 05/17/2015 at 04:18 AM