ID:

dvi_16246

 Coordinate:

scaffold_13047:9868626-9868679 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.5 -3.3 -3.3

Flybase annnotation

CDS [Dvir\GJ23068-cds]; exon [dvir_GLEANR_8431:3]; CDS [Dvir\GJ23068-cds]; exon [dvir_GLEANR_8431:2]; intron [Dvir\GJ23068-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------##################################################
ACCTCGGTTAGTAATACCAGACAACTGTCCAGCACACCCACCGACAATAAGTAAGTTATGGGTGAATTCCTGAAGATGCTCTACTAACTATATTCCTAAACTAGCGAATACTATTTGGATGTGTATAATACCACGCCCAAAATGTCAACATATC
**************************************************(((..((..(((.....)))..))..))).........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060679
140x9_testes_total
 V047
embryo
 SRR060665
9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 V116
male body		 SRR060680
 9xArg_testes_total
 SRR060678
9x140_testes_total
 SRR060657
140_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
.....................................................................................................................GATGTGTATAATACCACGCCC................ 21 0 1 5.00 5 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATAACGAATACTATTTGGATGT................................ 22 2 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GTAATACCAGACAACTGTCCAGC......................................................................................................................... 23 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GATGTGTATAATACCACGCCCAAAAT........... 26 0 1 3.00 3 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTGTATAATACCACGCCCAAAATGT......... 26 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTGTATAATACCACGCCCA............... 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AATAACGAATACTATTTGGATGT................................ 23 2 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................ATAATACCACGCCCAAAATGT......... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CGGTTAGTAATACCAGACAACTGTCC............................................................................................................................ 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CAATAACGAATACTATTTGGATGT................................ 24 3 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTATAATACCACGCCCAAAATGT......... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GATGTGTATAATACCACGCCCAAA............. 24 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GATGTGTATAATACCACGCCCAAAA............ 25 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AACTGTCCAGCACACCCACCGAC............................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AGACAACTGTCCAGCACACCC................................................................................................................... 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTGTATAATACCACGCCCAAAAT........... 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CAACTGTCCAGCACACCCACC................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTGTATAATACCACGCCCAA.............. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......GTTAGTAATACCAGACAACTGTCCAGC......................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGATAATACCACGCCCAAA............. 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ATAATACCACGCCCAAAAT........... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............AATACCAGACAACTGTCCAGC......................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CAATAACGAATACTATTTGGATGTGT.............................. 26 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................ACTGTCCAGCACACCCACCGACAATA......................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................ACCACGCCCAAAATGTCAACA.... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTGTATAATACCACGCCC................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TTTATAATACCACGCCCAAAATGT......... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTGTATAATACCACGCCCAAAATGTCA....... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............AATACCAGACAACTGTCC............................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGCACACCCACCGACAATAACGA..................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GTAATACCAGACAACTGTCCAGCACACC.................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................AACGAATACTATTTGGATGT................................ 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GACAACTGTCCAGCACACCCACCGAC............................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GAATACTATTTGGATGTGT.............................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................ACTGTCCAGCACACCCACCGACA............................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AGTAATACCAGACAACTGTCCA........................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................ACTAACTATATTCCTAAACTAGAA................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TATACCACGCCCAAAATGTCAA...... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................ACACCCACCGACAATAACGAA.................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AGACAACTGTCCAGCACACCCACCGA.............................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TAACGAATACTATTTGGA................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................ACAACTGTCCAGCACACCCACCGACA............................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GCACACCCACCGACAATAACGA..................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................AGACAACTGTCCAGCACACCCACC................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................ATTTGGATGTGTATAATACCACGC.................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................GACAACTGTCCAGCACACCCACCGACA............................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................AATACCACGCCCAAAATGTCAACA.... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CAACTGTCCAGCACACCCACCGACA............................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTATAATACCACGCCCAAAATGTC........ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GTGTATAATACCACGCCCAAAA............ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CAACTGTCCAGCACACCCAC................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.CCTCGGTTAGTAATACCAGAC.................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GATGTGTATAATACCACGCC................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................AACGAATACTATTTGGATG................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ATGTGTATAATACCACGCCCAAAATGT......... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TCGGTTAGTAATACCAGACAACTGTCC............................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GTAATACCAGCCAACTGTCCAGC......................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ACCAGACAACTGTCCAGCACACCCACCGA.............................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ACCAGACGACTGTCCAGCACACCC................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ATAATACCACGCCCAACATGTCAAC..... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................ACAACTGTCCAGCACACCCACC................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................CGCCCAAAATGTCAACATATC 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............AATACCAGACAACTGTCCAG.......................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TAGTAATACCAGACAACTGTCCAGC......................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGCACACCCACCGACAATAAC....................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................ATTTGGATGTGTATAATACCACGCCCA............... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TAATACCAGACAACTGTCCAGCACACC.................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTATAATACCACGCCCAAAAT........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGCACACCCACCGACAATAACGAAT................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................CTGTCCAGCACACCCACCGAC............................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................ACACCCACCGACAATAACGA..................................................................................................... 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ATAATACCACGCCCAAAATGTCAAC..... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AGACAACTGTCCAGCACACCCACCGACA............................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CAACTGTCCAGCACACCCACCGAC............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TAACGAATACTATTTGGATGTGT.............................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GACAACTGTCCAGCACACCCACCGA.............................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGATAATACCACGCCCAAAATGTCAAC..... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CCTCGGTTAGTAATACCAGACA................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TAAGACCAGACAACTGTCCAGCACACC.................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GATGTGTATAATACCACGCCCAA.............. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTATAATACCACGCCCAAAATGTCAACAT... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGAATTCCTGAAGATGCTCTACTA.................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GGCAACTGTCCAGCACACCCACC................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GGAATACCAGACAACTGTCCAGCAC....................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............AATACCAGACAACTGTCCAGCACACCC................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................AATACCACGCCCAAAATGC......... 19 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATAACGAATACTATTTGGAT.................................. 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CAATAACGAATACTATTTGGA................................... 21 3 7 0.43 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................CACCCACCGACAATAACGAAT................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................ATAACGAATACTATTTGGA................................... 19 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................ACAATAACGAATACTATTTGGA................................... 22 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAATTTATGGGTGAATTC..................................................................................... 18 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................GTCCAGTACACCCAATGAC............................................................................................................. 19 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ATAATACCGCGCCAAAAA............ 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................GAGGTTATGGGTGAATTCT.................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................GAAGATGCTAAACTGACT................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TGGAGCCAATCATTATGGTCTGTTGACAGGTCGTGTGGGTGGCTGTTATTCATTCAATACCCACTTAAGGACTTCTACGAGATGATTGATATAAGGATTTGATCGCTTATGATAAACCTACACATATTATGGTGCGGGTTTTACAGTTGTATAG
**************************************************(((..((..(((.....)))..))..))).........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR1106729
mixed whole adult body
 SRR1106727
larvae
 SRR1106728
larvae
 SRR060667
160_females_carcasses_total
 V053
head
 SRR060682
9x140_0-2h_embryos_total
 SRR1106730
embryo_16-30h
.........................................................................TCTACGAGATGGTTGAC................................................................ 17 2 20 1.75 35 9 16 9 0 0 0 1
..........................................................................CTACGAGATGGTTGA................................................................. 15 1 13 1.08 14 12 0 2 0 0 0 0
..........................................................................CTACGAGATGGTTGAT................................................................ 16 1 3 1.00 3 3 0 0 0 0 0 0
.........................................................................TCTACGAGATGGTTGA................................................................. 16 1 5 0.60 3 0 3 0 0 0 0 0
.........................................................................TCTACGAGATGGTTG.................................................................. 15 1 7 0.57 4 2 2 0 0 0 0 0
.....................................................................................................................CTTCACAGATTATGGTGC................... 18 2 3 0.33 1 0 0 0 1 0 0 0
..............TTGGTCTGCAGACAGGTCGTGT...................................................................................................................... 22 3 3 0.33 1 0 0 0 0 1 0 0
....................................................TTCAATACTCAAGTAAGGACT................................................................................. 21 3 7 0.14 1 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:9868576-9868729 - dvi_16246 AC--CTCGGTT---AGTAATACCAGACAACTGTCCAGCACACCCACCGA----CAATAAGTAAGTTATGGGT--GA--ATT----------------------------------------------------CCTGAAG--A--------TG----------CTCTA---------CT--------A------ACTATA-TTCCTAA-------ACTAG-------------------------CGAA------------TACTATTTGGATGTGTATAATACCACGCCCAAAATGTCAACATATC
droMoj3 scaffold_6540:9503221-9503375 + AA--TACTGTT---AGTAATACAAGGCTAATATCCTCA-ACACCTATGC---AGAATGGGTAGGTTTCAA-G--AA--ACA------------------------------------------CT--------CATGCAA-----------AT----------CTGTG---------CT--------A------ACTGTC-ATGT---TTAC---TTCAG-------------------------CGAA------------TACTTTTTGGATGTATACAAAACCACACCCAAAATGTCCACCTATT
droGri2 scaffold_14906:7568810-7568966 + AA--CACCGTT---AGTAACACAAGGCAAAAGTCCACCACGCCCACTAC----AGATCCGTAAGTCCTGCTT--GA--ATT------------------------------------------CTCT-------TTGTAT-------TAAC-CCAC----------------------TT-------A------AC-TTC-TAAT---TTGC---TTTAG-------------------------GAAT------------TACTATTCGGATGTTTATGAAACAACGCCAAAGATGTCCACATATC
droWil2 scf2_1100000004921:1759061-1759233 - AC--GGGTCTG---AGCAATATGCCCGT---------CAAAAAAATAACACCA----AAGTGAGTAACC--------------------------------------------TAAAGAGAGTTTTGCGGTTTTCTTTAAGTC--------AG----------TTTTG---------TT--------A------TATTTCGT---CATTCCT---TATAG-------------------------TGATCAATTCCCCGACTATGTGTGGTGTGAATTCGAAGAGTCCGTGCCCATGTCAACATATT
dp5 2:6439650-6439826 + AA--CACTGTC---AGTAACACCCGACAGCTGGGATCCTACCCGAGCAC----AGAGAGGCAAGTTTTT-----TAGT--CCTCGATCAGCAGACGGTTTGCTTACCTTTCCA--------------------------A-----------T---------------------------CGATTCCCA------ATCCC-GC---CCCTCCC---TGCAG-------------------------TGGC------------TACTATGAGGATGTGTACGAGACGACGCCAAAGATGTCTACCTATA
droPer2 scaffold_0:266342-266518 + AA--CACTGTC---AGTAACACCCGACAGCTGGGATCCTACCCGAGCAC----AGAGAGGCAAGTTTTT-----TAAC--CCTCGATCAGCAGACGGTTTGCTTACCTTTCCA--------------------------A-----------T---------------------------CGATTCCCA------ATCCC-GC---CCGTCCC---TGCAG-------------------------TGGC------------TACTATGAGGATGTGTACGAGACGACGCCAAAGATGTCTACCTATA
droAna3 scaffold_13340:8573644-8573809 + AA--CTCGGTC---AGTAACACGCGTCTGATTGGATCCTACCCTAGCAC----TGAAGCGTAAGTTTTGAAA--CA--AAC------------------------------------------CTCG-----TTCTTTAAACCATAATGGCTG-GT----------------------TT-------A------TC-ATC-AAAA---TCTT---AACAG-------------------------TGGC------------TATTTCGAGGATGTGTTTGCGACCACGCCCATTATGTCCACCTACC
droBip1 scf7180000396708:264407-264567 - AA--CTCCGAC---AGCAACACCCGTCTCATTGGATCCTACCCCAGCAC----TGAAGCGTAAGTTTTGT-----AGCATC------------------------------------------T--------TCCTTCAAGTC--------AGCAACATTATC------------------------A------TTATC-CC---CATTCCG---AACAG-------------------------TGGC------------TATTTTGAGGATGTGTTTGCTACCACACCCATTATGTCTACCTACC
droKik1 scf7180000302388:1498011-1498168 - AA--TACGGCC---AGTAACACGCGCTTGATTGGATCCTATCCTCATGC----CGAAGAGTAAGTTACCGTT--AG--TCC------------------------------------------CT----------TGTTT--G--------TA----------TCGCA---------TT--------A------ATTTTC-TCCT---TTGCTTTGTCAG-------------------------GGGA------------TACTATGTGGATGTGTACAAGACCACGCCTACTATGTCTACTTACA
droFic1 scf7180000453776:263337-263501 + AC--CACCGTC---TCTAACATGCCCAT---------TGTTTCCACCAACGAT----CAGTGAGTACTTAAT------------------------------TTCATTTACCA----------------ATA---AGC-------------AACACCTAAAAC------------------------A------ATTTT-CC---TAAACCG---TG--------------TAG-----------CGCCACCATATCGAGTTACGTGTGGGATCACTTTGCTGAATCCTTGCCCATGTCCACTTATC
droEle1 scf7180000491212:1992071-1992225 + GTTATTCAGCCATATCCAATATGCCAGT---------CAAGGAAATATTAGCT-CATGGGTAAATAGATA--------------------------------------------------ACTTAAGCT----ATTTAAA-----------AT----------ATT-----------------TATTA------ACTTTG-A---ATTCTGT---TGCAG-------------------------TGAT------------TTAAAGACCACCTTGTTTCACACAACCCCACCAATATCCACCTATC
droRho1 scf7180000779659:22203-22371 + AC--CGGTCTC---AGCAATATGCCCGT---------AAAGGAAACTAAAACA----CAGTAAATCATATTTTATAATT-----GAT---------------------------------------------TTAAATAG-------GATT-TCAATATTTAT----G---------TT--------G------CATTTA-TT------TTT---CG--------------CAG-----------TGAATCACTTCCCGATTACATTTGGACCGAATTTCAAGAATCATTGCCAATGTCAACTTATC
droBia1 scf7180000302136:3175824-3175989 - AC--CACAGTT---TCTAATATGCCCAT---------TGTGTCCACCAACGAT----CAGTGAGTGTTGGCT----------------------------------------------TAAATATTC-------CTATAA-------CGAC-TCTGTTATAAC----G---------TA--------A------TCTTTG-TA------CTC---TA--------------TAG-----------TGCCACCATCCCCAGCTATGTGTGGGATCACTTTGCTGAATCGCTGCCCATGTCATCTTATC
droTak1 scf7180000415711:1580912-1581065 - CA--TTCGGCCATATCCAATATGCCAGT---------CAAGGAAATACTGTCG-CATGGGTAAGTCGATA-------------------------------------------------AAGTTTCTCAAGATTCTAAA-------------C------------C-----------------TAATA------ACTCTT-G---CTTTCTT---CATAG-------------------------CGAA------------TTAAAAACCACCTTGTTTCAAACAACCCCACCAATTTCCACCTATC
droEug1 scf7180000409490:881859-882053 + AA--CTCGGCC---AGTAACACCCGTCTGATCCAATCTACTCCCAGCAC----TGAGGAGTAAGTAACTCTA--AT--ATT----------------------TTGTAA-CC-TAAA---ATTAAGGCATTTATTTTTAAAAA--------AG----------TTTTAACTAACCCAAA--------ATGTTTATATTTACC---CAT---G---CTTAG-------------------------AGGT------------TATTTTACGGATGTGTACAAGACGACTCCTAAGATGTCCACCTATC
dm3 chr3R:24968747-24968912 + AC--CACCATA---TCCAACATGCCCAT---------TGTGTCCAGCAACGAT----CAGTGAGTATTGCCT----------------------------------------------TTGCTATCA-------AAGTAA-------TCAT-TCTATTTAAGT----G---------TA--------A------TCTTTG-AT------CTT---CT--------------TAG-----------CGCCACCATGCCAAGCTATGTGTGGGATCACTTTGCCGAATCGCTGCCCATGTCCACCTATC
droSim2 3r:24433937-24434100 - AC--GGGTATT---AGCAACATGCCCGT---------GAAGGAAACCAAGCCA----CAGTTAGTCATCGCA----------------------------------------------TAGCTTTCAGAACTTTCCACAG--A--------AG----------CTACA---------TT--------A------ACTTTA-TT------CT----TC--------------CAG-----------TGAAACCCTCGCCGACTACATATGGTGCGAGTTCCAGGAGTCGGTGCCCATGTCCACCTACC
droSec2 scaffold_4:3934339-3934502 - AC--GGGTATA---AGCAACATGCCCGT---------GAAGGAAACCAAGCCA----CAGTAAGTCATCGCG----------------------------------------------TAACTTTCAGAACTTTCCACAG--A--------AG----------CTACA---------TT--------A------ACTTTA-TT------CT----TC--------------CAG-----------TGAAACCCTCGCCGACTACATATGGTGCGAGTTCCAGGAGTCGGTGCCCATGTCCACCTACC
droYak3 3R:21429903-21430062 + AC--CGGAGTC---AGTAATATGCCTGT---------AAAGGAAACCAAGCCA----CAGTACATTTTACTC----------------------------------------------TAGGTTTGC-------TCTTAA------------ACTGTGATAAA----T---------TA----------------------------------------GTGACTACTTTTCAG-----------TGAATCCCTTACCGATTACGTATGTACCGAGTTCCAGGAGTCGTTGCCAATCTCCACCTATC
droEre2 scaffold_4770:17704017-17704159 + AT--A---------TCCAATATGCCAGT---------TAAGGAAGTACTTTCT-CATGGGTAAGTGTATAAT------------------------------TATATAT-CTC-A---GGCCTTATTAAACTCTTC------------------------------------------------------------------------------------------------TGTGTATTTTCAGTGAC------------TTGAAGACCACCTCATTTCACACAACACCACCGATTTCAACCTACC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AC--CTCGGTT---AGTAATACCAGACAACTGTCCAGCACACCCACCGA----CAATAAGTAAGTTATGGGT--GA--ATT----------------------------------------------------CCTGAAG--A--------TG----------CTCTA---------CT--------A------ACTATA-TTCCTAA-------ACTAG-------------------------CGAA------------TACTATTTGGATGTGTATAATACCACGCCCAAAATGTCAACATATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................GATGTGTATAATACCACGCCC................2115.005002200000000000000000000000001000000000000000000000000000000000
...............GTAATACCAGACAACTGTCCAGC.............................................................................................................................................................................................................................................................................2313.003000300000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GATGTGTATAATACCACGCCCAAAAT...........2613.003001000000000000000100000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGTGTATAATACCACGCCCAAAATGT.........2613.003002100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGTGTATAATACCACGCCCA...............2013.003003000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................ATAATACCACGCCCAAAATGT.........2112.002002000000000000000000000000000000000000000000000000000000000000
......CGGTT---AGTAATACCAGACAACTGTCC................................................................................................................................................................................................................................................................................2612.002000000000000000000000000000002000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GTATAATACCACGCCCAAAATGT.........2312.002002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GATGTGTATAATACCACGCCCAAA.............2412.002001000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GATGTGTATAATACCACGCCCAAAA............2512.002001000000000000100000000000000000000000000000000000000000000000
...........................AACTGTCCAGCACACCCACCGA----C.............................................................................................................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
.......................AGACAACTGTCCAGCACACCC.......................................................................................................................................................................................................................................................................2112.002001100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGTGTATAATACCACGCCCAAAAT...........2412.002001100000000000000000000000000000000000000000000000000000000000
..........................CAACTGTCCAGCACACCCACC....................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGTGTATAATACCACGCCCAA..............2111.001000000000000000000000000000000000000010000000000000000000000000
........GTT---AGTAATACCAGACAACTGTCCAGC.............................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................ATAATACCACGCCCAAAAT...........1911.001000000000000000100000000000000000000000000000000000000000000000
.................AATACCAGACAACTGTCCAGC.............................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
............................ACTGTCCAGCACACCCACCGA----CAATA.........................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................ACCACGCCCAAAATGTCAACA....2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGTGTATAATACCACGCCC................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGTGTATAATACCACGCCCAAAATGTCA.......2811.001001000000000000000000000000000000000000000000000000000000000000
.................AATACCAGACAACTGTCC................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...............GTAATACCAGACAACTGTCCAGCACACC........................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
........................GACAACTGTCCAGCACACCCACCGA----C.............................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GAA------------TACTATTTGGATGTGT..............................1911.001000000000000000000000000000000000000000000000000000000000001000
............................ACTGTCCAGCACACCCACCGA----CA............................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............AGTAATACCAGACAACTGTCCA...............................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................A---------CT--------A------ACTATA-TTCCTAA-------ACTAG-------------------------AA............................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................AGACAACTGTCCAGCACACCCACCGA----..............................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.........................ACAACTGTCCAGCACACCCACCGA----CA............................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.......................AGACAACTGTCCAGCACACCCACC....................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................ATTTGGATGTGTATAATACCACGC..................2411.001000000000000000000000000100000000000000000000000000000000000000
........................GACAACTGTCCAGCACACCCACCGA----CA............................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AATACCACGCCCAAAATGTCAACA....2411.001001000000000000000000000000000000000000000000000000000000000000
..........................CAACTGTCCAGCACACCCACCGA----CA............................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GTATAATACCACGCCCAAAATGTC........2411.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GTGTATAATACCACGCCCAAAA............2211.001001000000000000000000000000000000000000000000000000000000000000
..........................CAACTGTCCAGCACACCCAC.....................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.C--CTCGGTT---AGTAATACCAGAC........................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GATGTGTATAATACCACGCC.................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................ATGTGTATAATACCACGCCCAAAATGT.........2711.001000100000000000000000000000000000000000000000000000000000000000
.....TCGGTT---AGTAATACCAGACAACTGTCC................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
....................ACCAGACAACTGTCCAGCACACCCACCGA----..............................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.........................ACAACTGTCCAGCACACCCACC....................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGCCCAAAATGTCAACATATC2111.001000000000000000000000000000001000000000000000000000000000000000
.................AATACCAGACAACTGTCCAG..............................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........T---AGTAATACCAGACAACTGTCCAGC.............................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...................................AGCACACCCACCGA----CAATAAC.......................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................ATTTGGATGTGTATAATACCACGCCCA...............2711.001001000000000000000000000000000000000000000000000000000000000000
................TAATACCAGACAACTGTCCAGCACACC........................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GTATAATACCACGCCCAAAAT...........2111.001001000000000000000000000000000000000000000000000000000000000000
.............................CTGTCCAGCACACCCACCGA----C.............................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................ATAATACCACGCCCAAAATGTCAAC.....2511.001001000000000000000000000000000000000000000000000000000000000000
.......................AGACAACTGTCCAGCACACCCACCGA----CA............................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..........................CAACTGTCCAGCACACCCACCGA----C.............................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
........................GACAACTGTCCAGCACACCCACCGA----..............................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.C--CTCGGTT---AGTAATACCAGACA.......................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GATGTGTATAATACCACGCCCAA..............2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GTATAATACCACGCCCAAAATGTCAACAT...2911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................T--GA--ATT----------------------------------------------------CCTGAAG--A--------TG----------CTCTA---------CT--------A------.................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.................AATACCAGACAACTGTCCAGCACACCC.......................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AATACCACGCCCAAAATGC.........1920.501000100000000000000000000000000000000000000000000000000000000000
droMoj3
AA--TACTGTT---AGTAATACAAGGCTAATATCCTCA-ACACCTATGC---AGAATGGGTAGGTTTCAA-G--AA--ACA------------------------------------------CT--------CATGCAA-----------AT----------CTGTG---------CT--------A------ACTGTC-ATGT---TTAC---TTCAG-------------------------CGAA------------TACTTTTTGGATGTATACAAAACCACACCCAAAATGTCCACCTATTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................AATATCCTCA-ACACCTATGC---AGAATG.........................................................................................................................................................................................................................................................2612.002200000
.............................ATATCCTCA-ACACCTATGC---AGAAT..........................................................................................................................................................................................................................................................2412.002200000
...............................ATCCTCA-ACACCTATGC---AGAATG.........................................................................................................................................................................................................................................................2311.001100000
...........................................................................................................................................................................................................................G-------------------------CGAA------------TACTTTTTGGATG.................................1811.001100000
.................................................................................................................................................................................................................................................................................GTATACAAAACCACACCCAAA.............2111.001100000
............................AATATCCTCA-ACACCTATGC---...............................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................G-------------------------CGAA------------TACTTTTTGGATGT................................1911.001100000
.............................ATATCCTCA-ACACCTATGC---AGAATG.........................................................................................................................................................................................................................................................2511.001100000
............................AATATCCTCA-ACACCTATGC---AGAATGGC.......................................................................................................................................................................................................................................................2811.001100000
........................GGCTAATATCCTCA-ACACCTATGC---A..............................................................................................................................................................................................................................................................2511.001100000
...........................................................................................................................................................................................................................G-------------------------CGAA------------TACTTTTTGGATGTAT..............................2111.001100000
AA--TACTGTT---AGTAATACAAGGCT.......................................................................................................................................................................................................................................................................................2311.001100000
.......TGTT---AGTAATACAAGGCTTG.....................................................................................................................................................................................................................................................................................2011.001100000
....TACTGTT---AGTAATACAAGG.........................................................................................................................................................................................................................................................................................1911.001100000
..........................CTAATATCCTCA-ACACCTATGC---AGAATG.........................................................................................................................................................................................................................................................2811.001100000
.................................................................................................................................................................................................................................................................................GTATACAAAACCACACCCAAAAT...........2311.001100000
....................................................................................................................................................................................................................................................................................TACAAAACCACACCCAAAAT...........2011.001100000
.................................................................................................................................................................................................................................................................................GTATACAAAACCACACCCAAAATGTCCA......2811.001100000
...............................ATCCTCA-ACACCTATGC---AG.............................................................................................................................................................................................................................................................1911.001100000
................................TCCTCA-ACACCTATGC---AGAA...........................................................................................................................................................................................................................................................2011.001100000
....................................CA-ACACCTATGC---AGAATGGC.......................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................................................................................................................ATGTATACAAAACCACACCCAAA.............2311.001100000
droGri2
AA--CACCGTT---AGTAACACAAGGCAAAAGTCCACCACGCCCACTAC----AGATCCGTAAGTCCTGCTT--GA--ATT------------------------------------------CTCT-------TTGTAT-------TAAC-CCAC----------------------TT-------A------AC-TTC-TAAT---TTGC---TTTAG-------------------------GAAT------------TACTATTCGGATGTTTATGAAACAACGCCAAAGATGTCCACATATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.A--CACCGTT---AGTAACACAAGGCAAA.....................................................................................................................................................................................................................................................................................2411.00110
......................................................................................................................................................................................................................................................AAT------------TACTATTCGGATGTTTATGA..........................2311.00101
...............................GTCCACCACGCCCACTAC----AGATCC........................................................................................................................................................................................................................................................2411.00110
......................................................................................................................................................................................................................................................AAT------------TACTATTCGGATGTTTATG...........................2211.00101
....................ACAAGGCAAAAGTCCACCACGC.........................................................................................................................................................................................................................................................................2211.00110
............................AAAGTCCACCACGCCCACT....................................................................................................................................................................................................................................................................1911.00110
..................ACACAAGGCAAAAGTCCACCAC...........................................................................................................................................................................................................................................................................2211.00110
.....................CAAGGCAAAAGTCCACCACGCCCACT....................................................................................................................................................................................................................................................................2611.00110
..............................................................................................................................................................................................................................................................................GATGTTTATGAAACAACGCC.................2011.00110
droWil2
AC--GGGTCTG---AGCAATATGCCCGT---------CAAAAAAATAACACCA----AAGTGAGTAACC--------------------------------------------TAAAGAGAGTTTTGCGGTTTTCTTTAAGTC--------AG----------TTTTG---------TT--------A------TATTTCGT---CATTCCT---TATAG-------------------------TGATCAATTCCCCGACTATGTGTGGTGTGAATTCGAAGAGTCCGTGCCCATGTCAACATATTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................GTGGTGTGAATTCGAAGAGT.....................2012.00200101
.......................................................................................................................................................................................................................................................ATCAATTCCCCGACTATGTGT.......................................2112.00200200
.............................................................................................................................................................................................................................................................................GTGTGAATTCGAAGAGTC....................1811.00100001
....................................................................................................................................................................................................................................................................CTATGTGTGGTGTGAATTCGAAGAGT.....................2611.00100001
............................................................................................................................................................................................................................................................TTCCCCGACTATGTGTGGTGTGA................................2311.00100010
.......................................................................................................................................................................................................................................................................TGTGTGGTGTGAATTCGAAGA.......................2111.00100001
............................................................................................................................................................................................................................................................................GGTGTGAATTCGAAGAGTCCGTG................2311.00100100
...................................................................................................................................................................TTTTG---------TT--------A------TATTTCGT---CATTCCT---TATAG-------------------------..............................................................2811.00110000
.......TCTG---AGCAATATGCCCGT---------C.............................................................................................................................................................................................................................................................................1911.00110000
...........................................................................................................................................................................................................................................................................TGGTGTGAATTCGAAGAGTC....................2011.00100001
dp5
AA--CACTGTC---AGTAACACCCGACAGCTGGGATCCTACCCGAGCAC----AGAGAGGCAAGTTTTT-----TAGT--CCTCGATCAGCAGACGGTTTGCTTACCTTTCCA--------------------------A-----------T---------------------------CGATTCCCA------ATCCC-GC---CCCTCCC---TGCAG-------------------------TGGC------------TACTATGAGGATGTGTACGAGACGACGCCAAAGATGTCTACCTATASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................GTACGAGACGACGCCAAAG.............1919.0090800001000
...................................................................................................................................................................................................................................................................................GTACGAGACGACGCCAAAGAT...........2115.0050400100000
...........................................................................................................................................................................................................................G-------------------------TGGC------------TACTATGAGGATGT................................1914.0040400000000
..................................ATCCTACCCGAGCAC----AGAGA.........................................................................................................................................................................................................................................................2013.0030300000000
....................................................................................................................................................................................................................................................................................TACGAGACGACGCCAAAG.............1812.0020200000000
.....................................................................................................................................................................................................................................................................................ACGAGACGACGCCAAAGAT...........1912.0020200000000
.....................................................................................................................................................................................................................................................................................ACGAGACGACGCCAAAGATGT.........2112.0020100001000
..................................ATCCTACCCGAGCAC----AGAGAGT.......................................................................................................................................................................................................................................................2212.0020100001000
...................................................................................................................................................................................................................................................................................GTACGAGACGACGCCAAAGA............2012.0020200000000
AA--CACTGTC---AGTAACACCCGACAGCTG...................................................................................................................................................................................................................................................................................2711.0010100000000
........................................................................................................................................................................................................................................................C------------TACTATGAGGATGTGTACGAGAC.......................2411.0010000001000
...................................................................................CGATCAGCAGACGGTTTGCT............................................................................................................................................................................................................2011.0010100000000
.................................GATCCTACCCGAGCAC----AGAG..........................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................GGATGTGTACGAGACGACGCCAAAGAT...........2711.0010100000000
...........................AGCTGGGATCCTACCCGAC.....................................................................................................................................................................................................................................................................1911.0010010000000
.........................................................................................................................................................................................................................................................................ATGAGGATGTGTACGAGA........................1811.0011000000000
AA--CACTGTC---AGTAACACCCGAC........................................................................................................................................................................................................................................................................................2211.0010100000000
.......................................................................................................................................................................................................................................................................CTATGAGGATGTGTACGAGACGACGC..................2611.0010010000000
.......................CGACAGCTGGGATCCTACC.........................................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................TGAGGATGTGTACGAGAC.......................1811.0010100000000
.................................GATCCTACCCGAGCAC----AGAGAGTG......................................................................................................................................................................................................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................................GGATGTGTACGAGACGACGC..................2011.0010100000000
......................................................................................................................................................................................................................................................GGC------------TACTATGAGGATGTGT..............................1911.0010000001000
.......TGTC---AGTAACACCCGACAGCTGGGATC..............................................................................................................................................................................................................................................................................2711.0010010000000
......................................................................................................................................................................................................................................................GGC------------TACTATGAGGATGTGTACGA..........................2311.0010010000000
.....................................................................................................................................................................................................................................................................TACTATGAGGATGTGTACGAGA........................2211.0010100000000
...............................................................................................................................................................................................................................................................................ATGTGTACGAGACGACGCCA................2011.0010100000000
........................................................................................................................................................................................................................................................................TATGAGGATGTGTACGAGA........................1911.0010100000000
..............................................................................................................................................................................................................................................................................GATGTGTACGAGACGACGCCAAAG.............2411.0010100000000
.............................CTGGGATCCTACCCGAGCAC----..............................................................................................................................................................................................................................................................2011.0010100000000
........GTC---AGTAACACCCGACAGCTGGG.................................................................................................................................................................................................................................................................................2311.0010100000000
...................CACCCGACAGCTGGGATCCTACCCGA......................................................................................................................................................................................................................................................................2611.0010100000000
.......................................................................................................................................................................................................................................................GC------------TACTATGAGGATGTGTACGA..........................2211.0010100000000
...........................AGCTGGGATCCTACCCGAG.....................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................GAGACGACGCCAAAGATGTCTACCTAT.2711.0010100000000
.................................GATCCTACCCGAGCAC----AGAGAGT.......................................................................................................................................................................................................................................................2311.0010100000000
...........................................................................................................................................................................................................................................................................GAGGATGTGTACGAGACGACGC..................2211.0010100000000
..................................ATCCTACCCGAGCAC----AGAG..........................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................CTATGAGGATGTGTACGAGA........................2011.0010000001000
....................ACCCGACAGCTGGGATCCTACCCGAGC....................................................................................................................................................................................................................................................................2711.0010100000000
.........TC---AGTAACACCCGACAGCTGGG.................................................................................................................................................................................................................................................................................2211.0010100000000
AA--CACTGTC---AGTAACACCCGACAGCTGG..................................................................................................................................................................................................................................................................................2811.0011000000000
.........................................................................................................................................................................................................................................................................ATGAGGATGTGTACGAGACGACGCC.................2511.0010100000000
......................................................................................................................................................................................................................................................GGC------------TACTATGAGGATGTGTACGAGACG......................2711.0010100000000
...................................................................................................................................................................................................................................................................................GTACGAGACGACGCCAAAGATGT.........2311.0010000001000
...................................................................................................................................................................................................................................................................................GTACGAGACGACGCCAAAGATGTC........2411.0010100000000
......................................................................................................................................................................................................................................................GGC------------TACTATGAGGATGTGTACGAGA........................2511.0010100000000
......................................................................................................................................................................................................................................................GGC------------TACTATGAGGATGTGTACGAGAC.......................2611.0010100000000
..................ACACCCGACAGCTGGGATCCTACCCGA......................................................................................................................................................................................................................................................................2711.0010100000000
..........................................................................................................................................................................................................................AG-------------------------TGGC------------TACTATGAGGATGTGTACG...........................2511.0010100000000
......................................................................................................................................................................................................................................................................ACTATGAGGATGTGTACGA..........................1911.0010100000000
..........C---AGTAACACCCGACAGCTGGG.................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................TGGC------------TACTATGAGGATGTGTACGAGAC.......................2711.0010010000000
.......................................................................................................................................................................................................................................................................CTATGAGGATGTGTACGAGACGA.....................2311.0010100000000
............................................................................................................................................................................................................................................................................AGGATGTGTACGAGACGACGCCA................2311.0010100000000
...........................................................................................................................................................................................................................G-------------------------TGGC------------TACTATGAGGATGTGTACGAGAC.......................2811.0010000001000
......CTGTC---AGTAACACCCGACAGCTGG..................................................................................................................................................................................................................................................................................2411.0010100000000
.........................................................................................................................................................................................................................................................................ATGAGGATGTGTACGAGAC.......................1911.0010100000000
.........................................................................................................................................................................................................................................................................................GACGACGCCAAAGATGTCTACCTAT.2511.0010100000000
...............................................................................................................................................................................................................................................................................ATGTGTACGAGACGACGCCAAAG.............2311.0010100000000
droPer2
AA--CACTGTC---AGTAACACCCGACAGCTGGGATCCTACCCGAGCAC----AGAGAGGCAAGTTTTT-----TAAC--CCTCGATCAGCAGACGGTTTGCTTACCTTTCCA--------------------------A-----------T---------------------------CGATTCCCA------ATCCC-GC---CCGTCCC---TGCAG-------------------------TGGC------------TACTATGAGGATGTGTACGAGACGACGCCAAAGATGTCTACCTATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................TACTATGAGGATGTGTACGAGAC.......................2315.005500000
...................................................................................................................................................................................................................................................................................GTACGAGACGACGCCAAAGAT...........2114.004310000
AA--CACTGTC---AGTAACACCC...........................................................................................................................................................................................................................................................................................1913.003300000
..............................................................................................................................................................................................................................................................................GATGTGTACGAGACGACGCC.................2013.003000003
........................................................................................................................................................................................................................................................................TATGAGGATGTGTACGAGA........................1913.003210000
..............................................................................................................................................................................................................................................................................GATGTGTACGAGACGACGC..................1913.003000003
AA--CACTGTC---AGTAACACCCGAC........................................................................................................................................................................................................................................................................................2213.003300000
AA--CACTGTC---AGTAACACC............................................................................................................................................................................................................................................................................................1812.002200000
...................................................................................................................................................................................................................................................................................GTACGAGACGACGCCAAAGATGT.........2312.002010001
..............AGTAACACCCGACAGCTGGG.................................................................................................................................................................................................................................................................................2012.002020000
......................CCGACAGCTGGGATCCTACCCGAG.....................................................................................................................................................................................................................................................................2412.002200000
........................................................................................................................................................................................................................................................C------------TACTATGAGGATGTGTACGAGAC.......................2412.002100001
.................................GATCCTACCCGAGCAC----AGAGAGT.......................................................................................................................................................................................................................................................2312.002000002
...........................................................................................................................................................................................................................................................................GAGGATGTGTACGAGACGACGCCAAAG.............2712.002000002
......................CCGACAGCTGGGATCCTACCCGA......................................................................................................................................................................................................................................................................2311.001010000
......................................................................................................................................................................................................................................................................................CGAGACGACGCCAAAGAT...........1811.001001000
.....................................................................................................................................................................................................................................................................TACTATGAGGATGTGTACGAGACGAC....................2611.001100000
....................ACCCGACAGCTGGGATCCTACCCGAG.....................................................................................................................................................................................................................................................................2611.001010000
...................................................................................................................................................................................................................................................................................GTACGAGACGACGCCAAA..............1811.001100000
........................................................................................................................................................................................................................................................................TATGAGGATGTGTACGAGACGACGC..................2511.001100000
............................................................................................................................................................................................................................................................................AGGATGTGTACGAGACGACG...................2011.001000001
..............................................................................................................................................................................................................................................................................GATGTGTACGAGACGACGCCAAAGATGT.........2811.001000001
..............................................................................................................................................................................................................................................................................GATGTGTACGAGACGACGCCA................2111.001010000
.......................................................................................................................................................................................................................................................................................GAGACGACGCCAAAGATGT.........1911.001010000
....................................................................................................................................................................................................................................................................................TACGAGACGACGCCAAAG.............1811.001010000
.........................................................................................................................................................................................................................................................................ATGAGGATGTGTACGAGACGACGCCAA...............2711.001100000
......................................................................................................................................................................................................................................................GGC------------TACTATGAGGATGTGT..............................1911.001000001
..........................................................................................................................................................................................................................AG-------------------------TGGC------------TACTATGAGGATGT................................2011.001010000
.......................................................................................................................................................................................................................................................................CTATGAGGATGTGTACGA..........................1811.001000001
....CACTGTC---AGTAACACCCGA.........................................................................................................................................................................................................................................................................................1911.001001000
......................................................................................................................................................................................................................................................GGC------------TACTATGAGGATGTGTA.............................2011.001010000
..............................................................................................................................................................................................................................................................................GATGTGTACGAGACGACGCCAA...............2211.001000001
.A--CACTGTC---AGTAACACCCGACAGCTGG..................................................................................................................................................................................................................................................................................2711.001010000
.............................CTGGGATCCTACCCGAGC....................................................................................................................................................................................................................................................................1811.001010000
.....................................................................................................................................................................................................................................................................................ACGAGACGACGCCAAAGATG..........2011.001001000
..............................................................................................................................................................................................................................................................................GATGTGTACGAGACGACGCCAAA..............2311.001000001
.....................................................................................................................................................................................................................................................................................ACGAGACGACGCCAAAGATGTCTA......2411.001010000
..............AGTAACACCCGACAGCTGGGATCCT............................................................................................................................................................................................................................................................................2511.001010000
............................................................................................................................................................................................................................................................................AGGATGTGTACGAGACGA.....................1811.001010000
.........................................................................................................................................................................................................................................................................................GACGACGCCAAAGATGTCTACCT...2311.001000001
..................................ATCCTACCCGAGCAC----AGAGAGT.......................................................................................................................................................................................................................................................2211.001010000
..............................................................................................................................................................................................................................................................................GATGTGTACGAGACGACGCCAAAGAT...........2611.001010000
........................................................................................................................................................................................................................................................C------------TACTATGAGGATGTGTACGAGACGA.....................2611.001100000
.........................................................................................................................................................................................................................................................................ATGAGGATGTGTACGAGA........................1811.001010000
........................................................................................................................................................................................................................................................................TATGAGGATGTGTACGAGACGA.....................2211.001100000
...........................................................................................................................................................................................................................G-------------------------TGGC------------TACTATGAGGATGT................................1911.001010000
.........................................................................................................................................................................................................................................................................ATGAGGATGTGTACGAGAC.......................1911.001000001
............................................................................................................................................................................................................................................................................AGGATGTGTACGAGACGACGCCAAA..............2511.001010000
droAna3
AA--CTCGGTC---AGTAACACGCGTCTGATTGGATCCTACCCTAGCAC----TGAAGCGTAAGTTTTGAAA--CA--AAC------------------------------------------CTCG-----TTCTTTAAACCATAATGGCTG-GT----------------------TT-------A------TC-ATC-AAAA---TCTT---AACAG-------------------------TGGC------------TATTTCGAGGATGTGTTTGCGACCACGCCCATTATGTCCACCTACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................GGC------------TATTTCGAGGATGTGTTTGC..........................2326.5013062050
.................AACACGCGTCTGATTGGATC..............................................................................................................................................................................................................................................................................2025.5011170120
........................................................................................................................................................................................................................................................C------------TATTTCGAGGATGTGTTTGC..........................2124.509042021
........................GTCTGATTGGATCCTACCCTAGC....................................................................................................................................................................................................................................................................2323.006020004
.......................................................................................................................................................................................................................................................GC------------TATTTCGAGGATGTGTTTGC..........................2222.505031010
.................AACACGCGTCTGATTGGATCC.............................................................................................................................................................................................................................................................................2122.505050000
...............GTAACACGCGTCTGATTGG.................................................................................................................................................................................................................................................................................1922.004120010
.......GGTC---AGTAACACGCGTCTG......................................................................................................................................................................................................................................................................................1922.004400000
..............................................................................................................................................................................................................................................................................GATGTGTTTGCGACCACGCCC................2122.004130000
...............GTAACACGCGTCTGATTGGATC..............................................................................................................................................................................................................................................................................2221.503020010
........................GTCTGATTGGATCCTACCCTA......................................................................................................................................................................................................................................................................2121.503200010
.....................................................................................................................................................................................................................................................TGGC------------TATTTCGAGGATGTGTTTGC..........................2421.503030000
.....................................................................................................................................................................................................................................................................TATTTCGAGGATGTGTTTGC..........................2021.503010020
..............................................................................................................................................................................................................................................................................GATGTGTTTGCGACCACGCC.................2021.503030000
..................................ATCCTACCCTAGCAC----TGAAGCT.......................................................................................................................................................................................................................................................2221.002002000
.................AACACGCGTCTGATTGGATCCTACC.........................................................................................................................................................................................................................................................................2521.002110000
.................................GATCCTACCCTAGCAC----TGAAGCC.......................................................................................................................................................................................................................................................2321.002020000
.......GGTC---AGTAACACGCGTCT.......................................................................................................................................................................................................................................................................................1821.002110000
......................................................................................................................................................................................................................................................................ATTTCGAGGATGTGTTTGCGAC.......................2221.002020000
......................................................................................................................................................................................................................................................GGC------------TATTTCGAGGATGTGTTTGCGACC......................2721.002020000
.....................................CTACCCTAGCAC----TGAAGCT.......................................................................................................................................................................................................................................................1921.002011000
.....................................CTACCCTAGCAC----TGAAGCTGG.....................................................................................................................................................................................................................................................2121.002002000
...............................................................................................................................................................................................................................................................................ATGTGTTTGCGACCACGCCC................2021.002020000
........................GTCTGATTGGATCCTACCCT.......................................................................................................................................................................................................................................................................2021.002010001
......CGGTC---AGTAACACGCGTCTG......................................................................................................................................................................................................................................................................................2021.002200000
........GTC---AGTAACACGCGTCTGATT...................................................................................................................................................................................................................................................................................2121.002011000
.....................CGCGTCTGATTGGATCCTACCCT.......................................................................................................................................................................................................................................................................2321.002200000
........................................................................................................................................................................................................................................................C------------TATTTCGAGGATGTGTTTGCGACCAC....................2721.002110000
........................GTCTGATTGGATCCTACCCC.......................................................................................................................................................................................................................................................................2021.002020000
.................AACACGCGTCTGATTGGATCCT............................................................................................................................................................................................................................................................................2221.002010010
......................................................................................................................................................................................................................................................................ATTTCGAGGATGTGTTTGC..........................1921.002020000
............................GATTGGATCCTACCCTAGCAC----..............................................................................................................................................................................................................................................................2121.002020000
.................AACACGCGTCTGATTGGAT...............................................................................................................................................................................................................................................................................1921.002001010
.................AACACGCGTCTGATTGGA................................................................................................................................................................................................................................................................................1821.002010010
.............................ATTGGATCCTACCCTAGCAC----..............................................................................................................................................................................................................................................................2021.002110000
................TAACACGCGTCTGATTGGATCC.............................................................................................................................................................................................................................................................................2221.002020000
...................................................................................................................................................................................................................................................................................GTTTGCGACCACGCCCATTATGTCCAC.....2721.002110000
.......................CGTCTGATTGGATCCTACCCT.......................................................................................................................................................................................................................................................................2121.002020000
......................................................................................................................................................................................................................................................................ATTTCGAGGATGTGTTTGCGACCAC....................2521.002020000
..........C---AGTAACACGCGTCTGATTGGA................................................................................................................................................................................................................................................................................2221.002100010
..............AGTAACACGCGTCTGATTG..................................................................................................................................................................................................................................................................................1921.002001010
....................................CCTACCCTAGCAC----TGAAGCT.......................................................................................................................................................................................................................................................2021.002011000
......CGGTC---AGTAACACGCGTCTGATTGGATC..............................................................................................................................................................................................................................................................................2821.002010010
...................CACGCGTCTGATTGGATCCTACCCT.......................................................................................................................................................................................................................................................................2520.501010000
................................................................................................................................................................................................................................................................................TGTGTTTGCGACCACGCCCATTATGT.........2620.501100000
........................................................................................................................................................................................................................................................................................CGACCACGCCCATTATGTC........1920.501010000
............................GATTGGATCCTACCCTAGCAC----TGAAG.........................................................................................................................................................................................................................................................2620.501010000
...................................................................................................................................................................................................................................................................................GTTTGCGACCACGCCCATTATGTCC.......2520.501010000
AA--CTCGGTC---AGTAACACGCGC.........................................................................................................................................................................................................................................................................................2120.501010000
..............AGTAACACGCGTCTGATTGGATC..............................................................................................................................................................................................................................................................................2320.501000010
...................................................................................................................................................................................................................................................................................GTTTGCGACCACGCCCATTATGTC........2420.501010000
.................AACACGCGTCTGATTGGATCCTACCCTA......................................................................................................................................................................................................................................................................2820.501100000
.........................................................................................................................................................................................................................................................................................GACCACGCCCATTATGTCC.......1920.501010000
...........................................................................................................................................................................................................................................................................GAGGATGTGTTTGCGACCAC....................2020.501010000
......................GCGTCTGATTGGATCCTACCCT.......................................................................................................................................................................................................................................................................2220.501010000
...................CACGCGTCTGATTGGATCC.............................................................................................................................................................................................................................................................................1920.501010000
...............GTAACACGCGTCTGATTGGATCCTACC.........................................................................................................................................................................................................................................................................2720.501000010
........GTC---AGTAACACGCGTCTGATTGGATCC.............................................................................................................................................................................................................................................................................2720.501010000
.....................................................................................................................................................................................................................................................................TATTTCGAGGATGTGTTTGCGACCAC....................2620.501010000
.................................................................................................................................................................................................................................................................................GTGTTTGCGACCACGCCCATTATGTCC.......2720.501010000
..................ACACGCGTCTGATTGGATCCTA...........................................................................................................................................................................................................................................................................2220.501010000
.A--CTCGGTC---AGTAACACGCGT.........................................................................................................................................................................................................................................................................................2020.501010000
........GTC---AGTAACACGCGTCTGA.....................................................................................................................................................................................................................................................................................1920.501010000
....................ACGCGTCTGATTGGATCCTACCC........................................................................................................................................................................................................................................................................2320.501100000
........................GTCTGATTGGATCCTACCCTAG.....................................................................................................................................................................................................................................................................2220.501001000
............................GATTGGATCCTACCCTAGCAC----TGAAGCT.......................................................................................................................................................................................................................................................2820.501010000
........................GTCTGATTGGATCCTACCCTAGCAC----..............................................................................................................................................................................................................................................................2520.501010000
.................................................................................................................................................................................................................................................................................GTGTTTGCGACCACGCCCATTATGTC........2620.501100000
......................................................................................................................................................................................................................................................................ATTTCGAGGATGTGTTTGCGACCA.....................2420.501010000
........................GTCTGATTGGATCCTACCC........................................................................................................................................................................................................................................................................1920.501010000
...............................................................................................................................................................................................................................................................................ATGTGTTTGCGACCACGCCCATTATGTC........2820.501000100
.......................................................................................................................................................................................................................................................GC------------TATTTCGAGGATGTGTTT............................2020.501100000
................................................................................................................................................................................................................................................................................TGTGTTTGCGACCACGCCCATTAC...........2420.501010000
..........................CTGATTGGATCCTACCCTAGC....................................................................................................................................................................................................................................................................2120.501010000
......CGGTC---AGTAACACGCGTC........................................................................................................................................................................................................................................................................................1820.501010000
....................................CCTACCCTAGCAC----TGAAG.........................................................................................................................................................................................................................................................1820.501010000
..............AGTAACACGCGTCTGATTGGATCCTACCC........................................................................................................................................................................................................................................................................2920.501010000
.................AACACGCGTCTGATTGGATCCTACCC........................................................................................................................................................................................................................................................................2620.501100000
................................GGATCCTACCCTAGCAC----TGAAGCT.......................................................................................................................................................................................................................................................2420.501100000
...............GTAACACGCGTCTGATTGGAT...............................................................................................................................................................................................................................................................................2120.501010000
....................ACGCGTCTGATTGGATCCTACCCTA......................................................................................................................................................................................................................................................................2520.501100000
...............GTAACACGCGTCTGATTGGA................................................................................................................................................................................................................................................................................2020.501100000
.......GGTC---AGTAACACGCGTCTGATTGGATC..............................................................................................................................................................................................................................................................................2720.501010000
..................................ATCCTACCCTAGCAC----TGAAGC........................................................................................................................................................................................................................................................2120.501010000
..........................CTGATTGGATCCTACCCTAGCA...................................................................................................................................................................................................................................................................2220.501100000
................TAACACGCGTCTGATTGG.................................................................................................................................................................................................................................................................................1820.501001000
............................................................................................................................................................................................................................................................................................CACGCCCATTATGTCCACC....1920.501010000
...................................................................................................................................................................................................................................................................................GTTTGCGACCACGCCCATTAT...........2120.501010000
.............................................................................................................................................................................................................................................................................GGATGTGTTTGCGACCACGCC.................2120.501010000
..............AGTAACACGCGTCTGATTGGATCCTAC..........................................................................................................................................................................................................................................................................2720.501100000
........................GTCTGATTGGATCCTACCCTC......................................................................................................................................................................................................................................................................2120.501001000
................TAACACGCGTCTGATTGGATC..............................................................................................................................................................................................................................................................................2120.501010000
........................................................................................................................................................................................................................................................................TTCGAGGATGTGTTTGCGACCAC....................2320.501010000
......................................................................................................................................................................................................................................................................ATTTCGAGGATGTGTTTGT..........................1920.501001000
.......................CGTCTGATTGGATCCTACCCTA......................................................................................................................................................................................................................................................................2220.501100000
.......GGTC---AGTAACACGCGTCTGATT...................................................................................................................................................................................................................................................................................2220.501100000
..........C---AGTAACACGCGTCTGATTGG.................................................................................................................................................................................................................................................................................2120.501000010
.....................CGCGTCTGATTGGATCCTACCC........................................................................................................................................................................................................................................................................2220.501000010
...............................................................................................................................................................................................................................................................................ATGTGTTTGCGACCACGCCCATTATGT.........2720.501100000
.A--CTCGGTC---AGTAACACGCGTCT.......................................................................................................................................................................................................................................................................................2220.501010000
.................................GATCCTACCCTAGCAC----TGAAGCT.......................................................................................................................................................................................................................................................2320.501010000
..................................ATCCTACCCTAGCAC----TGAAGCTG......................................................................................................................................................................................................................................................2320.501100000
.................AACACGCGTCTGATTGGATCCTACCCT.......................................................................................................................................................................................................................................................................2720.501010000
......................................................................................................................................................................................................................................................GGC------------TATTTCGAGGATGTGTTTGCGA........................2520.501100000
..........................CTGATTGGATCCTACCCT.......................................................................................................................................................................................................................................................................1820.501010000
........................GTCTGATTGGATCCTACCCTAGCAC----T.............................................................................................................................................................................................................................................................2620.501010000
...............GTAACACGCGTCTGATTGGATCCTACCCT.......................................................................................................................................................................................................................................................................2920.501100000
.......................................................................................................................................................................................................................................................................TTTCGAGGATGTGTTTGC..........................1820.501010000
........................................................................................................................................................................................................................................................................TTCGAGGATGTGTTTGCGACCACGCC.................2620.501010000
........GTC---AGTAACACGCGTCTGATTGGATC..............................................................................................................................................................................................................................................................................2620.501010000
AA--CTCGGTC---AGTAACACGCGTCTGATT...................................................................................................................................................................................................................................................................................2720.501000010
..............AGTAACACGCGTCTGATTGGATCCT............................................................................................................................................................................................................................................................................2520.501010000
.................AACACGCGTCTGATTGGATCCTAC..........................................................................................................................................................................................................................................................................2420.501100000
..........................................................................................................................................................................................................................................................................CGAGGATGTGTTTGCGACCA.....................2020.501010000
......................................................................................................................................................................................................................................................GGC------------TATTTCGAGGATGTGTTTGCGAC.......................2620.501010000
..............................TTGGATCCTACCCTAGCAC----TGA...........................................................................................................................................................................................................................................................2220.501010000
...............GTAACACGCGTCTGATTGGAGA..............................................................................................................................................................................................................................................................................2220.501010000
.................AACACGCGTCTGATTGGATCCTACCCC.......................................................................................................................................................................................................................................................................2720.501010000
............................GATTGGATCCTACCCTAGCAC----T.............................................................................................................................................................................................................................................................2220.501100000
......................................................................................................................................................................................................................................................GGC------------TATTTCGAGGATGTGTTT............................2120.501010000
..........................................................................................................................................................................................................................................................................CGAGGATGTGTTTGCGACCACGCC.................2420.501010000
.....................................................................................................................................................................................................................................................TGGC------------TATTTCGAGGATGTGT..............................2020.501000010
..........C---AGTAACACGCGTCTGATTGGATC..............................................................................................................................................................................................................................................................................2420.501000010
...................CACGCGTCTGATTGGATCCTACCCTAGC....................................................................................................................................................................................................................................................................2820.501100000
....................ACGCGTCTGATTGGATCCTACCCT.......................................................................................................................................................................................................................................................................2420.501100000
...........................................................................................................................................................................................................................................................................GAGGATGTGTTTGCGACCACGCC.................2320.501010000
.............................ATTGGATCCTACCCTAGCAC----T.............................................................................................................................................................................................................................................................2120.501010000
......................GCGTCTGATTGGATCCTACCCC.......................................................................................................................................................................................................................................................................2220.501010000
..........C---AGTAACACGCGTCTGATTGGAC...............................................................................................................................................................................................................................................................................2320.501010000
......................................................................................................................................................................................................................................................GGC------------TATTTCGAGGATGTGT..............................1920.501010000
...................CACGCGTCTGATTGGATCCTACC.........................................................................................................................................................................................................................................................................2320.501010000
.............................ATTGGATCCTACCCTAGCAC----TGAAGCC.......................................................................................................................................................................................................................................................2720.501010000
......................................................................................................................................................................................................................................................GGC------------TATTTCGAGGATGTGTT.............................2020.501010000
..................................ATCCTACCCTAGCAC----TGAAGCTGG.....................................................................................................................................................................................................................................................2420.501010000
...............GTAACACGCGTCTGATTGGATCC.............................................................................................................................................................................................................................................................................2320.501100000
................................................................................................................................................................................................................................................................................TGTGTTTGCGACCACGCCC................1920.501010000
.....................CGCGTCTGATTGGATCCTACCCTAGC....................................................................................................................................................................................................................................................................2620.501100000
......................GCGTCTGATTGGATCCTACCCTAGCAC----T.............................................................................................................................................................................................................................................................2820.501010000
.................................................................................................................................................................................................................................................................................GTGTTTGCGACCACGCCCATT.............2120.501010000
......................................................................................................................................................................................................................................................................ATTTCGAGGATGTGTTTGCG.........................2020.501010000
....................ACGCGTCTGATTGGATCC.............................................................................................................................................................................................................................................................................1820.501010000
...........................TGATTGGATCCTACCCTAGCAC----TGA...........................................................................................................................................................................................................................................................2520.501100000
......................................................................................................................................................................................................................................................................ATTTCGAGGATGTGTTTGCGA........................2120.501100000
..................ACACGCGTCTGATTGGATCC.............................................................................................................................................................................................................................................................................2020.501010000
.......GGTC---AGTAACACGCGTCC.......................................................................................................................................................................................................................................................................................1820.501010000
......................................................................................................................................................................................................................................................................ATTTCGAGGATGTGTTTGCGACCACGCC.................2820.501010000
......................................TACCCTAGCAC----TGAAGCTGG.....................................................................................................................................................................................................................................................2040.251001000
droBip1
AA--CTCCGAC---AGCAACACCCGTCTCATTGGATCCTACCCCAGCAC----TGAAGCGTAAGTTTTGT-----AGCATC------------------------------------------T--------TCCTTCAAGTC--------AGCAACATTATC------------------------A------TTATC-CC---CATTCCG---AACAG-------------------------TGGC------------TATTTTGAGGATGTGTTTGCTACCACACCCATTATGTCTACCTACCSizeHit CountTotal NormTotal
No Reads
droKik1
AA--TACGGCC---AGTAACACGCGCTTGATTGGATCCTATCCTCATGC----CGAAGAGTAAGTTACCGTT--AG--TCC------------------------------------------CT----------TGTTT--G--------TA----------TCGCA---------TT--------A------ATTTTC-TCCT---TTGCTTTGTCAG-------------------------GGGA------------TACTATGTGGATGTGTACAAGACCACGCCTACTATGTCTACTTACASizeHit CountTotal NormTotal
No Reads
droFic1
AC--CACCGTC---TCTAACATGCCCAT---------TGTTTCCACCAACGAT----CAGTGAGTACTTAAT------------------------------TTCATTTACCA----------------ATA---AGC-------------AACACCTAAAAC------------------------A------ATTTT-CC---TAAACCG---TG--------------TAG-----------CGCCACCATATCGAGTTACGTGTGGGATCACTTTGCTGAATCCTTGCCCATGTCCACTTATCSizeHit CountTotal NormTotal
No Reads
droEle1
GTTATTCAGCCATATCCAATATGCCAGT---------CAAGGAAATATTAGCT-CATGGGTAAATAGATA--------------------------------------------------ACTTAAGCT----ATTTAAA-----------AT----------ATT-----------------TATTA------ACTTTG-A---ATTCTGT---TGCAG-------------------------TGAT------------TTAAAGACCACCTTGTTTCACACAACCCCACCAATATCCACCTATCSizeHit CountTotal NormTotal
No Reads
droRho1
AC--CGGTCTC---AGCAATATGCCCGT---------AAAGGAAACTAAAACA----CAGTAAATCATATTTTATAATT-----GAT---------------------------------------------TTAAATAG-------GATT-TCAATATTTAT----G---------TT--------G------CATTTA-TT------TTT---CG--------------CAG-----------TGAATCACTTCCCGATTACATTTGGACCGAATTTCAAGAATCATTGCCAATGTCAACTTATCSizeHit CountTotal NormTotal
No Reads
droBia1
AC--CACAGTT---TCTAATATGCCCAT---------TGTGTCCACCAACGAT----CAGTGAGTGTTGGCT----------------------------------------------TAAATATTC-------CTATAA-------CGAC-TCTGTTATAAC----G---------TA--------A------TCTTTG-TA------CTC---TA--------------TAG-----------TGCCACCATCCCCAGCTATGTGTGGGATCACTTTGCTGAATCGCTGCCCATGTCATCTTATCSizeHit CountTotal NormTotal
No Reads
droTak1
CA--TTCGGCCATATCCAATATGCCAGT---------CAAGGAAATACTGTCG-CATGGGTAAGTCGATA-------------------------------------------------AAGTTTCTCAAGATTCTAAA-------------C------------C-----------------TAATA------ACTCTT-G---CTTTCTT---CATAG-------------------------CGAA------------TTAAAAACCACCTTGTTTCAAACAACCCCACCAATTTCCACCTATCSizeHit CountTotal NormTotal
No Reads
droEug1
AA--CTCGGCC---AGTAACACCCGTCTGATCCAATCTACTCCCAGCAC----TGAGGAGTAAGTAACTCTA--AT--ATT----------------------TTGTAA-CC-TAAA---ATTAAGGCATTTATTTTTAAAAA--------AG----------TTTTAACTAACCCAAA--------ATGTTTATATTTACC---CAT---G---CTTAG-------------------------AGGT------------TATTTTACGGATGTGTACAAGACGACTCCTAAGATGTCCACCTATCSizeHit CountTotal NormTotal
No Reads
dm3
AC--CACCATA---TCCAACATGCCCAT---------TGTGTCCAGCAACGAT----CAGTGAGTATTGCCT----------------------------------------------TTGCTATCA-------AAGTAA-------TCAT-TCTATTTAAGT----G---------TA--------A------TCTTTG-AT------CTT---CT--------------TAG-----------CGCCACCATGCCAAGCTATGTGTGGGATCACTTTGCCGAATCGCTGCCCATGTCCACCTATCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................TGCCAAGCTATGTGTGGGATCACT..............................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................CACCATGCCAAGCTATGTGTGGGAT..................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TGCCAAGCTATGTGTGGGATCACTTT............................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TATGTGTGGGATCACTTTGCCGAAA.....................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TGCCAAGCTATGTGTGGGATCACTT.............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................GCCAAGCTATGTGTGGGATCACTTT............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................................................................................................................................................................................................................................................................................TCACTTTGCCGAATCGCTGCCCATG..........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGTGTGGGATCACTTTGCCGAATCGC..................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................ATGCCAAGCTATGTGTGGGATCACTTT............................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TA---TCCAACATGCCCAT---------TGTGTCCAGC....................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000
..................................................................................................................................................................................................................................................................AGCTATGTGTGGGATCACTTTG...........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.......................................................................................................................................................................................................................................................................TGTGTGGGATCACTTTGCCGAATCGCT.................2712.0020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AT---------TGTGTCCAGCAACGAT----C.........................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TGCCAAGCTATGTGTGGGATC.................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ACCATGCCAAGCTATGTGTGGGATC.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CATGCCAAGCTATGTGTGGGATCACT..............................2611.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................CAAGCTATGTGTGGGATCACT..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ACTTTGCCGAATCGCTGCCCATGTC........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GAATCGCTGCCCATGTCCACCTATC2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TTGCCGAATCGCTGCCCATGTC........2211.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TTGCCGAATCGCTGCCCATGTCCA......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AAGCTATGTGTGGGATCACTTTGC..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AAGCTATGTGTGGGATCACTT.............................2111.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................AT----CAGTGAGTATTGCCT----------------------------------------------TTGCTATCA-------AA...........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................GCCAAGCTATGTGTGGGA...................................1811.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATGCCCAT---------TGTGTCCAGCAACG................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CACTTTGCCGAATCGCTGCCC.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................ATGCCAAGCTATGTGTGGG....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AT---------TGTGTCCAGCAACGAT----CACGC.....................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................ATGCCAAGCTATGTGTGGGA...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCATA---TCCAACATGCCCAT---------TGTGTC........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CATGCCCAT---------TGTGTCCAGCAACGA...............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AACATGCCCAT---------TGTGTCCAGCAACGAT----C.........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................T---------TGTGTCCAGCAACGAT----CACGC.....................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CATA---TCCAACATGCCCAT---------TGTGTCC.......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CAACATGCCCAT---------TGTGTCCAGCA...................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TGTGGGATCACTTTGCCGAATCGC..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATA---TCCAACATGCCCAT---------TGTGTC........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TATGTGTGGGATCACTTTGCCGAATCG...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGTGTGGGATCACTTTGCC.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CCAT---------TGTGTCCAGCAACGAT----CACGC.....................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACATGCCCAT---------TGTGTCCAGC....................................................................................................................................................................................................................................................................2011.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GTGTCCAGCAACGAT----CAGTGA....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TATGTGTGGGATCACTTTGCCGAA......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CCCAT---------TGTGTCCAGCAACGAT----CACGC.....................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CACCATGCCAAGCTATGTGTG......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TTTGCCGAATCGCTGCCCATGTC........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AC--GGGTATT---AGCAACATGCCCGT---------GAAGGAAACCAAGCCA----CAGTTAGTCATCGCA----------------------------------------------TAGCTTTCAGAACTTTCCACAG--A--------AG----------CTACA---------TT--------A------ACTTTA-TT------CT----TC--------------CAG-----------TGAAACCCTCGCCGACTACATATGGTGCGAGTTCCAGGAGTCGGTGCCCATGTCCACCTACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................TGAAACCCTCGCCGACTACATATGG.....................................2511.00100000010000000000
......................................................................................................................................................................................................................................................................ACATATGGTGCGAGTTCCAGGAGTCGG..................2720.50100000001000000000
................CAACATGCCCGT---------GAAGGA........................................................................................................................................................................................................................................................................1820.50100000010000000000
droSec2
AC--GGGTATA---AGCAACATGCCCGT---------GAAGGAAACCAAGCCA----CAGTAAGTCATCGCG----------------------------------------------TAACTTTCAGAACTTTCCACAG--A--------AG----------CTACA---------TT--------A------ACTTTA-TT------CT----TC--------------CAG-----------TGAAACCCTCGCCGACTACATATGGTGCGAGTTCCAGGAGTCGGTGCCCATGTCCACCTACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......GTATA---AGCAACATGCCCGT---------GAAGGA........................................................................................................................................................................................................................................................................2511.0010100
droYak3
AC--CGGAGTC---AGTAATATGCCTGT---------AAAGGAAACCAAGCCA----CAGTACATTTTACTC----------------------------------------------TAGGTTTGC-------TCTTAA------------ACTGTGATAAA----T---------TA----------------------------------------GTGACTACTTTTCAG-----------TGAATCCCTTACCGATTACGTATGTACCGAGTTCCAGGAGTCGTTGCCAATCTCCACCTATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AT--A---------TCCAATATGCCAGT---------TAAGGAAGTACTTTCT-CATGGGTAAGTGTATAAT------------------------------TATATAT-CTC-A---GGCCTTATTAAACTCTTC------------------------------------------------------------------------------------------------TGTGTATTTTCAGTGAC------------TTGAAGACCACCTCATTTCACACAACACCACCGATTTCAACCTACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/16/2015 at 08:47 PM