ID:

dvi_16718

 Coordinate:

scaffold_13047:12975125-12975189 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ22907-cds]; exon [dvir_GLEANR_8269:8]; CDS [Dvir\GJ22907-cds]; exon [dvir_GLEANR_8269:9]; intron [Dvir\GJ22907-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------##################################################
CGTGCCAAAAAATCGCTGGAATTCATCAGATCGGCCAAAAATAATGTTAAGTATGGAAACGCTTACCGAATTATGTTGCAATTCATTTTATAAATGCTTTACTGTTTTCTTTTAGATGTGCTACAACGAAAGGCTCAGTTATTAATGCTTCGTTATTTGCACTCG
**************************************************....(((((((.........(((((.............))))).........)))))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 M047
female body
 M027
male body		 SRR060676
9xArg_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 M028
head
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060677
Argx9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060688
160_ovaries_total
 SRR060689
160x9_testes_total
 V053
head
 SRR060668
160x9_males_carcasses_total
...............................................TAAGTATGGAAAGGATAACC.................................................................................................. 20 3 8 2.63 21 12 2 0 0 0 6 0 0 0 0 0 0 1 0
................TGGAATTCATCAGATCGGCCA................................................................................................................................ 21 0 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................ATTAATGCTTCGTTATTTGCA.... 21 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................AAGTATGGAAAGGATAACC.................................................................................................. 19 3 20 1.80 36 11 19 1 0 0 1 0 0 0 0 0 0 4 0
....................................................................................................................TGTGCTACAACGAAAGGCTCAGTTATT...................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGCTACAACGAAAGGCTCAG........................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................GTTATTAATGCTTCGTTATTT....... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................CAGATCGGCCAAAAATAAT........................................................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................GAATTCATCAGATCGGCC................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CTACAACGAAAGGCTCAGTTAT....................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................ATCAGATCGGCCAAAAAT........................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................TCAGATCGGCCAAAAATAATG....................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................TGGAATTCATCAGATCGGCCAAAA............................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......AAAAAGTCGCTGGAATTCATCAGAT...................................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................AAAGGCTCAGTTATTAATGCT................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GCTACAACGAAAGGCTCAGTTATT...................... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................TGTTTTCTTTTAGATGTGCTA.......................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CGAAAGGCTCAGTTATTAATG.................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................CATCAGATCGGCCAAAAATAATGTT..................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................GCTACAACGAAAGGCTCAGTT......................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........AATCGCTGGAATTCATCAGATCGGCC................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................TCATCAGATCGGCCAAAAATAAT........................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................AAGTATGGAAAGGATAACCG................................................................................................. 20 3 7 0.71 5 1 3 1 0 0 0 0 0 0 0 0 0 0 0
...............................................TAAGTATGGAAAGGATAACCG................................................................................................. 21 3 3 0.67 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................GTATGGGACTGCTTACCG................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................CTGCGAATGGCTCAGTTAT....................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCACGGTTTTTTAGCGACCTTAAGTAGTCTAGCCGGTTTTTATTACAATTCATACCTTTGCGAATGGCTTAATACAACGTTAAGTAAAATATTTACGAAATGACAAAAGAAAATCTACACGATGTTGCTTTCCGAGTCAATAATTACGAAGCAATAAACGTGAGC
**************************************************....(((((((.........(((((.............))))).........)))))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060663
160_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060660
Argentina_ovaries_total
 SRR060687
9_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060669
160x9_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060657
140_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060679
140x9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 M047
female body
 SRR060667
160_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 M027
male body		 V047
embryo
 M028
head
 SRR060685
9xArg_0-2h_embryos_total
 V053
head
 SRR060655
9x160_testes_total
 SRR060675
140x9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060683
160_testes_total
 M061
embryo
 SRR060689
160x9_testes_total
 SRR060677
Argx9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060674
9x140_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060673
9_ovaries_total
 SRR1106730
embryo_16-30h
 SRR1106727
larvae
.........................................................TTGCGAATGGCTTAAGACGA........................................................................................ 20 2 2 3044.50 6089 2671 912 507 402 118 232 191 133 153 75 94 173 67 38 38 24 37 35 31 32 29 17 13 25 2 11 8 6 3 4 4 0 2 1 1 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACGAAG...................................................................................... 22 3 2 2774.50 5549 2326 751 617 222 224 214 270 104 166 81 34 111 78 55 37 47 30 28 25 35 24 25 4 5 0 6 10 4 5 6 1 3 0 0 0 1 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACGA........................................................................................ 19 2 2 1294.00 2588 1450 183 174 127 72 66 23 87 31 41 64 23 30 18 16 15 11 12 21 13 24 16 19 9 19 9 4 2 2 2 2 0 1 0 0 1 0 1 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACG......................................................................................... 19 2 3 1223.33 3670 1524 453 356 193 119 128 158 61 110 59 68 65 48 35 36 25 33 22 22 29 21 11 30 15 17 6 4 7 2 1 3 3 2 2 1 0 1 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAGACGA........................................................................................ 21 3 3 1044.33 3133 1769 229 136 65 136 57 13 157 15 73 57 8 97 32 38 25 23 43 32 33 38 17 0 9 0 9 2 2 3 3 1 4 1 4 0 1 1 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACGAAG...................................................................................... 21 3 2 968.00 1936 1029 159 127 48 122 54 17 61 11 52 27 7 33 19 20 28 20 19 13 9 8 22 6 2 10 6 4 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACGAA....................................................................................... 21 3 5 333.20 1666 873 166 115 40 70 47 59 19 56 26 13 51 43 9 15 9 8 9 8 12 5 4 0 3 1 1 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGAC.......................................................................................... 18 1 1 252.00 252 6 45 15 72 8 8 4 12 5 5 19 9 5 6 7 3 5 5 2 1 1 2 1 0 0 1 2 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAGACG......................................................................................... 20 3 6 242.83 1457 654 66 62 19 123 12 13 102 7 56 40 3 73 41 29 16 19 24 19 25 15 15 1 5 0 5 3 1 4 2 0 0 0 0 0 1 0 1 1 0 0 0
..........................................................TGCGAATGGCTTAAGACG......................................................................................... 18 2 3 170.00 510 21 39 59 27 45 13 13 46 10 29 31 6 19 18 21 6 6 5 8 10 13 8 18 0 19 8 6 0 2 3 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACGAA....................................................................................... 20 3 7 76.14 533 296 23 28 12 38 10 3 16 8 18 4 3 28 3 7 8 2 6 1 1 5 3 2 2 2 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAGA........................................................................................... 18 2 4 56.25 225 6 8 5 4 40 1 2 20 0 20 27 1 14 5 8 7 6 7 18 5 9 3 0 0 0 4 0 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAGAC.......................................................................................... 19 2 2 39.50 79 22 2 3 1 7 1 0 5 0 3 9 2 4 2 3 1 2 0 3 1 3 3 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GCGAATGGCTTAAGACGA........................................................................................ 18 2 4 34.75 139 8 8 7 9 13 5 2 12 1 7 14 2 9 1 4 2 4 0 8 4 2 3 6 0 4 0 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................GCGAATGGCTTAAGACGAAG...................................................................................... 20 3 9 19.44 175 110 9 4 2 6 6 1 4 1 2 0 0 5 6 2 3 2 0 4 0 1 0 1 0 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GGTTGCGAATGGCTTAAGAC.......................................................................................... 20 3 5 18.60 93 38 7 8 10 3 0 2 4 4 1 0 2 1 0 0 0 1 0 1 0 0 0 3 1 0 1 2 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0
.........................................................TTGCGAATGGCTTAAGACTA........................................................................................ 20 2 1 14.00 14 13 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GGTTGCGAATGGCTTAAGA........................................................................................... 19 3 20 13.15 263 100 15 29 13 6 8 5 12 4 4 11 3 2 4 5 3 0 0 23 3 4 2 0 1 0 0 2 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACTA........................................................................................ 19 2 1 8.00 8 4 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACCAAG...................................................................................... 22 3 1 7.00 7 4 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAACACGAAG...................................................................................... 22 3 1 6.00 6 1 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TTTGCGAATGGCTTAAGACGAAG...................................................................................... 23 3 1 5.00 5 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAACACGA........................................................................................ 20 2 1 5.00 5 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACGAAGT..................................................................................... 23 3 1 5.00 5 1 0 1 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACTAAG...................................................................................... 22 3 1 4.00 4 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACC......................................................................................... 19 2 1 3.00 3 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAGACCA........................................................................................ 21 3 1 3.00 3 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACT......................................................................................... 19 2 2 3.00 6 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACCA........................................................................................ 20 2 1 3.00 3 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAACACGA........................................................................................ 21 3 1 3.00 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGCATGGCTTAAGACGA........................................................................................ 20 3 5 2.80 14 5 1 0 3 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACTAAG...................................................................................... 21 3 2 2.50 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACGAC....................................................................................... 21 2 2 2.50 5 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAAGGGCTTAAGACGA........................................................................................ 20 3 3 2.33 7 1 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACAAA....................................................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACAA........................................................................................ 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACGAG....................................................................................... 21 3 2 2.00 4 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACAA........................................................................................ 20 1 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GGTTGCGAATGGCTTAAGACAA........................................................................................ 22 3 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAATACGAAGC..................................................................................... 23 3 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAATACG......................................................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAATACGAAG...................................................................................... 23 3 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACC......................................................................................... 18 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CGTTGCGAATGGCTTAAGACGA........................................................................................ 22 3 2 2.00 4 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACAAAG...................................................................................... 22 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACGAGG...................................................................................... 22 3 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACGACG...................................................................................... 22 2 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GTTTGCGAATGGCTTAAGACGA........................................................................................ 22 3 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TCGCGAATGGCTTAAGACGA........................................................................................ 20 3 5 1.80 9 2 2 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GCGAATGGCTTAAGACGAA....................................................................................... 19 3 20 1.65 33 24 1 0 0 2 1 0 1 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CTGCGAATGGCTTAAGACGA........................................................................................ 20 3 8 1.63 13 2 1 2 1 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAAACGA........................................................................................ 20 2 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACGACGC..................................................................................... 23 3 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTCAAGACGA........................................................................................ 20 3 6 1.33 8 3 1 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CTTGCGAATGGCTTAAGACGA........................................................................................ 21 3 4 1.25 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAACGGCTTAAGACGA........................................................................................ 20 3 15 1.07 16 5 6 1 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGTTGCTTTCCGAGTCAATAA...................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAGACAAAG...................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACGATG...................................................................................... 21 3 2 1.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATGCGAATGGCTTAAGACGA........................................................................................ 20 3 4 1.00 4 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAATACGAAG...................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TTTGCGAATGGCTTAAGACGAA....................................................................................... 22 3 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACTAG....................................................................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACAAG....................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CACGATGTTGCTTTCCGAGTC........................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAATACGA........................................................................................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAGACAAG....................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACGC........................................................................................ 20 3 6 1.00 6 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACA......................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAGACTA........................................................................................ 21 3 2 1.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACA......................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACGAAGT..................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGA........................................................................................... 16 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAGACA......................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGATGA........................................................................................ 20 3 6 1.00 6 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GTGCGAATGGCTTAAGACGA........................................................................................ 20 3 4 0.75 3 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TGGCGAATGGCTTAAGACGA........................................................................................ 20 3 7 0.71 5 0 2 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAAAGGCTTAAGACGA........................................................................................ 20 3 10 0.70 7 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAGTGGCTTAAGACGA........................................................................................ 20 3 10 0.70 7 2 2 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAAACGA........................................................................................ 19 2 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACTAA....................................................................................... 21 3 3 0.67 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TGGCGAATGGCTTAAGAC.......................................................................................... 18 2 3 0.67 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CGTTGCGAATGGCTTAAGACG......................................................................................... 21 3 3 0.67 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGATTAAGACGA........................................................................................ 20 3 9 0.56 5 0 3 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CGGTTGCGAATGGCTTAAGAC.......................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACGAC....................................................................................... 20 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACGATG...................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGGATGGCTTAAGACGA........................................................................................ 20 3 4 0.50 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAACACG......................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GTTTGCGAATGGCTTAAGACG......................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACCAA....................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CGACGCAATGATTACGAAGC............. 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................ACGGTTGCGAATGGCTTAAGAC.......................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAGACC......................................................................................... 20 3 6 0.50 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCAAATGGCTTAAGACGA........................................................................................ 20 3 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGACTGGCTTAAGACGA........................................................................................ 20 3 10 0.40 4 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCCAATGGCTTAAGACGA........................................................................................ 20 3 13 0.38 5 2 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGAAGA........................................................................................ 20 3 8 0.38 3 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TCGCGAATGGCTTAAGACG......................................................................................... 19 3 19 0.37 7 1 2 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTGAGACGAC....................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TGGCGAATGGCTTAAGACG......................................................................................... 19 3 12 0.33 4 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAAACGAAG...................................................................................... 22 3 6 0.33 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACTAA....................................................................................... 20 3 6 0.33 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTCAGACGA........................................................................................ 20 3 6 0.33 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGACGG........................................................................................ 20 3 6 0.33 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGATTGGCTTAAGACGA........................................................................................ 20 3 6 0.33 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGGGTGGATTAATACAAC....................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CGAATGGCTTAAGACGACG...................................................................................... 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAACACGAA....................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAAGGGCTTAAGACGA........................................................................................ 19 3 16 0.25 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCAAATGGCTTAAGACGA........................................................................................ 19 3 20 0.25 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GCGAATGGCTTAAGACTAAG...................................................................................... 20 3 8 0.25 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCCTAAGACGA........................................................................................ 20 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTGAGACGA........................................................................................ 20 3 12 0.25 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGCCTTAAGACGA........................................................................................ 20 3 12 0.25 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CGAATGGCTTAAGAC.......................................................................................... 15 1 13 0.23 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1
.........................................................TTGCGAAGGGCTTAAGACG......................................................................................... 19 3 14 0.21 3 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTTAAGATG......................................................................................... 19 3 19 0.21 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGACTGGCTTAAGACG......................................................................................... 19 3 20 0.20 4 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTCAAGACG......................................................................................... 19 3 15 0.20 3 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACCAA....................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CGAATGGCTTAAGACGAGG...................................................................................... 19 3 20 0.20 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CTGCGAATGGCTTAAGACG......................................................................................... 19 3 20 0.20 4 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAAAGGCTTAAGACG......................................................................................... 19 3 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATCGCTTAAGACGA........................................................................................ 20 3 11 0.18 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCCTAAGACGA........................................................................................ 19 3 11 0.18 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTCAAGACGA........................................................................................ 19 3 17 0.18 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GGTTGCGAATGGCTTAAT............................................................................................ 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGTATGGCTTAAGACGA........................................................................................ 20 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCCAATGGCTTAAGACGA........................................................................................ 19 3 20 0.15 3 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TGACAAAAGAAAAGCGAC............................................... 18 2 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGGATGGCTTAAGACGA........................................................................................ 19 3 15 0.13 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCCTAAGACG......................................................................................... 19 3 15 0.13 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGGATGGCTTAAGACG......................................................................................... 19 3 15 0.13 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAAACGA........................................................................................ 21 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATTGCTTAAGACGA........................................................................................ 20 3 16 0.13 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CGAATGGCTTAATACGAA....................................................................................... 18 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAAACGAAG...................................................................................... 21 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTGAAGACGA........................................................................................ 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCGTAAGACGA........................................................................................ 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGTATGGCTTAAGACG......................................................................................... 19 3 20 0.10 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGATTAAGACG......................................................................................... 19 3 20 0.10 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCAAATGGCTTAAGACG......................................................................................... 19 3 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACGTC....................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAGTGGCTTAAGACGA........................................................................................ 19 3 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGCTCAAGACT......................................................................................... 19 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTACGAATGGCTTAAGAC.......................................................................................... 18 2 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGCGAATGGCTTAAAACG......................................................................................... 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATGGGTTAAGACGA........................................................................................ 20 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTCAGACGA........................................................................................ 19 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGACGC........................................................................................ 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGCATGGCTTAAGACG......................................................................................... 19 3 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCGAATCGCTTAAGACG......................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................AGCGAATGGCTTAAGACGA........................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTAAGAAGA........................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGCCAATGGCTTAAGACG......................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TCGGAGTCAATAATTATCAA............... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GATGCGAATGGCTTAAGA........................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGCGAATGGCTTGAGACGA........................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:12975075-12975239 - dvi_16718 CGTGCCAAAAAATCGCTGGAATTCATCAGATCGGCCAAAAATAATGTTAAGTATGGAAACGCTTACCGAAT--------------------------------------------------------------------------------------TATGTTGCAATT-------------CATTTTATAA---------A------TGCTTTA-----------CT----------------------------------------------------------------------------------------------------------------------------------------------------G---------TTTTCTTTTAGATGTGCTACAACGAAAGGCTCAGTTATTAATGCTTCGTTATTTGCACTCG
droMoj3 scaffold_6540:28878944-28879103 + CGCGCCAAAAAGTCACTGGAGTTTATAAGATCAGCCAAACATAACGTTAAGTAAGACAATCAG-----------------------------------------------CTT--------------------------------------------TAAATTA---------TCATAAGTTC-G------------------------CCTCTA-----------AT----------------------------------------------------------------------------------------------------------------------------------------------------GCTTTTCA---TTCTTTATAGATGTGCTACAACAAAAGGATCTGTTATAAATGCTTCGTTGTTTGCACTCG
droGri2 scaffold_14949:726-890 + CGTGCCAAAAAGTCACTTGAGTTCATTAGATCGGCTAAAAATAATGTGAAGTGAGTAAATC--------GCTAT----------------------------------------GCG-------------------------------------AGTTAACAAA-------------------------------------CTGTAAA-TCTGTA-----------AT----------------------------------------------------------------------------------------------------------------------------------------------------TCGTCCCTTTTTTTATTTCAGATGTGTGACCACAAAGGGCTCTGTAATTAGTGCTTCACTATTTGCCCTGG
droWil2 scf2_1100000004902:8223409-8223562 - CGTGCCAAAAAGTCCATGGAGTTCATCAAGTCCGCTAAGAATAATGTGAAGTAAGTATTAAAT--------CCC--------------------------------------------------------------------------------T--------------CTTAGCTACAGTT--------------------------------------TTAGTAA---------------------------------------------------------------------------------------------------------------------------------------------T-------G-CAT----TTTCCATTTTAGATGTGCTACCACCAAGGGATCTTTTGTAAATGCTTCCGTTTTTGCTTTGG
dp5 2:14978824-14978988 + CGCGCCAAAAAGTCCCTGGAGTTCATCAAGTCGGCCAAGAGCAACTTGAAGTAAGACATCCAT--------------------------------------------TTGATT--------------------------------------------TAT------ATTCTTTTCAAGAGTT---------------------------TCTCTA-----------CC----------------------------------------------------------------------------------------------------------------------------------------------------GTGATTGA--CTCCATTTCAGGTGTGCAACTACAAAGGGATCTTTTGTAAATGCCTCGGTGTTCGGATTGG
droPer2 scaffold_0:5429689-5429853 - dpe_397 CGCGCCAAAAAGTCCCTGGAGTTCATCAAGTCGGCCAAGAGCAACTTGAAGTAAGACATACAT--------------------------------------------TTGATT--------------------------------------------TAT------ATTCTTTTCAAGAGTT---------------------------TCTCTA-----------CC----------------------------------------------------------------------------------------------------------------------------------------------------GTGATTGA--CTCCATTTCAGGTGTGCAACTACAAAGGGATCTTTTGTAAATGCCTCGGTGTTCGGATTGG
droAna3 scaffold_13340:18793250-18793408 + CGAGCCAAGAAATCTCTGGAGTTTATTAAGTCAGCCAAGAGCAATGTGAAGTAAGTGGGCTTT----------------------------------------------------------------------------------------------------------CTTTGTAGGAATT---------------------------TCGATATGTCCTTATCAA---------------------------------------------------------------------------------------------------------------------------------------------C-------G-AAT------TGACTTTTAGGTGTGCCACCACAAAGGGTTCGTTTGTTAACGCCTCGGTATTTGCCCTGG
droBip1 scf7180000395652:379788-379946 - CGGGCCCAGAAATCCCTTGAGTTTATTAAGTCAGCCAAGAGCAATGTGAAGTGAGTGGACTTTCT------TTT----------------------------------------TGG-------------------------------------GA-----------------------TTT---------------------------ACTTTATGTCCTTATCAA---------------------------------------------------------------------------------------------------------------------------------------------C-------G-AAT------TGACTTTCAGGTGTGCCACCACAAAGGGATCTTTTGTTAACGCCTCGGTATTTGCTCTGG
droKik1 scf7180000302388:1067686-1067933 + CGGGCCAAGAAATCCCTGGAGTTTATCAAGTCTGCTAAGAGTAATGTGAAGTAAGTAATCGATAATCTCTGGCC--------------------------------------------------------------------------------GGCTGATTAG-------------------------------------T--------------------------------------GGTTGCGATTAGAGAATGCAGTAATCTGGATTAGGCAAC----------------AATGT-TTTTGCCTTGTAATACTGTGTTTATTGAGTAAGAGATAATA--------------------ATATATGAAACTCTG---T----TTCCCTTTTCAGATGTGCCACCACCAAGGGCTCGTTTGTCAATGCCTCAGTGTTCGCCTTGG
droFic1 scf7180000454055:756555-756846 - CGAGCCAAAAAGTCGTTGGAGTTTATTAAGTCAGCCAAGAGCAATGTTAAGTAAGTAATTGTTATTTTTATGTCATGACTAGGGATTTCTGATTACGTGCTTTGAGGCG-ATTACCTCATTTAATTGTTTGTTTCCCATGTGATATAATTTGCTGATAATGTAACATTT-------------CAGCGTATAAACTCAAAAGTCATAAT----------------------------------------------------------------------------------TTTATAATGTATTATTCCTTGCTGATCG------------------------CTCTTTT----------------------A--------C-----TTTTATTTAAGGTGTGCTACCACAAAGGGTTCATTTGTTAATTCATCGGTGTTTGCCTTAG
droEle1 scf7180000491212:165318-165593 - CGGGCCAAAAAGTCACTTGAATTCATCAAGTCGGCTAAGAGTAATGTGAAGTAAGCAATTGTTGATTTCGTTTT----------------------------------------GCC-------------------------------------AATT----CC-------------------------------------T--------------------------GATTACAGCTTTAATGGCGATTAGTTAATTTTGTAATCTAGTCTGGGGTATACTCTGGCAGTTCTATAATTTTTTTTTCATTGTTGTTCTG--------------GAAATATTACCCATCCATTTTTATGTCATGCTTATCAAA--------C-----TCTTTTTTTAGGTGTGCTACCACAAAGGGCTCGTTTGTCAATGCTTCGGTATTTGCCTTGG
droRho1 scf7180000778266:28750-28907 + CGGGCCAAAAAGTCGCTTGAGTTCATTAAGTCGGCCAAGAGTAATGTGAAGTAAGCTATTGTTGATTTC------------------------------------------------------------------------------------------T---------------AGCCATTC-----------------------------GTATGCCATGCTTAA---------------------------------------------------------------------------------------------------------------------------------------------C-------A-AAC------TTCTTTTCAGGTGTGCTACCACAAAGGGCTCATTTGTTAACGCTTCGGTATTTGCCTTAG
droBia1 scf7180000302136:1651414-1651523 - CGCGCCAAAAAGTCTTTGGAGTTCATCAAGTCGGCCAAAAGCAATGTGAAGTAAGCTTTCGTTGGTTTATTTTT----------------------------------------CCG-------------------------------------AGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGATAATTTATAGGTTACT------------GATTTC-
droTak1 scf7180000415242:68473-68572 + CGGGCCAAAAAGTCTCTGGAGTTTATCAAGTCGGCCAAGAGCAATGTGAAGTAAGCTATTGTTTT------TTT----------------------------------------CCG-------------------------------------GGTTGAATTG-------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAGATTACTGATTTCT-------------------
droEug1 scf7180000409692:545699-545772 + AT-----------------------------------------------------TCATTATTAATTTCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAGATGTGCTACCACAAAAGGCTCATTTGTCAATGCTTCGGTGTTTGCCTTAG
dm3 chr3R:20855981-20856127 - CGGGCCAAAAAGTCGTTAGAGTTCATCAAGTCGGCCAAAGGCAATGTGAAGTAAGCTATTGTTAATTATATTCC----------------------------------------GCG-------------------------------------CG------------T-------------CAGCTCATAG---------T------TCCTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGATATCT---GATAAAGGGTT----TACTAGCGATTAGCTATTTATAATTC
droSim2 3r:20366865-20366967 - CGGGCCAAAAAGTCGCTAGAGTTCATCAAGTCGGCCAAAGGCAATGTGAAGTAAGCTATTGTTAATTATATTTC----------------------------------------GCG-------------------------------------CG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCTAATAGTTCCTTTATTACT-------------------
droSec2 scaffold_33:117801-117903 - CGGGCCAAAAAGTCGCTAGAGTTCATCAAGTCGGCCAAAGGCAATGTGAAGTAAGCTATTGTTAATTATATTTC----------------------------------------GCG-------------------------------------CG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCTAATAGTTCCTTTATTATT-------------------
droYak3 3R:25641603-25641705 + CGGGCCAAAAAGTCGTTAGAGTTTATCAAGTCGGCCAAAAGCAATGTGAAGTAAGCTATTGTTGATTTAGTTTC----------------------------------------GCG-------------------------------------CG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCTAATAGTTCCTTTATTACT-------------------
droEre2 scaffold_4820:7196789-7196896 + CGGGCCAAAAAGTCGTTAGAGTTTATCAAGTCGGCCAAAAGCAATGTGAAGTAAGTTATTGTTGATTGAATTTC----------------------------------------GCG-------------------------------------CG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTAATTGTTTCGTTATTACT------------GATTTCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CGTGCCAAAAAATCGCTGGAATTCATCAGATCGGCCAAAAATAATGTTAAGTATGGAAACGCTTACCGAAT--------------------------------------------------------------------------------------TATGTTGCAATT-------------CATTTTATAA---------A------TGCTTTA-----------CT----------------------------------------------------------------------------------------------------------------------------------------------------G---------TTTTCTTTTAGATGTGCTACAACGAAAGGCTCAGTTATTAATGCTTCGTTATTTGCACTCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................TGGAATTCATCAGATCGGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000010000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAATGCTTCGTTATTTGCA....2112.002000000000000000000000000000000000000001000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTACAACGAAAGGCTCAGTTATT......................2711.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGCTACAACGAAAGGCTCAG...........................2011.001000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATTAATGCTTCGTTATTT.......2111.001000000000000000100000000000000000000000000000000000000000000000
..........................CAGATCGGCCAAAAATAAT..................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
..................GAATTCATCAGATCGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTACAACGAAAGGCTCAGTTAT.......................2211.001000000000000000000000000000000000000000000000000000000000000010
........................ATCAGATCGGCCAAAAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.........................TCAGATCGGCCAAAAATAATG.................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
................TGGAATTCATCAGATCGGCCAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGCTCAGTTATTAATGCT................2111.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................GCTACAACGAAAGGCTCAGTTATT......................2411.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------G---------TTTTCTTTTAGATGTGCTA..........................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGGCTCAGTTATTAATG..................2111.001000000000000000000000000000100000000000000000000000000000000000
.......................CATCAGATCGGCCAAAAATAATGTT...............................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GCTACAACGAAAGGCTCAGTT.........................2111.001001000000000000000000000000000000000000000000000000000000000000
..........AATCGCTGGAATTCATCAGATCGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................TCATCAGATCGGCCAAAAATAAT..................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
CGCGCCAAAAAGTCACTGGAGTTTATAAGATCAGCCAAACATAACGTTAAGTAAGACAATCAG-----------------------------------------------CTT--------------------------------------------TAAATTA---------TCATAAGTTC-G------------------------CCTCTA-----------AT----------------------------------------------------------------------------------------------------------------------------------------------------GCTTTTCA---TTCTTTATAGATGTGCTACAACAAAAGGATCTGTTATAAATGCTTCGTTGTTTGCACTCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........AAAGTCACTGGAGTTTATAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTATAAATGCTTCGTTG..........2111.001000001
droGri2
CGTGCCAAAAAGTCACTTGAGTTCATTAGATCGGCTAAAAATAATGTGAAGTGAGTAAATC--------GCTAT----------------------------------------GCG-------------------------------------AGTTAACAAA-------------------------------------CTGTAAA-TCTGTA-----------AT----------------------------------------------------------------------------------------------------------------------------------------------------TCGTCCCTTTTTTTATTTCAGATGTGTGACCACAAAGGGCTCTGTAATTAGTGCTTCACTATTTGCCCTGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGACCACAAAGGGCTC.............................2120.50101
droWil2
CGTGCCAAAAAGTCCATGGAGTTCATCAAGTCCGCTAAGAATAATGTGAAGTAAGTATTAAAT--------CCC--------------------------------------------------------------------------------T--------------CTTAGCTACAGTT--------------------------------------TTAGTAA---------------------------------------------------------------------------------------------------------------------------------------------T-------G-CAT----TTTCCATTTTAGATGTGCTACCACCAAGGGATCTTTTGTAAATGCTTCCGTTTTTGCTTTGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................AGTCCGCTAAGAATAATGTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAGGGATCTTTTGTAAATGCT................2411.00100001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTTCCGTTTTTGCTTT..2011.00101000
dp5
CGCGCCAAAAAGTCCCTGGAGTTCATCAAGTCGGCCAAGAGCAACTTGAAGTAAGACATCCAT--------------------------------------------TTGATT--------------------------------------------TAT------ATTCTTTTCAAGAGTT---------------------------TCTCTA-----------CC----------------------------------------------------------------------------------------------------------------------------------------------------GTGATTGA--CTCCATTTCAGGTGTGCAACTACAAAGGGATCTTTTGTAAATGCCTCGGTGTTCGGATTGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................TCTCTA-----------CC----------------------------------------------------------------------------------------------------------------------------------------------------GTGATTGA--CTCCATTT.....................................................2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GATCTTTTGTAAATGCCTCGGC...........2211.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCGGTGTTCGGATTG.1811.0010100000000
..............CCTGGAGTTCATCAAGTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
............TCCCTGGAGTTCATCAAGTCGGCCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
......................................................................................................................................................................ATTCTTTTCAAGAGTT---------------------------TCTCTA-----------CC----------------------------------------------------------------------------------------------------------------------------------------------------.......................................................................2411.0010100000000
droPer2
CGCGCCAAAAAGTCCCTGGAGTTCATCAAGTCGGCCAAGAGCAACTTGAAGTAAGACATACAT--------------------------------------------TTGATT--------------------------------------------TAT------ATTCTTTTCAAGAGTT---------------------------TCTCTA-----------CC----------------------------------------------------------------------------------------------------------------------------------------------------GTGATTGA--CTCCATTTCAGGTGTGCAACTACAAAGGGATCTTTTGTAAATGCCTCGGTGTTCGGATTGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................GTCGGCCAAGAGCAACTTGAAGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGATCTTTTGTAAATGCCTCGGTG..........2711.001010000
.GCGCCAAAAAGTCCCTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.............................GTCGGCCAAGAGCAACTTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droAna3
CGAGCCAAGAAATCTCTGGAGTTTATTAAGTCAGCCAAGAGCAATGTGAAGTAAGTGGGCTTT----------------------------------------------------------------------------------------------------------CTTTGTAGGAATT---------------------------TCGATATGTCCTTATCAA---------------------------------------------------------------------------------------------------------------------------------------------C-------G-AAT------TGACTTTTAGGTGTGCCACCACAAAGGGTTCGTTTGTTAACGCCTCGGTATTTGCCCTGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................AAGTGGGCTTT----------------------------------------------------------------------------------------------------------CTTTGTAGG.............................................................................................................................................................................................................................................................................2011.001000010
...............................CAGCCAAGAGCAATGTGAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.GAGCCAAGAAATCTCTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCACCACAAAGGGTTCG............................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................GTGCCACCACAAAGGGTTCGT...........................2111.001100000
droBip1
CGGGCCCAGAAATCCCTTGAGTTTATTAAGTCAGCCAAGAGCAATGTGAAGTGAGTGGACTTTCT------TTT----------------------------------------TGG-------------------------------------GA-----------------------TTT---------------------------ACTTTATGTCCTTATCAA---------------------------------------------------------------------------------------------------------------------------------------------C-------G-AAT------TGACTTTCAGGTGTGCCACCACAAAGGGATCTTTTGTTAACGCCTCGGTATTTGCTCTGGSizeHit CountTotal NormTotal
No Reads
droKik1
CGGGCCAAGAAATCCCTGGAGTTTATCAAGTCTGCTAAGAGTAATGTGAAGTAAGTAATCGATAATCTCTGGCC--------------------------------------------------------------------------------GGCTGATTAG-------------------------------------T--------------------------------------GGTTGCGATTAGAGAATGCAGTAATCTGGATTAGGCAAC----------------AATGT-TTTTGCCTTGTAATACTGTGTTTATTGAGTAAGAGATAATA--------------------ATATATGAAACTCTG---T----TTCCCTTTTCAGATGTGCCACCACCAAGGGCTCGTTTGTCAATGCCTCAGTGTTCGCCTTGGSizeHit CountTotal NormTotal
No Reads
droFic1
CGAGCCAAAAAGTCGTTGGAGTTTATTAAGTCAGCCAAGAGCAATGTTAAGTAAGTAATTGTTATTTTTATGTCATGACTAGGGATTTCTGATTACGTGCTTTGAGGCG-ATTACCTCATTTAATTGTTTGTTTCCCATGTGATATAATTTGCTGATAATGTAACATTT-------------CAGCGTATAAACTCAAAAGTCATAAT----------------------------------------------------------------------------------TTTATAATGTATTATTCCTTGCTGATCG------------------------CTCTTTT----------------------A--------C-----TTTTATTTAAGGTGTGCTACCACAAAGGGTTCATTTGTTAATTCATCGGTGTTTGCCTTAGSizeHit CountTotal NormTotal
No Reads
droEle1
CGGGCCAAAAAGTCACTTGAATTCATCAAGTCGGCTAAGAGTAATGTGAAGTAAGCAATTGTTGATTTCGTTTT----------------------------------------GCC-------------------------------------AATT----CC-------------------------------------T--------------------------GATTACAGCTTTAATGGCGATTAGTTAATTTTGTAATCTAGTCTGGGGTATACTCTGGCAGTTCTATAATTTTTTTTTCATTGTTGTTCTG--------------GAAATATTACCCATCCATTTTTATGTCATGCTTATCAAA--------C-----TCTTTTTTTAGGTGTGCTACCACAAAGGGCTCGTTTGTCAATGCTTCGGTATTTGCCTTGGSizeHit CountTotal NormTotal
No Reads
droRho1
CGGGCCAAAAAGTCGCTTGAGTTCATTAAGTCGGCCAAGAGTAATGTGAAGTAAGCTATTGTTGATTTC------------------------------------------------------------------------------------------T---------------AGCCATTC-----------------------------GTATGCCATGCTTAA---------------------------------------------------------------------------------------------------------------------------------------------C-------A-AAC------TTCTTTTCAGGTGTGCTACCACAAAGGGCTCATTTGTTAACGCTTCGGTATTTGCCTTAGSizeHit CountTotal NormTotal
No Reads
droBia1
CGCGCCAAAAAGTCTTTGGAGTTCATCAAGTCGGCCAAAAGCAATGTGAAGTAAGCTTTCGTTGGTTTATTTTT----------------------------------------CCG-------------------------------------AGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGATAATTTATAGGTTACT------------GATTTC-SizeHit CountTotal NormTotal
No Reads
droTak1
CGGGCCAAAAAGTCTCTGGAGTTTATCAAGTCGGCCAAGAGCAATGTGAAGTAAGCTATTGTTTT------TTT----------------------------------------CCG-------------------------------------GGTTGAATTG-------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAGATTACTGATTTCT-------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AT-----------------------------------------------------TCATTATTAATTTCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAGATGTGCTACCACAAAAGGCTCATTTGTCAATGCTTCGGTGTTTGCCTTAGSizeHit CountTotal NormTotal
No Reads
dm3
CGGGCCAAAAAGTCGTTAGAGTTCATCAAGTCGGCCAAAGGCAATGTGAAGTAAGCTATTGTTAATTATATTCC----------------------------------------GCG-------------------------------------CG------------T-------------CAGCTCATAG---------T------TCCTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGATATCT---GATAAAGGGTT----TACTAGCGATTAGCTATTTATAATTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................TCATCAAGTCGGCCAAAGGCAATGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................27110.00100000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000003000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000
........................ATCAAGTCGGCCAAAGGCAATGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................CG-------------------------------------CG------------T-------------CAGCTCATAG---------T------TCCT...........................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTCATCAAGTCGGCCAAAGGCAATGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000
....................GTTCATCAAGTCGGCCAAAGGCAATG.................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
....................GTTCATCAAGTCGGCCAAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
......AAAAAGTCGTTAGAGTTCATCAAGTCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
............TCGTTAGAGTTCATCAAGTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000
...........................................ATGTGAAGTAAGCTATTGTTA...............................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
CGGGCCAAAAAGTCGTTAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.....................TTCATCAAGTCGGCCAAAGGCAATG.................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TACTGATATCT---GATAAAGGGT...............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000
................................................................ATTATATTCC----------------------------------------GCG-------------------------------------CG------------T-------------CAGCT....................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTCATCAAGTCGGCCAAAGGCAATGTG...............................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................CAAGTCGGCCAAAGGCAATGT................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GTTAGAGTTCATCAAGTCGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............CGTTAGAGTTCATCAAGTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.GGGCCAAAAAGTCGTTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....CAAAAAGTCGTTAGAGTTCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ACTGATATCT---GATAAAGGGTT----..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......................CATCAAGTCGGCCAAAGGCAATGT................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AGGCAATGTGAAGTAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.............CGTTAGAGTTCATCAAGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................AGTTCATCAAGTCGGCCAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTAGAGTTCATCAAGTCGGCCAAAGGCA....................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTT----TACTAGCGATTAG.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...GCCAAAAAGTCGTTAGAGTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................AGTCGGCCAAAGGCAATGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................TTCATCAAGTCGGCCAAAGGCAATGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGATATCT---GATAAAGGGTT----T.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............TTAGAGTTCATCAAGTCGGCCAAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGGCCAAAGGCAATGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TAGAGTTCATCAAGTCGGCCAAAGGCAA...................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................AGTTCATCAAGTCGGCCAAAGGCAATG.................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCAAGTCGGCCAAAGGCAATGTGAAA............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTGATATCT---GATA.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....CAAAAAGTCGTTAGAGTTCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................CATCAAGTCGGCCAAAGGCAA...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...............................CGGCCAAAGGCAATGTGAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....CCAAAAAGTCGTTAGAGTTCATCAAGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CGTTAGAGTTCATCAAGTCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................T---GATAAAGGGTT----TACTAG....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.......AAAAGTCGTTAGAGTTCATCAAGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................ATGTGAAGTAAGCTATTGTT................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGTTCATCAAGTCGGCCAAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTCATCAAGTCGGCCAAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTTCATCAAGTCGGCCAAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCCAAAAAGTCGTTAGAGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................CATCAAGTCGGCCAAAGGCAATGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............TCGTTAGAGTTCATCAAGTCGGCCAAA........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGTTCATCAAGTCGGCCAAAGGCAATGT................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAAGTCGTTAGAGTTCATCAAGTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATCAAGTCGGCCAAAGGCAATGTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..................GAGTTCATCAAGTCGGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTACTGATATCT---GATAAAGGGT...............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGGGCCAAAAAGTCGCTAGAGTTCATCAAGTCGGCCAAAGGCAATGTGAAGTAAGCTATTGTTAATTATATTTC----------------------------------------GCG-------------------------------------CG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCTAATAGTTCCTTTATTACT-------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................TCATCAAGTCGGCCAAAGGCAATGTG...............................................................................................................................................................................................................................................................................................................................................................................................................2616.00600000000000006000
.............CGCTAGAGTTCATCAAGTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300300000000000000
....................GTTCATCAAGTCGGCCAAAGGCAATGTGG..............................................................................................................................................................................................................................................................................................................................................................................................................2912.00200200000000000000
......................TCATCAAGTCGGCCAAAGGCA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
......................TCATCAAGTCGGCCAAAGGCAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
......................TCATCAAGTCGGCCAAAGGCAATG.................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
....................GTTCATCAAGTCGGCCAAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.....CAAAAAGTCGCTAGAGTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.....................TTCATCAAGTCGGCCAAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.................AGAGTTCATCAAGTCGGCCAAAGGCAA...................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
CGGGCCAAAAAGTCGCTAGAGTTCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
droSec2
CGGGCCAAAAAGTCGCTAGAGTTCATCAAGTCGGCCAAAGGCAATGTGAAGTAAGCTATTGTTAATTATATTTC----------------------------------------GCG-------------------------------------CG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCTAATAGTTCCTTTATTATT-------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................GTTCATCAAGTCGGCCAAAGGCAATGT................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
....................GTTCATCAAGTCGGCCAAAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
droYak3
CGGGCCAAAAAGTCGTTAGAGTTTATCAAGTCGGCCAAAAGCAATGTGAAGTAAGCTATTGTTGATTTAGTTTC----------------------------------------GCG-------------------------------------CG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCTAATAGTTCCTTTATTACT-------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................GTTTATCAAGTCGGCCAAAAGCAATGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
................................GGCCAAAAGCAATGTGAAGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...............................................................GATTTAGTTTC----------------------------------------GCG-------------------------------------CG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGC......................................2111.00100100000000
..............GTTAGAGTTTATCAAGTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
CGGGCCAAAAAGTCGTTAGAGTTTATCAAGTCGGCCAAAAGCAATGTGAAGTAAGTTATTGTTGATTGAATTTC----------------------------------------GCG-------------------------------------CG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTAATTGTTTCGTTATTACT------------GATTTCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................GTTTATCAAGTCGGCCAAAAGCAATGT................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
....................GTTTATCAAGTCGGCCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010100000

Generated: 05/16/2015 at 09:24 PM