ID:

dvi_16712

 Coordinate:

scaffold_13047:12977946-12978082 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.4 -31.2 -31.1 -30.8

Flybase annnotation

CDS [Dvir\GJ22907-cds]; CDS [Dvir\GJ22907-cds]; exon [dvir_GLEANR_8269:2]; exon [dvir_GLEANR_8269:1]; intron [Dvir\GJ22907-in]

Repeatable elements

NameClassFamilyStrand
(TA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------##################################################
AGAGGATGCTGAAAATACGGAACCTACGCCACCAGCCAGTACAAGGCCAGGTAATATAGATACATGAGTCACACTTAAGCGCGCAACAATTAACAGTGGTTTCTCTCTCTATATAAATATATATATATATATGTATATTGTGTGTGTATAACTGTGTGTTTTTGCGCGCGCGTGAATATCTTTTCAGTCAAAATTCTGAGCAAGCCGAAGGAAAATGCTGGAAATACGACAGGAATA
**************************************************.......................((...((((((((.(((..(((((......................((((((((((((.......)))))))))))))))))..))).))))))))................))************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 SRR060665
9_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060683
160_testes_total
 SRR1106730
embryo_16-30h
 M027
male body		 SRR060666
160_males_carcasses_total
 V047
embryo
......................................................................................................................................................................................................................ATGCTGGAAATACGACAGGA... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
..............ATACGGAACCTACGCCACCAGC......................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................AAGCCGAAGGAAAATGCT.................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................................AGTGGTTTCTCTCTCTAT............................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GCAAGCCGAAGGAAAATG.................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0
.......GCTGAAGTTACGGAACCT.................................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 0 0 0 1 0 0
..............................................................................................AGTGGTTTCTCTCTCTCT............................................................................................................................. 18 1 4 0.25 1 1 0 0 0 0 0 0 0
............................................................................................................................................TGTGCGTGTAACTGTGTGTTTTT.......................................................................... 23 2 5 0.20 1 0 0 0 0 0 0 1 0
...........................................AGGCCAGGTCGTATTGATA............................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCTCCTACGACTTTTATGCCTTGGATGCGGTGGTCGGTCATGTTCCGGTCCATTATATCTATGTACTCAGTGTGAATTCGCGCGTTGTTAATTGTCACCAAAGAGAGAGATATATTTATATATATATATATACATATAACACACACATATTGACACACAAAAACGCGCGCGCACTTATAGAAAAGTCAGTTTTAAGACTCGTTCGGCTTCCTTTTACGACCTTTATGCTGTCCTTAT
**************************************************.......................((...((((((((.(((..(((((......................((((((((((((.......)))))))))))))))))..))).))))))))................))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060672
9x160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060668
160x9_males_carcasses_total
 V047
embryo
 M047
female body
 SRR060682
9x140_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR060664
9_males_carcasses_total
 SRR060676
9xArg_ovaries_total
 V053
head
 GSM1528803
follicle cells
..................................CGGTCGTGTTCCGGTACACTA...................................................................................................................................................................................... 21 3 2 2.50 5 3 0 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................ATAGAAAAGGCAGTTTTAA.......................................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................CGGTCATGTTCCGGTACGCTA...................................................................................................................................................................................... 21 3 3 0.67 2 0 0 0 0 1 0 1 0 0 0 0 0
..................................CGGTCGTGTTCCGGTACGTTA...................................................................................................................................................................................... 21 3 11 0.27 3 2 1 0 0 0 0 0 0 0 0 0 0
............................................................ATGTACTCAGGGGGAATCC.............................................................................................................................................................. 19 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................GCGGTCATGTTCCGGTAC.......................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
.............TTATGGCTTGGGTGCGGTGA............................................................................................................................................................................................................ 20 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................CGGTCATGTTCCGGTACGCT....................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0
..................................CGGTCGTGTTCCGGTACA......................................................................................................................................................................................... 18 2 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AGAGAGAGATATATTAAGATATC................................................................................................................. 23 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0
..............TATGGCTTGGATGAGGGGG............................................................................................................................................................................................................ 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................TATTTATATATATATATATACATAT.................................................................................................... 25 0 19 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
..................................CGGTCGTGTTCCGGT............................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................ATACGTATATACATATAACACA.............................................................................................. 22 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:12977896-12978132 - dvi_16712 AG---------------------------------------------------AGGATGCTGAAAATACGGAACCTACGCCAC---CAGC------------------CAGTACAAGGCCAGGTAATATAG-A-TACAT-------------------------GA-----------------------GTCACA---CTTAAGCGCGCAACAATTAACAGTGGTTTCTCTCTCTATATAAATATATATATATATATGTATATT---GTGTGTGTATA-ACTGTGTGTTTTTGCGCGCGCGT---GAATATCTTT---------TCAGTCAA--AATTCTGAGCAAG---CCGA----------AGG---AAAATGC-------------------------------------------------------------------TGG-AAATA----------C--GA----CAGGAA-TA
droMoj3 scaffold_6540:28876068-28876276 + AG---------------------------------------------------AGGATGCTGAAAATGCGGAACCAAC---TCCACCAGC------------------CATTACAAGGCCAGGTATATTTG---AG--AC----------------------ATGA-----------------------CTCACT---CTTAAGCGCGCAATAATTCTCTGAC---------------------------AATTTTTGTTCATT---GTGTGTTTGTA-TCTGTG----TTTGCGCGCGC---AATCTTTTATAT---------ACAGTCCA--AATATTGTGCAAG---CCAA----------AGA---AAAATGC-------------------------------------------------------------------TGG-AAATACGTC------T-------AGAGAGG-TA
droGri2 scaffold_15074:3997008-3997189 - CG---------------------------------------------------AGGATGCTGAAAATGCGGAACCCAAGCCAGCCGCAAAAGT---------------CACTTCAAGGCCAGGCATGTAT--T-AT-AC-----------------------A-----------TACACACACACATGAGTCACA---GCA-A---------------------------------------------TTA----------ACA---G---------C----------G----------TT-TATTTCCTTATCT---------TTAGTTAC--AGTTTTGAGCAGG---CCAA----------AGGAGAATAATGT-------------------------------------------------------------------TGG-CATTG----CTCC--TATGA----TGAGAG-CA
droWil2 scf2_1100000004902:8226208-8226418 - CA---------------------------------------------------TC-----------------------------GATGACGAC---------------GACTTCAAGGCCAAGTAAGTTGT---GGGAA-------C--TACAAATTTA---ATGC-----------------------G------------AATGCGTAA--------------------------------------TA----------ATA---A---------C----------A----------AT-TTCCTATTTC--C---------GCAGTAAC--CATATTGACTAAG---TCATC---GTT---ATT---AA--CATCGACATCATCTGTTGGTGATCAGGCAAAACCTTTGGTCAAAGTACCCATCCTACAGGTGAGCGAGCAAGG-AAATAA---GCC---T---------AGGGA-CA
dp5 2:14975947-14976131 + AG---------------------------------------------------AAGATGCTGAAAATTCGGAGCCCCCGATGGCGATGACAAAAACAACAAA---GAGTTGCCCAAGGCCAAGTAAGTTTA---AAT---------------------------AC-----------------------GTCACG---GTT-GTTTT---------------------TT-------------------------------AC-CAT-----------CACATCATGTTTTTTCA----CTT---TGACATATTC---------ACAGTCAA--GATTTTGAGCAAT---TCATC---AGCAAAGGA---AA-----------------------------------------------------------------------------A-ATG---------C--AA----TGAAAA-AA
droPer2 scaffold_0:5432546-5432733 - AG---------------------------------------------------AAGATGCTGAAAATTCGGAGCCCCCGATGGCGATGACAAAAACAACAAAGAAGAGTTGCCCAAGGCCAAGTAAGTTTA---AAT---------------------------AC-----------------------GTCACG---GTT-GTTTT---------------------TT-------------------------------AC-CAT-----------CACATCATGTTTTTTCA----CTT---TGACATATTC---------ACAGTCAC--GATTTTGAACAAT---TCATC---AGCAAAGGA---AA-----------------------------------------------------------------------------A-ATG---------T--AA----TGAAAA-AA
droAna3 scaffold_13340:18790412-18790568 + AGT------------------------------------------------GGAAAACGCTGAGAATGCGGAGCCC------------------------------------CCAAGGCCAGGTGAGTGTGTT-TGTGT---------GTG-----TTA---ATGC-----------------------GTCATTGCGTTG-GCTGC----------------------------------------ATCT----------ATA---T---------C----------T----------TC-T-CCAATTTCACCATCC-----GCAGTCAC--GATCCTGAGCAATAATGCAAC---GGC---GG-------T-----------------------------------------------------------------------GATTAAGCC---------C-------------A-AG
droBip1 scf7180000395652:382619-382773 - AGT------------------------------------------------GGAAAACGCTGAGAATGCTGAGCCC------------------------------------CCAAGGCCAGGTGAGTGTGTT-TGTGT---------GTG-----TTA---ATGC-----------------------GTCATTGCGTTG-AGTGC----------------------------------------ATC-----------------C---------T--------ATA----------TC-T-CGGATTTCACCATCC-----GTAGTCAC--GATCTTGAGCAATCATGCAAC---GGT---GG-------C-----------------------------------------------------------------------GATTAAGCC---------C-------------A-AG
droKik1 scf7180000302388:1064741-1064893 + GG---------------------------------------------------AGAACGTTGAGAATGCGGAGCCAGCGTCGT---------------------------CGCCAAGGCCAGGTGAGTGTGCTCTGCGT-CTCTGTGTGAG-----CAA---GTGC-----------------------GTCACA-----------------------------------------------------TC------------TA---G---------T----------A----------TC-TTCTGATTTCACCACTT-----GCAGTCAC--CGTCCTGAGCAGT---GCAAC---TAC---TGC---GA------------------------------------------------------------------------------AGCC---------C-------------A-AG
droFic1 scf7180000454055:759475-759642 - GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCAGTTTCAACGACTACGAA---------------TGCGTCAAGGCCAGGTAATCGA-----GTATG----------------------ACGCATCAAATATGCAAACA----------------------AAC----------------------------------------GTCT----------AT-------------------------A----------TC-TTTCGATTTCACAAATCA-T-AGCAGTCAC--CATCCTGAGCAAT---TCAGC---TGC---AGG---GA------------------------------------------------------------------------------AACCGATTC----C-------------G-GA
droEle1 scf7180000491212:168275-168442 - GGA------------------------------------------GGAGACAGAGAACGCTGAAAATGCGGAGCCAGT------------------------------TGCTCCAAGGCCAGGTGAGTCTGCCATACAT-AT----A--TACAAAGTTA---ATGC-----------------------GTCACA-----------------------------------------------------TCT----------GCA---T---------C----------A----------TT-ATACGATTTCACCACTCG-C-TGTAGTTAC--TATACTGAGCAAT---GCAGC---TGC---AGG---TGCA-----------------------------------------------------------------------GGAAGAGCC---------C----------------A
droRho1 scf7180000778266:25884-26049 + AG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCAGTTGCTGCGACTACGAA------------------CCCAAGGCCAGGTGAGTCTA---CATAT-------A--TACAAACTTA---ATGC-----------------------GTCACA-----------------------------------------------------TCT----------GTA---G---------T----------A----------TT-CCCCGATTTCACCACTCA-T-TGCAGTCAC--CATCCTGAGCAAT---GCAGC---TGC---AGG---AA------------------------------------------------------------------------------AACCGAATC----A-------------G-AA
droBia1 scf7180000302136:1654187-1654371 - GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCAGTTGCTCCGACGGCGAT---------------CGCCTCAAGGCCAGGTGAGTGTG---TGTGCG--------GTG-----T-------GA-----------------------GTCACG---ATC-GGG-------------------------------------------TCT----------ATA---G---------CCAC-------A----------TC-TCCCGATTTCACCATCCAGCCACCAGTCGCCACATCCTGAGCAAT---GCAGC---CAC---TGG---GAA------------------------------------------------------------------------------ACCCAGTCC---C--CAGGCCCAGGC--GG
droTak1 scf7180000415242:65697-65862 + GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCAGT------------------------------TGCTCCAAGGCCAGGTGAGTGTG---TGCGT---------GTG-----TGAATGACGCA-----------------------T--------------TC----------------------------------------ATC-----------ACA---A---------C----------A----------TC-TTCCGATTTCACCACCAG-CCACCAGTCGCCACATCCTGAGCAAT---GCAGCGGCTGC---AGG---GA------------------------------------------------------------------------------AGCCCAATCC---C--CA---CCAGGCGGTG
droEug1 scf7180000409692:542211-542393 + AACAACAACAG------------------------------CGTTGGAGACGGAAAACGCTGAAAATGCGGAGCCAGTTGCTACGACTGCGAA---------------TGCTTCAAGGCCAGGTAAACGTA---TGCATG----------------------ACGCA-----------------------TT------ATA-TATAC----------------------------------------GTAT----------ATA---G---------C----------A----------TC-TTTCGATTTCACCA---------CAGTCGC--AATCCTCAGCAAG---GCGGC---TCC---TGG---GA------------------------------------------------------------------------------AACCTAATCC---C--GACG---------CG
dm3 chr3R:20858765-20858937 - GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCCGTGGCTACGACAGCAAA---------------TGCTTCAAGGCCAGGTGAGTGT--T-TGCATG----------------------ACGCA-----------------------TCACA---ATA-GGTTC----------------------------------------GTCA----------ATA---A---------C----------A----------TC-TCTTAATTTCGCCA---------CAGTCGA--AATCCTGAGCAAT---GCTAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------ACC---C--GATGCCCAGTCA-AA
droSim2 3r:20369592-20369764 - dsi_16169 GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCCGTGGCTACGACAGCGAA---------------TGCTTCAAGGCCAGGTGAGTGT--T-TGCATG----------------------ACGCA-----------------------TCACA---ATA-GGTTC----------------------------------------GTCA----------ATA---A---------C----------A----------TC-TCTCGATTTCGCCA---------CAGTCGA--AATCCTGAGCAAT---GCGAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------ACC---C--GATGTCCAGGCA-AA
droSec2 scaffold_33:120521-120693 - GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCCGTGGCTACGACAGCGAA---------------TGCTTCAAGGCCAGGTGAGTGT--T-TGCATG----------------------ACGCA-----------------------TCACA---ATA-GGTTC----------------------------------------GTCA----------ATA---A---------C----------A----------TC-TCTCGATTTCGCAA---------CAGGCGA--AATCCTGAGCAAT---GCGAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------ACC---C--GATGTCCAGGCA-AA
droYak3 3R:25638739-25638961 + AGCAGCAGCAGCAACAACAGCACCAACAACAAAAGCGTTTGCGACGGAGACGGAAAACGCAGAGAATGCGGAGCCAGTGGCAACGATAGCGAA---------------TGCTTCAAGGCCAGGTGAGTGT--T-TGCATG----------------------ACGCA-----------------------TCACT---GTA-GACAC----------------------------------------GTCC----------ATG---T---------C----------A----------TC-TCCCGATTTCGCCA---------CAGTCGC--CATCCTGAGCAAT---GCGGC---CGC---AGG---AAAG-----------------------------------------------------------------------GGTAA-------AAC---C--GATGCCCAGGT--CA
droEre2 scaffold_4820:7193961-7194133 + GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCCGTGGCTA---CAGCGAA---------------TGCTTCAAGGCCAGGTGAGTGT--T-TGCATG----------------------ACGCA-----------------------TCACT---ATA-GATAC----------------------------------------GTCC----------ATG---A---------C----------A----------TC-TCTCGATTTCACCA---------CAGTCGC--CATCCTGAGCAAT---GCGAC---CGT---GGG---AAAG-----------------------------------------------------------------------GGTAA-------ACCCCCC--GATGCCCAGGTG-AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AG---------------------------------------------------AGGATGCTGAAAATACGGAACCTACGCCAC---CAGC------------------CAGTACAAGGCCAGGTAATATAG-A-TACAT-------------------------GA-----------------------GTCACA---CTTAAGCGCGCAACAATTAACAGTGGTTTCTCTCTCTATATAAATATATATATATATATGTATATT---GTGTGTGTATA-ACTGTGTGTTTTTGCGCGCGCGT---GAATATCTTT---------TCAGTCAA--AATTCTGAGCAAG---CCGA----------AGG---AAAATGC-------------------------------------------------------------------TGG-AAATA----------C--GA----CAGGAA-TASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................ATGC-------------------------------------------------------------------TGG-AAATA----------C--GA----CAGGA....2011.001000000000000000100000000000000000000000000000000000000000000000
.................................................................ATACGGAACCTACGCCAC---CAGC------------------.....................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................................................AAG---CCGA----------AGG---AAAATGC-------------------------------------------------------------------T....................................1811.001000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................AGTGGTTTCTCTCTCTAT....................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000001
......................................................................................................................................................................................................................................................................................................................................................GCAAG---CCGA----------AGG---AAAATG.........................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
AG---------------------------------------------------AGGATGCTGAAAATGCGGAACCAAC---TCCACCAGC------------------CATTACAAGGCCAGGTATATTTG---AG--AC----------------------ATGA-----------------------CTCACT---CTTAAGCGCGCAATAATTCTCTGAC---------------------------AATTTTTGTTCATT---GTGTGTTTGTA-TCTGTG----TTTGCGCGCGC---AATCTTTTATAT---------ACAGTCCA--AATATTGTGCAAG---CCAA----------AGA---AAAATGC-------------------------------------------------------------------TGG-AAATACGTC------T-------AGAGAGG-TASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................GTATATTTG---AG--AC----------------------ATGA-----------------------CTCACT---CT.........................................................................................................................................................................................................................................................................................2512.002000020
.......................................................................................................................................................................................................................................................................................................CGCGC---AATCTTTTATAT---------ACAG.........................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................G----TTTGCGCGCGC---AATCTTTTAT........................................................................................................................................................................2211.001100000
droGri2
CG---------------------------------------------------AGGATGCTGAAAATGCGGAACCCAAGCCAGCCGCAAAAGT---------------CACTTCAAGGCCAGGCATGTAT--T-AT-AC-----------------------A-----------TACACACACACATGAGTCACA---GCA-A---------------------------------------------TTA----------ACA---G---------C----------G----------TT-TATTTCCTTATCT---------TTAGTTAC--AGTTTTGAGCAGG---CCAA----------AGGAGAATAATGT-------------------------------------------------------------------TGG-CATTG----CTCC--TATGA----TGAGAG-CASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CA---------------------------------------------------TC-----------------------------GATGACGAC---------------GACTTCAAGGCCAAGTAAGTTGT---GGGAA-------C--TACAAATTTA---ATGC-----------------------G------------AATGCGTAA--------------------------------------TA----------ATA---A---------C----------A----------AT-TTCCTATTTC--C---------GCAGTAAC--CATATTGACTAAG---TCATC---GTT---ATT---AA--CATCGACATCATCTGTTGGTGATCAGGCAAAACCTTTGGTCAAAGTACCCATCCTACAGGTGAGCGAGCAAGG-AAATAA---GCC---T---------AGGGA-CASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCATCCTACAGGTGAGCGAGCAAG...................................2611.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCAAAACCTTTGGT...................................................................2011.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTACAGGTGAGCGAGCAAGG-AAA..............................2511.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTACCCATCCTACAGGG..............................................2111.00100010
.......................................................................................GACGAC---------------GACTTCAAGGCC.........................................................................................................................................................................................................................................................................................................................................................................1811.00100010
dp5
AG---------------------------------------------------AAGATGCTGAAAATTCGGAGCCCCCGATGGCGATGACAAAAACAACAAA---GAGTTGCCCAAGGCCAAGTAAGTTTA---AAT---------------------------AC-----------------------GTCACG---GTT-GTTTT---------------------TT-------------------------------AC-CAT-----------CACATCATGTTTTTTCA----CTT---TGACATATTC---------ACAGTCAA--GATTTTGAGCAAT---TCATC---AGCAAAGGA---AA-----------------------------------------------------------------------------A-ATG---------C--AA----TGAAAA-AASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................ATGCTGAAAATTCGGAGCCCC....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................TCGGAGCCCCCGATGGCGATG.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................GATGGCGATGACAAAAACAAC..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
AG---------------------------------------------------AAGATGCTGAAAATTCGGAGCCCCCGATGGCGATGACAAAAACAACAAAGAAGAGTTGCCCAAGGCCAAGTAAGTTTA---AAT---------------------------AC-----------------------GTCACG---GTT-GTTTT---------------------TT-------------------------------AC-CAT-----------CACATCATGTTTTTTCA----CTT---TGACATATTC---------ACAGTCAC--GATTTTGAACAAT---TCATC---AGCAAAGGA---AA-----------------------------------------------------------------------------A-ATG---------T--AA----TGAAAA-AASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AGT------------------------------------------------GGAAAACGCTGAGAATGCGGAGCCC------------------------------------CCAAGGCCAGGTGAGTGTGTT-TGTGT---------GTG-----TTA---ATGC-----------------------GTCATTGCGTTG-GCTGC----------------------------------------ATCT----------ATA---T---------C----------T----------TC-T-CCAATTTCACCATCC-----GCAGTCAC--GATCCTGAGCAATAATGCAAC---GGC---GG-------T-----------------------------------------------------------------------GATTAAGCC---------C-------------A-AGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................AATAATGCAAC---GGC---GG-------T-----------------------------------------------------------------------G...................................1812.002200000
........................................................................................................................................................................................................................................................................................................................................................AATAATGCAAC---GGC---GG-------T-----------------------------------------------------------------------GATTAAGC............................2511.001010000
................................................................................................................CCAAGGCCAGGTGAGTGT...............................................................................................................................................................................................................................................................................................................................................................1811.001000100
........................................................................................................................................................................................................................................................................................................................................................AATAATGCAAC---GGC---GG-------T-----------------------------------------------------------------------GA..................................1911.001100000
.GT------------------------------------------------GGAAAACGCTGAGAATGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..................................................................................................................................................................ATGC-----------------------GTCATTGCGTTG-GCTGC----------------------------------------..........................................................................................................................................................................................................................................2111.001001000
.............................................................................................................................AGTGTGTT-TGTGT---------GTG-----TT...................................................................................................................................................................................................................................................................................................................................1840.251000100
..........................................................................................................................GTGAGTGTGTT-TGTGT---------GTG-----T....................................................................................................................................................................................................................................................................................................................................20100.101100000
droBip1
AGT------------------------------------------------GGAAAACGCTGAGAATGCTGAGCCC------------------------------------CCAAGGCCAGGTGAGTGTGTT-TGTGT---------GTG-----TTA---ATGC-----------------------GTCATTGCGTTG-AGTGC----------------------------------------ATC-----------------C---------T--------ATA----------TC-T-CGGATTTCACCATCC-----GTAGTCAC--GATCTTGAGCAATCATGCAAC---GGT---GG-------C-----------------------------------------------------------------------GATTAAGCC---------C-------------A-AGSizeHit CountTotal NormTotal
No Reads
droKik1
GG---------------------------------------------------AGAACGTTGAGAATGCGGAGCCAGCGTCGT---------------------------CGCCAAGGCCAGGTGAGTGTGCTCTGCGT-CTCTGTGTGAG-----CAA---GTGC-----------------------GTCACA-----------------------------------------------------TC------------TA---G---------T----------A----------TC-TTCTGATTTCACCACTT-----GCAGTCAC--CGTCCTGAGCAGT---GCAAC---TAC---TGC---GA------------------------------------------------------------------------------AGCC---------C-------------A-AGSizeHit CountTotal NormTotal
No Reads
droFic1
GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCAGTTTCAACGACTACGAA---------------TGCGTCAAGGCCAGGTAATCGA-----GTATG----------------------ACGCATCAAATATGCAAACA----------------------AAC----------------------------------------GTCT----------AT-------------------------A----------TC-TTTCGATTTCACAAATCA-T-AGCAGTCAC--CATCCTGAGCAAT---TCAGC---TGC---AGG---GA------------------------------------------------------------------------------AACCGATTC----C-------------G-GASizeHit CountTotal NormTotal
No Reads
droEle1
GGA------------------------------------------GGAGACAGAGAACGCTGAAAATGCGGAGCCAGT------------------------------TGCTCCAAGGCCAGGTGAGTCTGCCATACAT-AT----A--TACAAAGTTA---ATGC-----------------------GTCACA-----------------------------------------------------TCT----------GCA---T---------C----------A----------TT-ATACGATTTCACCACTCG-C-TGTAGTTAC--TATACTGAGCAAT---GCAGC---TGC---AGG---TGCA-----------------------------------------------------------------------GGAAGAGCC---------C----------------ASizeHit CountTotal NormTotal
No Reads
droRho1
AG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCAGTTGCTGCGACTACGAA------------------CCCAAGGCCAGGTGAGTCTA---CATAT-------A--TACAAACTTA---ATGC-----------------------GTCACA-----------------------------------------------------TCT----------GTA---G---------T----------A----------TT-CCCCGATTTCACCACTCA-T-TGCAGTCAC--CATCCTGAGCAAT---GCAGC---TGC---AGG---AA------------------------------------------------------------------------------AACCGAATC----A-------------G-AASizeHit CountTotal NormTotal
No Reads
droBia1
GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCAGTTGCTCCGACGGCGAT---------------CGCCTCAAGGCCAGGTGAGTGTG---TGTGCG--------GTG-----T-------GA-----------------------GTCACG---ATC-GGG-------------------------------------------TCT----------ATA---G---------CCAC-------A----------TC-TCCCGATTTCACCATCCAGCCACCAGTCGCCACATCCTGAGCAAT---GCAGC---CAC---TGG---GAA------------------------------------------------------------------------------ACCCAGTCC---C--CAGGCCCAGGC--GGSizeHit CountTotal NormTotal
No Reads
droTak1
GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCAGT------------------------------TGCTCCAAGGCCAGGTGAGTGTG---TGCGT---------GTG-----TGAATGACGCA-----------------------T--------------TC----------------------------------------ATC-----------ACA---A---------C----------A----------TC-TTCCGATTTCACCACCAG-CCACCAGTCGCCACATCCTGAGCAAT---GCAGCGGCTGC---AGG---GA------------------------------------------------------------------------------AGCCCAATCC---C--CA---CCAGGCGGTGSizeHit CountTotal NormTotal
No Reads
droEug1
AACAACAACAG------------------------------CGTTGGAGACGGAAAACGCTGAAAATGCGGAGCCAGTTGCTACGACTGCGAA---------------TGCTTCAAGGCCAGGTAAACGTA---TGCATG----------------------ACGCA-----------------------TT------ATA-TATAC----------------------------------------GTAT----------ATA---G---------C----------A----------TC-TTTCGATTTCACCA---------CAGTCGC--AATCCTCAGCAAG---GCGGC---TCC---TGG---GA------------------------------------------------------------------------------AACCTAATCC---C--GACG---------CGSizeHit CountTotal NormTotal
No Reads
dm3
GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCCGTGGCTACGACAGCAAA---------------TGCTTCAAGGCCAGGTGAGTGT--T-TGCATG----------------------ACGCA-----------------------TCACA---ATA-GGTTC----------------------------------------GTCA----------ATA---A---------C----------A----------TC-TCTTAATTTCGCCA---------CAGTCGA--AATCCTGAGCAAT---GCTAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------ACC---C--GATGCCCAGTCA-AASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................TGCGGAGCCCGTGGCTACGACAGCAAT---------------.....................................................................................................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................GCTTCAAGGCCAGGTGAG..................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................GAGAATGCGGAGCCCGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000100000001000
..................................................................................................................................................................................................................................................................................................................................................................G---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------AC......................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................T---GCTAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------ACC---C--GA.............2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GTGAGTGT--T-TGCATG----------------------ACG............................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000
........................................................................................................................AGGTGAGTGT--T-TGCATG----------------------A..............................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000100000000000000000000
..............................................................AGAATGCGGAGCCCGTGGCTAC.............................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
..................................................................TGCGGAGCCCGTGGCTACGACAGCAAA---------------.....................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------A.......................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000
.......................................................AACGCTGAGAATGCGGAGCCCGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
GG---------------------------------------------------AAAACGCTGAGAATGCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CGCTGAGAATGCGGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CTAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------A.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AATGCGGAGCCCGTGGCTACG............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................CCTGAGCAAT---GCTAG---CAC---A....................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................................GCCAGGTGAGTGT--T-TGCAT......................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
............................................................TGAGAATGCGGAGCCCGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................CGTGGCTACGACAGCAAA---------------TGCTTC...............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................ATGCGGAGCCCGTGGCTACG............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................AAACGCTGAGAATGCGGAGCCCGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AACGCTGAGAATGCGGAGCCCGTGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...................................................................GCGGAGCCCGTGGCTACGAC..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GA--AATCCTGAGCAAT---GCT................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....................................................................CGGAGCCCGTGGCTACGTG..........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AT---GCTAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------ACC---C--...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................CAAT---GCTAG---CAC---AGG---AGGA-----------------------------------------------------------------------GG..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GCTGAGAATGCGGAGCCCG....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CCTGAGCAAT---GCTAG---CAC---AGG---AGGA-----------------------------------------------------------------------....................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------ACC---C--GATGCCC........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AGG---AGGA-----------------------------------------------------------------------GGCAA-------ACC---C--GA.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AGTCGA--AATCCTGAGCAAT---GCTAG---...........................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................GAATGCGGAGCCCGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CCTGAGCAAT---GCTAG---CAC---.....................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CAAT---GCTAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGC.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................AAGGCCAGGTGAGTGT--T-TGCA.......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTCAAGGCCAGGTGAGTG................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCTAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGC.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TG----------------------ACGCA-----------------------TCACA---ATA-GGT....................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................AGCAAA---------------TGCTTCAAGGCCAG.......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................GCTTCAAGGCCAGGTGAGTGT--T-TGCAT......................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................GTGAGTGT--T-TGCATG----------------------ACGC...........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AT---GCTAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCA................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................ACGCTGAGAATGCGGAGCCCGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AGTCGA--AATCCTGAGCAA.......................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AGAATGCGGAGCCCGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AGGTGAGTGT--T-TGCATG----------------------ACG............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................................................GAGAATGCGGAGCCCGTGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................AAACGCTGAGAATGCGGAGCCCGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GAGAATGCGGAGCCCGTGGCTAC.............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................................................................................................................................................................................................................................................................................AATCCTGAGCAAT---GCTAG---...........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................GACAGCAAA---------------TGCTTCAAGGCCA........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................GCGGAGCCCGTGGCTACGACA.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................AGGCCAGGTGAGTGT--T-TGC........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................G---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------AT......................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GGCCAGGTGAGTGT--T-TGG........................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
droSim2
GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCCGTGGCTACGACAGCGAA---------------TGCTTCAAGGCCAGGTGAGTGT--T-TGCATG----------------------ACGCA-----------------------TCACA---ATA-GGTTC----------------------------------------GTCA----------ATA---A---------C----------A----------TC-TCTCGATTTCGCCA---------CAGTCGA--AATCCTGAGCAAT---GCGAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------ACC---C--GATGTCCAGGCA-AASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................AAACGCTGAGAATGCGGAGCCCGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200200000000000000
..................................................................................................................................................................................................................................................................................................................................................CTGAGCAAT---GCGAG---CAC---AGG---A..............................................................................................................2111.00100000000000100000
............................................................TGAGAATGCGGAGCCCGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
........................................................ACGCTGAGAATGCGGAGCCCGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................T---GCGAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------ACC---C--GA.............2711.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................GAGCAAT---GCGAG---CAC---A....................................................................................................................1611.00100000000001000000
droSec2
GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCCGTGGCTACGACAGCGAA---------------TGCTTCAAGGCCAGGTGAGTGT--T-TGCATG----------------------ACGCA-----------------------TCACA---ATA-GGTTC----------------------------------------GTCA----------ATA---A---------C----------A----------TC-TCTCGATTTCGCAA---------CAGGCGA--AATCCTGAGCAAT---GCGAG---CAC---AGG---AGGA-----------------------------------------------------------------------GGCAA-------ACC---C--GATGTCCAGGCA-AASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................GAATGCGGAGCCCGTGGCTACGA...........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
droYak3
AGCAGCAGCAGCAACAACAGCACCAACAACAAAAGCGTTTGCGACGGAGACGGAAAACGCAGAGAATGCGGAGCCAGTGGCAACGATAGCGAA---------------TGCTTCAAGGCCAGGTGAGTGT--T-TGCATG----------------------ACGCA-----------------------TCACT---GTA-GACAC----------------------------------------GTCC----------ATG---T---------C----------A----------TC-TCCCGATTTCGCCA---------CAGTCGC--CATCCTGAGCAAT---GCGGC---CGC---AGG---AAAG-----------------------------------------------------------------------GGTAA-------AAC---C--GATGCCCAGGT--CASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................GAGAATGCGGAGCCAGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
............................................................AGAGAATGCGGAGCCAGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
....................................................................................GATAGCGAA---------------TGCTTCAAGGCC.........................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
...................................................................GCGGAGCCAGTGGCAACGATAGCGA.....................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...........................................................CAGAGAATGCGGAGCCAGTGGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..........................................................GCAGAGAATGCGGAGCCAGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAA-------AAC---C--GATGCCCAGGT--..1911.00101000000000
.GCAGCAGCAGCAACAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
droEre2
GG---------------------------------------------------AAAACGCTGAGAATGCGGAGCCCGTGGCTA---CAGCGAA---------------TGCTTCAAGGCCAGGTGAGTGT--T-TGCATG----------------------ACGCA-----------------------TCACT---ATA-GATAC----------------------------------------GTCC----------ATG---A---------C----------A----------TC-TCTCGATTTCACCA---------CAGTCGC--CATCCTGAGCAAT---GCGAC---CGT---GGG---AAAG-----------------------------------------------------------------------GGTAA-------ACCCCCC--GATGCCCAGGTG-AASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................AGCAAT---GCGAC---CGT---GGG---AAAG-----------------------------------------------------------------------....................................2111.0010000100

Generated: 05/16/2015 at 09:28 PM