ID:

dvi_16379

 Coordinate:

scaffold_13047:10575944-10576094 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.2 -30.2 -30.2

Flybase annnotation

exon [dvir_GLEANR_8395:4]; CDS [Dvir\GJ23037-cds]; intron [Dvir\GJ23037-in]

Repeatable elements

NameClassFamilyStrand
DMR_DVUnknownUnknown+
mature
  1. scaffold_412:214-234 -
  2. scaffold_9386:541-561 +
  3. scaffold_9580:647-667 +
  4. scaffold_12932:549280-549300 +
  5. scaffold_12932:550081-550101 +
  6. scaffold_13047:6629065-6629085 +
  7. dvi_16379  scaffold_13047:10576016-10576036 -
  8. scaffold_13047:10650002-10650022 -
  9. scaffold_13047:14713045-14713065 +
  10. scaffold_13047:18293815-18293835 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AACTCCGCGCGGAGATATGAAGTTCCAAAACGACATAACTCCGCGCGGAGGTATGACGTTCCAAGACGACATAACTCCACGGGTAATAGTTCCGCGCGGAGATAAAAAATCGAGGTCGGTCCGAAAATCGAAACTTTTTCGATGATTTTTTTTATTATATCTGGTAAATATTGTCTGATTTAAAAATGTTATACCTTTTTGAATGCGTACGGACCTCTACCATCAATTGACATTCATGCAAATTAAACATC
**************************************************((((((((((...((((((.....((((.((((........)).)).))))..........(((((((...((((((........)))))).))))))).(((((((....)))))))..))))))........)))))))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060688
160_ovaries_total
 M047
female body
 SRR060673
9_ovaries_total
 V053
head
 M027
male body		 SRR060655
9x160_testes_total
 SRR060681
Argx9_testes_total
 V116
male body
............................................................................................................................................................................................TTATACCTTTTTGAATGCGTACGGACC.................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................TTATACCTTTTTGAATGCGTACGGAC..................................... 26 0 3 0.33 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................................TTATACCTTTTTGAATGCGTACGG....................................... 24 0 20 0.30 6 6 0 0 0 0 0 0 0
.......................................................................................................................................................TAATTATATCTGGTAAACAT................................................................................ 20 2 4 0.25 1 0 0 0 1 0 0 0 0
............................................................................................................ATCGAGGTCGGTCCGAAAATC.......................................................................................................................... 21 0 10 0.20 2 0 0 0 0 2 0 0 0
............................................................................................................................................................................................TTATACCTTTTTGAATGCGTACGGTC..................................... 26 1 5 0.20 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................TTATGCCTTTTTGAATGCGTACGGAC..................................... 26 1 11 0.09 1 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................CTTTTTGAATGCGTACGG....................................... 18 0 20 0.05 1 0 1 0 0 0 0 0 0
........................................................CGTTCCAAGACGAGATAACTC.............................................................................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0 0 0 0
..............ATATGAAGTTCCAAAACGACA........................................................................................................................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0 0 0 0
........................................CCGCGCGGAGGTGTGACGTTCC............................................................................................................................................................................................. 22 1 20 0.05 1 0 1 0 0 0 0 0 0
..............................CGACATAACTCCGCGCGGAGG........................................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 0 1 0
...................................................................GACATATCTCCAAGGGTGA..................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1
........................................................................................................................................................................................AATGTTATACCTTTTTGAATGCGT........................................... 24 0 20 0.05 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

TTGAGGCGCGCCTCTATACTTCAAGGTTTTGCTGTATTGAGGCGCGCCTCCATACTGCAAGGTTCTGCTGTATTGAGGTGCCCATTATCAAGGCGCGCCTCTATTTTTTAGCTCCAGCCAGGCTTTTAGCTTTGAAAAAGCTACTAAAAAAAATAATATAGACCATTTATAACAGACTAAATTTTTACAATATGGAAAAACTTACGCATGCCTGGAGATGGTAGTTAACTGTAAGTACGTTTAATTTGTAG
**************************************************((((((((((...((((((.....((((.((((........)).)).))))..........(((((((...((((((........)))))).))))))).(((((((....)))))))..))))))........)))))))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060670
9_testes_total
 SRR060681
Argx9_testes_total
 SRR060678
9x140_testes_total
 SRR060679
140x9_testes_total
 GSM1528803
follicle cells		 SRR060680
 9xArg_testes_total
 SRR060655
9x160_testes_total
 SRR060675
140x9_ovaries_total
 M047
female body
 SRR060658
140_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060677
Argx9_ovaries_total
 SRR060688
160_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
 SRR060668
160x9_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
..............................................................................................................................................................................................................CATGCCTGGAGATGGTAGTTAACTGT................... 26 0 2 1.50 3 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTGAGGTGGCCATTATGAAGGCT............................................................................................................................................................ 23 3 2 1.50 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ATGCCTGGAGATGGTAGTTAACTGT................... 25 0 2 1.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGAGATGGTAGTTAACTGTAAGT............... 23 0 2 1.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CCTGGAGATGGTAGTTAACTGT................... 22 0 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ATGCCTGGAGATGGTAGTTAACT..................... 23 0 2 1.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGCCTGGAGATGGTAGTTAACT..................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GCATGCCTGGAGATGGTAGTTAAC...................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCCTGGAGATGGTAGTTAACTGTAAGT............... 27 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GTAATGCCTGGAGATGGTAGTTAACT..................... 26 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CGCATGCCTGGAGATGGTAGTTAACT..................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTGGAGATGGTAGTTAACTGT................... 21 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ATGGAAAAACTTACGCATGCCTGGAGA................................. 27 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGAGATTGTAGTTAACTGTAAGT............... 23 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACGCATGCCTGGAGATGGTAGTTAAC...................... 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TCCTGGAGATGGTAGTTAACTGT................... 23 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GCATGCCTGGAGATGGTAGTTAACT..................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CCCTGGAGATGGTAGTTAACTGT................... 23 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCCTGGAGATGGTAGTTAACTGT................... 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CCTGGAGATGGTAGTTAACTGTAA................. 24 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTGGAGATGGTAGTTAACTGTAAGTA.............. 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CATGCCTGGAGATGGTAGTTAACT..................... 24 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CATGCCTGGAGATGGTAGTTAACTGTA.................. 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................TGTATGTAGGTGGCCATTAT................................................................................................................................................................... 20 3 9 0.22 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ACAGACTAAATTTTTACAATATGGAAA..................................................... 27 0 18 0.17 3 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0
...........................................................................................................................................................................................CAATATGGAAAAACTTACGCATGCCT...................................... 26 0 20 0.15 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0
...................................ATTGAGGCGCGCCTCCATACT................................................................................................................................................................................................... 21 0 20 0.15 3 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0
............................................CGCCTCCATACTGCAAGGTTC.......................................................................................................................................................................................... 21 0 15 0.13 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TGAGGCGCGCCTCCATACTGC................................................................................................................................................................................................. 21 0 20 0.10 2 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................ACTAAATTTTTACAATATGGAAAAACT................................................. 27 0 15 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................ATTGAGGCGCGCCTCCATTCT................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ACAATATGGAAAAACTTACGCATGCCT...................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................ATTGAGGCGCGCCTCCATACTG.................................................................................................................................................................................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................TATTGAGGCGCGCCTCCATAC.................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......GCGCCTCTATACTTCAAGGTT............................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TTGAGGCGCGCCTCCATACTG.................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................AGGCGCGCCTCCATACTGCAA............................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GTATTGAGGCGCGCCTCCAT...................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................CGCGCCTCCATACTGCAAGGT............................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...AGGCGCGCCTCTATACTTCAA................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................TCAAGGTTTTGCTGTATTGAGG................................................................................................................................................................................................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................TGCAAGGTTCTGCTGTATTGA............................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................GTTGAGGCGCGCCTCCATACT................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...............................CTGTATTGAGGCGCGCCTCCAT...................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................CCATTATCAAGGCGCGCCTCT..................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:10575894-10576144 - dvi_16379 AACT-------------CCGCGC-----------GGAGATATGAAGTTCCA----------------AAACGACATAA-------------------------------------------------------------CTCCGCGCGGAGGTATGACGTT---------------------------------------------------------------------------------------------------------------------------------------CCAAGA-------------------------------------CGACATAACTCCACGGGTAA-TAGTTCCGCGCGGAGATAAAAAATCGAGGTCGGTCCG-------------------------AAAATCGAAACTTTTTCGATGATTTTTTTT-----------------------A---TTATAT---CTGGTAAA---TATTG--------------------------TCTGATTTAAAAATGTTATACCTTTTTGAATGCGTACGGACCTCTACCATCAATTGACATTCATGC----------------------AA-ATTAA--ACA---------------------------------------------------------------------------------------TC
droMoj3 scaffold_6540:25974748-25974903 + GCGG-------------GCAAAC-----------AAGATTAATAGGTGTTAAAATGTCTAGAG----------------------------------------------------------------------------------------TTT----TTTTTTTTTTAGTGCTTTGT---------------CT---------AGAAATGCTTA-----------------------CCTTATATAAAAAAGTT-----------------ATAGATCTAGAAATGTATATTTGAATATAA-------------------------------------CGAAACAATCCATTT-----ACTATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-TTTAA--ATA---------------------------------------------------------------------------------------TA
droGri2 scaffold_14624:1404621-1404727 - AACT-------------TTTTAT-----------AAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTT-----------------------A---TTAAAT---CTA---GAAAATATTTCCAAAAATAAAAAAATGCAAATTCTTTCGAATTCTAAGGATT---TCAC-----------------------------ATGC------ATATA---------------------TT-AGTAA--TTA---------------------------------------------------------------------------------------TA
droWil2 scf2_1100000004952:688084-688231 + ATCA-------------TCGCCGGTGATCTGTGCGGAGATATGTCGTTTCA----------------AAA------------------------------------CGTCATATCTCCGCCGTTAGAAAAACGACATATCTCCGCGCGAAATTATGTCGTT---------------------------------------------------------------------------------------------------------------------------------------TCAGAA-------------------------------------CGACATATCTCCGCG----------------CGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTGTTGGGGTTTATTA-TT----ATA---------------------------------------------------------------------------------------TC
dp5 Unknown_group_95:17716-17908 + GCGG--------------------------------AGATATGTCGTTTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGCGGAGATATGTCGTTCCGAAA-------------------------------------CGACTTAAGTCCGCC----------------AGAA-------------------------AATAATTAACTAATTTCGAATGTAAAA-------------------TACACTTATATTTTTTTGACAGCATTTCCTT---TTATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAAA-TTAAAAAAT---------------------------------------------------------------------------------------GT
droPer2 scaffold_125:76677-76776 + ATCT-------------CCGCGC-----------GAAATGATGTCGTTTTA----------------AAGCGACATAC-------------------------------------------------------------CTCCGCGCGGAGATATGACGAT---------------------------------------------------------------------------------------------------------------------------------------ATGAAA-------------------------------------CGACATAACTCCGCC-----GTGTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-AGCGG--AGA---------------------------------------------------------------------------------------TA
droAna3 scaffold_13337:22932304-22932420 - TTTT-------------TTTGTA-----------AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTT-----------------------A---AATTAT---TCTTTTTT---CATTT--------------------------TCCCTTTTTTAAATGTTATATTTTTTTTTAAAGATACGATTATCTATGATAATTTTGTAATAATAG----------------------CA-ATAAA--TAA---------------------------------------------------------------------------------------TA
droBip1 scf7180000396575:284280-284331 + ATAT-------------TTTTTA-----------AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT---CTTGCAAA---TGATT--------------------------TCTAATTTAA---------------------------------------TTAATTG--------------------------------------------------------------------------------------------------------------------------------TTTCAC
droKik1 scf7180000302011:176-347 - ATCT-------------CCGCCG-----------AACTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACGATAAC-----TTTTACAAAAAT----------------------------------------------------AAATATCCTGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------TTA-----------------------A---TTATGC---ACA------------------------------------------------------------------------------------------------------------------------AAAATGAAAG-TCAAAATTGTGAAAATAAACTTGTTGTCGTTTGACCATATCAATGTTGACTAATAAAATGTTGGCATACTACCATTTTCATTGCTTTCGATGCTCTAC
droFic1 scf7180000453932:682289-682396 - TTCG-------------AAAATC-----------AAAAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTTTATTCAATTTG-----------------------TTTTTAACTG---TTA---GAAAATCTTTTTTCTGATAATGAT-----------------------------ATAATGATTTAAAAAC------ACTCCATTTAACAACTG------------------------------------------AC----------------------------------------------------------------------------------------AT
droEle1 scf7180000491238:1247457-1247614 + AAAAAATTGCTTTCAACGGAAAC-CAAAAA------------------------TGTTGAAGATTTTAGGTGG----------------------------------------------------------------------------------------------------T----TCGTTTGATAACATC--------------------TTAATGGG-----------------------------------------------------------------------------------------------------TTTTATACAGTTAGAATTAAAATAAAATCGCA----------------------------------------------------------------------------------------TT-----------TTTTTTTGTTATTGTACACAT---ATTTAAGTGTATA--------TT----------------------------------------------------------------------------------------------------------------TTTGAA-GTTAA--ACA---------------------------------------------------------------------------------------CA
droRho1 scf7180000778193:39360-39519 + ACTC-------------TA-CGAGTAACGGG---------------TATAAAAATGCCAAAA-------------------------------------------------------------------TCCGAAAGA------TCCGGAAAAATCAACTTTTATTGCGGTTTTTTGA---------------TCAAAACCATGGGAAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-------------------------------------------------------------------------------------------------G--------------------------TCGCACGATGGAATGCCATACCTCTTTGAATTCGTTACAAAATTTCCAATCGATTGG-----------------------------------------TAT---------------------------------------------------------------------------------------TC
droBia1 scf7180000299101:17624-17796 - ATCT-------------CCGCGC-----------GACATAT-------------------------------------------------------------------------CTCCGCTGAACAAAAAACGACATATCTCCGCGCAGAGATATGACGTT---------------------------------------------------------------------------------------------------------------------------------------TTAACGCGACTTAACTCCGCGCGGAGATATGACGATTTGAAAACGACATTTCTTCGCC----------------------------------------------------------------------------------------GA-----------TTTATTAGAGACTCATCTTAC---ACTTGAATGAATA--------AT-G------------------------------------------------------------------------------------------------------------------TA-TTATG--TAA---------------------------------------------------------------------------------------AA
droTak1 scf7180000415630:180585-180821 - ATCT-------------CCGCGC-----------GGAGATGTGACGTTTAA----------------AAACGAAATATTTTCGCGCGGAGATATGTCGTTTTTAAACGTCACAT-------------------------CTCCGCGCGGAGATAAG--------------------------------------------------------------------------------------------------------------TCGTTTGTAGAAGGGCGGAGCTCTGTCGTTTTAAAA-------------------------------------CGACATATCTCCCCG----------------CGAA---------------------------------------------------------------------------GT--------------------------TTTAAAAG---CTA---CAAAGTTTTTTTTTATATAAACATATGTACATACT----CATTTTAAAATGT---ACAT-----------------------------ATTC------ATATTCGTGC----------------AT-GTTAA--ATC---------------------------------------------------------------------------------------AG
droEug1 scf7180000409105:3319-3435 + AACA-------------TTAATA-----------TTATTTTAATTATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAT-------------ATGA-----------AATAT---AGAGTA-------------------AATATATATATGTATT----ATTTTTCAAGAAT---TCTT-----------------------------TTTT------ATGTATGAAACAAATGAAATGG---AAA-CTTAA--ACA---------------------------------------------------------------------------------------TA
dm3 chrUextra:2657324-2657437 - ATCA-------------TTTATT-----------TTG------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAA-CATTAAAAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------G--------------------------TCTGAATATGGAATGTCATACCTCACTGAGCTCGTAATAACATTTCCAATCAAACTGTGTTC------------------AAAAATGGAAA-TTAA----A---------------------------------------------------------------------------------------TT
droSim2 4:609748-609856 - CCAT-------------GGGCAA-TAAAGAG---------------AATCA---------CAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGTAAGAAAAATCTCCAATT------------------------GTCTTTCATTA-----------------------------------------------AAA---TAATT--------------------------TTTGATTTTAAGGTTTCATGCTTTTTTGAAT-------------------------------------------------------------------GCG---------------------------------------------------------------------------------------TA
droSec2 scaffold_73:23310-23357 - TTTT-------------TATAA----------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTA-----------------------A---TTATAT---ATAATA------------------------------------------------------------------------------------------------------------------------AATATAT-TTAAAGCTA---------------------------------------------------------------------------------------TT
droYak3 2R:1313669-1313762 - ACCT-------------CCGCTC-----------GGAGCTATGACATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAACGACAAAGCTCCGTCAGGAAAAAG-------------------------------------CGACATAATTCCGTCCGAAAAGTATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-GGCGG--AGA---------------------------------------------------------------------------------------TA
droEre2 scaffold_4929:23993914-23994037 + AGTT-------------CCGCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAGTTTGGCGGAGCC--------------------AAAGCGTTTTTAAAGCGACATAACTCCGCAAATAAAAAAAGGACGGAGATATGTCGAGCTTAGTTCGCCGAAGATATGTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------------------------------------------------------------------------AT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AACT-------------CCGCGC-----------GGAGATATGAAGTTCCA----------------AAACGACATAA-------------------------------------------------------------CTCCGCGCGGAGGTATGACGTT---------------------------------------------------------------------------------------------------------------------------------------CCAAGA-------------------------------------CGACATAACTCCACGGGTAA-TAGTTCCGCGCGGAGATAAAAAATCGAGGTCGGTCCG-------------------------AAAATCGAAACTTTTTCGATGATTTTTTTT-----------------------A---TTATAT---CTGGTAAA---TATTG--------------------------TCTGATTTAAAAATGTTATACCTTTTTGAATGCGTACGGACCTCTACCATCAATTGACATTCATGC----------------------AA-ATTAA--ACA---------------------------------------------------------------------------------------TCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATACCTTTTTGAATGCGTACGGACC....................................................................................................................................................2730.331000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATACCTTTTTGAATGCGTACGGAC.....................................................................................................................................................2630.331000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATACCTTTTTGAATGCGTACGG.......................................................................................................................................................24200.306000000000000000000000000000000000000006000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATCGAGGTCGGTCCG-------------------------AAAATC....................................................................................................................................................................................................................................................................................................21100.202200000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTGAATGCGTACGG.......................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
......................................ATATGAAGTTCCA----------------AAACGACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................CGACATAA-------------------------------------------------------------CTCCGCGCGGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTTATACCTTTTTGAATGCGT...........................................................................................................................................................24200.051000000000000000000000001000000000000000000000000000000000000000
droMoj3
GCGG-------------GCAAAC-----------AAGATTAATAGGTGTTAAAATGTCTAGAG----------------------------------------------------------------------------------------TTT----TTTTTTTTTTAGTGCTTTGT---------------CT---------AGAAATGCTTA-----------------------CCTTATATAAAAAAGTT-----------------ATAGATCTAGAAATGTATATTTGAATATAA-------------------------------------CGAAACAATCCATTT-----ACTATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-TTTAA--ATA---------------------------------------------------------------------------------------TASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AACT-------------TTTTAT-----------AAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTT-----------------------A---TTAAAT---CTA---GAAAATATTTCCAAAAATAAAAAAATGCAAATTCTTTCGAATTCTAAGGATT---TCAC-----------------------------ATGC------ATATA---------------------TT-AGTAA--TTA---------------------------------------------------------------------------------------TASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ATCA-------------TCGCCGGTGATCTGTGCGGAGATATGTCGTTTCA----------------AAA------------------------------------CGTCATATCTCCGCCGTTAGAAAAACGACATATCTCCGCGCGAAATTATGTCGTT---------------------------------------------------------------------------------------------------------------------------------------TCAGAA-------------------------------------CGACATATCTCCGCG----------------CGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTGTTGGGGTTTATTA-TT----ATA---------------------------------------------------------------------------------------TCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................TCTGTGCGGAGATATGTCGTTTCA----------------AAA------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.25101000
...............................TGCGGAGATATGTCGTTTCA----------------AAA------------------------------------CG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25101000
................................................................................................................................................................................................................................................................................................................................................................CG----------------CGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTGTTGGGGTTTA......................................................................................................2370.14101000
..............................................................................................................................................................................................................................................................................................................................................................CGCG----------------CGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTGTTGGGGTTT.......................................................................................................2470.14100010
...........................................................................................................................TAGAAAAACGACATATCTCCGCGCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26180.11202000
........................................................................................................................................................................................................................................................................................................TCAGAA-------------------------------------CGACATATCTCCGCG----------------CGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.......................................................................................................................25130.08101000
...........................................................................................................................TAGAAAAACGACATATCTCCGCGCGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28170.06100010
................................................................................................................................AAACGACATATCTCCGCGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
................................................................................................................................AAACGACATATCTCCGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
......................................................................................................................GCCGTTAGAAAAACGACATATCTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
...............................................................................................................TATCTCCGCCGTTAGAAAAACGACATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.................................................................................................................TCTCCGCCGTTAGAAAAACGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110000
..............................................................................................................................................CGCGCGAAATTATGTCGTT---------------------------------------------------------------------------------------------------------------------------------------TCAGAA-------------------------------------CG...........................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
...........................................................................................................................................................................................................................................................................................................GAA-------------------------------------CGACATATCTCCGCG----------------CG............................................................................................................................................................................................................................................................................................................................................................20200.05100001
...............................................................................................................................................GCGCGAAATTATGTCGTT---------------------------------------------------------------------------------------------------------------------------------------TCAGAA-------------------------------------CGAC.........................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
dp5
GCGG--------------------------------AGATATGTCGTTTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGCGGAGATATGTCGTTCCGAAA-------------------------------------CGACTTAAGTCCGCC----------------AGAA-------------------------AATAATTAACTAATTTCGAATGTAAAA-------------------TACACTTATATTTTTTTGACAGCATTTCCTT---TTATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAAA-TTAAAAAAT---------------------------------------------------------------------------------------GTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAAA-TTA...............................................................................................2539.672902310101300
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAAA-TTAA..............................................................................................2634.001201000000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTTTTGACAGCATTTCCTT---.................................................................................................................................................................................................................................................2333.331001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAAA-TTAAA.............................................................................................2733.33100400000150
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAAA-TT................................................................................................2432.6780800000000
................................................TCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2442.0080800000000
.............................................................................................................................................CCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................21142.002802600002000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAAA-T.................................................................................................2332.0060600000000
................................................................................................................................................CGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................21131.08140400001900
............................................................................................................................................TCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................21141.001401200001100
.....................................................................................................................................................................................................................................................................................................................................................................................................................TAACTAATTTCGAATGTAAAA-------------------TACACC.............................................................................................................................................................................................................................................................................2711.0010010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTGACAGCATTTCCTT---.................................................................................................................................................................................................................................................2131.0030300000000
...............................................TTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2241.0040400000000
............................................................................................................................................TCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.8660600000000
...............................................................................................................................................................................................................................................................................TGTGACACGGCGGAGATATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2080.7560500100000
..............................................TTTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.7530000000300
...................................................................AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.7530300000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTTTTGACAGCATTTCCT.....................................................................................................................................................................................................................................................2230.6720200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTTTTGACAGCATTTCCTT---TTA..............................................................................................................................................................................................................................................2630.6720100100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTTTTGACAGCATTTCC......................................................................................................................................................................................................................................................2130.6720200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTTTTGACAGCATTTCCTT---T................................................................................................................................................................................................................................................2430.6720200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGACAGCATTTCCTT---TTA..............................................................................................................................................................................................................................................2230.6720200000000
........................................................................................................................................................TATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGCGGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.5740310000000
............................................................................................................................................TCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.5740400000000
.................................................................................................................................................GCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.5470400000210
...............................................................................................................................................................................................................................................................................TGTGACACGGCGGAGATATGTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2480.5040400000000
................................................TCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.5020200000000
.................................................CA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.5020200000000
...............................................TTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.5020200000000
........................................................................................................................................................TATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.5040400000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTTTTGACAGCATTTC.......................................................................................................................................................................................................................................................2040.5020200000000
...........................................................................................................................................CTCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.5080700000100
............................................................................................................................................TCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.4440400000000
...................................................................................................................................................GGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................18140.4360000000330
............................................................................................................................................TCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2970.4330300000000
................................................................................................................................................CGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.3830200100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTGACAGCATTTCCTT---TTA..............................................................................................................................................................................................................................................2430.3310100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAGCATTTCCTT---TTATAACATAATT--------............................................................................................................................................................................................................................2830.3310100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTTTTTTGACAGCATTTCCT.....................................................................................................................................................................................................................................................2430.3310010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTTGACAGCATTTCCTT---TTA..............................................................................................................................................................................................................................................2530.3310100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTGACAGCATTTCCT.....................................................................................................................................................................................................................................................2030.3310100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAGCATTTCCTT---TTATAACATAA......................................................................................................................................................................................................................................2630.3310100000000
........................................................................................................................................................TATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.3330300000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAA....................................................................................................2130.3310100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTGACAGCATTTCCTA---.................................................................................................................................................................................................................................................2130.3310100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGACAGCATTTCCTT---TTATAACA.........................................................................................................................................................................................................................................2530.3310100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAAA-TTAA..............................................................................................2530.3310100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGACAGCATTTCCTT---TTATAACA.........................................................................................................................................................................................................................................2830.3310100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAAA-TTAAA.............................................................................................2630.3310100000000
.....................................................................................................................................................AGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.3330000000300
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAAA-TTAAAA............................................................................................2830.3310100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACATAATT--------TT----------------------------------------------------------------------------------------------------------------ATTGAAA-TT................................................................................................2330.3310100000000
...........................................................................................................................................CTCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.3150500000000
..........................................................................................................................................................TG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGCGGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.2920200000000
...........................................................................................................................................CTCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.2940300000100
............................................................................................................................................TCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.2940310000000
.................................................CA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
..............................................TTTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510100000000
................................................TCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
................................................TCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGGAGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.2510100000000
...........................................................................................................................................................................................................................................................................................................AAA-------------------------------------CGACTTAAGTCCGCC----------------AGA...........................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
............................................................................................................................................................................................................................................................................................................................................................TCCGCC----------------AGAA-------------------------AATAATTAACTAATT..................................................................................................................................................................................................................................................................................................................2540.2510100000000
................................................TCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510010000000
........................................................................................................................................................................................................................................................................................................................................................TAAGTCCGCC----------------AGAA-------------------------AATAATTAACTAATT..................................................................................................................................................................................................................................................................................................................2940.2510010000000
................................................TCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510100000000
....................................................................AA------------------------------------CGTCATAT-------------------------CTCCGCGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000100000
............................................................................................................................................................................................................................................................................................................AA-------------------------------------CGACTTAAGTCCGCC----------------AGA...........................................................................................................................................................................................................................................................................................................................................................2040.2510100000000
.................................................CA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510010000000
...............................................TTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.2510100000000
...............................................TTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510100000000
................................................TCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.2510100000000
..............................................TTTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510100000000
...............................................TTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
...............................................................................................................................................................................................................................................................................TGTGACACGGCGGAGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................1880.2520200000000
................................................TCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGGAGATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2940.2510100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTTTTTGACAGCATTTC.......................................................................................................................................................................................................................................................2140.2510000000100
.................................................................................................................T-------------------------CTCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510100000000
.................................................CA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
.................................................................................................................................................................................................................................................................................TGACACGGCGGAGATATGTCGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2380.2520200000000
................................................TCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGACAGCATTTCCTT---.................................................................................................................................................................................................................................................1840.2510100000000
.............................................................................................................................................................................................................................................................................TTTGTGACACGGCGGAGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2080.2520200000000
................................................TCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510100000000
...............................................................................................................................................................................................................................................................................TGTGACACGGCGGAGATATGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2280.2520200000000
................................................................................................................................................CGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.2520100000100
.................................................CA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510100000000
.............................................................................................................................................................................................................................................................................................................A-------------------------------------CGACTTAAGTCCGCC----------------AGAA-------------------------AATAAT...........................................................................................................................................................................................................................................................................................................................2640.2510100000000
...............................................................................................................................................................................................................................................................................TGTGACACGGCGGAGATATGTCGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2580.2520200000000
.....................................................................A------------------------------------CGTCATAT-------------------------CTCCGCGCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510100000000
.............................................................................................................................................................................................................................................................................TTTGTGACACGGCGGAGATATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2280.2520200000000
.................................................................................................................T-------------------------CTCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
....................................................................AA------------------------------------CGTCATAT-------------------------CTCCGCGCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
...............................................TTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510100000000
............................................CGTTTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510100000000
.......................................................................................................................................................ATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.2220100000100
...........................................................................................................................................CTCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.2130300000000
..........................................................................................................CGTCATAT-------------------------CTCCGCGCGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.2010100000000
................................................................................................................................................CGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.1630100000200
.............................................................................................................................................CCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.1420100000100
................................................................................................................................................CGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.1410100000000
............................................................................................................................................................................................................................................................................GTTTGTGACACGGCGGAGATATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2370.1410100000000
.............................................................................................................................................CCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.1420200000000
............................................................................................................................................TCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.1420200000000
........................................................................................................................................................TATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGCGGAGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410100000000
.............................................................................................................................................CCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.1410100000000
.............................................................................................................................................CCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410100000000
........................................................................................................................................................TATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGCGGAGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2770.1410000100000
...............................................................................................................................................................................................................................................................................TGTGACACGGCGGAGATATGTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................2580.1310100000000
...............................................................................................................................................................................................................................................................................TGTGACACGGCGGAGATATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1310100000000
..................................................................................................................................................CGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310000000100
................................................................................................................................................CGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310100000000
.............................................................................................................................................................................................................................................................................TTTGTGACACGGCGGAGATATGTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2680.1310100000000
..............................................................................................................................................................................................................................................................................TTGTGACACGGCGGAGATATGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310000001000
...........................................................................................................................................................................................................................................................................CGTTTGTGACACGGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.1311000000000
..............................................................................................................................................CGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.1310100000000
...............................................................................................................................................................................................................................................................................TGTGACACGGCGGAGATATGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2380.1310100000000
......................................................................................................................................................GATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310100000000
.......................................................................................................................................................ATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.1310000000100
...................................................................................................................................................GGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310100000000
..............................................................................................................................................................................................................................................................................TTGTGACACGGCGGAGATATGTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2580.1310100000000
..............................................................................................................................................................................................................................................................................TTGTGACACGGCGGAGATATGTCGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2680.1310100000000
..........................................................................................................................................................TG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310100000000
..........................................................................................................................................................TG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1310100000000
................................................................................................................................................CGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.1310100000000
..................................................................................................................................................CGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310100000000
..............................................................................................................................................................................................................................................................................TTGTGACACGGCGGAGATATGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2380.1310100000000
.................................................................................................................................................................................................................................................................................TGACACGGCGGAGATATGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1310010000000
.................................................................................................................................................................................................................................................................................TGACACGGCGGAGATATGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310100000000
.................................................................................................................................................GCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.1310100000000
........................................................................................................................................................TATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGACACGGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310100000000
...................................................................AAA------------------------------------CGTCATAT-------------------------CTCCGCGCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310100000000
.................................................................................................................................................................................................................................................................................TGACACGGCGGAGATATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................1980.1310100000000
..............................................................................................................................................................................................................................................................................TTGTGACACGGCGGAGATATGTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310100000000
...........................................................................................................................................CTCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.1110100000000
.............................................................................................................................................CCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.1110100000000
............................................................................................................................................TCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.1110100000000
..............................................................................................................................................CGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.1120200000000
...............................................................................................................................................GCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................19190.1120200000000
...............................................................................................................................................GCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.1120200000000
.........................................TGTCGTTTCA----------------AAA------------------------------------CGTCATAT-------------------------CTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26100.1010100000000
.................................................................................................................................................................................................................................................................................TGACACGGCGGAGATATGTCGTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................24100.1010100000000
............................................CGTTTCA----------------AAA------------------------------------CGTCATAT-------------------------CTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.1010100000000
.........................................TGTCGTTTCA----------------AAA------------------------------------CGTCATAT-------------------------CTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.1010100000000
GCGG--------------------------------AGATATGTCGTTTCA----------------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.0910100000000
.........................................TGTCGTTTCA----------------AAA------------------------------------CGTCATAT-------------------------CT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.0910100000000
........................................ATGTCGTTTCA----------------AAA------------------------------------CGTCATAT-------------------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.0910100000000
.............................................................................................................................................CCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................23140.0710100000000
............................................................................................................................................TCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.0710100000000
.............................................................................................................................................CCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................19160.0610000000100
...........................................................................................................................................CTCCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.0610100000000
.............................................................................................................................................CCGCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................18160.0610000000100
...............................................................................................................................................GCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................22190.0511000000000
................................................................................................................................................CGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................18190.0510100000000
...............................................................................................................................................GCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.0510100000000
.............................................................................................................CATAT-------------------------CTCCGCGCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.0510000000010
...............................................................................................................................................GCGCGGAGATATG--------------------------------------------------------------------------------------------------------------TCGTTTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
droPer2
ATCT-------------CCGCGC-----------GAAATGATGTCGTTTTA----------------AAGCGACATAC-------------------------------------------------------------CTCCGCGCGGAGATATGACGAT---------------------------------------------------------------------------------------------------------------------------------------ATGAAA-------------------------------------CGACATAACTCCGCC-----GTGTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-AGCGG--AGA---------------------------------------------------------------------------------------TASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................ATAACTCCGCC-----GTGTCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C.....................................................................................................1912.002200000
..........................................................................................................................................................................................................................................................................................................GAAA-------------------------------------CGACATAACTCCGCC-----.........................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droAna3
TTTT-------------TTTGTA-----------AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTT-----------------------A---AATTAT---TCTTTTTT---CATTT--------------------------TCCCTTTTTTAAATGTTATATTTTTTTTTAAAGATACGATTATCTATGATAATTTTGTAATAATAG----------------------CA-ATAAA--TAA---------------------------------------------------------------------------------------TASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATAT-------------TTTTTA-----------AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT---CTTGCAAA---TGATT--------------------------TCTAATTTAA---------------------------------------TTAATTG--------------------------------------------------------------------------------------------------------------------------------TTTCACSizeHit CountTotal NormTotal
No Reads
droKik1
ATCT-------------CCGCCG-----------AACTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACGATAAC-----TTTTACAAAAAT----------------------------------------------------AAATATCCTGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------TTA-----------------------A---TTATGC---ACA------------------------------------------------------------------------------------------------------------------------AAAATGAAAG-TCAAAATTGTGAAAATAAACTTGTTGTCGTTTGACCATATCAATGTTGACTAATAAAATGTTGGCATACTACCATTTTCATTGCTTTCGATGCTCTACSizeHit CountTotal NormTotal
No Reads
droFic1
TTCG-------------AAAATC-----------AAAAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTTTATTCAATTTG-----------------------TTTTTAACTG---TTA---GAAAATCTTTTTTCTGATAATGAT-----------------------------ATAATGATTTAAAAAC------ACTCCATTTAACAACTG------------------------------------------AC----------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotal
No Reads
droEle1
AAAAAATTGCTTTCAACGGAAAC-CAAAAA------------------------TGTTGAAGATTTTAGGTGG----------------------------------------------------------------------------------------------------T----TCGTTTGATAACATC--------------------TTAATGGG-----------------------------------------------------------------------------------------------------TTTTATACAGTTAGAATTAAAATAAAATCGCA----------------------------------------------------------------------------------------TT-----------TTTTTTTGTTATTGTACACAT---ATTTAAGTGTATA--------TT----------------------------------------------------------------------------------------------------------------TTTGAA-GTTAA--ACA---------------------------------------------------------------------------------------CASizeHit CountTotal NormTotal
No Reads
droRho1
ACTC-------------TA-CGAGTAACGGG---------------TATAAAAATGCCAAAA-------------------------------------------------------------------TCCGAAAGA------TCCGGAAAAATCAACTTTTATTGCGGTTTTTTGA---------------TCAAAACCATGGGAAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-------------------------------------------------------------------------------------------------G--------------------------TCGCACGATGGAATGCCATACCTCTTTGAATTCGTTACAAAATTTCCAATCGATTGG-----------------------------------------TAT---------------------------------------------------------------------------------------TCSizeHit CountTotal NormTotal
No Reads
droBia1
ATCT-------------CCGCGC-----------GACATAT-------------------------------------------------------------------------CTCCGCTGAACAAAAAACGACATATCTCCGCGCAGAGATATGACGTT---------------------------------------------------------------------------------------------------------------------------------------TTAACGCGACTTAACTCCGCGCGGAGATATGACGATTTGAAAACGACATTTCTTCGCC----------------------------------------------------------------------------------------GA-----------TTTATTAGAGACTCATCTTAC---ACTTGAATGAATA--------AT-G------------------------------------------------------------------------------------------------------------------TA-TTATG--TAA---------------------------------------------------------------------------------------AASizeHit CountTotal NormTotal
No Reads
droTak1
ATCT-------------CCGCGC-----------GGAGATGTGACGTTTAA----------------AAACGAAATATTTTCGCGCGGAGATATGTCGTTTTTAAACGTCACAT-------------------------CTCCGCGCGGAGATAAG--------------------------------------------------------------------------------------------------------------TCGTTTGTAGAAGGGCGGAGCTCTGTCGTTTTAAAA-------------------------------------CGACATATCTCCCCG----------------CGAA---------------------------------------------------------------------------GT--------------------------TTTAAAAG---CTA---CAAAGTTTTTTTTTATATAAACATATGTACATACT----CATTTTAAAATGT---ACAT-----------------------------ATTC------ATATTCGTGC----------------AT-GTTAA--ATC---------------------------------------------------------------------------------------AGSizeHit CountTotal NormTotal
No Reads
droEug1
AACA-------------TTAATA-----------TTATTTTAATTATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAT-------------ATGA-----------AATAT---AGAGTA-------------------AATATATATATGTATT----ATTTTTCAAGAAT---TCTT-----------------------------TTTT------ATGTATGAAACAAATGAAATGG---AAA-CTTAA--ACA---------------------------------------------------------------------------------------TASizeHit CountTotal NormTotal
No Reads
dm3
ATCA-------------TTTATT-----------TTG------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAA-CATTAAAAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------G--------------------------TCTGAATATGGAATGTCATACCTCACTGAGCTCGTAATAACATTTCCAATCAAACTGTGTTC------------------AAAAATGGAAA-TTAA----A---------------------------------------------------------------------------------------TTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTCACTGAGCTCGTAATAACATT..................................................................................................................................................26120.4250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCTCGTAATAACATTTCC...............................................................................................................................................2190.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTC------------------AAAAATGGAAA-T.................................................................................................19200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................AAAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------G--------------------------TCTGAATATGGAAT................................................................................................................................................................................24200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCACTGAGCTCGTAATAACATT..................................................................................................................................................24120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCTCGTAATAACATTTCCAATC...........................................................................................................................................2590.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATATGGAATGTCATACCTCACT...................................................................................................................................................................25200.2040000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGTCATACCTCACTGAGCTCGT...........................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
..................................TTG------------------------------------------------------------------------------------------------------------------------------------------------------------CCACAA-CATTAAAAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------G--------------------------..............................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTGTTC------------------AAAAATGGAAA-TTAA----A---------------------------------------------------------------------------------------..26200.1530000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCTCGTAATAACATTTCCAAT............................................................................................................................................2490.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCTCGTAATAACATTTCCAATCA..........................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGTGTTC------------------AAAAATGGAAA-TT................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..................................................................................................................................................................................................................AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------G--------------------------TCTGAATATGGAATGTC.............................................................................................................................................................................22200.1020000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAACATTTCCAATCAAACTGTGT..................................................................................................................................26100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATATGGAATGTCATACCTCA.....................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCACTGAGCTCGTAATAACATT..................................................................................................................................................25120.0810000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATACCTCACTGAGCTCGTAATAACA....................................................................................................................................................29120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGAGCTCGTAATAACATT..................................................................................................................................................21130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTCGTAATAACATTTC................................................................................................................................................21130.0810000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATACCTCACTGAGCTCGTAATAAC.....................................................................................................................................................26130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCACTGAGCTCGTAATAACA....................................................................................................................................................22130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCACTGAGCTCGTAATAAC.....................................................................................................................................................21140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAGCTCGTAATAACA....................................................................................................................................................18140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTCGTAATAACATT..................................................................................................................................................19170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCATACCTCACTGAGCTCG............................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACATTTCCAATCAAACTGT....................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................TAAAAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------G--------------------------TCTGAATATGGAA.................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCACTGAGCTCGTAATAG......................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTGTTC------------------AAAAATGGA.....................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTC------------------AAAAATGGAAA-T.................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCTCACTGAGCTCGTAATAT......................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTCCAATCAAACTGTGT..................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CCACAA-CATTAAAAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------G--------------------------TC............................................................................................................................................................................................23200.0510000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTC------------------AAAAATGGAAA-TTA...............................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCAT-------------GGGCAA-TAAAGAG---------------AATCA---------CAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGTAAGAAAAATCTCCAATT------------------------GTCTTTCATTA-----------------------------------------------AAA---TAATT--------------------------TTTGATTTTAAGGTTTCATGCTTTTTTGAAT-------------------------------------------------------------------GCG---------------------------------------------------------------------------------------TASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................TCA---------CAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGTAAGAAAAA..............................................................................................................................................................................................................................................................................................................................2614.00400000021100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGTTTCATGCTTTTTTGAAT-------------------------------------------------------------------GCG---------------------------------------------------------------------------------------TA2813.00300000001020000000
.................................................................TTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGTAAGAAAAATCTCCAAT......................................................................................................................................................................................................................................................................................................................2612.00200000000110000000
.................................................CA---------CAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGTAAGAAAAATC............................................................................................................................................................................................................................................................................................................................2712.00200000000200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------GTCTTTCATTA-----------------------------------------------AAA---TAATT--------------------------TTTGA.........................................................................................................................................................................................2511.00100000000010000000
..AT-------------GGGCAA-TAAAGAG---------------AATCA---------CAATTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
................................................TCA---------CAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGTAAGAAAAATC............................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
..................................................................TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGTAAGAAAAATCTCCAATT------------------------GT...........................................................................................................................................................................................................................................................................................2811.00100000010000000000
..............................G---------------AATCA---------CAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGTAAGA..................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...............................................................TTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGTAAGAAAAATCTCCA........................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATTA-----------------------------------------------AAA---TAATT--------------------------TTTGATTTTAAGG.................................................................................................................................................................................2811.00100000000010000000
...............................................ATCA---------CAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGTAAGAAAA...............................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--------------------------TTTGATTTTAAGGTTTCATGCTTT......................................................................................................................................................................2611.00100000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCAATT------------------------GTCTTTCATTA-----------------------------------------------AAA---TA...........................................................................................................................................................................................................................2511.00100000000100000000
......................A-TAAAGAG---------------AATCA---------CAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGT......................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
...T-------------GGGCAA-TAAAGAG---------------AATCA---------CAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG...........................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGTTTCATGCTTTTTTGAAT-------------------------------------------------------------------GCG---------------------------------------------------------------------------------------TA2911.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TT------------------------GTCTTTCATTA-----------------------------------------------AAA---TAATT--------------------------TTTGA.........................................................................................................................................................................................2611.00100000000010000000
.................................................................TTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGTAAGAAAAATCTCCAATA------------------------.............................................................................................................................................................................................................................................................................................2711.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CAGTAAGAAAAATCTCCAATT------------------------GTCT.........................................................................................................................................................................................................................................................................................2511.00100000000010000000
........................TAAAGAG---------------AATCA---------CAATTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCAGT......................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAGGTTTCATGCTTTTTTGAAT-------------------------------------------------------------------GCG---------------------------------------------------------------------------------------TA3011.00100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGTTTCATGCTTTTTTGAAT-------------------------------------------------------------------GCG---------------------------------------------------------------------------------------T.2711.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--------------------------TTTGATTTTAAGG.................................................................................................................................................................................1580.13100000001000000000
droSec2
TTTT-------------TATAA----------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTA-----------------------A---TTATAT---ATAATA------------------------------------------------------------------------------------------------------------------------AATATAT-TTAAAGCTA---------------------------------------------------------------------------------------TTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
ACCT-------------CCGCTC-----------GGAGCTATGACATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAACGACAAAGCTCCGTCAGGAAAAAG-------------------------------------CGACATAATTCCGTCCGAAAAGTATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-GGCGG--AGA---------------------------------------------------------------------------------------TASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................AATTCCGTCCGAAAAGTATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-GGT................................................................................................2611.00101000000000
droEre2
AGTT-------------CCGCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAGTTTGGCGGAGCC--------------------AAAGCGTTTTTAAAGCGACATAACTCCGCAAATAAAAAAAGGACGGAGATATGTCGAGCTTAGTTCGCCGAAGATATGTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...T-------------CCGCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28220.004080001031
....................CGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24211.502300000023
..................CGCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26211.502380000015
..................CGCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2526.00123000108
..TT-------------CCGCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.5033000000
...T-------------CCGCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.5033000000
...T-------------CCGCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.5033000000
...T-------------CCGCGC-----------GGAGATATGTCGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0022000000
..................CGCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.0022000000
.................CCGCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5011000000
AGTT-------------CCGCGC-----------GGAGATATGTCGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5011000000
...................GCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5011000000
...T-------------CCGCGC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5011000000
.....................GC-----------GGAGATATGTCGTTTT--------------------------------------------------------------------------------------------------------------------------------TAGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5011000000

Generated: 05/16/2015 at 10:23 PM