ID:

dvi_168

 Coordinate:

scaffold_13050:3236328-3236385 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.6

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. scaffold_13050:3208028-3208050 -
  2. dvi_179  scaffold_13050:3213733-3213755 -
  3. dvi_168  scaffold_13050:3236328-3236350 -
  4. dvi_171  scaffold_13050:3253946-3253968 -
star
  1. scaffold_13050:3208056-3208080 -
  2. dvi_179  scaffold_13050:3213761-3213785 -
  3. dvi_168  scaffold_13050:3236356-3236380 -
  4. dvi_171  scaffold_13050:3253974-3253998 -

Sense Strand Reads

TTGGAAAACCGAGCTGCGGAGAACCTTGCGCATCCTTTAGCTCTTTGATGGTAACCAGGATGGTTGCAATTGCGGCATTTAGTGCTGCAATGGACTGCTGGAAGCCTTGAAGGATGCTTCCAAGGGACGCGTCTTGCTCCTGAGGTCCTTGCTGTGGT
****************************************..........(((((((...))))))).((((((((((...)))))))))).......(((((((.((....)).))))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 M047
female body
 SRR060675
140x9_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060674
9x140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060654
160x9_ovaries_total
 M027
male body		 SRR060658
140_ovaries_total
 SRR060673
9_ovaries_total
 GSM1528803
follicle cells		 SRR060662
9x160_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060678
9x140_testes_total
 SRR060680
 9xArg_testes_total
 SRR060681
Argx9_testes_total
 SRR060661
160x9_0-2h_embryos_total
 V047
embryo
 SRR060679
140x9_testes_total
 M028
head
 SRR060670
9_testes_total
 SRR060683
160_testes_total
 SRR1106717
embryo_6-8h
 SRR060667
160_females_carcasses_total
 V053
head
 V116
male body
.....................................TAGCTCTTTGATGGTAACCAGGATGG............................................................................................... 26 0 3 139.33 418 80 85 35 44 21 25 18 28 14 10 6 13 0 6 11 0 5 1 0 4 3 2 1 2 2 1 0 1 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGATG................................................................................................ 25 0 3 53.33 160 22 31 22 20 10 8 13 8 5 1 2 4 0 1 2 0 1 1 3 0 1 2 1 0 1 0 0 0 1 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGATGGT.............................................................................................. 27 0 3 24.00 72 14 17 7 9 3 3 5 1 2 1 1 0 0 0 0 3 3 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTT.................................................. 23 0 4 19.25 77 12 9 12 11 1 1 4 4 6 1 7 4 0 1 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTG................................................. 24 0 4 15.00 60 9 4 11 5 0 2 0 3 2 1 2 1 0 10 2 0 1 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGAT................................................................................................. 24 0 3 14.67 44 4 8 9 2 6 3 4 2 4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTGAAG.............................................. 27 0 4 14.00 56 11 10 3 5 2 0 3 5 4 5 2 2 0 0 0 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTGAA............................................... 26 0 4 11.50 46 5 5 17 6 2 0 0 5 1 1 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCT................................................... 22 0 4 11.25 45 1 3 4 1 0 1 0 2 0 2 1 1 26 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTGA................................................ 25 0 4 10.75 43 7 6 18 4 1 2 1 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGAAGGAT........................................... 26 0 3 9.67 29 9 0 0 0 6 2 4 0 0 6 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGAAGGA............................................ 25 0 3 8.33 25 9 0 0 0 2 5 4 0 0 3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGATGGTT............................................................................................. 28 0 3 4.67 14 2 3 0 7 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGAAG.............................................. 23 0 4 4.25 17 3 0 1 0 5 2 2 0 0 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGAAGG............................................. 24 0 4 3.50 14 3 0 0 0 2 3 2 0 0 2 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGATGGTC............................................................................................. 28 1 3 3.33 10 3 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGA.................................................................................................. 23 0 3 3.33 10 2 1 1 1 1 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGAAGGATG.......................................... 27 0 3 3.33 10 3 0 0 0 2 0 2 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGAAGGATGCTTCCAAGGGACGCGT.......................... 26 0 3 3.00 9 0 1 0 0 0 0 0 0 1 0 2 2 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCC.................................................... 21 0 4 3.00 12 1 1 3 2 0 1 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGG................................................................................................... 22 0 3 2.67 8 0 2 4 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGC..................................................... 20 0 4 1.50 6 2 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGATC................................................................................................ 25 1 3 1.33 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................CTAGCTCTTTGATGGTAACCAGGATGG............................................................................................... 27 1 3 1.33 4 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CAATGGACTGCTGGAAGCCTTGAAG.............................................. 25 0 4 1.25 5 0 1 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TCCAAGGGACGCGTCTTGCTCC.................. 22 0 2 1.00 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGAAGGATGCTTCCAAGGGACGC............................ 24 0 3 1.00 3 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................AGCTCTTTGATGGTAACCAGGATGGTC............................................................................................. 27 1 3 1.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGAAGGATGCTTCCAAGGGACG............................. 23 0 3 1.00 3 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TCCTGAGGTCCTTGCTGTGG. 20 0 4 0.75 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTGAAA.............................................. 27 1 4 0.75 3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCG................................................... 22 1 4 0.75 3 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGAA............................................... 22 0 4 0.75 3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGACTGCTGGAAGCCTTGAAGGATGC......................................... 27 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGATGGA.............................................................................................. 27 1 3 0.67 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................AGCTCTTTGATGGTAACCAGGATG................................................................................................ 24 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................GACTGCTGGAAGCCTTGAAGGATGC......................................... 25 0 3 0.67 2 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGAAGGATGC......................................... 28 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................AGCTCTTTGATGGTAACCAGGA.................................................................................................. 22 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAG.................................................................................................... 21 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................GCTTCCAAGGGACGCGTCTTGCTCC.................. 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GCAATGGACTGCTGGAAGCCTTG................................................. 23 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GCAATGGACTGCTGGAAGCCTTGAA............................................... 25 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAG...................................................... 19 0 4 0.50 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGAAGGATGCTTCCAAGGGACGCGTC......................... 27 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTT................................................. 24 1 4 0.50 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TCCTGAGGTCCTTGCTGTGGT 21 0 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GGAAGGATGCTTCCAAGGGACGCGTC......................... 26 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTCCAAGGGACGCGTCTTGCTC................... 22 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGAAGGATGCTTCCACGGGACGCCTC......................... 27 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACC...................................................................................................... 19 0 4 0.50 2 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCC................................................... 22 1 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGA................................................ 21 0 4 0.50 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGAAGGATGCTTCCAAGGGACGCCTC......................... 27 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTGAAGG............................................. 28 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGATCTTTGATGGTAACCAGGATGG............................................................................................... 26 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGAAGGATGCTTCCAAGGGACGCGT.......................... 25 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CATGGACTGCTGGAAGCCTTGAAGGAT........................................... 27 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGGACTGCTGGAAGCCTTGAAGGATG.......................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCCGGATGGT.............................................................................................. 27 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTGACCAGGATGG............................................................................................... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGATAACCAGGATGG............................................................................................... 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCACGATGGAA............................................................................................. 28 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGAAGGATGCTTCCAAGGGAC.............................. 22 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGATGGTA............................................................................................. 28 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCCGGATGG............................................................................................... 26 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................AGCTCTTTGATGGTAACCAGGATC................................................................................................ 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCAGGAAGCCTTGAAGGAGC.......................................... 31 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAAACAAGATGG............................................................................................... 26 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................CTTTGATGGTAACCAGGATGGT.............................................................................................. 22 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGATTG............................................................................................... 26 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................CTTTGATGGTAACCAGGATGG............................................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................CTAGCTCTTTGATGGTAACCAGGATG................................................................................................ 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCAGGAAGCCTTGAAGGA............................................ 25 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGCTGGTG............................................................................................. 28 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGAAGGATGCTTCCAAGGGACGCG........................... 25 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TATCTCTTTGATGGTAACCAGGATGG............................................................................................... 26 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................AGCTCTTTGATGGTAACCAGGAT................................................................................................. 23 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................CTAGCTCTTTGATGGTAACCAGGATAG............................................................................................... 27 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCCGGATC................................................................................................ 25 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................AGCTCTTTGATGGTAACCAGGATGG............................................................................................... 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCATGATGG............................................................................................... 26 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACAAGGATGGT.............................................................................................. 27 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TACCTCTTTGATGGTAACCAGGAT................................................................................................. 24 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTTTTTGATGGTAACCAGGATGG............................................................................................... 26 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................CAGCTCTTTGATGGTAACCAGGATGG............................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................ATCTAGCTCTTTGATGGTAACCAGGATGG............................................................................................... 29 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TTAGCTCTTTGATGGTAACCAGGATGGTC............................................................................................. 29 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................TAGCTTTGATGGTAACCAGGATGGT.............................................................................................. 25 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGATGGAA............................................................................................. 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGAAGGAA........................................... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAACTCTTTGATGGTAACCAGGATG................................................................................................ 25 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGAAGGATGCTTCCAAGGG................................ 20 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CTCTTTGATGGTAACCAGGAT................................................................................................. 21 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTGGATGGTAACCAGGATG................................................................................................ 25 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCCTTGATGGTAACCAGGATGG............................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................CTTTAGCTCTTTGATGGTAACCAGGAT................................................................................................. 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCGGGATGG............................................................................................... 26 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCCCTTTGATGGTAACCAGGATGG............................................................................................... 26 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGGATGGC.............................................................................................. 27 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................GACTGCTGGAAGCCTTGAAGGATGCT........................................ 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGATAACCAGGAT................................................................................................. 24 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTCACCAGGATGG............................................................................................... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGTGGACTGCTGGAAGCCT................................................... 22 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAATA..................................................... 20 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GCAATGGACTGCTGGAAGC..................................................... 19 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TTGCGCATCCTTTAGCTCTTTGATGG........................................................................................................... 26 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATAGACTGCTGGAAGCCTT.................................................. 23 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................CTGCAATGGACTGCTGGAAGCCT................................................... 23 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATAGTAACC...................................................................................................... 19 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGTGGACTGCTGGAAGCCTTG................................................. 24 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGCAGCCTTGAAG.............................................. 27 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGTCTTGCA............................................... 26 2 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TGCAATTGCGGCATTTAGTG.......................................................................... 20 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACCGCTGGAAGCCTTGAAG.............................................. 27 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TTAGCTCTTTGATGGTAACC...................................................................................................... 20 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTAGTGCTGCAATGGACTGCTGGAAG...................................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTGAAT.............................................. 27 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTC.................................................. 23 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGGAGCCTTG................................................. 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGTACTGCTGGAAGCCTT.................................................. 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TCCAATGGACTGCTGGAAGCC.................................................... 21 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTG................................................. 20 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTAGAAGCCTTG................................................. 24 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAA....................................................... 18 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATCGACTGCTGGAAGCCTTGAAG.............................................. 27 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGCAGCCTT.................................................. 23 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGAAGAG............................................ 25 2 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................GCTGGAAGCCTTGAAGGA............................................ 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGAGGGGTGCTTCCAAGGGACGCGT.......................... 26 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCA..................................................................................................... 20 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGTATGG............................................................................................... 26 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GCAATGGACTGCTGGAAGCCTTGAAG.............................................. 26 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GCAATGGACTGCTGGAAGCCTT.................................................. 22 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TCCAATGGACTGCTGGAAGCCTT.................................................. 23 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTGG................................................ 25 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GCAATGGACTGGTGGAAGCCTTGAAGG............................................. 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTC................................................. 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CGCATCCTTTAGCTCTTTGATGGTAA........................................................................................................ 26 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAACCAGCATGG............................................................................................... 26 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTAGTGCTGCAATGGACTGCTGGAAG...................................................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGTACTGCTGGAAGC..................................................... 20 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTGCA............................................... 26 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTGGAAAACCGAGCTGCGGAGAACC..................................................................................................................................... 25 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGCA............................................... 22 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGAAGCCTTGAACC............................................. 28 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................ATGGACTGCTGGAAGCCTTGAAGGT............................................ 25 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAGGATGGTTGCAATTGCGGCATTT.............................................................................. 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTTATGGTAACCAGGATG................................................................................................ 25 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TGCGGAGAACCTTGCGCATCCTTTAGC..................................................................................................................... 27 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTAGTGCTGCAATGGACTGCTG.......................................................... 23 0 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GGATGGGTGCAAGGGACGCGT.......................... 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....AAAACAGAGCTGGGGGGAAC...................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................TGCAATGGACTGCTGGAGGCCTTGAA............................................... 26 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAGCTCTTTGATGGTAAAAAA.................................................................................................... 21 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTTCGTATCCTTTAGCTCT.................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................TTCGGATCCCTTAGCTCT.................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAATGGACTGCTGGTC....................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................GAAGGATGCCTCCAAGGGGCGCGTC......................... 25 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................AGTGCTGCAATGGACTGCTGT......................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AACCTTTTGGCTCGACGCCTCTTGGAACGCGTAGGAAATCGAGAAACTACCATTGGTCCTACCAACGTTAACGCCGTAAATCACGACGTTACCTGACGACCTTCGGAACTTCCTACGAAGGTTCCCTGCGCAGAACGAGGACTCCAGGAACGACACCA
***********************************..........(((((((...))))))).((((((((((...)))))))))).......(((((((.((....)).))))))).**************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060676
9xArg_ovaries_total
 M047
female body
 SRR060673
9_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060688
160_ovaries_total
 M027
male body		 SRR060684
140x9_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060683
160_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060679
140x9_testes_total
 SRR060655
9x160_testes_total
 SRR060680
 9xArg_testes_total
 SRR060678
9x140_testes_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 M061
embryo
 SRR060689
160x9_testes_total
...........................CGCGTAGGAAATCGAGAAAC............................................................................................................... 20 0 4 13.75 55 6 3 8 9 2 3 4 7 2 0 2 2 1 0 1 0 0 2 0 0 2 1 0 0 0 0 0
........................GAACGCGTAGGAAATCGAGAAAC............................................................................................................... 23 0 4 9.00 36 8 4 4 2 2 0 4 2 4 0 0 1 0 1 0 1 2 0 0 0 0 0 1 0 0 0 0
.......................GGAACGCGTAGGAAATCGAGAAAC............................................................................................................... 24 0 4 5.25 21 2 9 0 4 2 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CGAGGACTCCAGGAACGACA... 20 0 4 3.00 12 2 1 0 0 1 2 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0
....................CTTGGAACGCGTAGGAAATCGAGAAAC............................................................................................................... 27 0 4 2.75 11 3 0 0 2 0 2 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................ACGCCGTAAATCACGACGTTACCTG............................................................... 25 0 4 2.00 8 1 0 0 3 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GAACGAGGACTCCAGGAACGACA... 23 0 2 2.00 4 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................AACGCGTAGGAAATCGAGAAAC............................................................................................................... 22 0 4 1.75 7 2 0 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CGCCGTAAATCACGACGTTACCTG............................................................... 24 0 4 1.50 6 1 2 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................CGTAGGAAATCGAGAAAC............................................................................................................... 18 0 4 1.50 6 2 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................ACGCGTAGGAAATCGAGAAAC............................................................................................................... 21 0 4 1.50 6 1 1 0 0 1 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................TAACGCGTAGGAAATCGAGAAAC............................................................................................................... 23 1 4 1.25 5 3 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TACGCGTAGGAAATCGAGAAAC............................................................................................................... 22 1 4 1.25 5 1 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GCGTAGGAAATCGAGAAAC............................................................................................................... 19 0 4 1.25 5 0 1 0 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TGGAACGCGTAGGAAATCGAGAAAC............................................................................................................... 25 0 4 1.00 4 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................CGCAGAACGAGGACTCCAGGAACGACA... 27 0 2 1.00 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TTGGAACGCGTAGGAAATCGAGAAAC............................................................................................................... 26 0 4 0.75 3 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................AACGAGGACTCCAGGAACGACA... 22 0 4 0.75 3 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CCAGAACGAGGACTCCAGGAACGACA... 26 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................ACGAGGACTCCAGGAACGACA... 21 0 4 0.50 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTGCGCAGAACGAGGACTCCAG........... 22 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TTACGCGTAGGAAATCGAGAAAC............................................................................................................... 23 2 4 0.50 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................TTTGGAACGCGTAGGAAATCGAGAAAC............................................................................................................... 27 1 4 0.50 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CAGAACGAGGACTCCAGGAACGACA... 25 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CCTGCGCAGAACGAGGACTCCAG........... 23 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TCCAGAACGAGCACTCCAGGAACGACA... 27 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTAGAACGAGGACTCCAGGAACGACA... 26 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GACGACCTTCGGAACTTCCTAC.......................................... 22 0 4 0.50 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................AGAACGCGTAGGAAATCGAGAAAC............................................................................................................... 24 1 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CTAACGCGTAGGAAATCGAGAAAC............................................................................................................... 24 2 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................GACCGCGTAGGAAATCGAGAAAC............................................................................................................... 23 1 4 0.50 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................TGAACGCGTAGGAAATCGAGAAAC............................................................................................................... 24 1 4 0.50 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CTGACGACCTTCGGAACTTCCTAC.......................................... 24 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGCTTAGGAAATCGAGAAAC............................................................................................................... 20 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TAAAACGCGTAGGAAATCGAGAAAC............................................................................................................... 25 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................AACGCGTAGGAAATCCAGAAAC............................................................................................................... 22 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TGACGACCTTCGGAACTTCCTAC.......................................... 23 0 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGCGTAGTAAATCGAGAAAC............................................................................................................... 20 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CAACGTTAACGCCGTAAATCACGAC....................................................................... 25 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTAACGCCGTAAATCACGACGTTACCTG............................................................... 28 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TGCGTAGGAAATCGAGAAAC............................................................................................................... 20 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................TAACCCCGTAAATCACGACGTTACCTG............................................................... 27 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GACGCGTAGGAAATCGAGAAAC............................................................................................................... 22 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................AGCGTAGGAAATCGAGAAAC............................................................................................................... 20 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................GCCGTAAATCACGGCGTTACCTG............................................................... 23 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................GCACGCGTAGGAAATCGAGAAAC............................................................................................................... 23 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................CTAACGCCGTAAATCACGACGTTACCTG............................................................... 28 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................CACGCGTAGGAAATCGAGAAAC............................................................................................................... 22 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................AAACGCGTAGGAAATCGAGAAAC............................................................................................................... 23 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTACGAGGACTCCAGGAACGACA... 23 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ATGAACGCGTAGGAAATCGAGAAAC............................................................................................................... 25 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGCGTAGGAAATCGAGAAACTACC........................................................................................................... 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................ACGCGTAGGCAATCGAGAAAC............................................................................................................... 21 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................GAACGCGTAGGAAGTCGAGAAAC............................................................................................................... 23 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TTTTACGCGTAGGAAATCGAGAAAC............................................................................................................... 25 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGCGTAGGAAATCGAGAAACTACA........................................................................................................... 24 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GAGGACTCCAGGAACGACA... 19 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GAGCGTAGGAAATCGAGAAAC............................................................................................................... 21 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GGAACGCGTAGGAAATCGAGACAC............................................................................................................... 24 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CCGCGTAGGAAATCGAGAAAC............................................................................................................... 21 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................GCCGTAAATCACGACGTTACCTG............................................................... 23 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................GAACGCGTAGGACATCGAGAAAC............................................................................................................... 23 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................GAACGCGTAGGAAATCGAGAGAC............................................................................................................... 23 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TATGAACGCGTAGGAAATCGAGAAAC............................................................................................................... 26 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CGTGGACTCCAGGAACGACA... 20 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................AAATCACGACGTTACCTGACGA........................................................... 22 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGCGTAGGACATCGAGAAAC............................................................................................................... 20 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGCGTAGGAAATCGAGAAA................................................................................................................ 19 0 20 0.20 4 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................CGTAAATCACGACGTTACCTG............................................................... 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CCTCTTGGAACGCGTAGGAAATCGA.................................................................................................................... 25 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CCTCTTGGAACGCGTAGGAAATCG..................................................................................................................... 24 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CGCAGAACGAGGACTCCAGGAACG...... 24 0 17 0.12 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GCAGAACGAGGACTCCAG........... 18 0 17 0.12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................ATCACGACGTTACCTGACGA........................................................... 20 0 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................GGAACGCGCAGGAAATCGA.................................................................................................................... 19 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................AAAACGACGTTACCTGACGA........................................................... 20 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGCGCAGGAAATCGAGAAA................................................................................................................ 19 1 20 0.10 2 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................ACGCGTAGGAAATCGAGAAA................................................................................................................ 20 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TGGAACGCGTAGGAAATCGAGAAA................................................................................................................ 24 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CTCGACTCCTGTTGGTACG................................................................................................................................. 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CAGAACGAGGACTCCAGGA......... 19 0 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................GCAGAACGAGGACTCCAGGAACT...... 23 1 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CGCAGAACGAGGACTCCA............ 18 0 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AGAACGAGGACTCCAGGAAC....... 20 0 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................GCAGAACGAGGACTCCAGGA......... 20 0 17 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GCAGAACGAGGACTCCAGGAACG...... 23 0 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GCAGAACGAGGACTCCAGGAA........ 21 0 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................CGCAGAACGAGGACTCCAGGAAC....... 23 0 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........GCTCGACTCCTGTTGGTAC.................................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................GAACGCGTAGGAAATCGAG................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGCGTAGGAAATCGAGAAT................................................................................................................ 19 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................TTGGAACGCGTAGGAAATCGAGAA................................................................................................................. 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GGAACGCGCAGGAAATCTA.................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................AACGCCGTAAGTCACGACGTTACCTG............................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GGACCGCGTAGGAAATCG..................................................................................................................... 18 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGCGTAGGAAATCGAGAT................................................................................................................. 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................GGAACGCGTAGGAAATCG..................................................................................................................... 18 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TTATAACGCGTAGGAAATCGAG................................................................................................................... 22 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TTGGAACGCGTAGGAAATCGAGAAA................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TTGGAACGCGCAGGAAATC...................................................................................................................... 19 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................CTGGAACGCGTAGGAAATCGAGAAA................................................................................................................ 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GGAACGCGTAGGAAATCGAGAAAGC.............................................................................................................. 25 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..........................TTGCGTAGGAAATCGAGAAA................................................................................................................ 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................GAACGCGTAGGAAATCGAGAAT................................................................................................................ 22 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ATGGAACGCGTAGGAAATCGAGAAA................................................................................................................ 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................AAACGCGTAGGAAATCGAGAA................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GGAACGCGTAGGAAATCGA.................................................................................................................... 19 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GCGCAGGAAATCGAGAAT................................................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TGGAACGCGTAGGAAATCG..................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.......................GGAACGCGTAGGAAAGCGAGAAA................................................................................................................ 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TGGAACGCGCAGGAAATCG..................................................................................................................... 19 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................GAACGCGTAGGAAATCGAGAA................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GGAACGCGTAGGAAATCGAGAAAA............................................................................................................... 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TTTGGAACGCGTAGGAAATCGA.................................................................................................................... 22 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................AAAGCGTAGGAAATCGAGAAA................................................................................................................ 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TCGCGTAGGAAATCGAGAAA................................................................................................................ 20 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGCGTAGGAAATCGAGAAC................................................................................................................ 19 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TGGAACGCGCAGGAAATCGAGAAA................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13050:3236278-3236435 - dvi_168 TTGGAAAAC-------CGAGCTG-----CGGAG--------AACCTTGCGCATCCTTTAGCTCTTTGATGGTAACCAGGATGGT-TG---------CAATTGCGGCATTTAGTGCTGCAATGGACTGCTGGAAGC--CTTGAAGGATGCTTCCAAGGGACGCGTCTTGCTCCTGAGG---------------------------------------------------------------TCCTTGCTGTGGT
droGri2 scaffold_15110:16533119-16533145 - TCTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGGCTG---------------------------------------------------------------TTCTTGTTGCTGT
droWil2 scf2_1100000004961:4473099-4473176 - AACT----------------------------------------------------------CGTTGAAGATGGCCTGTTCGGT-GA---------CAGTCATAGCACACAGTGGTGCAATGTGCTGTTTGCAACGGCTTGGACGA-----------------------------------------------------------------------------------------------------------
droAna3 scaffold_13230:861930-861967 - GAAAAC---CC-------ATCTG-----TAGAG--------AACCCTGCGCCTCCTATAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302762:23645-23817 - TGGGGCAGT-------TG---------------CAACCGAGTGTTTCGGTCTATTTGTAGATCTCTTACGACAAGTGAGATTGTGTGCAAGCTGGTCTACCGTGTTTTTGAGTTCC--AA-GAGCATTTTCGTT-------ATATTGGAAAGATCCCAAGGTA-----CCAAA-----------------------------------------TTTTGGCCTCTCTCTTTTTGTGCA--TTATTATTGTGAC
droFic1 scf7180000454037:430-465 - TTAAC----------------TG-----GGAAA--------GATCCAGGGAATGCTTGAGC----------------------------------------------------------------------------------------------------------------------------TGTT----------------------------------------------------------------
droRho1 scf7180000779271:481-635 - TCAGAA---CCGTGACCAGTTCT-----CGAAA--------TGCTTTGTTTGCCTCCAAAGTTTCTTGAACCAGCTTAAATA--------ATTGGTCCATTCTTCCGTTGATCTCCCTTATGGAGTTCTCCAACG--CCCGGAATTTATTATCAGGCAGCACG-----TTTGG-------------------------------------------------------------------TTCTTGTTGGGTA
droBia1 scf7180000302187:636822-636856 + TTGAACGGC-------CGAGCTA-----CGGGG--------AACTTAATGCACCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415956:27297-27335 + TTAGAA---GC----------TC-----CAGGA--------GATTTTGAGTGCGCACAAGC----------------------------------------------------------------------------------------------------------------------------TCCT----------------------------------------------------------------
droSim2 2r:645905-646098 + GTCAACGAC-------T-----------AAAAACATCCGAGTTCTGTGATCTCCT---------------------CAAGTA--------GCTCAGCGATGGTTTTTTGGAGACCAGCAATGGACAACTGCATT-------GAGATGATGATTTGTTAGAATG-----TTGAGGTTGGCTTGCGTTTGTTACAGGAAGATCAGTATCTGGAATAGTCTGGTATCTTGCATTTGAGACAGAACTTCACTGCTGT
droSec2 scaffold_67:72234-72374 - AATTGC---GCT----GCGTCAACGACTTAAAACATCTGAGTTCTTTGATCTCCT---------------------CAAGTA--------GCTGAGCGATGGTTTTTTGGAGACCAGCAATGGACAGCTGCATT-------GAGATGATGATTTGTTAGAATG-----TTGAGGTTGGCTTGCGTTTGT----------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTGGAAAAC-------CGAGCTG-----CGGAG--------AACCTTGCGCATCCTTTAGCTCTTTGATGGTAACCAGGATGGT-TG---------CAATTGCGGCATTTAGTGCTGCAATGGACTGCTGGAAGC--CTTGAAGGATGCTTCCAAGGGACGCGTCTTGCTCCTGAGG---------------------------------------------------------------TCCTTGCTGTGGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................TAGCTCTTTGATGGTAACCAGGATGG..........................................................................................................................................................................263139.33418003501301060025400000010011254480853121180282114106000000000000000000002000
.........................................................TAGCTCTTTGATGGTAACCAGGATG...........................................................................................................................................................................25353.33160002204010103010000000000282022311021131810512000000000000000000001000
.........................................................TAGCTCTTTGATGGTAACCAGGATGGT-........................................................................................................................................................................27324.007200700010000031000000000039141701005013211000000000000000000000003
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTT.................................................................................................................23419.2577001204020100000000000000211112900004041617000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTTG................................................................................................................24415.006000110103010040100000000002259400000030212000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACCAGGAT............................................................................................................................................................................24314.6744009000000000000000000000324800004026402000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTTGAAG.............................................................................................................27414.005600302000001102000000000005111000003052452000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTTGAA..............................................................................................................26411.50460017010000010000000000002065500000052110000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CT..................................................................................................................22411.25452604010101000000000000000111300000020021000000100000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTTGA...............................................................................................................25410.75430018000000000000000000000247600001031010000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTGAAGGAT..........................................................................................................2639.6729000000000000200000000000209000004006060000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTGAAGGA...........................................................................................................2538.3325000000000000200000000000509000004002030000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACCAGGATGGT-T.......................................................................................................................................................................2834.6714000010000000000000000000072300000001000000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTGAAG.............................................................................................................2344.2517001000000000100000000000203000002005030000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTGAAGG............................................................................................................2443.5014000000000000000000000001303010002002020000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACCAGGATGGT-C.......................................................................................................................................................................2833.3310001010100000000000000000003210010000000000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACCAGGA.............................................................................................................................................................................2333.3310001000000000000000000000212100001001001000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTGAAGGATG.........................................................................................................2733.3310000000000000100000000000003000002002020000000000000000000000000
..........................................................................................................................................TTGAAGGATGCTTCCAAGGGACGCGT.........................................................................................2633.009000020000020010000000000000100000000102000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--C...................................................................................................................2143.0012003000100000100000000000121100000000100000000000000000000000001
.........................................................TAGCTCTTTGATGGTAACCAGG..............................................................................................................................................................................2232.678004000000000000000000000010200000000100000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--....................................................................................................................2041.506001000001000000000000000002000001000100000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACCAGGATC...........................................................................................................................................................................2531.334000000000000000000000000001000000000000000000000000000000000003
.....................................................................................................................CAATGGACTGCTGGAAGC--CTTGAAG.............................................................................................................2541.255002010000000000000000000100100000000000000000000000000000000000
......................................................................................................................................................TCCAAGGGACGCGTCTTGCTCC.................................................................................2221.002001000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................TTGAAGGATGCTTCCAAGGGACGC...........................................................................................2431.003000000100000000000000000000100000000001000000000000000000000000
..........................................................AGCTCTTTGATGGTAACCAGGATGGT-C.......................................................................................................................................................................2731.003000000000000000000000000000000000000000000000000000000000000003
..........................................................................................................................................TTGAAGGATGCTTCCAAGGGACG............................................................................................2331.003000000000001000000000000000000000000002000000000000000000000000
.........................................................................................................................................................................TCCTGAGG---------------------------------------------------------------TCCTTGCTGTGG.2040.753000000000000200000000000000000000000010000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTTGAAA.............................................................................................................2740.753001000000000000000000000010000000001000000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CG..................................................................................................................2240.753210000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTGAA..............................................................................................................2240.753000000000000100000000000200000000000000000000000000000000000000
........................................................................................................................TGGACTGCTGGAAGC--CTTGAAGGATGC........................................................................................................2730.672000000000000000000000000002000000000000000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACCAGGATGGA-........................................................................................................................................................................2730.672000000000000000000000000000100000001000000000000000000000000000
..........................................................AGCTCTTTGATGGTAACCAGGATG...........................................................................................................................................................................2430.672002000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GACTGCTGGAAGC--CTTGAAGGATGC........................................................................................................2530.672000000000000000000000000010000000000001000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTGAAGGATGC........................................................................................................2830.672000000000000000000000000002000000000000000000000000000000000000
..........................................................AGCTCTTTGATGGTAACCAGGA.............................................................................................................................................................................2230.672002000000000000000000000000000000000000000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACCAG...............................................................................................................................................................................2140.502000000000000000000000000010100000000000000000000000000000000000
...................................................................................................................................................GCTTCCAAGGGACGCGTCTTGCTCC.................................................................................2520.501001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GCAATGGACTGCTGGAAGC--CTTG................................................................................................................2340.502002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GCAATGGACTGCTGGAAGC--CTTGAA..............................................................................................................2540.502002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAG.......................................................................................................................1940.502101000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TTGAAGGATGCTTCCAAGGGACGCGTC........................................................................................2720.501000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTTT................................................................................................................2440.502000000000000000000000000100100000000000000000000000000000000000
.........................................................................................................................................................................TCCTGAGG---------------------------------------------------------------TCCTTGCTGTGGT2140.502000000101000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TTCCAAGGGACGCGTCTTGCTC..................................................................................2220.501000000000000000000000000000000000000001000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACC.................................................................................................................................................................................1940.502000000001000000000000000000100000000000000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CC..................................................................................................................2240.502200000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTGA...............................................................................................................2140.502000000000000000000000000100000000001000000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTTGAAGG............................................................................................................2840.502002000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TGAAGGATGCTTCCAAGGGACGCGT.........................................................................................2530.331000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................TGGACTGCTGGAAGC--CTTGAAGGATG.........................................................................................................2630.331000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................TTGAAGGATGCTTCCAAGGGAC.............................................................................................2230.331000000000000000000000000000000000000001000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACCAGGATGGT-A.......................................................................................................................................................................2830.331000000000000000000000000000100000000000000000000000000000000000
..........................................................AGCTCTTTGATGGTAACCAGGATC...........................................................................................................................................................................2430.331000000000000000000000000000000000000000000000000000000000000001
..............................................................CTTTGATGGTAACCAGGATGGT-........................................................................................................................................................................2230.331000000000000000000000000000000000000000000000000000000000000001
..............................................................CTTTGATGGTAACCAGGATGG..........................................................................................................................................................................2130.331000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................TTGAAGGATGCTTCCAAGGGACGCG..........................................................................................2530.331000010000000000000000000000000000000000000000000000000000000000
..........................................................AGCTCTTTGATGGTAACCAGGAT............................................................................................................................................................................2330.331001000000000000000000000000000000000000000000000000000000000000
..........................................................AGCTCTTTGATGGTAACCAGGATGG..........................................................................................................................................................................2530.331001000000000000000000000000000000000000000000000000000000000000
........................................................TTAGCTCTTTGATGGTAACCAGGATGGT-C.......................................................................................................................................................................2930.331000000000000000000000000000000010000000000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACCAGGATGGA-A.......................................................................................................................................................................2830.331000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTGAAGGAA..........................................................................................................2630.331000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................TTGAAGGATGCTTCCAAGGG...............................................................................................2030.331000000000000000000000000000100000000000000000000000000000000000
............................................................CTCTTTGATGGTAACCAGGAT............................................................................................................................................................................2130.331000000000000000000000000000000001000000000000000000000000000000
......................................................CTTTAGCTCTTTGATGGTAACCAGGAT............................................................................................................................................................................2730.331000000000000000000000000010000000000000000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACCAGGATGGC-........................................................................................................................................................................2730.331000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................GACTGCTGGAAGC--CTTGAAGGATGCT.......................................................................................................2630.331000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAATA--....................................................................................................................2040.251000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................GCAATGGACTGCTGGAAGC--....................................................................................................................1940.251001000000000000000000000000000000000000000000000000000000000000
.............................................TTGCGCATCCTTTAGCTCTTTGATGG......................................................................................................................................................................................2640.251000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................CTGCAATGGACTGCTGGAAGC--CT..................................................................................................................2340.251100000000000000000000000000000000000000000000000000000000000000
.....................................................................................TG---------CAATTGCGGCATTTAGTG...........................................................................................................................................2040.251000000000000000000000000100000000000000000000000000000000000000
........................................................TTAGCTCTTTGATGGTAACC.................................................................................................................................................................................2040.251000000001000000000000000000000000000000000000000000000000000000
............................................................................................................TTAGTGCTGCAATGGACTGCTGGAAG.......................................................................................................................2640.251000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTTGAAT.............................................................................................................2740.251000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTC.................................................................................................................2340.251001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTG................................................................................................................2040.251000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAA........................................................................................................................1840.251000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTGAAGAG...........................................................................................................2540.251000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................GCTGGAAGC--CTTGAAGGA...........................................................................................................1840.251000000000000000000000000001000000000000000000000000000000000000
.........................................................TAGCTCTTTGATGGTAACCA................................................................................................................................................................................2040.251000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................GCAATGGACTGCTGGAAGC--CTTGAAG.............................................................................................................2640.251001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GCAATGGACTGCTGGAAGC--CTT.................................................................................................................2240.251001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTTGG...............................................................................................................2540.251100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTTC................................................................................................................2440.251000000000000000000000000001000000000000000000000000000000000000
................................................CGCATCCTTTAGCTCTTTGATGGTAA...................................................................................................................................................................................2640.251000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................TTTAGTGCTGCAATGGACTGCTGGAAG.......................................................................................................................2740.251000000000000000000000000001000000000000000000000000000000000000
TTGGAAAAC-------CGAGCTG-----CGGAG--------AACC................................................................................................................................................................................................................2540.251000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGAAGC--CTTGAACC............................................................................................................2840.251010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATGGACTGCTGGAAGC--CTTGAAGGT...........................................................................................................2540.251000000000000000000000000100000000000000000000000000000000000000
...........................................................................CAGGATGGT-TG---------CAATTGCGGCATTT...............................................................................................................................................2540.251000000000000000000000000000100000000000000000000000000000000000
.....................TG-----CGGAG--------AACCTTGCGCATCCTTTAGC................................................................................................................................................................................................2750.201000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................TTTAGTGCTGCAATGGACTGCTG...........................................................................................................................2390.111001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGCAATGGACTGCTGGTC........................................................................................................................18200.051000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................AGTGCTGCAATGGACTGCTGT..........................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
droGri2
TCTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGGCTG---------------------------------------------------------------TTCTTGTTGCTGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AACT----------------------------------------------------------CGTTGAAGATGGCCTGTTCGGT-GA---------CAGTCATAGCACACAGTGGTGCAATGTGCTGTTTGCAACGGCTTGGACGA-----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................TGTTCGGT-GA---------CAGTCATAGCACACAG.............................................................................................................................................2611.00100010
droAna3
GAAAAC---CC-------ATCTG-----TAGAG--------AACCCTGCGCCTCCTATAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................TCTG-----TAGAG--------AACCCTGCGCCTCCTAT...................................................................................................................................................................................................26200.306600000
.....C---CC-------ATCTG-----TAGAG--------AACCCTGCGCCTC.......................................................................................................................................................................................................26200.102020000
....................CTG-----TAGAG--------AACCCTGCGCCTCCTATA..................................................................................................................................................................................................26200.051100000
..................ATCTG-----TAGAG--------AACCCTGCGCCTC.......................................................................................................................................................................................................23200.051010000
..................ATCTG-----TAGAG--------AACCCTGCGCCT........................................................................................................................................................................................................22200.051010000
..........C-------ATCTG-----TAGAG--------AACCCTGCGCCTC.......................................................................................................................................................................................................24200.051100000
droKik1
TGGGGCAGT-------TG---------------CAACCGAGTGTTTCGGTCTATTTGTAGATCTCTTACGACAAGTGAGATTGTGTGCAAGCTGGTCTACCGTGTTTTTGAGTTCC--AA-GAGCATTTTCGTT-------ATATTGGAAAGATCCCAAGGTA-----CCAAA-----------------------------------------TTTTGGCCTCTCTCTTTTTGTGCA--TTATTATTGTGACSizeHit CountTotal NormTotal
No Reads
droFic1
TTAAC----------------TG-----GGAAA--------GATCCAGGGAATGCTTGAGC----------------------------------------------------------------------------------------------------------------------------TGTT----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCAGAA---CCGTGACCAGTTCT-----CGAAA--------TGCTTTGTTTGCCTCCAAAGTTTCTTGAACCAGCTTAAATA--------ATTGGTCCATTCTTCCGTTGATCTCCCTTATGGAGTTCTCCAACG--CCCGGAATTTATTATCAGGCAGCACG-----TTTGG-------------------------------------------------------------------TTCTTGTTGGGTASizeHit CountTotal NormTotal
No Reads
droBia1
TTGAACGGC-------CGAGCTA-----CGGGG--------AACTTAATGCACCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTAGAA---GC----------TC-----CAGGA--------GATTTTGAGTGCGCACAAGC----------------------------------------------------------------------------------------------------------------------------TCCT----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droSim2
GTCAACGAC-------T-----------AAAAACATCCGAGTTCTGTGATCTCCT---------------------CAAGTA--------GCTCAGCGATGGTTTTTTGGAGACCAGCAATGGACAACTGCATT-------GAGATGATGATTTGTTAGAATG-----TTGAGGTTGGCTTGCGTTTGTTACAGGAAGATCAGTATCTGGAATAGTCTGGTATCTTGCATTTGAGACAGAACTTCACTGCTGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................TCCGAGTTCTGTGATCTCCT---------------------CAAGTA--------GC.................................................................................................................................................................2821.50300000010000020000
........................................................................................................................TGGACAACTGCATT-------GAGATGATGATT....................................................................................................2621.50300000010100010000
........................................................................................................................TGGACAACTGCATT-------GAGATGATGAT.....................................................................................................2521.00200000000200000000
....................................................................................................................................TT-------GAGATGATGATTTGTTAGAATG-----T....................................................................................2521.00200000001010000000
....................................................................................................................................................TGATTTGTTAGAATG-----TTGAGGTTGGC..........................................................................2621.00200000010000010000
.................................................................................................................................................................................................................................TGCATTTGAGACAGAACTTCACTGC...2521.00200000000200000000
....................................................................................................................................................................................TGCGTTTGTTACAGGAAGATCAGTATC..............................................2730.67200000000002000000
..........................................................................................................................................................................................TGTTACAGGAAGATCAGTATCTGGAA.........................................2630.67200000000200000000
............................................................................................................................................................................................................................TATCTTGCATTTGAGACAGAACTTCAC......2720.50100000000010000000
............................................TGTGATCTCCT---------------------CAAGTA--------GCTCAGCGAT.........................................................................................................................................................2720.50100000000000010000
..........................................TCTGTGATCTCCT---------------------CAAGTA--------GCTCAGCGA..........................................................................................................................................................2820.50100000000000010000
.................................................TCTCCT---------------------CAAGTA--------GCTCAGCGATGGT......................................................................................................................................................2520.50100000000100000000
.................................................................................................................................................TGATGATTTGTTAGAATG-----TTGAGGT..............................................................................2520.50100000010000000000
....................................................................................................................................TT-------GAGATGATGATTTGTTAGAATG-----TT...................................................................................2620.50100000000010000000
......................................................T---------------------CAAGTA--------GCTCAGCGATGGTT.....................................................................................................................................................2120.50100000000100000000
....................................................................................................................................................TGATTTGTTAGAATG-----TTGAGGTTG............................................................................2420.50100000010000000000
........................................................................................................................................................TTGTTAGAATG-----TTGAGGTTGGCTTG.......................................................................2520.50100000000000010000
............................................TGTGATCTCCT---------------------CAAGTA--------GCTCAGCGA..........................................................................................................................................................2620.50100000000000010000
.........................................................................................................................................................TGTTAGAATG-----TTGAGGTTGGCTTGCG.....................................................................2620.50100000000100000000
......................................................................................................................................................ATTTGTTAGAATG-----TTGAGGTT.............................................................................2120.50100000000100000000
........................................................................................................................TGGACAACTGCATT-------GAGATGATGATTT...................................................................................................2720.50100000000000010000
.........................................................................................................................................................................................................................TGGTATCTTGCATTTGAGACAGAACT..........2620.50100000001000000000
.................................................TCTCCT---------------------CAAGTA--------GCTCAGCGA..........................................................................................................................................................2120.50100000000000001000
.............................................................................................................................................................................................TACAGGAAGATCAGTATCTGGAA.........................................2330.33100000000001000000
.........................................................................................................................................................................................TTGTTACAGGAAGATCAGTATCTGGAA.........................................2730.33100000010000000000
...................................................................................................................................................................................TTGCGTTTGTTACAGGAAGATCAG..................................................2430.33100000000100000000
..................................................................................................................................................................................................GAAGATCAGTATCTGGAATAG......................................2130.33100000000001000000
....................................................................................................................................................................................................AGATCAGTATCTGGAATAGTCTGGT................................2530.33100000000001000000
....................................................................................................................................................................................TGCGTTTGTTACAGGAAGATCAGT.................................................2430.33100000000100000000
..................................................................................................................................................................................CTTGCGTTTGTTACT............................................................15200.05100000001000000000
droSec2
AATTGC---GCT----GCGTCAACGACTTAAAACATCTGAGTTCTTTGATCTCCT---------------------CAAGTA--------GCTGAGCGATGGTTTTTTGGAGACCAGCAATGGACAGCTGCATT-------GAGATGATGATTTGTTAGAATG-----TTGAGGTTGGCTTGCGTTTGT----------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads

Generated: 05/15/2015 at 03:34 PM