ID:

dvi_16654

 Coordinate:

scaffold_13047:12453831-12453892 +

 Confidence:

confident

 Class:

Mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.3 -13.9 -13.9

Flybase annnotation

intron [Dvir\GJ24312-in]; CDS [Dvir\GJ24312-cds]; CDS [Dvir\GJ24312-cds]

No Repeatable elements found

Sense Strand Reads

GGAACAGTGGCCAGTCACAGTCTGATGACATGGGTCAGGCGCTGCTCAATGTAAGTGCTTTGGTAATTTTGGTTGTTCCAAGTGAACCACTCACATTTCCAAAACACTACAGCTCTTTCGACGACTTATCTCGGAGGGATTGACGGAGACAATTGAGATGCA

**************************************************(((.(((.(((((.(((...(((.((((.....)))).)))...))).))))).))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047

female body

 SRR060681

Argx9_testes_total

 SRR060678

9x140_testes_total

 SRR060679

140x9_testes_total

 SRR060664

9_males_carcasses_total

 SRR060672

9x160_females_carcasses_total

 SRR060671

9x160_males_carcasses_total

 SRR060680

 9xArg_testes_total

 SRR060665

9_females_carcasses_total

 SRR060668

160x9_males_carcasses_total

 SRR060667

160_females_carcasses_total

 SRR060676

9xArg_ovaries_total

 SRR060677

Argx9_ovaries_total

 M028

head

 SRR060669

160x9_females_carcasses_total

 V053

head

 SRR060674

9x140_ovaries_total

 M061

embryo

 SRR2096056

Ovary_Min_46		 SRR060666

160_males_carcasses_total

 SRR060682

9x140_0-2h_embryos_total

 SRR2096059

Ovary_Min_164		 SRR060675

140x9_ovaries_total

 SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		 SRR2096060

Ovary_Min_193		 SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		 SRR2096058

Ovary_Min_98		 SRR2096055

Ovary_Min_43		 SRR060689

160x9_testes_total

 SRR060685

9xArg_0-2h_embryos_total

 SRR060686

Argx9_0-2h_embryos_total

 SRR060683

160_testes_total

 SRR060670

9_testes_total

 SRR060684

140x9_0-2h_embryos_total

 SRR060687

9_0-2h_embryos_total

 V116

male body		 SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		 SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers		 M027

male body		 SRR2096057

Ovary_Min_50		 SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		 SRR2096013

Ovary_Strain_9_oxidized		 SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		 SRR2096014

Ovary_Strain_160_oxidized		 SRR060655

9x160_testes_total

 SRR060673

9_ovaries_total

 SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		 SRR060656

9x160_ovaries_total

 GSM1528803

follicle cells		 SRR060657

140_testes_total

 SRR1106730

embryo_16-30h

 SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		 V047

embryo

 SRR060654

160x9_ovaries_total

 SRR060659

Argentina_testes_total

 SRR060662

9x160_0-2h_embryos_total

 SRR060663

160_0-2h_embryos_total

 SRR060688

160_ovaries_total

 SRR1106729

mixed whole adult body

 SRR060658

140_ovaries_total

 SRR060660

Argentina_ovaries_total

 SRR1106720

embryo_8-10h

 SRR1106727

larvae

 SRR1106722

embryo_10-12h

 SRR1106719

embryo_8-10h

 SRR1106723

embryo_12-14h

 SRR1106725

embryo_14-16h
..........................................................................................TCACATTTCCAAAACACTACAG.................................................. 22 0 1 4456.00 4456 1839 296 264 247 164 129 126 109 97 87 90 84 71 61 47 26 55 36 54 36 42 47 37 30 41 26 39 35 8 23 22 13 4 20 18 2 13 17 14 14 15 5 10 9 1 1 10 2 0 0 4 7 1 1 0 1 0 1 1 0 0 1 1 1 0 1 0
..........................................................................................TCACATTTCCAAAACACTACA................................................... 21 0 1 925.00 925 548 33 30 28 32 17 38 19 18 25 16 7 7 6 27 12 7 3 0 9 4 0 4 3 0 5 0 1 0 1 5 0 1 3 1 0 3 2 2 0 0 0 0 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAACACTACAG.................................................. 21 0 1 177.00 177 165 1 1 1 0 0 0 0 0 0 1 0 0 2 1 0 2 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGT......................................................................................... 23 0 1 140.00 140 7 6 4 6 4 2 0 4 2 2 1 3 6 1 1 7 2 0 0 2 2 2 2 0 2 0 0 0 8 0 0 4 7 0 1 11 0 2 0 0 0 0 0 3 9 7 0 4 2 2 0 1 3 3 2 1 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTAC.................................................... 20 0 1 123.00 123 65 3 3 5 3 5 7 1 1 4 3 1 1 2 8 1 0 2 0 2 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAACACTACAGT................................................. 22 1 1 97.00 97 6 6 5 8 7 9 6 1 3 4 2 2 4 3 1 5 0 2 3 2 1 2 0 0 1 0 0 1 0 1 0 3 1 0 1 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 1
..................................................GTAAGTGCTTTGGTAATTTTGG.......................................................................................... 22 0 1 81.00 81 11 1 5 4 1 0 1 1 0 0 0 1 0 4 0 13 0 0 0 0 0 0 1 2 0 1 0 0 6 0 0 1 5 0 1 4 0 0 1 0 0 1 0 0 2 2 0 2 0 3 0 0 0 1 0 1 1 1 0 1 2 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAACACTACA................................................... 20 0 1 51.00 51 50 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAGT................................................. 23 1 1 47.00 47 6 4 2 6 1 3 1 2 0 2 4 1 1 1 1 0 1 3 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTC........................................................................................ 24 1 1 47.00 47 7 7 5 7 0 3 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 3 0 0 2 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................ACATTTCCAAAACACTACAG.................................................. 20 0 1 32.00 32 15 4 3 2 0 2 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................ATTTCCAAAACACTACAG.................................................. 18 0 1 28.00 28 22 1 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTG........................................................................................... 21 0 1 23.00 23 1 1 2 3 0 0 0 0 0 0 0 0 1 0 1 4 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTTGT...................................................................................... 26 0 1 21.00 21 0 0 0 0 0 0 0 2 0 1 0 2 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 0 0 1 0 0 4 0 0 0 0 1 3 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CATTTCCAAAACACTACAG.................................................. 19 0 1 19.00 19 16 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAGA................................................. 23 1 1 18.00 18 6 1 4 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTTG....................................................................................... 25 0 1 15.00 15 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 2 0 0 0 2 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAA.................................................. 22 1 1 15.00 15 6 3 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTCACATTTCCAAAACACTACAG.................................................. 23 0 1 14.00 14 8 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ACATTTCCAAAACACTACA................................................... 19 0 1 12.00 12 6 0 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAAGTGCTTTGGTAATTTTGGT......................................................................................... 22 0 1 10.00 10 1 0 1 1 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAC.................................................. 22 1 1 10.00 10 3 2 1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATCACATTTCCAAAACACTACAG.................................................. 23 1 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ACATTTCCAAAACACTACAGT................................................. 21 1 1 9.00 9 4 0 0 1 0 0 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAGAACACTACAG.................................................. 22 1 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAAGTGCTTTGGTAATTTTGG.......................................................................................... 21 0 1 8.00 8 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCATATTTCCAAAACACTACAG.................................................. 22 1 1 8.00 8 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAACACTACAGTT................................................ 23 1 1 7.00 7 0 0 0 0 2 1 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGTT......................................................................................... 23 1 1 7.00 7 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAT.................................................. 22 1 1 7.00 7 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTA..................................................... 19 0 1 7.00 7 3 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTT........................................................................................ 24 0 1 7.00 7 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTCC....................................................................................... 25 2 1 6.00 6 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................ACACATTTCCAAAACACTACAG.................................................. 22 1 1 6.00 6 2 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCACAACACTACAG.................................................. 22 1 1 6.00 6 3 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTACATTTCCAAAACACTACAG.................................................. 22 1 1 5.00 5 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CCACATTTCCAAAACACTACAG.................................................. 22 1 1 5.00 5 1 0 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACT...................................................... 18 0 1 5.00 5 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCAAATTTCCAAAACACTACAG.................................................. 22 1 1 5.00 5 2 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAACACTACAGA................................................. 22 1 1 5.00 5 2 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACGTTTCCAAAACACTACAG.................................................. 22 1 1 5.00 5 1 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAAGTGCTTTGGTAATTTTGGTC........................................................................................ 23 1 1 5.00 5 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTCACATTTCCAAAACACTACA................................................... 22 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTCCAG.................................................. 22 1 1 4.00 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTAAAG.................................................. 22 1 1 4.00 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TCATTTCCAAAACACTACAG.................................................. 20 1 1 3.00 3 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTAA....................................................................................... 25 2 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCTAAAACACTACAG.................................................. 22 1 1 3.00 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTGTTCCAAGTGAACCACTCACATT................................................................. 25 0 1 3.00 3 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAGC................................................. 23 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTGTTCCAAGTGAACCACTCACATTTCC.............................................................. 28 0 1 3.00 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTACAAAACACTACAG.................................................. 22 1 1 3.00 3 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAAA................................................. 23 2 1 3.00 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AAGTGCTTTGGTAATTTTGGTT........................................................................................ 22 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TTAAGTGCTTTGGTAATTTTGGT......................................................................................... 23 1 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTTGTTC.................................................................................... 28 0 1 3.00 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGACATTTCCAAAACACTACAG.................................................. 22 1 1 3.00 3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCCAAACACTACAG.................................................. 22 1 1 3.00 3 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TGTTCCAAGTGAACCACTCACATTTCC.............................................................. 27 0 1 3.00 3 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATCTCCAAAACACTACAG.................................................. 22 1 1 3.00 3 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTATAG.................................................. 22 1 1 3.00 3 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AAGTGCTTTGGTAATTTTGGTTG....................................................................................... 23 0 1 3.00 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATCACATTTCCAAAACACTACA................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTGCAG.................................................. 22 1 1 3.00 3 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACCG.................................................. 22 1 1 3.00 3 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGTTT........................................................................................ 24 1 1 3.00 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTACCAAAACACTACAG.................................................. 22 1 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAAGTGCTTTGGTAATTTTGGTT........................................................................................ 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACGCTACAG.................................................. 22 1 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTGTTCCAAGTGAACCACTCACAT.................................................................. 24 0 1 2.00 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACGG.................................................. 22 1 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................ATCTCACATTTCCAAAACACTACAG.................................................. 25 2 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAACACACTACAG.................................................. 22 1 1 2.00 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTA........................................................................................ 24 1 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACCACAG.................................................. 22 1 1 2.00 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTTGTT..................................................................................... 27 0 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTATA................................................... 21 1 1 2.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CATTTCCAAAACACTACA................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAGTC................................................ 24 2 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTGTTCCAAGTGAACCACTC...................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACAGTTCCAAAACACTACA................................................... 21 1 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TGTTCCAAGTGAACCACTCACATTT................................................................ 25 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................ATTTCCAAAACACTACAGTT................................................ 20 1 1 2.00 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCGAAACACTACAG.................................................. 22 1 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTTCAAAACACTACAG.................................................. 22 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GGAAGTGCTTTGGTAATTTTGGT......................................................................................... 23 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GACTTATCTCGGAGGGATT..................... 19 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCGCATTTCCAAAACACTACAG.................................................. 22 1 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGTTC........................................................................................ 24 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACCTTTCCAAAACACTACAG.................................................. 22 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TTCACATTTCCAAAACACTACAG.................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TGTTCCAAGTGAACCACTCACATTTC............................................................... 26 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACACTTCCAAAACACTACAG.................................................. 22 1 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACTTTTCCAAAACACTACAG.................................................. 22 1 1 2.00 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TTGGTAATTTTGGTTGTTCCAAGTGA............................................................................. 26 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACAATACAG.................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTTT....................................................................................... 25 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTT............................................................................................ 20 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCATATTTCCAAAACACTACA................................................... 21 1 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................ACATGGGTCAGTCGGTCCT.................................................................................................................... 19 3 13 1.31 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 9 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGCAATTTTGGT......................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CATTTCCAAAACACTACAGT................................................. 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GGAAGGGCTTTGGTAATTTTGGT......................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTAAA...................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAACACTAC.................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCACAACACTACA................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACATT................................................. 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CCACGTTTCCAAAACACTACAG.................................................. 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GATTCACATTTCCAAAACACTACAG.................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................ATGCTCACATTTCCAAAACACTACAG.................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACGTTTCCAAAACACTACA................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................CCACTCACATTTCCAAAACACTACAGTT................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CCAAATCACATTTCCAAAACACTACAG.................................................. 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GCTTCACATTTCCAAAACACTACAG.................................................. 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGGGCTTTGGTAATTTTGGT......................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................GTCACATTTCCAAAACACTACA................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ACATTTCCAAAACACTACAGTC................................................ 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAGGTGCTTTGGTAATTTCTG.......................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAACCACTACAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTCCA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TTAAGTGCTTTGGTAATTTTGG.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CACTACAGCTCTTTTGACGAGT.................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TAGCATTTCCAAAACACTACAG.................................................. 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................AAATTCACATTTCCAAAACACTACAG.................................................. 26 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCATAACACTACAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACGACAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTACCAAAACACTACA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TGTTCCAAGTGAACCACTCACATTTTCCC............................................................ 29 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GCCGTCACATTTCCAAAACACTACAG.................................................. 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GATGACATGGGTCAGGCGCTGCTCAAT................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GTGGCCAGTCACAGTCTGATG....................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGCTTTGGTAATTTTGGTTGTT..................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TTCACATTTCCCAAACACTACAG.................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTACCTTTCCAAAACACTACAG.................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TAACATTTCCATAACACGACAG.................................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AGTCACATTTCCAAAACACTACAG.................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AACATTTCCAAAACACTACAG.................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTGCAAAACACTACAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GACATTTCCAAAACACTACAG.................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCGAAAACACTACA................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTGCA................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................ATAAGTGCTTTGGTAATTTTGTT......................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTACTTTTGGT......................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TCTCACATTTCCAAAACACTACA................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATGTCCAAAACACTACA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCCCATTTCCAAAACACTACAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCAGATTTCCAAAACACTACAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGTGCTTTGGTAATTTTGGTT........................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GGAATTGACGGAGACGATT........ 19 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAGCGA............................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAAGTGCTTTGGTAATCTTGGTC........................................................................................ 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................ACTCACATTTCCAAAACACTACTG.................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................AGTAAGTGCTTTGGTAATTTTG........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACAGTTCCAAAACACTACAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCATAACACTAC.................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AATTTCCAAAACACTACA................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTTGTT........................................................................................ 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTCT....................................................................................... 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GACGACTTATCTCGGAGGGA....................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..................................................GTAAGTGCTTTGGTAATTTTTG.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..........................................................................................TCACATTTCCAAAACAGTACAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..................................................GAAAGCGCTGTGGTAATTTTGGT......................................................................................... 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTGTTCCAAGTGAACCACT....................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAGAAA............................................... 25 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAAGTGCTTTGGTAATTTTGT.......................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAGG................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................GCTCACATTTCCAAAACACTACAG.................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACTG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACAACAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTT............................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CACTCACATTTCCAAAACA........................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTAAAA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAACACACTACAGT................................................. 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................GCACATTTCCAAAACACTACA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CACTCACATTTCCAAAACACTACAG.................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAGCACTACAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAATACTACAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGGAATGTTGGTC........................................................................................ 24 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGACATTTCCCAAACACTACAG.................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AAGTGCTTTGGTAATTTTGGTTAA...................................................................................... 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAACACTACAA.................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TGTTCCAAGTGAACCACTCACA................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TAACATTTCCAAAACACTACA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAGACACTACAG.................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTTGT......................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GGAAGCGCTTTGGTAATTTTGGT......................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAGAACACTACAGT................................................. 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACCTTTCCAAAACACTAC.................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAAGTGCTTTGGTAATTTTGGTAA....................................................................................... 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTTCAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACCTTTCCAAAACACTACA................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGGTTTTT..................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCAAATTTCCAAAACACTACA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AATCTTGGTTGTTCCAAGTGAACC.......................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAACACACTACA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTACGAAACACTACAG.................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................CCAAGTGAACCACTCACATTTCCAAAACACTACAGTT................................................ 37 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................ATCACTCACATTTCCAAAACACTACA................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGGGCTTTGGTAATTTTGG.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GACTTATCTCGGAGGGATTGACGGAGAC............ 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GAAAGTGCTTTGGTAATTTTGGTCT....................................................................................... 25 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GCAAGTGCTTTGGTAATTTTGGTT........................................................................................ 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CCGTCTCACATTTCCAAAACACTACAG.................................................. 27 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CACTCACATTTCCAAAACACT...................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATCTCCAAAACACTACA................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCCTTGGTAATTTTGGT......................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAACACTACAGAA................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAGAACACTACA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TAGCTCACATTTCCAAAACACTACAG.................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................GCACATTTCCAAAACACTACAG.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................TTTTGGTTGTTCCAAGTGAACC.......................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCAGATTTCCAAAACACTACA................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATATCCAAAACACTACA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GGAAGTGCTTTGGTAATTTTGG.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ACAGCCTGATGACATGGGTCAGGC.......................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GTGCTTTGGTAATTTTGG.......................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACAACA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CGTAAGTGCTTTGGTAATTTTGG.......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTACTTTTGGTC........................................................................................ 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAAGTGCTTTGGTAATTTTTG.......................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGTTTGT...................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTCCCAAAACACTACA................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACT................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGACATTTCCAAAACACTACA................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ACATTTCCAAATCACTACAG.................................................. 20 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TTCACATTTCCAAAACACTACAC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TGGGTCAGGCGCTGCTCA.................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....AGTGGCCAGTCACAGTCTGATGAC..................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................CCTATCACATTTCCAAAACACTACA................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................AGCTCACATTTCCAAAACACTACAG.................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GAAAGTGCTTTGGTAATTTTGTT......................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTT........................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAACACTAA.................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCTCATTTCCAAAACACTACAG.................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TTAAGTGCTTTGGTAATTTTGGTC........................................................................................ 24 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTATGTGCTTTGGTAATTTTGGT......................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTTGTTG....................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAGCACTACAG.................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................ATAAGTGCTTTGGTAATTTTGG.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTTCAAAACACTAC.................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AAGTGCTTTGGTAATTTTGGT......................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................ACACATTTCCAAAACACTACA................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACTACAGGCA............................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGTAATTTTGC.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGCTTTGGGAATTTTGGTC........................................................................................ 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAATACTACAGT................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTCCCAAAACACTCCCG.................................................. 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTCCAAAACACGACAA.................................................. 22 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................ATTTCCAAAACACTACAT.................................................. 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CACATTTCCAAAACATTACAGT................................................. 22 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGATTTGGTAATTTTTCT......................................................................................... 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTTAGACGACTTATCGCGTA........................... 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................ACAGCCATTTCGACGACTT................................... 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CCACTTCCAAAACACTACAGT................................................. 21 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AGTTTCCAAAACACTACAG.................................................. 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GACATGGGTCAGTCGATCCT.................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................ACATGGGTTAGTCGCTCCT.................................................................................................................... 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................CTTTGGTAATTTTGGTCC....................................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCACATTTTCATAGCACTACA................................................... 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TCTTTGGTGATTTTGGTTGTTT.................................................................................... 22 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................ACATGGGTCAGTCGGTTCT.................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GTTTGATGACATGGTTGAG............................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CCTTGTCACCGGTCAGTGTCAGACTACTGTACCCAGTCCGCGACGAGTTACATTCACGAAACCATTAAAACCAACAAGGTTCACTTGGTGAGTGTAAAGGTTTTGTGATGTCGAGAAAGCTGCTGAATAGAGCCTCCCTAACTGCCTCTGTTAACTCTACGT

**************************************************(((.(((.(((((.(((...(((.((((.....)))).)))...))).))))).))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060684

140x9_0-2h_embryos_total

 SRR060687

9_0-2h_embryos_total

 M047

female body

 SRR060665

9_females_carcasses_total

 SRR060662

9x160_0-2h_embryos_total
........CGGGTCAGTGTCAGACTA........................................................................................................................................ 18 1 1 2.00 2 1 1 0 0 0
...............................CCAAGTCCGAGGCGAGTTAC............................................................................................................... 20 3 5 0.20 1 0 0 1 0 0
..............................................................................................................TCGAGGAAGCTGCTGAAGA................................. 19 2 5 0.20 1 0 0 0 1 0
......................................................CTCGAAACCATTTTAACCAA........................................................................................ 20 3 20 0.10 2 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droVir3 scaffold_13047:12453781-12453942 + dvi_16654 confident GGAACAGTGG-----------------------CCAGTCACAGTCTGATGACATGGGTCAGGCGCTGCTCAATGTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTTGTTC-CAAGTGAACCACTCACA-----TTTCCAAAACACTACAGCTCTTTCGACGACTTATCTCGGAGGGATTGACGGAGACAATTGAGATGCA
droMoj3 scaffold_6540:29363572-29363751 - dmo_212 confident GG-----TGGCGAGGAATTACTCGTCCTGGAGCCCAACCGCAATTTGATGACATGGGTCAGACACTACTCAATGTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTCGGTC-CTATTGAACCACTCACA-----TTTCCAAAACACTACAGCTCTTTCGACGACTCATCTCGGAGGGATTGACGGACACCATTGAGTTGCA
droGri2 scaffold_14830:672691-672842 - dgr_111 confident CA----------------------------------GGCACAGCTGGAGGACATGGGACAGACACTGCGCAATGTAAGTGCTT------------------------------------------------------------TGGCAATTTCGGTCGTTCTCCAGCGAACCACTCACA-----TTTCCAAAACACTGCAGCTTTTCAGGCGGCTCAACTCGGAAGGACTAACGGAGACGATCGAGCTGCA
droWil2 scf2_1100000004921:3101070-3101203 + CG---------------------------------------------AGGATATGGGTCAGACGTTGCGTAATGTCAGTGAGA----------------CAAATTAA-T-------GGGT--TTTT-----------------GAGTAATTTTAA---------------------TGA-----T---TATTTAAATACAGCTTTTCAGACGCCTAACTTCCGAGGGACTAACGGATTCAATTGAGATGCA
dp5 2:42008-42147 - CG---------------------------------------------ACGACATGGGACAGACGCTGCGGAATGTGAGTGATATTTG--------------------AAGATTAGTGTCCAATCTCTATTAATTCCAA--------------------------------------CTT-----TT---TTTGAATTTAAGCTCTTTCGACGCCTCACTTCTGAAGGATTAACCGACCTAATTGAGATCCA
droPer2 scaffold_7:2832406-2832545 - CG---------------------------------------------ACGACATGGGACAGACGCTGCGGAATGTGAGTTATATTTG--------------------AAGATTAGTGTCCAATCTCTATTAATTCCAA--------------------------------------CTT-----TT---TTTGAATTTAAGCTCTTTCGACGCCTCACTTCTGAAGGATTAACCGACCTAATTGAGATCCA
droAna3 scaffold_13340:14472521-14472649 + GG------------------------------------------------AAATGGGTCAGACTTTAAGAAATGTAAGAAATACTA---------TTA--------T-T-----------------TA----------------------------------TTACTTAAAAACATATA-----ATGACTTGTTATGGCAGCTTTTCAGGCGCCTCTCCTCCGAGGGATTGACGGATCTCATTGAGATGCA
droBip1 scf7180000395971:697068-697193 - GG------------------------------------------------AAATGGGACAGACCTTAAGAAATGTAAGTAATA----------------TTAACTAA-A--------------TT------------------TTGTAATC-----------------------ATATT-----ATGACGTTTTGTGGCAGCTTTTCAGGCGCCTCTCCTCTGAGGGATTGACGGATCTCATTGAGATGCA
droKik1 scf7180000301923:202882-203004 + AG-------------------------------------------------------------------GAATGTGAGTGGAGTTGGGAAGACACTTA--TAAATCA-C--------------TT------------------TTATAATTTTAT---------------------GTT-----TTTCTTTACATTTGCAGTTGTTTAGACGCCTCTCCTCCGAGGGCTTGACGGACCTCATTGAGATGCA
droFic1 scf7180000454106:2111216-2111349 + GG------------------------------------------------AAATGGGACAGACCCTCAGGAATGTGAGTAATT----------------GTGCTTAA-AGTTTT-----------GTATAGATTCAAC------------------------------------ATTTA-----ATAACATTCATTTGCAGCTTTTCAGGCGTCTTAGCTCTGAGGGACTGACCGATCTCATTGAAACGCA
droEle1 scf7180000491194:220511-220565 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCTTTTCAGACGCCTTAGCTCTGAGGGATTGACGGACCTTATAGAGATGCA
droRho1 scf7180000779488:280688-280828 - CG---------------------------------------------AGGAGATGGGGCAGACGCTGAGGAATGTGAGTATAAGT--------------TTCTTTA-AAGTTTAA-------GCTATAT--TTTTTAA--------------------------------------TTTTT---ACAATATCCATTTACAGCTTTTTAGACGCCTAAGCTCTGAGGGATTGACGGATCTCATTGAGATGCA
droBia1 scf7180000302402:7801030-7801179 - GGA----------------------------ACAGTGCCGCAGTTTGAGGAGATGGGGCAGACCCTGAGGAATGTAAGTAGAT----------------ATTCTTTT-C-------------TT-------------------TTGAAATTCTGT---------------------ATA--CT-TATGCATTTATTTGCAGCTCTTTAGGCGACTGAGCTCTGAGGGATTAACGGATCTAATTGAAATGCA
droTak1 scf7180000415364:57343-57397 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCTGTTTAGACGCCTAATCTCTGAGGGTTTGACAAATCTAAATGAGATGCA
droEug1 scf7180000407340:34249-34403 + GGA----------------------------GCTACGCCACAGTACGAAGAGATGGGACAAACTCTGAGGAATGTGAGTAGAT----------------TTGGTTGT-TTTTTA-----------ATATGAATTT-----------------TGT---------------------TTA--ATTTTGCCATTCACTTACAGCTTTTCAGGCGCCTAAGCTCTGAGGGATTAACGGATCTTATTGAAATGCA
dm3 chr3R:5068719-5068851 - CG---------------------------------------------AGGAGATGGGACAGACCTTGCGTAATGTATGTGGAT----------------TAGATCAA-A-------------ATTGTATAAATTGTAA--------------------------------------ATT-----GTTCCTTTAACGTGCAGCTCTTTAGACGCTTAAGCTCTGAGGGATTAACGGATCTAATTGAGATGCA
droSim2 3r:15944747-15944882 + dsi_1222 CG---------------------------------------------AGGAGATGGGACAGACTCTGCGTAATGTAAGTGGAT----------------TAGATCAA-A-------------ATTGTATAAATGGTAAATTGTTGGTA----------------------------------------ATTTAACTTGCAGCTCTTTAGACGCCTAAGCTCTGAGGGTTTAACGGATCTCATTGAGATGCA
droSec2 scaffold_0:16813376-16813508 + CG---------------------------------------------AGGAGATGGGACAGACCCTGCGTAATGTAAGTGGAT----------------TGGATCAA-A-------------ATTGTATAAATGGTAA--------------------------------------ATT-----GTTCCCTTAACTTGCAGCTCTTTAGACGCCTAAGCTCTGAGGGTTTAACGGATCTCATTGAGATGCA
droYak3 3R:9121139-9121295 - GGA----------------------------ACTCTGCCGCAGTACGAGGAGATGGGACAGACCCTGCGGAATGTAAGTGTAACTTT---------AATGTAATTAA-A-------------GTCATATGAATTGTAA--------------------------------------TTT-----ATTCCCTCAACTTGAAGCTTTTTAGACGCCTAAGCTCTGAGGGCCTAACGGATCTCATTGAGATGCA
droEre2 scaffold_4770:16531455-16531604 + GGA----------------------------ACTCTGCCGCAGTACGAGGAGATGGGACAGACCCTGCGCAATGTAAGCGGAT----------------TAAACTAG-A-------------GCTATATGCCCTCTAA--------------------------------------TTT-----GTACCCTTAACTTGCAGCTTTTTAGACGCCTTAGCTCCGAGGGCTTAACGGATCTCATTGAGATGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GGAACAGTGG-----------------------CCAGTCACAGTCTGATGACATGGGTCAGGCGCTGCTCAATGTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTTGTTC-CAAGTGAACCACTCACA-----TTTCCAAAACACTACAGCTCTTTCGACGACTTATCTCGGAGGGATTGACGGAGACAATTGAGATGCASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAG..................................................2214456.00445614611839361120000010164973690874741261291553784712642471092964213202322181800000000101100010141262059263015355414394741101071317
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACA...................................................211925.00925265483000000000032189162527138170747730281933403151000000000000000000030012000353010000020032
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAG..................................................211177.00177021650000000000000010100002000110100010000000000000000000000000000000010100000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGT...............................................................................................231140.0014001703942120011422121702722364646240001080000000000000000000371120300000002200102
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTAC....................................................201123.0012332652000000000031234807500011351300010000000000000000000000001000010000000000010
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAGT.................................................22197.00970362000000000173224116910024581613010100000000001000010100005000000013102110000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGG................................................................................................22181.0081141101223102011100000510201105411010001160000000000000000000013401012000000000000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACA...................................................20151.005100500000000000001000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGT.................................................23147.00470163000000000010042101301011262400200201000000000000000000100000010010000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTC..............................................................................................24147.00471270010000000002000030300000570702000002000000010000000000000211000000000000000
................................................................................................................................................................................ACA-----TTTCCAAAACACTACAG..................................................20132.003200150000000000000000000200001320410010000000000000000000000001000000001000100000
..................................................................................................................................................................................A-----TTTCCAAAACACTACAG..................................................18128.002800221000000000000000100000110001100000000000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTG.................................................................................................21123.00230010001003000000000110000001230100000000000000000000000000004100002100000000010
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTTGT............................................................................................26121.00210100100000000000001000000120002010100001000000000000000000000001010000000013040
.................................................................................................................................................................................CA-----TTTCCAAAACACTACAG..................................................19119.001900160000000000000000000000000001100010000000000000000000000000000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGA.................................................23118.00180060000000000000001000000001400100000100000000000000000000000000021000000000010
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTTG.............................................................................................25115.00150000000000101100000000000000200002000002000000000000000000000203000000010000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAA..................................................22115.00150060000000000000000000000001110300002000000000000000000000000000000010000000000
.............................................................................................................................................................................CTCACA-----TTTCCAAAACACTACAG..................................................23114.00140080000000000000000000000100300000011000000000000000000000000000000000000000000
................................................................................................................................................................................ACA-----TTTCCAAAACACTACA...................................................19112.00120060000000000000000001000000121000000100000000000000000000000000000000000000000
..........................................................................TAAGTGCTT------------------------------------------------------------TGGTAATTTTGGT...............................................................................................22110.00100010000100000000010000101000110000000000000000000000000000001001000100000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAC..................................................22110.00100430000000000000000000000000100200000000000000000000000000000000000000000000000
................................................................................................................................................................................ACA-----TTTCCAAAACACTACAGT.................................................2119.0090040000000000000001003000000010000000000000000000000000000000000000000000000000
..........................................................................TAAGTGCTT------------------------------------------------------------TGGTAATTTTGG................................................................................................2118.0080110000100000000000000000000000100000000000000000000000000002000011000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAT..................................................2217.0070011000000000000100001100000100000000000000000000000000000001000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTA.....................................................1917.0070130000000000010000000000000000200000000000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTT..............................................................................................2417.0070001000000000000000000000000200001000001000000000000000000100100000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTCC.............................................................................................2516.0060000010000000010000000000000130000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACT......................................................1815.0050000000000000000000201000100000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAGA.................................................2215.0050020000000000000000000000010010100000000000000000000000000000000000000000000000
..........................................................................TAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTC..............................................................................................2315.0050000000000000000000000010000001001000000000000000000000000000020000000000000000
.............................................................................................................................................................................CTCACA-----TTTCCAAAACACTACA...................................................2214.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTAA.............................................................................................2513.0030000000000000000000000000100000010010000000000000000000000000000000000000000000
...........................................................................................................................................................TTGTTC-CAAGTGAACCACTCACA-----TT.................................................................2513.0030010000000000010000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGC.................................................2313.0030001000000000000000000000101000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TTGTTC-CAAGTGAACCACTCACA-----TTTCC..............................................................2813.0030000000000000000000000000000000100000000000000000000000000000100000001000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAAA.................................................2313.0030000000000000000000000000000000100000000000000000000000000000002000000000000000
...........................................................................AAGTGCTT------------------------------------------------------------TGGTAATTTTGGTT..............................................................................................2213.0030000000000000000100000000000000000100001000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTTGTTC-.........................................................................................2813.0030000000000000000000000000000100000000101000000000000000000000000000000000000000
............................................................................................................................................................TGTTC-CAAGTGAACCACTCACA-----TTTCC..............................................................2713.0030011000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................................AAGTGCTT------------------------------------------------------------TGGTAATTTTGGTTG.............................................................................................2313.0030000000000000000000000101000000000000000000000000000000000000000000000010000000
..........................................................................TAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTT..............................................................................................2312.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TTGTTC-CAAGTGAACCACTCACA-----T..................................................................2412.0020000000000000000000001000000010000000000000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTA..............................................................................................2412.0020000000000000010000000001000000000000000000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTTGTT...........................................................................................2712.0020001000000000000000000000000100000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CA-----TTTCCAAAACACTACA...................................................1812.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGTC................................................2412.0020100000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................TTGTTC-CAAGTGAACCACTC...........................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGTTC-CAAGTGAACCACTCACA-----TTT................................................................2512.0020010000000000001000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GACTTATCTCGGAGGGATT.....................1912.0020000000000000000000000000000000000000000000000000000000000000000000000200000000
............................................................................................................................................................TGTTC-CAAGTGAACCACTCACA-----TTTC...............................................................2612.0020010000000000000000000000000010000000000000000000000000000000000000000000000000
..................................................................................T------------------------------------------------------------TGGTAATTTTGGTTGTTC-CAAGTGA..................................................................................2612.0020000000000000000000000000020000000000000000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTTT.............................................................................................2512.0020000000010000000010000000000000000000000000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTT..................................................................................................2012.0020010000000000000000000000000100000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CA-----TTTCCAAAACACTACAGT.................................................2011.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTAAA............................................................................................2611.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTAC....................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACATT.................................................2311.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................ACA-----TTTCCAAAACACTACAGTC................................................2211.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................GATGACATGGGTCAGGCGCTGCTCAAT..................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000001000000000000000
......GTGG-----------------------CCAGTCACAGTCTGATG.........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................TGCTT------------------------------------------------------------TGGTAATTTTGGTTGTT...........................................................................................2211.0010000000000000000000000000000000000010000000000000000000000000000000000000000000
............................................................................AGTGCTT------------------------------------------------------------TGGTAATTTTGGTT..............................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGCGA...............................................2511.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTCT.............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................................................................................................................................................................GACGACTTATCTCGGAGGGA.......................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACC...................................................2111.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................TTGTTC-CAAGTGAACCACT............................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGAAA...............................................2511.0010000000000000000100000000000000000000000000000000000000000000000000000000000000
..........................................................................TAAGTGCTT------------------------------------------------------------TGGTAATTTTGT................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGG.................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTT...................................................................................................1911.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................CACTCACA-----TTTCCAAAACA........................................................1911.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CACTCACA-----TTTCCAAAACACTACAG..................................................2511.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AAGTGCTT------------------------------------------------------------TGGTAATTTTGGTTAA............................................................................................2411.0010000000000000000000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAA..................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGTTC-CAAGTGAACCACTCACA-----...................................................................2211.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................................TAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTAA.............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................GACTTATCTCGGAGGGATTGACGGAGAC............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................CACTCACA-----TTTCCAAAACACT......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000010000000000000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAGAA................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TTTTGGTTGTTC-CAAGTGAACC...............................................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................GTGCTT------------------------------------------------------------TGGTAATTTTGG................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACT...................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TGGGTCAGGCGCTGCTCA....................................................................................................................................................................................1811.0010000000000000000000000000000000000010000000000000000000000000000000000000000000
.....AGTGG-----------------------CCAGTCACAGTCTGATGAC.......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000010000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTT.................................................................................................2111.0010000000000000000000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTAA....................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AAGTGCTT------------------------------------------------------------TGGTAATTTTGGT...............................................................................................2111.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGGCA...............................................2511.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGC................................................................................................2211.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................A-----TTTCCAAAACACTACAT..................................................1820.5010010000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CTT------------------------------------------------------------TGGTAATTTTGGTCC.............................................................................................18100.1010000000000000000000010000000000000000000000000000000000000000000000000000000000
droMoj3
GG-----TGGCGAGGAATTACTCGTCCTGGAGCCCAACCGCAATTTGATGACATGGGTCAGACACTACTCAATGTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTCGGTC-CTATTGAACCACTCACA-----TTTCCAAAACACTACAGCTCTTTCGACGACTCATCTCGGAGGGATTGACGGACACCATTGAGTTGCASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAG..................................................2213288.0032882453511188001
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACA...................................................211572.005724640531000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAG..................................................211265.00265253000120
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGT...............................................................................................231207.00207351510184980
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAGT.................................................22173.007321042442
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTAC....................................................20157.005745000120
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACA...................................................20145.00454500000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTC..............................................................................................24140.004034011319
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGC.................................................23140.004024001150
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGT.................................................23137.00379112240
................................................................................................................................................................................ACA-----TTTCCAAAACACTACAG..................................................20134.003422000120
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGG................................................................................................22133.0033926628
..................................................................................................................................................................................A-----TTTCCAAAACACTACAG..................................................18127.002717000100
.................................................................................................................................................................................CA-----TTTCCAAAACACTACAG..................................................19120.00201500050
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAA..................................................22119.00191700020
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGC...............................................................................................23117.00171001150
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAGC.................................................22116.0016800080
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTCGGT...........................................................................................27115.0015401127
.............................................................................................................................................................................CTCACA-----TTTCCAAAACACTACAG..................................................23113.0013700060
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAC..................................................22111.00111000100
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTCG.............................................................................................25110.0010700003
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTG.................................................................................................2117.007210301
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGA.................................................2317.007200050
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAA..................................................2116.006600000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAT..................................................2215.005300200
.............................................................................................................................................................................CTCACA-----TTTCCAAAACACTACA...................................................2215.005400010
..........................................................................TAAGTGCTT------------------------------------------------------------TGGTAATTTTGGT...............................................................................................2214.004300001
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTCGGTC-.........................................................................................2814.004400000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTAC....................................................1914.004400000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGCT................................................2414.004201001
................................................................................................................................................................................ACA-----TTTCCAAAACACTACA...................................................1913.003200100
..............................................................................................................................................................................TCACA-----TTTCCAAAACACT......................................................1813.003300000
..........................................................................TAAGTGCTT------------------------------------------------------------TGGTAATTTTGG................................................................................................2113.003200001
............................................................................................................................................................................ACTCACA-----TTTCCAAAACACTACAG..................................................2413.003300000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGG.................................................2313.003200010
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTA.....................................................1913.003000030
.................................................................................................................................................................................CA-----TTTCCAAAACACTACA...................................................1813.003300000
................................................................................................................................................................................ACA-----TTTCCAAAACACTACAGT.................................................2113.003200010
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTT..................................................................................................2012.002100100
..........................................................................TAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTC..............................................................................................2312.002100001
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTCGG............................................................................................2612.002000020
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGCC................................................2412.002200000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAGA.................................................2212.002100010
............................................................................AGTGCTT------------------------------------------------------------TGGTAATTTTGGC...............................................................................................2011.001000010
.............................................................................................................................................................................CTCACA-----TTTCCAAAACACTACAT..................................................2311.001000010
...........................................................................AAGTGCTT------------------------------------------------------------TGGTAATTTTG.................................................................................................1911.001100000
....................................................................................................................................................................ATTGAACCACTCACA-----TTTCCAAAACAC.......................................................2711.001000010
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTA..............................................................................................2411.001010000
.............................................................................................................................................................................CTCACA-----TTTCCAAAACACTAC....................................................2111.001000010
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACATA.................................................2211.001100000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGCTC...............................................2511.001100000
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACT...................................................2111.001100000
...........................................................................AAGTGCTT------------------------------------------------------------TGGTAATTTTGGTC..............................................................................................2211.001100000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAGTC................................................2311.001100000
...................................................................................................................................................AATTTTGGTCGGTC-CTATTGA..................................................................................2111.001000001
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGAGG...............................................2511.001100000
...........................................................................AAGTGCTT------------------------------------------------------------TGGTAATTTTGGTCG.............................................................................................2311.001100000
........................................................................TGTAAGTGCTT------------------------------------------------------------TGGTAATTTTGG................................................................................................2311.001100000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGAC...............................................................................................2311.001000010
....................................................................................................................................................................................................................................TTGACGGACACCATTGAGTTG..2111.001100000
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGTAATTTTGGTCGGC...........................................................................................2711.001000010
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACG...................................................2111.001000010
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTACAGCA................................................2411.001100000
..........................................................................TAAGTGCTT------------------------------------------------------------TGGTAATTTTGGC...............................................................................................2211.001000010
..................................................................................................................................................................................A-----TTTCCAAAACACTACAC..................................................1811.001000010
..........................................................................................................................................................................CCACTCACA-----TTTCCAAAACA........................................................2011.001100000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAC..................................................2111.001100000
...............................................................................................................................................................................CACA-----TTTCCAAAACACTACAGTA................................................2311.001000010
........................................................................................................................................................................................TTTCCAAAACACTACAGTCA...............................................20110.091100000
droGri2
CA----------------------------------GGCACAGCTGGAGGACATGGGACAGACACTGCGCAATGTAAGTGCTT------------------------------------------------------------TGGCAATTTCGGTCGTTCTCCAGCGAACCACTCACA-----TTTCCAAAACACTGCAGCTTTTCAGGCGGCTCAACTCGGAAGGACTAACGGAGACGATCGAGCTGCASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTGCAG..................................................221456.004564479
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTGCA...................................................21134.0034340
...............................................................................................................................................................................CACA-----TTTCCAAAACACTGCAG..................................................21134.0034340
...............................................................................................................................................................................CACA-----TTTCCAAAACACTGCA...................................................2016.00660
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTGC....................................................2015.00550
..................................................................................................................................................................................A-----TTTCCAAAACACTGCAG..................................................1814.00440
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTGCAGT.................................................2314.00440
................................................................................................................................................................................ACA-----TTTCCAAAACACTGCAG..................................................2013.00330
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTGCAT..................................................2213.00330
.................................................................................................................................................................................CA-----TTTCCAAAACACTGCAG..................................................1913.00330
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGCAATTTCGG................................................................................................2212.00220
.........................................................................GTAAGTGCTT------------------------------------------------------------TGGCAATTTCGGT...............................................................................................2312.00220
.................................................................................................................................................................................CA-----TTTCCAAAACACTGCA...................................................1811.00110
...............................................................................................................................................................................CACA-----TTTCCAAAACACTGCAT..................................................2111.00110
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTGCAGC.................................................2311.00110
..............................................................................................................................................................................TCACA-----TTTCCAAAACACTGCT...................................................2111.00110
...............................................................................................................................................................................CACA-----TTTCCAAAACACTGCAA..................................................2111.00110
droWil2
CG---------------------------------------------AGGATATGGGTCAGACGTTGCGTAATGTCAGTGAGA----------------CAAATTAA-T-------GGGT--TTTT-----------------GAGTAATTTTAA---------------------TGA-----T---TATTTAAATACAGCTTTTCAGACGCCTAACTTCCGAGGGACTAACGGATTCAATTGAGATGCASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................................................................................TTCAGACGCCTAACTTCCGAGGGA.......................2411.00100010
dp5
CG---------------------------------------------ACGACATGGGACAGACGCTGCGGAATGTGAGTGATATTTG--------------------AAGATTAGTGTCCAATCTCTATTAATTCCAA--------------------------------------CTT-----TT---TTTGAATTTAAGCTCTTTCGACGCCTCACTTCTGAAGGATTAACCGACCTAATTGAGATCCASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.........................................................ACAGACGCTGCGGAATGTGAG.............................................................................................................................................................................2111.0010100000000
.........................................................ACAGACGCTGCGGAATGTGA..............................................................................................................................................................................2011.0010000001000
droPer2
CG---------------------------------------------ACGACATGGGACAGACGCTGCGGAATGTGAGTTATATTTG--------------------AAGATTAGTGTCCAATCTCTATTAATTCCAA--------------------------------------CTT-----TT---TTTGAATTTAAGCTCTTTCGACGCCTCACTTCTGAAGGATTAACCGACCTAATTGAGATCCASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...............................................................................................................................................................................................................CGACGCCTCACTTCTGAAGG........................2011.001100000
droAna3
GG------------------------------------------------AAATGGGTCAGACTTTAAGAAATGTAAGAAATACTA---------TTA--------T-T-----------------TA----------------------------------TTACTTAAAAACATATA-----ATGACTTGTTATGGCAGCTTTTCAGGCGCCTCTCCTCCGAGGGATTGACGGATCTCATTGAGATGCASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.........................................................................................................................................................................................................CTTTTCAGGCGCCTCTCCTCC.............................2111.001100000
droBip1
GG------------------------------------------------AAATGGGACAGACCTTAAGAAATGTAAGTAATA----------------TTAACTAA-A--------------TT------------------TTGTAATC-----------------------ATATT-----ATGACGTTTTGTGGCAGCTTTTCAGGCGCCTCTCCTCTGAGGGATTGACGGATCTCATTGAGATGCASizeHit CountTotal NormTotal
No Reads
droKik1
AG-------------------------------------------------------------------GAATGTGAGTGGAGTTGGGAAGACACTTA--TAAATCA-C--------------TT------------------TTATAATTTTAT---------------------GTT-----TTTCTTTACATTTGCAGTTGTTTAGACGCCTCTCCTCCGAGGGCTTGACGGACCTCATTGAGATGCASizeHit CountTotal NormTotal
No Reads
droFic1
GG------------------------------------------------AAATGGGACAGACCCTCAGGAATGTGAGTAATT----------------GTGCTTAA-AGTTTT-----------GTATAGATTCAAC------------------------------------ATTTA-----ATAACATTCATTTGCAGCTTTTCAGGCGTCTTAGCTCTGAGGGACTGACCGATCTCATTGAAACGCASizeHit CountTotal NormTotal
No Reads
droEle1
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCTTTTCAGACGCCTTAGCTCTGAGGGATTGACGGACCTTATAGAGATGCASizeHit CountTotal NormTotal
No Reads
droRho1
CG---------------------------------------------AGGAGATGGGGCAGACGCTGAGGAATGTGAGTATAAGT--------------TTCTTTA-AAGTTTAA-------GCTATAT--TTTTTAA--------------------------------------TTTTT---ACAATATCCATTTACAGCTTTTTAGACGCCTAAGCTCTGAGGGATTGACGGATCTCATTGAGATGCASizeHit CountTotal NormTotal
No Reads
droBia1
GGA----------------------------ACAGTGCCGCAGTTTGAGGAGATGGGGCAGACCCTGAGGAATGTAAGTAGAT----------------ATTCTTTT-C-------------TT-------------------TTGAAATTCTGT---------------------ATA--CT-TATGCATTTATTTGCAGCTCTTTAGGCGACTGAGCTCTGAGGGATTAACGGATCTAATTGAAATGCASizeHit CountTotal NormTotal
No Reads
droTak1
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCTGTTTAGACGCCTAATCTCTGAGGGTTTGACAAATCTAAATGAGATGCASizeHit CountTotal NormTotal
No Reads
droEug1
GGA----------------------------GCTACGCCACAGTACGAAGAGATGGGACAAACTCTGAGGAATGTGAGTAGAT----------------TTGGTTGT-TTTTTA-----------ATATGAATTT-----------------TGT---------------------TTA--ATTTTGCCATTCACTTACAGCTTTTCAGGCGCCTAAGCTCTGAGGGATTAACGGATCTTATTGAAATGCASizeHit CountTotal NormTotal
No Reads
dm3
CG---------------------------------------------AGGAGATGGGACAGACCTTGCGTAATGTATGTGGAT----------------TAGATCAA-A-------------ATTGTATAAATTGTAA--------------------------------------ATT-----GTTCCTTTAACGTGCAGCTCTTTAGACGCTTAAGCTCTGAGGGATTAACGGATCTAATTGAGATGCASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
................................................................................................................................................................................................................................GGGATTAACGGATCTAATTGAGATGC.2615.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GATTAACGGATCTAATTGAGATGCA2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AGGAGATGGGACAGACCTTGCGT.....................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................................................................................................AA--------------------------------------ATT-----GTTCCTTTAACGTGCAG..................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................GACGCTTAAGCTCTGAGGT........................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................GATGGGACAGACCTTGCGTA....................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................AACGGATCTAATTGAGATG..1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................................................................................................................................................................................................................GACGCTTAAGCTCTGAGGGATTAACGG................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CG---------------------------------------------AGGAGATGGGACAGACTCTGCGTAATGTAAGTGGAT----------------TAGATCAA-A-------------ATTGTATAAATGGTAAATTGTTGGTA----------------------------------------ATTTAACTTGCAGCTCTTTAGACGCCTAAGCTCTGAGGGTTTAACGGATCTCATTGAGATGCASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
No Reads
droSec2
CG---------------------------------------------AGGAGATGGGACAGACCCTGCGTAATGTAAGTGGAT----------------TGGATCAA-A-------------ATTGTATAAATGGTAA--------------------------------------ATT-----GTTCCCTTAACTTGCAGCTCTTTAGACGCCTAAGCTCTGAGGGTTTAACGGATCTCATTGAGATGCASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
................................................................................................................................................................................................................GACGCCTAAGCTCTGAGGGTTTAACGG................2711.0010010
droYak3
GGA----------------------------ACTCTGCCGCAGTACGAGGAGATGGGACAGACCCTGCGGAATGTAAGTGTAACTTT---------AATGTAATTAA-A-------------GTCATATGAATTGTAA--------------------------------------TTT-----ATTCCCTCAACTTGAAGCTTTTTAGACGCCTAAGCTCTGAGGGCCTAACGGATCTCATTGAGATGCASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..........................................GTACGAGGAGATGGGACAGACCCTGCGGA....................................................................................................................................................................................2911.00100000010000
droEre2
GGA----------------------------ACTCTGCCGCAGTACGAGGAGATGGGACAGACCCTGCGCAATGTAAGCGGAT----------------TAAACTAG-A-------------GCTATATGCCCTCTAA--------------------------------------TTT-----GTACCCTTAACTTGCAGCTTTTTAGACGCCTTAGCTCCGAGGGCTTAACGGATCTCATTGAGATGCASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
No Reads

Generated: 10/20/2015 at 07:16 PM