ID:

dvi_16123

 Coordinate:

scaffold_13047:9259065-9259215 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.5 -27.1 -27.1

Flybase annnotation

exon [dvir_GLEANR_8471:1]; CDS [Dvir\GJ23111-cds]; intron [Dvir\GJ23111-in]

No Repeatable elements found

Sense Strand Reads

--################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAATGGCTGATTTAAATGACTCCAATGGAAACTACGACGACAATGATGAGGTGAGCGAAATGTGTGTAATATATGTAGTTGCATGTACAAGTGCCGACGCCGACATATTTAAAATGGTAAAACGCATTTATAATTTTGCTATAAGTGTGCTTTAAATACGTTTTATTCGCCAATGCCCGATTAATACAGGACAAATGATGACAGGAATGAATGTCGTGCCGGTTGCCCTAATTTCAGAAAACAAATAAAAA
**************************************************(((((.(((((((((.....((((((.(((((((......))).))))....)))))).........((((.((((((((((.......)))))))))).)))).))))))))).)))))...((.((..........)).))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 SRR060659
Argentina_testes_total
 GSM1528803
follicle cells		 M061
embryo
 SRR060658
140_ovaries_total
 V047
embryo
 SRR060677
Argx9_ovaries_total
 V053
head
 M027
male body		 M047
female body
 SRR060661
160x9_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR1106721
embryo_10-12h
 V116
male body		 SRR060684
140x9_0-2h_embryos_total
 SRR1106726
embryo_14-16h
 SRR1106729
mixed whole adult body
 SRR060666
160_males_carcasses_total
....................TCCAATGGAAACTACGACGACAATGA............................................................................................................................................................................................................. 26 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................AATGGAAACTACGACGACA................................................................................................................................................................................................................. 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ATGACTCCAATGGAAACTACGACGAC.................................................................................................................................................................................................................. 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AACTACGACGACAATGATGAGC........................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................GGAAACTACGACGACAATGATGAG......................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..ATGGCTGATAGAAATGACT...................................................................................................................................................................................................................................... 19 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.AATGGCTGATTTAAATGACTC..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CCAATGGAAACTACGACGACAATGA............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................ACAATGATGGGGTGAGCCAAA............................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................AATGATGAGGTGAGCGAAAT.............................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TTTAAATGACTCCAATGGAAACTACGAC..................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TTAAATGACTCCAATGGAA............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................AATGGAAACTACGACGACAATGATG........................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................AACTACGACGACAATGATGA.......................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TACGTTTTATTCGCCAATGCCCGATTAA................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TCCAATGGAAACTACGACGA................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GACAAGAATGAATGTCGTGCCGG............................. 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....GGCTGATTTAAATGACTC..................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................GAAACTACGACGACAATGATGAGCA....................................................................................................................................................................................................... 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................CTACGACGACAATGATGAG......................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CTCCAATGGAAACTACGACGACAAT............................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................AGGTGAGCGAAATGTGTG......................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................CGATTAATACAGGACAAAT....................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................ACGACGACAATGATGAGC........................................................................................................................................................................................................ 18 1 8 0.25 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0
........................................................................................................................................TGCTATAGGTGTGGATTAAA............................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CATATTTAAAAGGGTA.................................................................................................................................... 16 1 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................AGACTACCACGAGAATGAT............................................................................................................................................................................................................ 19 3 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CGTGCCCACGCCGACGTAT............................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ACTCCAATGGACAGCACGA...................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TTTACCGACTAAATTTACTGAGGTTACCTTTGATGCTGCTGTTACTACTCCACTCGCTTTACACACATTATATACATCAACGTACATGTTCACGGCTGCGGCTGTATAAATTTTACCATTTTGCGTAAATATTAAAACGATATTCACACGAAATTTATGCAAAATAAGCGGTTACGGGCTAATTATGTCCTGTTTACTACTGTCCTTACTTACAGCACGGCCAACGGGATTAAAGTCTTTTGTTTATTTTT
**************************************************(((((.(((((((((.....((((((.(((((((......))).))))....)))))).........((((.((((((((((.......)))))))))).)))).))))))))).)))))...((.((..........)).))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060681
Argx9_testes_total
 SRR060663
160_0-2h_embryos_total
 V053
head
 SRR060670
9_testes_total
 SRR060655
9x160_testes_total
 V116
male body
.................CTGAGGTTACCTTTGATGCTG..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
...ATCGACTAAATTTAGTGACGTT.................................................................................................................................................................................................................................. 22 3 2 0.50 1 0 1 0 0 0 0
........................................................................................................................................................................CTGTTACGGGCTAAGTAT................................................................. 18 2 7 0.43 3 0 0 0 2 1 0
...............................................................................................................................................................................................GTTTACCACTGTCCTTTCTTC....................................... 21 3 3 0.33 1 0 0 1 0 0 0
..............................TGATGCTGCCATTACTAG........................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:9259015-9259265 - dvi_16123 A------AATGGCTGATTTAAATGACTCCAATGGAAACTACGACGACAATGATGAGGTGAGCGA------AATG-TGT-GT--------------------AA---T-AT---------ATGTAGTT--GCATG------TAC-AAGTGCCGACGCCGACATATT-T---------A--------AAAT-----G----------GTAAAACGCATTTATAATTTTGC-------------TATAAG-------TGTGC--------TT---TAAATACGTT--------T-TATTCGCCAATGCC---CGATTAA-----------------------------------------------------------------------------------------------------------T----------ACAGGACAAATGAT--------------GACAG-GAATGAATGTCGTGCCGGTTGCCCTA--------ATT--TC--AGAAAACAAATAAAAA
droMoj3 scaffold_6540:31374696-31374940 + A------AATGGCTGATTTAAACGATTCAAATGGAAACTACGACGACAATGATGAGGTGAGCGT------AATG-TTT-AT-----------------------TATC--------------AATTC--GCATG------CAAAAAATGCCGATGCCGACACATT-G---------A--------AGAA-----ATATG---AAAATGGCAT----TTCGAATTTTGC-------------TGTGTA-------TGTGC-------ATTTGC----AACGTAATATTCTCTATATTCGAATTGA-----------------------------------------------------------------------------------------------------------------------A----------GAAGGCTAAATAAA--------------GAAAACAAATTAAAAACTTTCCGGTTGCCTTA--------CTGT-TTTAT-----TT-----TAT
droGri2 scaffold_14906:3986739-3987018 + C------AATGGCTGATCTAAACGATTCCAATGGAAATTACGACGATAACGACGAGGTGAGCGT------AATA-ATATTGTGTTTA-----------------------T------------TTTC--GCATA------ACTAAAATGCCGACGCCGACATATT-G---------A--------AAGT-----TAACGAATAAATTAATAT-----TTTTTTTTTAC-------------CGTAAA-------TGTTG--------AT---TAACTACGTT--------TC-GATTGA-----------------TG---CTACCAAT-TTAACTTGATATA-ATATAATAAAGTAGAATTTATACC---AT-ATATCGGCAACATTCGCA----------------------AAGC-----A----------AAAGAGTAA---------------------------------------------------G-----TAAAA--TA--ATAAAACAAAGAAAAA
droWil2 scf2_1100000004943:6570148-6570498 - A------AATGGCGGATATCAACGATTCCAATGGAAACTACGATGACAACGATGAGGTAAGTTAA------AGA-ACTA--ATTTATTTTTTCGCTCTCTTAA---T-TTTTCACATACATACATAC--ACGTCAA-------AAAGTGCCGATGCCGACATGAC-TGACATATTGCAAATTTTTCATCCATATG-------AATATAGAGAGGGGGT----------------------------------------------------------TGAAC--------TTTTGTTTAAATTGTTGT--GCATTAATGAGGCTTCCAAG-TA---TAAATGTAC----------ATATATTATATATA---TT-GGGTCAGCGACTTGGGCATTTTTCGAATTTCTTGTTCGACAAATA--AAGG----------CAAACAAGCCGAAGCCGGT-ATAAGGG--------------------------------A----T-GGAG--GA--AGAAAAGAGAGAAAAA
dp5 2:16926771-16926871 - C------TATGGCAGACTTAAACGACTCCAACGGCAACTACGACGACAACGATGAGGTAAGCGC------AGGA-TTGC--------------------GAAG---T-TTT------------TATC--GTGAG---------CAAATGTCAATGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_0:3463047-3463147 + C------TATGGCAGACTTAAACGACTCCAACGGCAACTACGACGACAACGCTGAGGTAAGCGC------AGGA-TTGC--------------------GAAG---T-TTT------------TATC--GT--G--A-----AAAAATATCAATGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:2034643-2034772 - ATACTATAATGGCTGATATAAACGACTCCAACGGAAACTACGACGACTGCGATGAGGTAAGCAC------AATG-ATT-CCAATTATTT---------CTAAA---T-TAT------------TTTC--GCCAATAAATACGTG-TTCGCCGACGCCGACAGTTT-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396712:2297811-2297951 + A-------ATGGCTGATATTAACGACTCCAACGGAAACTACGACGATTGCGACGAGGTGAGTACC------ATA-ATT-GCAATTATTT------T--GTAAG---T-TAT------------TTTT--GC----TGATACGTGTTTTGCCGACGCCGACAGATTTT---------G--------CAC----------------CTTAGCACGCGGTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302392:315385-315698 + A-------ATGGCGGATTTGAACGACTCCAATGGAAACTATGACGACTGCGACGAGGTGAGTTTT------GTT-TTTG--------------------TCGG---C-TTTTCGCGG------GGAG--GGGCGGGCGA-CGGAAAATGTCGACGCCGACAATTT-C---------G--------CACC-----G-------AAATTAGCATGCGGCGTTTTCT---C----TGACGG-----------GAATAAGT------G-CAATTGC--CGGGGGTC-TTCGATCTCGATTCGGGCTCCTCCGGCGGCCAATGACACGGCAAAAGT----TGAAGG--------------------------CCCT-TTTT-TCGCCAG--------------------------------ACA--AATACAATTGAT-TTG-AGCGAATGAAACCGGCTACAAGCC--------------------------------G----TTAATA--CA--AGGAAAAAGAAAAAAA
droFic1 scf7180000453906:11379-11661 + A-------ATGGCAGATTTAAACGACTCCAATGGAAACTACGATGATGGCGATGAGGTGAGTTAA------CAA---------------------------------------------AAGAAACTATGT--------ATGCAAAATGTCGACGCCGACAAAAT-T---------G--------CA-----------------------ACGCGGCTTTTTC-G--G----TGACAA---------TTGAATAGGT------G-CGATTAA---GTGGACC-ATTCATCTTTGTTGGCATTCAGC---CGGTTAATGACACCTCACAAGT----TTGATGA-------------------------CCCT-TTTT-CGGTGAA--------------------------------TTATGTTTATAATCAAT-TAACAAAAGACGATACCGGCT---------------------------------------GTGCATTAATA--AAAAAAAAAACG--AAACAA
droEle1 scf7180000491047:1709330-1709640 + --------ATGGCGGATCTTAACGACTCTAATGGAAACTACGACGACGGTGACGAGGTGAGTTAT------TTATTCGTTGAAAT--TC------------TTTAGC----------------AAAC--GCACGAGAAAGTGCAAAATGTCGACGCCGAAAGAAT-T---------G--------CAAG-------------AATATAACACGCGGCTTTTTTTTTAC-------TTATGATGT--GTA-----C--ACATTTG-GGATTGT---CTGAGTC-TTTGC-----TTGTGGATTGATC---GGGTTAATGACACTGCAAAAGT----TTGATGG-------------------------CCCT-TGTC-TCGGAAA-------------------------------------CATGTAATTGAATAAAAAAAAAACGATACCGGCT---------------------------------------GCTCACCG---AAAAAGAGAGAACGAAGACACA
droRho1 scf7180000777292:4168-4468 - --------ATGGCGGATCTGAACGACTCCAATGGAAACTACGACGATGGTGATGAGGTAAGTTAA------TATATCGC--GAA-AGTT-----------CAA-TATC--------------CAAAC--GCGTGGGAAAGTGCA-AATGTCGACGCCGACAAATT-G---------G--------CAAT-----G-------A-ATTAACACGCGGCTTTTTT-GTAC--------AA-TATGT--GTA-----T--TCATATGTGTAT---TAAATAGGT--------CTTTGTTCGGATTCAGC---GGGTTAATGACACTGCAAAAGT----TTGATGG-------------------------CCCT-TTTC-TCGCAAA-------------------------------------CATGTAATTGAT-TAAAAAAAAAAGATACCGGCT---------------------------------------GTCCACCG---A-AAAAAGAGAACG----AAAA
droBia1 scf7180000302402:2218725-2219028 - A-------ATGGCGGATCTCAACGACTCCAACGGAAACTACGACGATGGTGACGAGGTGAGTTGT------CGAGCTGC--GCTTTCTG------------GTTCGC----------------CAAC--GCGTGGGAAAGTGCAAATTGTCGACGCCGACAAATT-C---------G--------CAGG-----T-------AACTCGGCACGCGGCTTTTTTCG--C----TG-----GCTG-------------T------G-GAATTGT---ACAGGTC-TTCGCTCTTTGTCCGAATTCAAC---CGGTTATTGACTCGGCGCCGGT----TTAATGC-------------------------CCCC-TTTT-TGGGAAA--------------------------------ATATACGCATAATTGTG-AGGAAAAACGCGTTGCCGGCC---------------------------------------GC----CG---AAAAAAAGAGAGCGAACACACA
droTak1 scf7180000415380:288534-288842 - A----ATCATGGCGGATCTGAACGACTCCAATGGAAACTACGACGATGGCGACGAGGTGAGTGGTTGTTAAACA-ACGC--ACTTTTTT-----------C-TATGT----------------CAAC--GCGTGGGAAAGTGCAAAATGTCGACGCCGACAAAATTT---------G--------CAAC-----G---------CTCAGCACGCGGCTTTTTTCG--C----TG-----GGTG----TAA----AGTAC--------TT---TAAGCAGGTC----------TGTCCGAATTCAAC---CGGTTATTGACACTGCTTGAGT----TAAATGGAG-----------------------CCCCAT-TTTGGGGCAACA------------------------------ATATATACATAATTGTT-AAAGAAAAAACGATACCGGCT---------------------------------------GTCTAACG---------AGAAAAAAAATTAAGA
droEug1 scf7180000405137:898-1214 + A----ATAATGGCGGATCTGAACGATTCCAATGGAAACTACGACGATGGTGACGAGGTGAGTTT------AATG-AGA-TTAATTTCC------------A-A----------------ATGTAATC--GCGTGGAAAAGTGCAAAATGTCGACGCCGACAATTTTT---------G--------CAGA-----G-------AATGTAGCACGCGGCTTTTTTTT--CTCGGC--CAA---------TTAAGTACGT------G-GAATTAA---ACAGGTC-TTCGGTCTTTATTCGCTTTCAAC---CGGTTAATGGCACTAAAAAAGT----TTAATAA-------------------------CCCT-TATC-GGGGAAA--------------------------------ACGTATGTATAATTATT-ACAAAAAAAAAATTGCCGGCC---------------------------------------GCCTTTCA--GG-AAAAAGAAAACG-----AAA
dm3 chr3R:9485987-9486110 - A-------ATGGCGGAACAAAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTTGC------AGA-ATGACCAATTGCTG------TTTGTAAA---T-CGTT-----------CATC--GCGCGTGAAAGTGCAAAATGTCGACGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:11692709-11692813 + G----AGAATGGCGGAACAGAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTTGC------AGA-ATGA---------------------------A----------------CATC--GCGCGTGAAAGTGTAAAATGTTGACGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_0:12520759-12520863 + G----AGAATGGCGGAACAAAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTTGC------AGA-ATGA---------------------------C----------------CATC--GCGCGTGAAAGTGTAAAATGTTGACGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3R:13795053-13795169 - --------ATGGCGGATATTAACGACTCCAACGGAAACTACGACGATGGCGACGAGGTGAGTGAC------AAA-ATGTTCAATTACTT------TT-----TGTGC----------------CAGC--GCGTGGGAAAGTGCAAAATGTCGACGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4770:12149485-12149600 + --------ATGGCGGATCTGAACGACTCCAACGGAAACTACGACGATGGTGACGAGGTGAGTGGC------AAA-ATGTTCAATTACTT------C------TTGGC----------------CAGT--GCATAGAAAAGTGCAAAATGTCGACGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
A------AATGGCTGATTTAAATGACTCCAATGGAAACTACGACGACAATGATGAGGTGAGCGA------AATG-TGT-GT--------------------AA---T-AT---------ATGTAGTT--GCATG------TAC-AAGTGCCGACGCCGACATATT-T---------A--------AAAT-----G----------GTAAAACGCATTTATAATTTTGC-------------TATAAG-------TGTGC--------TT---TAAATACGTT--------T-TATTCGCCAATGCC---CGATTAA-----------------------------------------------------------------------------------------------------------T----------ACAGGACAAATGAT--------------GACAG-GAATGAATGTCGTGCCGGTTGCCCTA--------ATT--TC--AGAAAACAAATAAAAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................TCCAATGGAAACTACGACGACAATGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000000000000110000000000000000000000000000000000
.............................AATGGAAACTACGACGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000200000000000000000000000000000000000000000000000000000
.....................ATGACTCCAATGGAAACTACGACGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000002
...................................AACTACGACGACAATGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
................................GGAAACTACGACGACAATGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
.......AATGGCTGATTTAAATGACTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...........................CCAATGGAAACTACGACGACAATGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
...............................................AATGATGAGGTGAGCGA------AAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
................TTTAAATGACTCCAATGGAAACTACGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
.................TTAAATGACTCCAATGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000001000000000000000000000000000
.............................AATGGAAACTACGACGACAATGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000001000000000000000000000000000000000000000000000000000
...................................AACTACGACGACAATGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TACGTT--------T-TATTCGCCAATGCC---CGATTAA-----------------------------------------------------------------------------------------------------------........................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
..........................TCCAATGGAAACTACGACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
..........GGCTGATTTAAATGACTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
.................................GAAACTACGACGACAATGATGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000001000000000000000000000000000000000000000000000000000000
.....................................CTACGACGACAATGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
.........................CTCCAATGGAAACTACGACGACAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
......................................................AGGTGAGCGA------AATG-TGT-G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................CGATTAA-----------------------------------------------------------------------------------------------------------T----------ACAGGACAAAT..................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.......................................ACGACGACAATGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.252000000000000000000000000000000000010000000000000000000100000000
droMoj3
A------AATGGCTGATTTAAACGATTCAAATGGAAACTACGACGACAATGATGAGGTGAGCGT------AATG-TTT-AT-----------------------TATC--------------AATTC--GCATG------CAAAAAATGCCGATGCCGACACATT-G---------A--------AGAA-----ATATG---AAAATGGCAT----TTCGAATTTTGC-------------TGTGTA-------TGTGC-------ATTTGC----AACGTAATATTCTCTATATTCGAATTGA-----------------------------------------------------------------------------------------------------------------------A----------GAAGGCTAAATAAA--------------GAAAACAAATTAAAAACTTTCCGGTTGCCTTA--------CTGT-TTTAT-----TT-----TATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................GGAAACTACGACGACAATGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
................................GGAAACTACGACGACAATGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................................GGAAACTACGACGACAATGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................AAACGATTCAAATGGAAACTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................GATTCAAATGGAAACTACGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............TGATTTAAACGATTCAAATGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................ATTCAAATGGAAACTACGACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................................TACGACGACAATGATGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331100000
droGri2
C------AATGGCTGATCTAAACGATTCCAATGGAAATTACGACGATAACGACGAGGTGAGCGT------AATA-ATATTGTGTTTA-----------------------T------------TTTC--GCATA------ACTAAAATGCCGACGCCGACATATT-G---------A--------AAGT-----TAACGAATAAATTAATAT-----TTTTTTTTTAC-------------CGTAAA-------TGTTG--------AT---TAACTACGTT--------TC-GATTGA-----------------TG---CTACCAAT-TTAACTTGATATA-ATATAATAAAGTAGAATTTATACC---AT-ATATCGGCAACATTCGCA----------------------AAGC-----A----------AAAGAGTAA---------------------------------------------------G-----TAAAA--TA--ATAAAACAAAGAAAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
A------AATGGCGGATATCAACGATTCCAATGGAAACTACGATGACAACGATGAGGTAAGTTAA------AGA-ACTA--ATTTATTTTTTCGCTCTCTTAA---T-TTTTCACATACATACATAC--ACGTCAA-------AAAGTGCCGATGCCGACATGAC-TGACATATTGCAAATTTTTCATCCATATG-------AATATAGAGAGGGGGT----------------------------------------------------------TGAAC--------TTTTGTTTAAATTGTTGT--GCATTAATGAGGCTTCCAAG-TA---TAAATGTAC----------ATATATTATATATA---TT-GGGTCAGCGACTTGGGCATTTTTCGAATTTCTTGTTCGACAAATA--AAGG----------CAAACAAGCCGAAGCCGGT-ATAAGGG--------------------------------A----T-GGAG--GA--AGAAAAGAGAGAAAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................CTACGATGACAACGATGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300210
...................................AACTACGATGACAACGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200020
.....................................CTACGATGACAACGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....................................ACTACGATGACAACGATGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.................................GAAACTACGATGACAACGATGAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100001
................TATCAACGATTCCAATGGAAACTACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGG--------------------------------A----T-GGAG--GA--AGA.............1811.00100010
...........................CCAATGGAAACTACGATGACAACGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
......................CGATTCCAATGGAAACTACGATGACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
..............GATATCAACGATTCCAATGGAAACTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.......................................................................................................................................................................................................................................................................................................TTAAATTGTTGT--GCATTAATG.................................................................................................................................................................................................................2111.00100010
...................................AACTACGATGACAACGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
............................CAATGGAAACTACGATGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.............................................................................................................................AC--ACGTCAA-------AAAGTGCCGATGCC..................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
........................ATTCCAATGGAAACTACGATGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...................................AACTACGATGACAACGATGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
................................GGAAACTACGATGACAACGATGAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
dp5
C------TATGGCAGACTTAAACGACTCCAACGGCAACTACGACGACAACGATGAGGTAAGCGC------AGGA-TTGC--------------------GAAG---T-TTT------------TATC--GTGAG---------CAAATGTCAATGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........GCAGACTTAAACGACTCCAACGGCAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000001
....................AACGACTCCAACGGCAACTACGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000000
.............AGACTTAAACGACTCCAACGGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
...............ACTTAAACGACTCCAACGGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
C------TATGGCAGACTTAAACGACTCCAACGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
.............AGACTTAAACGACTCCAACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000001
......................................TACGACGACAACGATGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000100000
droPer2
C------TATGGCAGACTTAAACGACTCCAACGGCAACTACGACGACAACGCTGAGGTAAGCGC------AGGA-TTGC--------------------GAAG---T-TTT------------TATC--GT--G--A-----AAAAATATCAATGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............GACTTAAACGACTCCAACGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003210000
............CAGACTTAAACGACTCCAACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
........................ACTCCAACGGCAACTACGACGACAACGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........TGGCAGACTTAAACGACTCCAACGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
............CAGACTTAAACGACTCCAACGGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droAna3
ATACTATAATGGCTGATATAAACGACTCCAACGGAAACTACGACGACTGCGATGAGGTAAGCAC------AATG-ATT-CCAATTATTT---------CTAAA---T-TAT------------TTTC--GCCAATAAATACGTG-TTCGCCGACGCCGACAGTTT-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................AACGACTCCAACGGAAACTACGACGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................CTCCAACGGAAACTACGACGACTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
........................ACTCCAACGGAAACTACGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
............................CAACGGAAACTACGACGACTGCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....................AACGACTCCAACGGAAACTACGACGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...................................AACTACGACGACTGCGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
A-------ATGGCTGATATTAACGACTCCAACGGAAACTACGACGATTGCGACGAGGTGAGTACC------ATA-ATT-GCAATTATTT------T--GTAAG---T-TAT------------TTTT--GC----TGATACGTGTTTTGCCGACGCCGACAGATTTT---------G--------CAC----------------CTTAGCACGCGGTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
A-------ATGGCGGATTTGAACGACTCCAATGGAAACTATGACGACTGCGACGAGGTGAGTTTT------GTT-TTTG--------------------TCGG---C-TTTTCGCGG------GGAG--GGGCGGGCGA-CGGAAAATGTCGACGCCGACAATTT-C---------G--------CACC-----G-------AAATTAGCATGCGGCGTTTTCT---C----TGACGG-----------GAATAAGT------G-CAATTGC--CGGGGGTC-TTCGATCTCGATTCGGGCTCCTCCGGCGGCCAATGACACGGCAAAAGT----TGAAGG--------------------------CCCT-TTTT-TCGCCAG--------------------------------ACA--AATACAATTGAT-TTG-AGCGAATGAAACCGGCTACAAGCC--------------------------------G----TTAATA--CA--AGGAAAAAGAAAAAAASizeHit CountTotal NormTotal
No Reads
droFic1
A-------ATGGCAGATTTAAACGACTCCAATGGAAACTACGATGATGGCGATGAGGTGAGTTAA------CAA---------------------------------------------AAGAAACTATGT--------ATGCAAAATGTCGACGCCGACAAAAT-T---------G--------CA-----------------------ACGCGGCTTTTTC-G--G----TGACAA---------TTGAATAGGT------G-CGATTAA---GTGGACC-ATTCATCTTTGTTGGCATTCAGC---CGGTTAATGACACCTCACAAGT----TTGATGA-------------------------CCCT-TTTT-CGGTGAA--------------------------------TTATGTTTATAATCAAT-TAACAAAAGACGATACCGGCT---------------------------------------GTGCATTAATA--AAAAAAAAAACG--AAACAASizeHit CountTotal NormTotal
No Reads
droEle1
--------ATGGCGGATCTTAACGACTCTAATGGAAACTACGACGACGGTGACGAGGTGAGTTAT------TTATTCGTTGAAAT--TC------------TTTAGC----------------AAAC--GCACGAGAAAGTGCAAAATGTCGACGCCGAAAGAAT-T---------G--------CAAG-------------AATATAACACGCGGCTTTTTTTTTAC-------TTATGATGT--GTA-----C--ACATTTG-GGATTGT---CTGAGTC-TTTGC-----TTGTGGATTGATC---GGGTTAATGACACTGCAAAAGT----TTGATGG-------------------------CCCT-TGTC-TCGGAAA-------------------------------------CATGTAATTGAATAAAAAAAAAACGATACCGGCT---------------------------------------GCTCACCG---AAAAAGAGAGAACGAAGACACASizeHit CountTotal NormTotal
No Reads
droRho1
--------ATGGCGGATCTGAACGACTCCAATGGAAACTACGACGATGGTGATGAGGTAAGTTAA------TATATCGC--GAA-AGTT-----------CAA-TATC--------------CAAAC--GCGTGGGAAAGTGCA-AATGTCGACGCCGACAAATT-G---------G--------CAAT-----G-------A-ATTAACACGCGGCTTTTTT-GTAC--------AA-TATGT--GTA-----T--TCATATGTGTAT---TAAATAGGT--------CTTTGTTCGGATTCAGC---GGGTTAATGACACTGCAAAAGT----TTGATGG-------------------------CCCT-TTTC-TCGCAAA-------------------------------------CATGTAATTGAT-TAAAAAAAAAAGATACCGGCT---------------------------------------GTCCACCG---A-AAAAAGAGAACG----AAAASizeHit CountTotal NormTotal
No Reads
droBia1
A-------ATGGCGGATCTCAACGACTCCAACGGAAACTACGACGATGGTGACGAGGTGAGTTGT------CGAGCTGC--GCTTTCTG------------GTTCGC----------------CAAC--GCGTGGGAAAGTGCAAATTGTCGACGCCGACAAATT-C---------G--------CAGG-----T-------AACTCGGCACGCGGCTTTTTTCG--C----TG-----GCTG-------------T------G-GAATTGT---ACAGGTC-TTCGCTCTTTGTCCGAATTCAAC---CGGTTATTGACTCGGCGCCGGT----TTAATGC-------------------------CCCC-TTTT-TGGGAAA--------------------------------ATATACGCATAATTGTG-AGGAAAAACGCGTTGCCGGCC---------------------------------------GC----CG---AAAAAAAGAGAGCGAACACACASizeHit CountTotal NormTotal
No Reads
droTak1
A----ATCATGGCGGATCTGAACGACTCCAATGGAAACTACGACGATGGCGACGAGGTGAGTGGTTGTTAAACA-ACGC--ACTTTTTT-----------C-TATGT----------------CAAC--GCGTGGGAAAGTGCAAAATGTCGACGCCGACAAAATTT---------G--------CAAC-----G---------CTCAGCACGCGGCTTTTTTCG--C----TG-----GGTG----TAA----AGTAC--------TT---TAAGCAGGTC----------TGTCCGAATTCAAC---CGGTTATTGACACTGCTTGAGT----TAAATGGAG-----------------------CCCCAT-TTTGGGGCAACA------------------------------ATATATACATAATTGTT-AAAGAAAAAACGATACCGGCT---------------------------------------GTCTAACG---------AGAAAAAAAATTAAGASizeHit CountTotal NormTotal
No Reads
droEug1
A----ATAATGGCGGATCTGAACGATTCCAATGGAAACTACGACGATGGTGACGAGGTGAGTTT------AATG-AGA-TTAATTTCC------------A-A----------------ATGTAATC--GCGTGGAAAAGTGCAAAATGTCGACGCCGACAATTTTT---------G--------CAGA-----G-------AATGTAGCACGCGGCTTTTTTTT--CTCGGC--CAA---------TTAAGTACGT------G-GAATTAA---ACAGGTC-TTCGGTCTTTATTCGCTTTCAAC---CGGTTAATGGCACTAAAAAAGT----TTAATAA-------------------------CCCT-TATC-GGGGAAA--------------------------------ACGTATGTATAATTATT-ACAAAAAAAAAATTGCCGGCC---------------------------------------GCCTTTCA--GG-AAAAAGAAAACG-----AAASizeHit CountTotal NormTotal
No Reads
dm3
A-------ATGGCGGAACAAAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTTGC------AGA-ATGACCAATTGCTG------TTTGTAAA---T-CGTT-----------CATC--GCGCGTGAAAGTGCAAAATGTCGACGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................TACGACGATGGTGAAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..................AAAACGATTCCAACGGAAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.......................GATTCCAACGGAAACTACGACGATGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................TCCAACGGAAACTACGACGATGGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AACGGAAACTACGACGATGGTGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATTCCAACGGAAACTACGACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AACGATTCCAACGGAAACTACGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ACGATGGTGAAGAGGTGAGTTGC------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CGTT-----------CATC--GCGCGTGAAAGTG.................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATGGCGGAACAAAACGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAAACGATTCCAACGGAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000
............CGGAACAAAACGATTCCAACGGAAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CGATGGTGAAGAGGTGAGTTGC------AGA-AT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CTACGACGATGGTGAAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GGAACAAAACGATTCCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GTGAAAGTGCAAAATGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................CGATTCCAACGGAAACTACGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATGGCGGAACAAAACGATTCCAACGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AACGGAAACTACGACGATGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TGTAAA---T-CGTT-----------CATC--GCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
A-------ATGGCGGAACAAAACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................TCCAACGGAAACTACGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................TTGCTG------TTTGTAAA---T-CGTT-----------CA..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................AGA-ATGACCAATTGCTG------TT..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
............CGGAACAAAACGATTCCAACGGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AACGGAAACTACGACGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................AGA-ATGACCAATTGCTG------TTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.........................TTCCAACGGAAACTACGACGATGGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AACTACGACGATGGTGAAGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACGATTCCAACGGAAACTACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATTCCAACGGAAACTACGACGATGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................AAGAGGTGAGTTGC------AGA-A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................TCCAACGGAAACTACGACGATGGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ACGACGATGGTGAAGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............AACAAAACGATTCCAACGGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AAACGATTCCAACGGAAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................CCAACGGAAACTACGACGATGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATGGCGGAACAAAACGATTCCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGGAACAAAACGATTCCAACGGAAACTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GTGCAAAATGTCGACGCC..................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
................................................................C------AGA-ATGACCAATTGCTG------................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..................AAAACGATTCCAACGGAAACTACGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................C--GCGCGTGAAAGTGCAAAATGTCGACGC...................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
............CGGAACAAAACGATTCCAACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AACTACGACGATGGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAAACGATTCCAACGGAAACTACGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CAACGGAAACTACGACGATGGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGGAAACTACGACGATGGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................AAAACGATTCCAACGGAAACTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGGAACAAAACGATTCCAACGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TAAA---T-CGTT-----------CATC--GCGCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATTCCAACGGAAACTACGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ACGACGATGGTGAAGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
droSim2
G----AGAATGGCGGAACAGAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTTGC------AGA-ATGA---------------------------A----------------CATC--GCGCGTGAAAGTGTAAAATGTTGACGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................TTCCAACGGAAACTACGACGATGGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.00400000020010100000
..........................TCCAACGGAAACTACGACGATGGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00400000040000000000
................................GGAAACTACGACGATGGTGAAGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000011000000000
...........................CCAACGGAAACTACGACGATGGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
..........................TCCAACGGAAACTACGACGATGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
...................................................AAGAGGTGAGTTGC------AGA-ATGG---------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
............................CAACGGAAACTACGACGATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
....................AACGATTCCAACGGAAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
....................AACGATTCCAACGGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000100000000
...........................CCAACGGAAACTACGACGATGGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
..........................TCCAACGGAAACTACGACGATGGTGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
........ATGGCGGAACAGAACGATTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.........................TTCCAACGGAAACTACGACGATGGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..........................TCCAACGGAAACTACGACGATGGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.....................ACGATTCCAACGGAAACTACGACGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
droSec2
G----AGAATGGCGGAACAAAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTTGC------AGA-ATGA---------------------------C----------------CATC--GCGCGTGAAAGTGTAAAATGTTGACGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................ACTACGACGATGGTGAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..........GGCGGAACAAAACGATTCCAACGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
............................CAACGGAAACTACGACGATGGTGAAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
droYak3
--------ATGGCGGATATTAACGACTCCAACGGAAACTACGACGATGGCGACGAGGTGAGTGAC------AAA-ATGTTCAATTACTT------TT-----TGTGC----------------CAGC--GCGTGGGAAAGTGCAAAATGTCGACGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................CAACGGAAACTACGACGATGGCGACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.....................................CTACGACGATGGCGACGAGGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.......................GACTCCAACGGAAACTACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
..............GATATTAACGACTCCAACGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEre2
--------ATGGCGGATCTGAACGACTCCAACGGAAACTACGACGATGGTGACGAGGTGAGTGGC------AAA-ATGTTCAATTACTT------C------TTGGC----------------CAGT--GCATAGAAAAGTGCAAAATGTCGACGCCGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................TGAACGACTCCAACGGAAACTACGACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2815.0050000005
............................CAACGGAAACTACGACGATGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.........TGGCGGATCTGAACGACTCCAACGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001
.......................GACTCCAACGGAAACTACGACGATGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
...........................CCAACGGAAACTACGACGATGGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
....................AACGACTCCAACGGAAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.................CTGAACGACTCCAACGGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100

Generated: 05/19/2015 at 07:48 PM