ID:

dvi_16114

 Coordinate:

scaffold_13047:9236494-9236644 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_8473:7]; CDS [Dvir\GJ23113-cds]; intron [Dvir\GJ23113-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACTGAACATTTTTTATCCTTAGATTTGGTCAAAATTTTCATCAGTCGCTTGAATCGTTTGGCGTTGTAGTAAATCCTTAAAAAAAAAAAAAACCAAAAACAATAAAAAATGAGATAAATTTCCCAGCAGCTGTGCATGCTTTTACATACATTCCATTTGCTAATTGAAGTCCTAATCTCTCATGTTCATCTCTTAAAACAGGCGGCGGCGGCGGCGGATTTAATGGTGGCAAACAACGCGGCACTGGACGC
**************************************************...((((((...(((((...............................)))))...))))))............((.((.((.(((((............(((.(((....))).)))............))))).)).))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 SRR060686
Argx9_0-2h_embryos_total
 SRR060681
Argx9_testes_total
 M027
male body		 SRR060661
160x9_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 SRR060683
160_testes_total
 SRR060679
140x9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 M047
female body
 SRR060666
160_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
 M061
embryo
 SRR060667
160_females_carcasses_total
 GSM1528803
follicle cells		 SRR060654
160x9_ovaries_total
 SRR060670
9_testes_total
.............................................................................................................................................................................................................CGGCGGCGGCGGATTTAAT........................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................AAACAACGCGGCACTGGACG. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................TTTTCATCAGTCGCTTGAATCGTT................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TGAGATAATTTTTCCAGCTGCT........................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GGCGGATTTAATGGTGGC..................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................AATCCTTCAAAAAAAAAAAA................................................................................................................................................................ 20 1 8 1.00 8 0 1 1 0 0 0 0 0 2 0 0 0 2 1 0 1 0 0 0 0
..........................................................................................................................................................................................................................TTTAATGGTGGCAAACAACGC............ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CGGCGGCGGATTTAATGGTGGC..................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTTTTGATCCTTAGATTT................................................................................................................................................................................................................................. 18 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TGTTTATCCGTAGATTTGGTC............................................................................................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TTTTTATCCGTAGATTTTGT.............................................................................................................................................................................................................................. 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................GTAAATTCTTAAAAAAAAAAAAA................................................................................................................................................................ 23 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................AATCCTTCAAAAAAAAAAAAA............................................................................................................................................................... 21 1 6 0.33 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................AATCCTTCAAAAAAAAAAA................................................................................................................................................................. 19 1 11 0.27 3 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................GTAAATTCTTAAAAAAAAAA................................................................................................................................................................... 20 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................ATCGTTTGGGGTTGGAGT..................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................GTAAATTCTTAAAAAAAAA.................................................................................................................................................................... 19 1 8 0.25 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
..................................................................TAGTGAATCGTTAAAAAAA...................................................................................................................................................................... 19 2 12 0.17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
................................................TTGAATCGTGTGGTGTTG......................................................................................................................................................................................... 18 2 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TTTATCCGGAGATGTGGTC............................................................................................................................................................................................................................. 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........TTTTTGATCCTTAGAT................................................................................................................................................................................................................................... 16 1 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................AACAATAAAAAATAAGATAAACG................................................................................................................................... 23 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................TACATTCCATTTGCAAGT....................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................AATCCTTCAAAAAATAAAAAA............................................................................................................................................................... 21 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TGAGATAAATTTGGCACCA........................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
........TTTTTGATCCTTAGATTTC................................................................................................................................................................................................................................ 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................TTAAAAAAATAAAAAACCA............................................................................................................................................................ 19 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TGACTTGTAAAAAATAGGAATCTAAACCAGTTTTAAAAGTAGTCAGCGAACTTAGCAAACCGCAACATCATTTAGGAATTTTTTTTTTTTTTGGTTTTTGTTATTTTTTACTCTATTTAAAGGGTCGTCGACACGTACGAAAATGTATGTAAGGTAAACGATTAACTTCAGGATTAGAGAGTACAAGTAGAGAATTTTGTCCGCCGCCGCCGCCGCCTAAATTACCACCGTTTGTTGCGCCGTGACCTGCG
**************************************************...((((((...(((((...............................)))))...))))))............((.((.((.(((((............(((.(((....))).)))............))))).)).))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060681
Argx9_testes_total
 V116
male body		 M027
male body		 SRR1106729
mixed whole adult body
.......................................................................TTAGGAATTATTTTTTTTTT................................................................................................................................................................ 20 1 4 0.25 1 1 0 0 0
.....................................................................GTTTAGGAATTATTTTTTTTTTT............................................................................................................................................................... 23 2 8 0.13 1 1 0 0 0
.......................................................................................................................................................................................................TCCGCCGTGGCTGCCGCCTA................................ 20 3 13 0.08 1 0 0 1 0
.....................................................................GTTTAGGAATTATTTTTTTTT................................................................................................................................................................. 21 2 20 0.05 1 1 0 0 0
............................................................................................................................................................................GTTTGAGAGTCCAAGTAGA............................................................ 19 3 20 0.05 1 0 1 0 0
...........................TAGTTTTAGAAGTAGTTAGC............................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 1
.....................................................................................................................................................................................TACAAGAAGAGATTGTTGTC.................................................. 20 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:9236444-9236694 - dvi_16114 ACTG----AAC-----------ATTTTT----------------------TATCC-----TTAG-ATTTGGTCAAAATTTTCAT-----CAGTCGCTTGAATCG-TTTGGCGTTGTAGTAAATC---CTTAA------A--AAAAAAAAAAACCAAAA---------ACAATA----A-AAAAT------GAGATAAATT---------------------T---CC--CAGCAGCTGTGCATGCTTTTACAT----------------------------ACATT-CCATTT--G------CTAATT----------G-A-------AGTCCTAATCTCTC----------A-TG--TTCAT---C---TCT--TAAAACAGGCGGCGGCGGC------------------GGCGGATTTAATGGTGGCAAACAACGCG------GCACTGGACGC
droMoj3 scaffold_6540:31397753-31398007 + ACTA----GTC-----------ATTGTT----------------------TATCC-----TTAG-ATTTGGTCAAAATTTTCAT-----CAGTCGCTTGAATCGCTTTGGCGTTGTAGTAAATC---CTTAA---------------------------------------------A-CCGAAA-AC-AAAG-TGAACA-----ACA---A-AT---TTTCCCCAG--CAGCAGCTGTGCATGCCAATTATA-C---------AACA--------------A--TCATTACTGA-----ATCCAATC----------G-CCAAACGTATC--------TCTAA-TCATTTTG-TATTCAATT-------TTC--TGAAACAGGCGGAGGCGGT------------------G---GCTTCAACGGTGGCAAGCAGCGCG------GCACTGGACGC
droGri2 scaffold_14906:4009835-4010123 + ACTA----GACAT-----TGT------T----------------------TATCC-----TTAG-ATTTGGTCAAAATTTTCAT-----CAGTCGCTTGAACCG-TTTGGCGTTGTAGTCCATC---CTTAAAACACAA--AAAAAAAAAAACCCAA---------CAAAATA----A-AAAAAA-AGTACGGAAGAACA-----ACA---A-TA------T---CC--TAGCAGCTGTGCATGACTTTGACA-T----TGTT--ATT----CAATTTGT--------------A-----ATTGAAAA----------G-ACTA-----------ATCTCTA---ACGTGTTC------ATCT-------TCT--TAAAACAGGCGGCGGCGGT---GGTGGCGGCGGCGGTGGTGGTTTTAATGGGGGCAAGCAGCGCG------GCACTGGACGC
droWil2 scf2_1100000004909:10278078-10278195 - TCTA----TATAT--------------------------------------GTAC-----ATAT-ATCTGGTATTTGTTATCAT-----AAGTCTTGTAAAGCA-TTCG---TAGTACTAAATAGTCTAAAA------AAAA--AAAAAAAACAAAAA---------AACAA--------------------------------------------------------------------------------------------------------------------------------AGACAACA----------A-ACCA-----------AAAT-------------------------------------------------------------------------------------------------------------------TCC
dp5 2:16901442-16901705 - CCTA----GAC-----------ATTGTT--CTATCCTTTGCGCTAT-C-CC--T---AGTCTAG-CCTTGGTCAAAATTTCTAA--A--CAGTCGCT---------------------------------------------------------TGAATCGTTTGGCGTAGTA----A-CAAAACACTCTTATAT-------------------C---CCCTTCCCGT-CAGACTTTGAGCATGTGTA------T----TGCCCGAGT----------G-----TT-AGGGCCGA-----ATGAGATG----------T-ACTA-----------ATCCCTCGA-ACCGATTC-C---TCCAT-------TTC--CACAACAGGCGGCGGCGGT------GTTGGCGGAGGCGGCAGCTTCAACGGGGGCAAGCAGCGCG------GCTCGGGACGC
droPer2 scaffold_0:3489490-3489753 + CCTA----GAC-----------ATTGTT--CTATCCTTTGCGCTAT-C-CC--T---AGTCTAG-CCTTGGTCAAAATTTCTAA--A--CAGTCGCT---------------------------------------------------------TGAATCGTTTGGCGTAGTA----A-CAAAACACTTTTATAT-------------------C---CCCTTCCCGT-CAGACTTTGAGCATGTGTA------T----TGCCCGAGT----------G-----TT-AGGGCCGA-----ATGAGATG----------T-ACTA-----------ATCCCTCGA-ACCGATTC-C---TCCAT-------TTC--CACAACAGGCGGCGGCGGT------GGTGGCGGAGGCGGCAGCTTCAACGGGGGCAAGCAGCGCG------GCTCGGGACGC
droAna3 scaffold_13340:2010730-2010995 - ATT---GTTATTT-----AGCTGTT-------------------------GTTCT-----CTAG-AGTTGGTCAAAATTTTCCCAAAAG---------------------------------------------C---A--AACACAGAAAT----TGTCGTTTGGCGTAGTTACCTACCAGATA-TCTTTAGC----CT-----CCTTTTC-TT---CTCTTC-CGTCCAGACGTTAAGCATGCCCTATTTT-GCTTTTG----ATTTTAAAAAT-----AA--T-T-----GC-----ATTTAATT----------GAACTA-----------AT--CATGT-ACATACAT-AA--AAT---TCCCTTTACTACACCATAGGCGGCGGTG------------------------GCTTCAACGGTGGAAAACAGCGTG------GCGGTGGACGC
droBip1 scf7180000396712:2320862-2321120 + GTT----ATATTT-----AGCCGTT-------------------------GTTCT-----CTAG-AGTTGGTCAAAATTTTCCCAAAGC---------------------------------------------A------A--ACACAAAA--CCTGTCGTATGGCGTAGTA-GCTACCAGATA-TCTTTAGC----CT-----CCTTTTC-TT---CTATTCCGT--CAGACGTTGAGCATGCCCTACTTT-GCTTATG----ATTTTTTAAAT-----AA--T-T-----GG-----CTCTAACT----------A-ACTA-----------ATCATTTGC-ATACATTA-----AAT---TCCCTTTAC--CATCATAGGCAGCGGTG------------------------GCTTTAACGGTGGCAAGCAGCGCG------GCGGTGGACGC
droKik1 scf7180000302392:339612-339872 + GTT-----TATTT-----TGCT-----TT-----------------------ATC-----CTAG-AGTTGGTCAAAATTTTCCCAAAAA---------------------------------------------A------A------AAAA--CAATAAGTTTGGCGTAGTT----A-CCGAAA-AATTTAGATAGTCC-----CTCCTCC-TA---CCTTTCCCG--CTGATGTTGAGCATGTCTTTCTTT-G----CGTTT--TT--TTAAAT--G-----TT----G-CAA-----ATTACAC---------ATGGATTA-----------ACTC-TTGTTAT-------TG--AACGTTTTGTTTTAA--AAAAACAGGTGGCGGCGGC------------------GGTAACTTTAACGGCGGAAAGCAGCGCGGTGGCGGCGGTGGACGC
droFic1 scf7180000453906:33944-34191 + TAT---TTTATTT-----TGCT-----ATG--------------------TCCCC-----CTAG-AATTGGTCAAAATTTTCCGAAA--AA--------------------------------------------------------GAAAT--CTAGTCGTTTGGCGTAGTT----A-AAGAAA-TCTTTGGATGTC-------C-TTCCC-CT---TTCTTCCCG--CAGACGTTGAGCATGCCTTTCTA---------CCTTTTA---TAAAT---------T-C-----GA-----ATCGAACT----------T-ACTA-----------ATGCCTTGT-AAATCTT---A--AACAT-TTG---TTT--TAAAACAGGCGGCGGTGGC------------------GGAGGTTTCAACGGCGGAAAACAGCGCG------GCGGTGGACGC
droEle1 scf7180000491047:1734812-1735081 + TCT---TTTATTT-----TGCT-----ATG----------------------CCC-----CTAG-AGTTGGCCAAAATTTTCCCTAAAT---------------------------------------------C------C--AAAGAAAT--TAAGTCGTTTGGCGTAGTT----A-AAGAAA-TCTTTAGATGCCCCCACCCCCCCACC-TT---TCCTTCCCG--CAGACGTTGAGCATGCCATTCTTT-C----TGACG-AAA--A-AAA----ACAC--T-C-----AA-----TTTTAACT----------G-ACTA-----------ATGCTTTAA-ACATTTTC-CA--ACCTT-------TTC--TGAAACAGGCGGCGGCGGT------GGTGGC------GGCGGTTTTAACGGTGGCAAGCAACGCG------GCGGTGGACGC
droRho1 scf7180000761415:4218-4492 - TGT---TTTATTT-----TGCT-----ATG---------------------CCCC-----TTAG-AGTCGGCCAAAATTTACCAAAAAC---------------------------------------------C------C--AAA-AAA--ATAAGTCGTTTGGCGTAGTT----A-AAGAAA-A-TTTAGATGCTCT-----C-CCTCC-TT---TCCTTCCCG--CAGACGTTGAGCATGCCATTCTTT-C----TGACCAACA----AAATC----AC--T-A-----GA-----ATTTAACC----------G-ACTA-----------ATGCTTTGA-ACGTTTTC-CA--ACCGT-------TTC--TGAAACAGGCGGCGGCGGCGGCGGTGGTGGCGGCGGCGGTGGTTTTAACGGCGGAAAGCAACGCG------GCGGTGGACGC
droBia1 scf7180000302402:2192545-2192789 - GCT------------------------ATG-----CC-----------CCCCCCC-----CTAG-TATTGGTCAAAATTTTCCCA-----A--------------------------------------------------------GAAATACGAAGTCGTTTGGCGTAGTT----A-CAGAAA-TCTTTAGATGCCCT---------TCCTTC---CCCTTCCCG--CAGATGTTGAGCATGACTTTCTTT-T----TGCCTGCTA----TCATA---------------CGA-----ATTCACTT----------G-ACTA-----------ATGCGTTGT-AATTTTTT-AA--AACGT-------TTC--TGTAACAGGCGGCGGCGGC------------------GGCGGTTTTAACGGTGGCAAACAGCGCGGAGG---CGGCGGACGC
droTak1 scf7180000415380:261734-261995 - GCT------------------------ATG-------------------CCCCCC-----TTAG-AATTGGTCAAAATTTTCTA--A--AA--------------------------------------------------------GAAATCTGAAGTCGTTTGGCGTAGTT----A-AAATAAATCTTTAGATGCC-------CCCCTCC-TT---CCCTTCCCG--CAGATGTTGAGCATGTGTTTCTTTAT----TGCCTGATA----TCATA---------------CGA-----ATTTAATT----------G-ACTA-----------ATGCCTTGC-AAATTTTTGTA--AACGT-------TTT--TAAAACAGGCGGCGGCGGC---GGTGGTGGCGGAGGAGGCGGTTTCAACGGTGGCAAACAGCGCGGAGG---CGGCGGACGC
droEug1 scf7180000409802:513554-513832 + GATA--ATTTTTTAGTTTTGCT-----ATC-----T---C--TCGCCCGCCCCCTTTAGTTTAGAAATTGGTCAAAATTTTTGAA-A--AA--------------------------------------------------------GAAAAATGAAGTCGTTTGGCGTAGTT----A-AAGAAA-ACTTTAGATGCCCTC----TTTCTCC-TTCCCCTCTTCCCG--CAGATGTTCAGCATGTCTTTCTTT-T--TTTGCA---TT----TAAT-------------------------ATTAATTGAAAAATAATG---TA-----AT--TAATA--------TAAATTA-TG--AACAT-------TTT--TTAAATAGGCGGCGGTGGC------------------G---GTTTTAACGGTGGCAAACAGCGTGGCGG---CGGTGGACGC
dm3 chr3R:9462201-9462487 - ACT----TTATTT-----TGCT-----ATG-----CTGTG--CTGC--CCCCCCA-----CTAG-AATTGGTCAAAATTTTCAAAAAAA---------------------------------------------TAACA--AAAAATGAAAACCGAAGTCGTTTGGCGTAGTT----A-ATGATA-TCTATAGATGAACC-----CCTCTCC-TT---TCCTACCCG--CAGATGTTGAGCATGTCTTTCTTT-T----TGCCTGATT----TAATCTGATACTCT-CGATTCGA-----ATTTAACT----------G-ACTA-----------ATGCCTTGC-ACACTTTC-CA--AACGT-------TTC--CACAACAGGCGGTGGCG------------------------GTTTTAACGGTGGCAAGCAGCGCGGAGG---CGGTGGACGC
droSim2 3r:11716873-11717164 + TTTTACTTTATTT-----TGCT-----ATG-----CTGTG--CTG---CCCCCCA-----CTAG-AATTGGTCAAAATTTCCCAAAAAA-------------------------------------------------A--AAAAAAGAAAACCCAAGTCGTTTGGCGTAGTT----A-AAGATA-TCTATAGATGAACC-----CCTCTCC-TT---TCCTACCCG--CAGATGTTGAGCATGTCTTTCTTT-T----TGCCTGATT----TAATCTGATACTCT-CGATTC--GAAGAATTTAACT----------G-ACTA-----------ATGCCTTGC-ACACTTTC-CA--AACGT-------TTC--CACAACAGGCGGCGGTGGC------------------G---GTTTTAACGGTGGCAAGCAGCGCGGAGG---CGGTGGACGC
droSec2 scaffold_0:12544712-12544974 + GC-----------------------------------------------CCCCCA-----CTAG-AATTGGTCAAAATTTACAAAGA---------------------------------------------------A--AAAAAAGAAAACCCAAGTCGTTTGGCGTAGTT----A-AAGATA-TCTATAGATGAACC-----CCTCTCC-TT---TCCTACCCG--CAGATGTTGAGCATGTCTTTCTTT-T----TGCCTGATT----TAATCTGATACTCT-CGATTC--GAAGAATTTAACT----------G-ACTA-----------ATGCCTTGC-ACACTTTC-CA--AACGT-------TTC--CACAACAGGCGGCGGTGGC------------------G---GTTTTAACGGTGGCAAGCAGCGCGGAGG---CGGTGGACGC
droYak3 3R:13771045-13771313 - ACT----TTATTT-----TGCT-----ATG-----CTGTG--------CCCCCCA-----CTAG-AATTGGTCAAAATTTCCAA--A--AA--------------------------------------------------------GAAAACCGAAGTCGTTTGGCGTAGTT----A-ATGAAA-TCTATAGATGAACC-----C-CCTCC-TA---CCCTTCCCG--CAGATGTTGAGCATGTCTTTCTTT-T----TGCCTGATA----TAATCCGATAT--T-CGATTC--G----ATTTAACC----------G-ACTA-----------ATGTCTTGC-ACACTTTC-CA--AACGT-------TTC--CAAAACAGGCGGCGGTGGC------------------G---GTTTTAACGGTGGCAAGCAGCGCGGAGG---CGGTGGACGC
droEre2 scaffold_4770:12173016-12173277 + GT-----------------------------------GTGCGCCCC-CCCCCCCA-----CTAG-AATTGGTCAAAATTTCCAAAAA--AA--------------------------------------------------------GAAAACCGAAGTCGTTTGGCGTAGTT----A-ATGAAC-TCTATAGATAAACC-----C-CTTCC-TT---CCCTTTCCG--CAGATGTTGAGCATGTCTTTCTTT-T----TGCCTGATA----TAAACCGATAC--T-CGATTC--G----ATTTAACC----------G-ACTA-----------ATGCCTTGC-ACACTTTC-CA--AACGT-------TTC--CAAAACAGGCGGCGGCGGC------------------G---GTTTTAACGGTGGCAAGCAGCGCGGAGG---CGGTGGACGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ACTG----AAC-----------ATTTTT----------------------TATCC-----TTAG-ATTTGGTCAAAATTTTCAT-----CAGTCGCTTGAATCG-TTTGGCGTTGTAGTAAATC---CTTAA------A--AAAAAAAAAAACCAAAA---------ACAATA----A-AAAAT------GAGATAAATT---------------------T---CC--CAGCAGCTGTGCATGCTTTTACAT----------------------------ACATT-CCATTT--G------CTAATT----------G-A-------AGTCCTAATCTCTC----------A-TG--TTCAT---C---TCT--TAAAACAGGCGGCGGCGGC------------------GGCGGATTTAATGGTGGCAAACAACGCG------GCACTGGACGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................CGGCGGC------------------GGCGGATTTAAT.................................1911.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAACGCG------GCACTGGACG.2011.001000000000001000000000000000000000000000000000000000000000000000
.............................................................................TTTTCAT-----CAGTCGCTTGAATCG-TT..............................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGATTTAATGGTGGC...........................1811.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATGGTGGCAAACAACGC..................2111.001000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CGGC------------------GGCGGATTTAATGGTGGC...........................2211.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
ACTA----GTC-----------ATTGTT----------------------TATCC-----TTAG-ATTTGGTCAAAATTTTCAT-----CAGTCGCTTGAATCGCTTTGGCGTTGTAGTAAATC---CTTAA---------------------------------------------A-CCGAAA-AC-AAAG-TGAACA-----ACA---A-AT---TTTCCCCAG--CAGCAGCTGTGCATGCCAATTATA-C---------AACA--------------A--TCATTACTGA-----ATCCAATC----------G-CCAAACGTATC--------TCTAA-TCATTTTG-TATTCAATT-------TTC--TGAAACAGGCGGAGGCGGT------------------G---GCTTCAACGGTGGCAAGCAGCGCG------GCACTGGACGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCAAGCAGCGCG------GC.........1811.001000001
...................................................ATCC-----TTAG-ATTTGGTCAAA.............................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
ACTA----GACAT-----TGT------T----------------------TATCC-----TTAG-ATTTGGTCAAAATTTTCAT-----CAGTCGCTTGAACCG-TTTGGCGTTGTAGTCCATC---CTTAAAACACAA--AAAAAAAAAAACCCAA---------CAAAATA----A-AAAAAA-AGTACGGAAGAACA-----ACA---A-TA------T---CC--TAGCAGCTGTGCATGACTTTGACA-T----TGTT--ATT----CAATTTGT--------------A-----ATTGAAAA----------G-ACTA-----------ATCTCTA---ACGTGTTC------ATCT-------TCT--TAAAACAGGCGGCGGCGGT---GGTGGCGGCGGCGGTGGTGGTTTTAATGGGGGCAAGCAGCGCG------GCACTGGACGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................GCGGCGGT---GGTGGCGGCGGCG...............................................2150.20110
........................................................................................................................................................................................................................................................................................................................................................................................................GT---GGTGGCGGCGGCGGTGGTGGT.......................................2350.20110
...................................................................................................................................................................................................................................................................................................................................................................................................CGGCGGT---GGTGGCGGCGGCG...............................................2060.17101
droWil2
TCTA----TATAT--------------------------------------GTAC-----ATAT-ATCTGGTATTTGTTATCAT-----AAGTCTTGTAAAGCA-TTCG---TAGTACTAAATAGTCTAAAA------AAAA--AAAAAAAACAAAAA---------AACAA--------------------------------------------------------------------------------------------------------------------------------AGACAACA----------A-ACCA-----------AAAT-------------------------------------------------------------------------------------------------------------------TCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................AAAACAAAAA---------AACAA--------------------------------------------------------------------------------------------------------------------------------AGA..........................................................................................................................................................18130.15200020
dp5
CCTA----GAC-----------ATTGTT--CTATCCTTTGCGCTAT-C-CC--T---AGTCTAG-CCTTGGTCAAAATTTCTAA--A--CAGTCGCT---------------------------------------------------------TGAATCGTTTGGCGTAGTA----A-CAAAACACTCTTATAT-------------------C---CCCTTCCCGT-CAGACTTTGAGCATGTGTA------T----TGCCCGAGT----------G-----TT-AGGGCCGA-----ATGAGATG----------T-ACTA-----------ATCCCTCGA-ACCGATTC-C---TCCAT-------TTC--CACAACAGGCGGCGGCGGT------GTTGGCGGAGGCGGCAGCTTCAACGGGGGCAAGCAGCGCG------GCTCGGGACGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCGGAGGCGGCAGCT......................................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................GT------GTTGGCGGAGGCGGCAG........................................1911.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCAGCGCG------GCTCGGGA...1911.0010000010000
droPer2
CCTA----GAC-----------ATTGTT--CTATCCTTTGCGCTAT-C-CC--T---AGTCTAG-CCTTGGTCAAAATTTCTAA--A--CAGTCGCT---------------------------------------------------------TGAATCGTTTGGCGTAGTA----A-CAAAACACTTTTATAT-------------------C---CCCTTCCCGT-CAGACTTTGAGCATGTGTA------T----TGCCCGAGT----------G-----TT-AGGGCCGA-----ATGAGATG----------T-ACTA-----------ATCCCTCGA-ACCGATTC-C---TCCAT-------TTC--CACAACAGGCGGCGGCGGT------GGTGGCGGAGGCGGCAGCTTCAACGGGGGCAAGCAGCGCG------GCTCGGGACGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................CAGTCGCT---------------------------------------------------------TGAATCGTTTGGC..................................................................................................................................................................................................................................................................................................2112.002200000
..................................................................................AA--A--CAGTCGCT---------------------------------------------------------TGAATCGTTTGGC..................................................................................................................................................................................................................................................................................................2411.001100000
droAna3
ATT---GTTATTT-----AGCTGTT-------------------------GTTCT-----CTAG-AGTTGGTCAAAATTTTCCCAAAAG---------------------------------------------C---A--AACACAGAAAT----TGTCGTTTGGCGTAGTTACCTACCAGATA-TCTTTAGC----CT-----CCTTTTC-TT---CTCTTC-CGTCCAGACGTTAAGCATGCCCTATTTT-GCTTTTG----ATTTTAAAAAT-----AA--T-T-----GC-----ATTTAATT----------GAACTA-----------AT--CATGT-ACATACAT-AA--AAT---TCCCTTTACTACACCATAGGCGGCGGTG------------------------GCTTCAACGGTGGAAAACAGCGTG------GCGGTGGACGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................GGTG------------------------GCTTCAACGGTGGAAAACAGCG...................2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACAGCGTG------GCGGTGGA...2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAGCGTG------GCGGTGGAC..2011.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGTGGAAAACAGCGTG------GCGGTG.....2511.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAAAACAGCGTG------GCGG.......1911.001100000
droBip1
GTT----ATATTT-----AGCCGTT-------------------------GTTCT-----CTAG-AGTTGGTCAAAATTTTCCCAAAGC---------------------------------------------A------A--ACACAAAA--CCTGTCGTATGGCGTAGTA-GCTACCAGATA-TCTTTAGC----CT-----CCTTTTC-TT---CTATTCCGT--CAGACGTTGAGCATGCCCTACTTT-GCTTATG----ATTTTTTAAAT-----AA--T-T-----GG-----CTCTAACT----------A-ACTA-----------ATCATTTGC-ATACATTA-----AAT---TCCCTTTAC--CATCATAGGCAGCGGTG------------------------GCTTTAACGGTGGCAAGCAGCGCG------GCGGTGGACGCSizeHit CountTotal NormTotal
No Reads
droKik1
GTT-----TATTT-----TGCT-----TT-----------------------ATC-----CTAG-AGTTGGTCAAAATTTTCCCAAAAA---------------------------------------------A------A------AAAA--CAATAAGTTTGGCGTAGTT----A-CCGAAA-AATTTAGATAGTCC-----CTCCTCC-TA---CCTTTCCCG--CTGATGTTGAGCATGTCTTTCTTT-G----CGTTT--TT--TTAAAT--G-----TT----G-CAA-----ATTACAC---------ATGGATTA-----------ACTC-TTGTTAT-------TG--AACGTTTTGTTTTAA--AAAAACAGGTGGCGGCGGC------------------GGTAACTTTAACGGCGGAAAGCAGCGCGGTGGCGGCGGTGGACGCSizeHit CountTotal NormTotal
No Reads
droFic1
TAT---TTTATTT-----TGCT-----ATG--------------------TCCCC-----CTAG-AATTGGTCAAAATTTTCCGAAA--AA--------------------------------------------------------GAAAT--CTAGTCGTTTGGCGTAGTT----A-AAGAAA-TCTTTGGATGTC-------C-TTCCC-CT---TTCTTCCCG--CAGACGTTGAGCATGCCTTTCTA---------CCTTTTA---TAAAT---------T-C-----GA-----ATCGAACT----------T-ACTA-----------ATGCCTTGT-AAATCTT---A--AACAT-TTG---TTT--TAAAACAGGCGGCGGTGGC------------------GGAGGTTTCAACGGCGGAAAACAGCGCG------GCGGTGGACGCSizeHit CountTotal NormTotal
No Reads
droEle1
TCT---TTTATTT-----TGCT-----ATG----------------------CCC-----CTAG-AGTTGGCCAAAATTTTCCCTAAAT---------------------------------------------C------C--AAAGAAAT--TAAGTCGTTTGGCGTAGTT----A-AAGAAA-TCTTTAGATGCCCCCACCCCCCCACC-TT---TCCTTCCCG--CAGACGTTGAGCATGCCATTCTTT-C----TGACG-AAA--A-AAA----ACAC--T-C-----AA-----TTTTAACT----------G-ACTA-----------ATGCTTTAA-ACATTTTC-CA--ACCTT-------TTC--TGAAACAGGCGGCGGCGGT------GGTGGC------GGCGGTTTTAACGGTGGCAAGCAACGCG------GCGGTGGACGCSizeHit CountTotal NormTotal
No Reads
droRho1
TGT---TTTATTT-----TGCT-----ATG---------------------CCCC-----TTAG-AGTCGGCCAAAATTTACCAAAAAC---------------------------------------------C------C--AAA-AAA--ATAAGTCGTTTGGCGTAGTT----A-AAGAAA-A-TTTAGATGCTCT-----C-CCTCC-TT---TCCTTCCCG--CAGACGTTGAGCATGCCATTCTTT-C----TGACCAACA----AAATC----AC--T-A-----GA-----ATTTAACC----------G-ACTA-----------ATGCTTTGA-ACGTTTTC-CA--ACCGT-------TTC--TGAAACAGGCGGCGGCGGCGGCGGTGGTGGCGGCGGCGGTGGTTTTAACGGCGGAAAGCAACGCG------GCGGTGGACGCSizeHit CountTotal NormTotal
No Reads
droBia1
GCT------------------------ATG-----CC-----------CCCCCCC-----CTAG-TATTGGTCAAAATTTTCCCA-----A--------------------------------------------------------GAAATACGAAGTCGTTTGGCGTAGTT----A-CAGAAA-TCTTTAGATGCCCT---------TCCTTC---CCCTTCCCG--CAGATGTTGAGCATGACTTTCTTT-T----TGCCTGCTA----TCATA---------------CGA-----ATTCACTT----------G-ACTA-----------ATGCGTTGT-AATTTTTT-AA--AACGT-------TTC--TGTAACAGGCGGCGGCGGC------------------GGCGGTTTTAACGGTGGCAAACAGCGCGGAGG---CGGCGGACGCSizeHit CountTotal NormTotal
No Reads
droTak1
GCT------------------------ATG-------------------CCCCCC-----TTAG-AATTGGTCAAAATTTTCTA--A--AA--------------------------------------------------------GAAATCTGAAGTCGTTTGGCGTAGTT----A-AAATAAATCTTTAGATGCC-------CCCCTCC-TT---CCCTTCCCG--CAGATGTTGAGCATGTGTTTCTTTAT----TGCCTGATA----TCATA---------------CGA-----ATTTAATT----------G-ACTA-----------ATGCCTTGC-AAATTTTTGTA--AACGT-------TTT--TAAAACAGGCGGCGGCGGC---GGTGGTGGCGGAGGAGGCGGTTTCAACGGTGGCAAACAGCGCGGAGG---CGGCGGACGCSizeHit CountTotal NormTotal
No Reads
droEug1
GATA--ATTTTTTAGTTTTGCT-----ATC-----T---C--TCGCCCGCCCCCTTTAGTTTAGAAATTGGTCAAAATTTTTGAA-A--AA--------------------------------------------------------GAAAAATGAAGTCGTTTGGCGTAGTT----A-AAGAAA-ACTTTAGATGCCCTC----TTTCTCC-TTCCCCTCTTCCCG--CAGATGTTCAGCATGTCTTTCTTT-T--TTTGCA---TT----TAAT-------------------------ATTAATTGAAAAATAATG---TA-----AT--TAATA--------TAAATTA-TG--AACAT-------TTT--TTAAATAGGCGGCGGTGGC------------------G---GTTTTAACGGTGGCAAACAGCGTGGCGG---CGGTGGACGCSizeHit CountTotal NormTotal
No Reads
dm3
ACT----TTATTT-----TGCT-----ATG-----CTGTG--CTGC--CCCCCCA-----CTAG-AATTGGTCAAAATTTTCAAAAAAA---------------------------------------------TAACA--AAAAATGAAAACCGAAGTCGTTTGGCGTAGTT----A-ATGATA-TCTATAGATGAACC-----CCTCTCC-TT---TCCTACCCG--CAGATGTTGAGCATGTCTTTCTTT-T----TGCCTGATT----TAATCTGATACTCT-CGATTCGA-----ATTTAACT----------G-ACTA-----------ATGCCTTGC-ACACTTTC-CA--AACGT-------TTC--CACAACAGGCGGTGGCG------------------------GTTTTAACGGTGGCAAGCAGCGCGGAGG---CGGTGGACGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAGCGC..................22133.00330000000000000000000000000000000000000010002000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000120001001100200000000000000000000000000000000000110000020000000002000000000000000001100000000000000000000000000000000000000000000000000000000000000000000100000000511000000010000001001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAGCGCGG................24130.00300000000000000000000000000000000000000010000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000001200102100000000000000000000000000000000000000101000011300000002000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000241000000000000001100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAGCGCG.................23125.00250000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000103000010200000000000000000100100202100000000000000000000000000000000000000000000000000000000000000000001100000000022000000000000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAGCGCGGA...............25120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011010010000000000000000000000000000000000003000000300000000000010000000000201010000000000000000000000000000000000000000000000000000000000000000000001010000020000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAGCG...................21112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000100000000000000000000000000000000100000000000000000000000000000100000000020000000000000000000000000000000000000000000000000000000000000000100000000120000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAGC....................20111.00110000000000000000000000000000000000010000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000110001100000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000
..........................................................................................................................................................................................................................TCCTACCCG--CAGATGTTGAGCATGTC...................................................................................................................................................................................................................26110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGTGGCAAGCAGCGCGG................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAG.....................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAAGCAGCGCGGAGG---CGGT......2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTAACGGTGGCAAGCAGCGCGGA...............2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGGTGGCAAGCAGCGCGGAGG---C.........2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000100000000010000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................G------------------------GTTTTAACGGTGGCAAGCAGCG...................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCAGCGCGGAGG---CGG.......1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000002000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCGGAGG---CGGTGGACGC1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGGTGGCAAGCAGCGCGGAGG---..........2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000100000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAGCGCGGAGG---..........2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGCAGCGCGGAGG---CGGT......2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGCAGCGCGGAGG---CGG.......2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAGCGCGGAG..............2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAAGCAGCGCGGAGG---CGGTG.....2313.0030000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000
..................................................................................................................................................................................................................................................................................................TTCGA-----ATTTAACT----------G-ACTA-----------ATGCCTT...................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGGTGGCAAGCAGCGCGGAG..............2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGCGGAGG---CGGTGGACGC2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGTGGCAAGCAGCGCGGAGG---..........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGGTGGCAAGCAGCGCGGA...............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAAGCAGCGCGGAGG---CGG.......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGTGGCAAGCAGCGCGGAG..............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGGTGGCAAGCAGCGCGGAG..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................AAACCGAAGTCGTTTGGCGTAGT.............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................T---TCCTACCCG--CAGATGTTGAGCA.......................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TTAACT----------G-ACTA-----------ATGCCTTGC-ACACTT..........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTGGCAAGCAGCGCGGAGG---CGG.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................TGGCG------------------------GTTTTAACGGTGGCAAGCAG.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCG------------------------GTTTTAACGGTGGC...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCA......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CCCCA-----CTAG-AATTGGTCAAAAT...........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................G--CAGATGTTGAGCATGTCTTTCTTT-...........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCAAGCAGCGCGGAGG---CGGT......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................TT---TCCTACCCG--CAGATGTTGAGCATG.....................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCAAGCAGCGCGGA...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTAACGGTGGCAAGC.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCTGATACTCT-CGATTCGA-----ATTTAACT----------...........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CCA-----CTAG-AATTGGTCAAAATT..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAAGCAGCGCGGAGG---CGGTGGAC..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................TT---TCCTACCCG--CAGATGTTGAGCA.......................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................CCG--CAGATGTTGAGCATGTC...................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TGC-ACACTTTC-CA--AACGT-------TTC--CACAACA...........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TA-TCTATAGATGAACC-----CCTCTC......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGTGGCAAGCAGCGCGGAA..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGTGGCAAGCAGCGCGG................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GATA-TCTATAGATGAACC-----CCTC........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGGTGGCAAGCAGCGCGGAGG---C.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CG------------------------GTTTTAACGGTGGCAAGCAGCGCG.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................ACTTTC-CA--AACGT-------TTC--CACAACAGGCGGT.....................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGGTGGCAAGCAGC....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TGGCG------------------------GTTTTAACGGTGGCAAGCAGC....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGTGGCAAGCAGCGCG.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................CTACCCG--CAGATGTTGAGCATG.....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGCG------------------------GTTTTAACGGTGG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................CCCG--CAGATGTTGAGCATGTC...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCGCGGAGG---CGGTGGA...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................ATGATA-TCTATAGATGAACC-----CC..........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAA.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGCG------------------------GTTTTAACGG...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................G------------------------GTTTTAACGGTGGCAAG........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAGCGCGA................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAGCGCGGT...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCAAGCAGCGCGGAGG---CGGTG.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGTGGCAAGCAGCGCGGAGG---CGG.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TTTAACT----------G-ACTA-----------ATGCCTTGC-ACACTT..........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TCTTTCTTT-T----TGCCTGATT----TAATCTGA.................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGTGGCAAGCAGCGCGGAGG---CGGTG.....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................GGCG------------------------GTTTTAACGGTGGCAAGCAG.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................CCCCCCA-----CTAG-AATTGGTCAAAATT..........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGGTGGCAAGCAGCGC..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TGCCTGATT----TAATCTGATACTCT-CGA.......................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCGCGGAGG---CGGTGGAC..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACGGTGGCAAGCAGA....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CGA-----ATTTAACT----------G-ACTA-----------ATGCCTTG..................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TACTCT-CGATTCGA-----ATTTAACT----------G-AC.......................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TTAACT----------G-ACTA-----------ATGCCTTGC-ACACTTT.........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGCAAGCAGCGCGG................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGCAAGCAGCGCGGAGG---C.........2211.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CTTTC-CA--AACGT-------TTC--CACAAC............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGCAGCGCGGAGG---C.........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCAGCGCGGAGG---CGGTGGAC..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................TTTAACT----------G-ACTA-----------ATGCCTTGC-ACACT...........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATTTAACT----------G-ACTA-----------ATGCC.....................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTAACGGTGGCAAGCAG.....................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGGTGGCAAGCAGCGCGG................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGTGGCAAGCAGCGCGGAGG---CGGT......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTGGCAAGCAGCGCGG................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGCAGCGCGGAGG---CGGTGG....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGGTGGCAAGCAGCGCGGAGG---..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGTGGCAAGCAGCGCGGAGG---CGT.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGTGGCAAGCAGCGCGGA...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTTTACTTTATTT-----TGCT-----ATG-----CTGTG--CTG---CCCCCCA-----CTAG-AATTGGTCAAAATTTCCCAAAAAA-------------------------------------------------A--AAAAAAGAAAACCCAAGTCGTTTGGCGTAGTT----A-AAGATA-TCTATAGATGAACC-----CCTCTCC-TT---TCCTACCCG--CAGATGTTGAGCATGTCTTTCTTT-T----TGCCTGATT----TAATCTGATACTCT-CGATTC--GAAGAATTTAACT----------G-ACTA-----------ATGCCTTGC-ACACTTTC-CA--AACGT-------TTC--CACAACAGGCGGCGGTGGC------------------G---GTTTTAACGGTGGCAAGCAGCGCGGAGG---CGGTGGACGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................AGAATTTAACT----------G-ACTA-----------ATGCCT....................................................................................................................2211.00100100000000000000
...................................................................................................................................................................TGGCGTAGTT----A-AAGATA-TCTATAGATGA....................................................................................................................................................................................................................................................................2811.00100000000010000000
..............................................................................................................................................................................................TAGATGAACC-----CCTCTCC-TT---...............................................................................................................................................................................................................................................1911.00100000100000000000
...........................................................................................................................................................................TT----A-AAGATA-TCTATAGATGAACC-----C...........................................................................................................................................................................................................................................................2411.00101000000000000000
...................................................................................AAAAAA-------------------------------------------------A--AAAAAAGAAAA.................................................................................................................................................................................................................................................................................................................18200.05100000000000010000
droSec2
GC-----------------------------------------------CCCCCA-----CTAG-AATTGGTCAAAATTTACAAAGA---------------------------------------------------A--AAAAAAGAAAACCCAAGTCGTTTGGCGTAGTT----A-AAGATA-TCTATAGATGAACC-----CCTCTCC-TT---TCCTACCCG--CAGATGTTGAGCATGTCTTTCTTT-T----TGCCTGATT----TAATCTGATACTCT-CGATTC--GAAGAATTTAACT----------G-ACTA-----------ATGCCTTGC-ACACTTTC-CA--AACGT-------TTC--CACAACAGGCGGCGGTGGC------------------G---GTTTTAACGGTGGCAAGCAGCGCGGAGG---CGGTGGACGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................A-TCTATAGATGAACC-----CCTCT.......................................................................................................................................................................................................................................................2011.0011000
droYak3
ACT----TTATTT-----TGCT-----ATG-----CTGTG--------CCCCCCA-----CTAG-AATTGGTCAAAATTTCCAA--A--AA--------------------------------------------------------GAAAACCGAAGTCGTTTGGCGTAGTT----A-ATGAAA-TCTATAGATGAACC-----C-CCTCC-TA---CCCTTCCCG--CAGATGTTGAGCATGTCTTTCTTT-T----TGCCTGATA----TAATCCGATAT--T-CGATTC--G----ATTTAACC----------G-ACTA-----------ATGTCTTGC-ACACTTTC-CA--AACGT-------TTC--CAAAACAGGCGGCGGTGGC------------------G---GTTTTAACGGTGGCAAGCAGCGCGGAGG---CGGTGGACGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGGTGGCAAGCAGCGCGGAGG---..........2511.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................AACAGGCGGCGGTGGC------------------G---GT.......................................1911.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAAGCAGCGCGGAGG---C.........2011.00101000000000
.....................................................................................................................................................................................................................................................................CCTGATA----TAATCCGATAT--T-CGATTC--G----.............................................................................................................................................................2611.00101000000000
.............................................................................................................................................................GTCGTTTGGCGTAGTT----A-ATG...................................................................................................................................................................................................................................................................................2011.00100000010000
droEre2
GT-----------------------------------GTGCGCCCC-CCCCCCCA-----CTAG-AATTGGTCAAAATTTCCAAAAA--AA--------------------------------------------------------GAAAACCGAAGTCGTTTGGCGTAGTT----A-ATGAAC-TCTATAGATAAACC-----C-CTTCC-TT---CCCTTTCCG--CAGATGTTGAGCATGTCTTTCTTT-T----TGCCTGATA----TAAACCGATAC--T-CGATTC--G----ATTTAACC----------G-ACTA-----------ATGCCTTGC-ACACTTTC-CA--AACGT-------TTC--CAAAACAGGCGGCGGCGGC------------------G---GTTTTAACGGTGGCAAGCAGCGCGGAGG---CGGTGGACGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................TCCAAAAA--AA--------------------------------------------------------GAAAACCGAAGTCGC.......................................................................................................................................................................................................................................................................................................2511.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................G---GTTTTAACGGTGGCAAGCAG.....................2111.0010001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCGGAGG---CGGTGGAC..1811.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGCAGCGCGGAGG---C.........1811.0010100000
..........................................................................................A--------------------------------------------------------GAAAACCGAAGTCGTTTGGCG.................................................................................................................................................................................................................................................................................................2211.0011000000
..........................................................................................................................................................................................................................CCCTTTCCG--CAGATGTTGAGCATGTC...................................................................................................................................................................................................................2611.0010000100

Generated: 05/19/2015 at 07:47 PM