dvi_16082

exon [dvir_GLEANR_8492:2]; CDS [Dvir\GJ23131-cds]; CDS [Dvir\GJ23131-cds]; exon [dvir_GLEANR_8492:1]; intron [Dvir\GJ23131-in]

##################################################------------------------------------------------------------------------------------------------################################################## GCACAGATATTGTGATGAGAAATACTACGACACATACATCTCCACCATTGGTAAGTGTTGCGACAGGTGACATACATATACATACATATTTATATATTCTTTTGTCTGGCTTGAATAACAACATCATCCATCCTTCACCCGCCCAGGCATTGACTTTAAACAGAAACTCATTAATCTCGATGGTGTGCCCATAAAG ************************************************....((((((...(((((((((.....(((.(((......))).))).....))))..))))).....))))))......................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060667 160_females_carcasses_total	SRR060678 9x140_testes_total	SRR060686 Argx9_0-2h_embryos_total	SRR1106730 embryo_16-30h	M047 female body	SRR060672 9x160_females_carcasses_total	SRR060684 140x9_0-2h_embryos_total	M027 male body	V053 head
.....GACATTGTGATGAGACATA............................................................................................................................................................................	19	2	1	1.00	1	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................ACTCATTAATCTCGATGGTGT..........	21	0	1	1.00	1	0	1	0	0	0	0	0	0	0
....AGATATTGTGATGAGAAATA............................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................ACTCACTAATCTCGATGGTGT..........	21	1	1	1.00	1	0	1	0	0	0	0	0	0	0
..................................................GTAAGTGTTGCGACAGGTGAC.............................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0	0	0	0
.....GATATTGTGAAGAGACATA............................................................................................................................................................................	19	2	3	1.00	3	0	0	0	0	1	1	1	0	0
.............................................................................................................................................CATTGGCATTGACTTTAAACAGAAACTCATT........................	31	3	1	1.00	1	0	0	0	1	0	0	0	0	0
.....GACATTGTGAAGAGACATAC...........................................................................................................................................................................	20	3	4	0.25	1	0	0	0	0	0	0	0	1	0
..ACAGACATTCTGATGAGA................................................................................................................................................................................	18	2	8	0.13	1	0	0	0	0	0	0	0	0	1
......................................................................CATACATATACATACATATTC.........................................................................................................	21	1	20	0.05	1	0	0	0	0	1	0	0	0	0

CGTGTCTATAACACTACTCTTTATGATGCTGTGTATGTAGAGGTGGTAACCATTCACAACGCTGTCCACTGTATGTATATGTATGTATAAATATATAAGAAAACAGACCGAACTTATTGTTGTAGTAGGTAGGAAGTGGGCGGGTCCGTAACTGAAATTTGTCTTTGAGTAATTAGAGCTACCACACGGGTATTTC ************************************************....((((((...(((((((((.....(((.(((......))).))).....))))..))))).....))))))......................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M047 female body	V116 male body	SRR060654 160x9_ovaries_total	SRR060666 160_males_carcasses_total	SRR060686 Argx9_0-2h_embryos_total	V053 head	SRR060675 140x9_ovaries_total	SRR060676 9xArg_ovaries_total	M027 male body	SRR060656 9x160_ovaries_total
............................CTGTGTGTGTAGAGGTGGTAT...................................................................................................................................................	21	2	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.............................................................CTGTCCACTGTATGTGTATGT..................................................................................................................	21	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0
...............................TGTATGTAGAGGTGGTAACCAT...............................................................................................................................................	22	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................CCGAACTTACTGCTGTAGT......................................................................	19	2	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...........................TCTGTGTGTGTAGAGGTGGTA....................................................................................................................................................	21	2	1	1.00	1	0	0	0	1	0	0	0	0	0	0
.............................TGTGTGTGTAGAGGTGGTAT...................................................................................................................................................	20	2	4	0.25	1	1	0	0	0	0	0	0	0	0	0
............................CTGTGTATGTAGACGTGGA.....................................................................................................................................................	19	2	5	0.20	1	0	0	0	0	0	1	0	0	0	0
........................................................................ATGTATATGTATGTATAAATA.......................................................................................................	21	0	6	0.17	1	0	0	0	0	0	0	1	0	0	0
.....................................................................................................................CGTTGTAGTAGCTAGGAAGC...........................................................	20	3	7	0.14	1	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................TGGTGTAGTGGGTAGGGAGT...........................................................	20	3	8	0.13	1	0	0	0	0	0	1	0	0	0	0
........................................................................ATGTATATGTATGTATAAAT........................................................................................................	20	0	9	0.11	1	0	0	0	0	0	0	0	1	0	0
.............................TGTGTGTGTAGAGGTGGTATG..................................................................................................................................................	21	3	20	0.10	2	0	1	0	0	0	0	0	0	0	1
............................CTGTGTGTGTAGGGGTGGTAT...................................................................................................................................................	21	3	10	0.10	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................CTGGTCCGGAACTGAAAT......................................	18	2	17	0.06	1	0	0	0	0	0	0	0	0	1	0
...........................TCTGTGTGTGTAGAGGTGGTAT...................................................................................................................................................	22	3	20	0.05	1	1	0	0	0	0	0	0	0	0	0
........................................................................................AAAAATATTAGAAAACGGACCG......................................................................................	22	3	20	0.05	1	0	0	0	0	0	0	0	1	0	0
............................CTGTGTGTGTAAAGGTGGTA....................................................................................................................................................	20	2	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................CTGTGTGTGTAGAGATGGTA....................................................................................................................................................	20	2	20	0.05	1	1	0	0	0	0	0	0	0	0	0

Species	Coordinate	ID	Alignment
droVir3	scaffold_13047:8815146-8815341 -	dvi_16082	G--CAC----------AGATATTGTGATGAGAAATACTACGACACATACATCTCCACCATTGGTAAGTGTTGCGACAGGTGA-----------CA----------------------------------TACATATACATACAT----------------------ATTTATATATTC-T------------------TT-TGTCTGGCTTGAATAACAAC----ATCATC--------------------CAT--CCTT---------CACCC----G-------C-------CCAGGCATTGACTTTAAACAGAAACTCATTAATCTCGATGGTGT---------------------GCCCATAA-----------------------AG
droMoj3	scaffold_6540:31866468-31866694 +	dmo_2146	G--CAC----------AGGTATTGCGATGAGAAGTACTACGACACATACATCTCCACAATCGGTGAGTGTTGCCACAGATG------------------------------TATACACA------CGCACACGCACACACACAC--------A------------GTTGCATGCACTCTT-------------------T-TGTCTGGCTTCAATGACAAC----AACAACAACAACTACAACAACAAACAT--CCTTTA---------TCTCT----G-------C-------CCAGGCATTGACTTCAAACAGAAACTCATCAATCTGGACGGTGT---------------------GCCCATAA-----------------------AG
droGri2	scaffold_15074:813785-813987 +		C--CAC----------AGATATTGCGATGAGAAATACTACGACACATACATCTCCACCATCGGTAAGT-----------CAAACGAGATGAGTAAGAAATATATGTAAATGT-TGTGTGTCTGTGTGCGTGTGTC-----------------T----------------------------ATGTGTGTGT----------------------------TTATCTTTTCTT-------------------C--T--TTTG---------CGTTC--------------CCAT--TTAGGCATTGACTTCAAACAGAAGCTCATTAACCTAGATGGTGT---------------------GCCGATAA-----------------------AG
droWil2	scf2_1100000004943:9203870-9204062 -		T--CAC----------AGATATTGCGATGAGAAATACTATGACACATATATATCCACCATAGGTAAGTAAAACACTCGCTCA-----------CA----------------------------------CATATACACACACACACACACACAGCATCAAATTGTTTTCT---------------------------------------TAAT-----------------C-------------------TT--CCTTTT---------TCTTG----A-------CCCTAAA-ATAGGCATTGATTTCAAACAGAAATTAATTAATCTGGATGGAGT---------------------GCCCATAA-----------------------AA
dp5	2:1573926-1574134 +		G--CAC----------AGATACTGCGATGAGAAGTACTACGACACATACATCTCCACCATTGGTGAGTGCATCT------------------------------GCAACTGCATCTGCATCTGCATCCCCC--TC-----------------G----------------------------GCGTATATGTTACATCTTT-TATCTG----------------------------------------------T--TTCATCTCCTCCCACC-CGTCCGCCCACCGCTCTATTTTCAGGCATAGACTTTAAGCAGAAACTGATTAATCTCGATGGGGT---------------------GCCCATAA-----------------------AA
droPer2	scaffold_7:1724603-1724811 +		G--CAC----------AGATACTGCGATGAGAAGTACTACGACACATACATCTCCACCATTGGTGAGTGCATCT------------------------------GCAACTGCATCTGCATCTGCATCCCCC--TC-----------------G----------------------------GCGTATATGTTACATCTTT-TATCTG----------------------------------------------T--TTCATCTCCTCCCACC-CGTCCGCCCACCGCTCTATTTTCAGGCATAGACTTTAAGCAGAAACTGATTAATCTCGATGGGGT---------------------GCCCATAA-----------------------AA
droAna3	scaffold_13340:20374679-20374770 +		G--CAT-------------------------------GTACAACACTATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATC-------------------CCAT--TTTA---------TCTCC----T-------C-------ACAGGCATAGACTTCAAGCAGAAACTGATTAACCTCGATGGGGT---------------------GCCCATAA-----------------------AA
droBip1	scf7180000396413:2026098-2026216 -		TATCTA----------TGTGTTTCCACTGATACATATTCAT----------GTCCGACA----------------------------------------------------------------------------------------------------------------------------------------------------------------CTATC-TTCATC-------------------CCAT--TTTA---------TCTCC----G-------C-------ACAGGCATAGATTTCAAGCAAAAACTGATTAACCTCGATGGGGT---------------------GCCCATAA-----------------------AA
droKik1	scf7180000302461:226239-226448 -		G--CTG----------CGATTCGCCGATGACACATATACAGAAAGCTATATCAGCACAATCGGTGTGGACTTCGTAAGTTAAACG----------GAAT------------------------------------------------------------------GTTGTGAAAACTGTTAA-----------------TGTGTGTGACTCAT-----------------A-------------------AAACCTTTTA---------TCTTG----C-------AGAAAATAAG---------------------GACCATAGAGTTGGACGGCAAGACCATTAAACTGCAAATCGTAAGCATAAACACGATAAAGTTGGAGCCATAATG
droFic1	scf7180000454106:1654960-1655037 +		C--A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----ATCATC-------------------CCAT--TTTA---------TCTTC----C-------C--------CAGGCATAGATTTCAAGCAGAAGCTGATTAACCTCGATGGCGT---------------------GCCCATAA-----------------------AG
droEle1	scf7180000491194:727969-728027 -		G--CAC----------AGATATTGCGACGAGAAGTACTACGACACATACATCTCCACCATAGGTAAGTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1	scf7180000779488:766881-766955 -		A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATC-------------------CCAT--TTTA---------TCTTC----C-------C-------CCAGGCATAGACTTCAAGCAGAAGCTGATTAACCTCGATGGCGT---------------------GCCCATAA-----------------------AG
droBia1	scf7180000297266:135050-135159 -		C--ATGTTTATTGGTTCGTTTTGTTGAAGACAAATTTAACCCGTCATTTATCACCACCATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTATTGATTTCAAAATAAAGACTGTCGATATCAACGGTAA---------------------GAAGGTAA-----------------------AG
droTak1	scf7180000415417:275397-275559 +		G--CTG----------CGATTTGCCGATGACACATATACAGAGAGCTATATCAGCACGATCGGAGTGGATTTCGTAAGCGACAAA----------TAGA------------------------------------------------------------------GTTGTGAAAACCCTA-------------------TGTTCCTGACTCAT-----------------A-------------------AAA-TCTTTA---------TCTTG----C-------AGAAAATCAG---------------------GACCATAGAACTCGACGGAAA---------------------GACCATTA-----------------------AA
droEug1	scf7180000409881:382195-382273 -		C--A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----ATCATC-------------------CTAT--TTTA---------TCTTC----C-------C-------CCAGGCATAGACTTCAAGCAAAAACTGATTAACCTCGATGGCGT---------------------GCCTATAA-----------------------AG
dm3	chr3R:17093220-17093402 -		G--TTG----------CGATTTGCCGATGACACATATACAGAAAGTTATATCAGCACAATCGGAGTGGATTTCGTAAGCCAACCG----------GAAA------------------------------------------------------------------TTTGTGAAAATTCTT-------------------TATGTCTGACTCAT-----------------A-------------------AA--CCTTTA---------TCTTG----C-------AGAAAATCAG---------------------GACTATAGAACTCGACGGAAAGACCATTAAACTGCAAATCGTAAGCATAA-----------------------AA
droSim2	3r:4214097-4214279 +	dsi_12426	G--CTG----------CGATTTGCCGATGACACATATACAGAAAGCTATATCAGCACAATCGGAGTGGATTTCGTAAGCCAGCCG----------GAAA------------------------------------------------------------------TTTGTGAAAACTCTT-------------------TATGTCTGACTCAT-----------------A-------------------AA--CCTTTA---------TCTTG----C-------AGAAAATCAG---------------------GACCATAGAACTCGACGGAAAGACCATTAAACTGCAAATCGTAAGCATAA-----------------------AG
droSec2	scaffold_38:35812-35994 +		G--CTG----------CGATTTGCCGATGACACATATACAGAAAGCTATATCAGCACAATCGGAGTGGATTTCGTAAGCCAGACG----------GAAA------------------------------------------------------------------TTTGTGAAAACTCTT-------------------TATGTCTGACTCAT-----------------A-------------------AA--CCTTTA---------TCTTG----C-------AGAAAATCAG---------------------GACCATAGAACTCGACGGAAAGACCATTAAACTGCAAATCGTAAGCATAA-----------------------AG
droYak3	3R:25843660-25843741 +		A--GCA-----------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------CT----ATCATC-------------------CCAT--TTTA---------TCTTC----C-------A-------CCAGGCATAGACTTTAAGCAAAAGCTGATTAACCTCGATGGAGT---------------------GCCCATAA-----------------------AG
droEre2	scaffold_4770:4566971-4567153 +		G--CTG----------CGATTTGCCGATGACACATATACAGAAAGCTATATCAGCACAATCGGAGTGGATTTCGTAAGCCAACCG----------GAAA------------------------------------------------------------------GTTGTGAAAACTCTT-------------------TATGTCTGACTCAT-----------------A-------------------AA--CCTTTA---------TCTTG----C-------AGAAAATCAG---------------------GACCATAGAACTCGACGGGAAAACCATTAAACTGCAAATCGTAAGCATAA-----------------------AG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

G--CAC----------AGATATTGTGATGAGAAATACTACGACACATACATCTCCACCATTGGTAAGTGTTGCGACAGGTGA-----------CA----------------------------------TACATATACATACAT----------------------ATTTATATATTC-T------------------TT-TGTCTGGCTTGAATAACAAC----ATCATC--------------------CAT--CCTT---------CACCC----G-------C-------CCAGGCATTGACTTTAAACAGAAACTCATTAATCTCGATGGTGT---------------------GCCCATAA-----------------------AG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.............................................................................................................................................................................................................................................................................................................................ACTCATTAATCTCGATGGTGT---------------------.................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................AGATATTGTGATGAGAAATA....................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................GTAAGTGTTGCGACAGGTGA-----------C..........................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CA----------------------------------TACATATACATACAT----------------------ATTC..............................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

G--CAC----------AGGTATTGCGATGAGAAGTACTACGACACATACATCTCCACAATCGGTGAGTGTTGCCACAGATG------------------------------TATACACA------CGCACACGCACACACACAC--------A------------GTTGCATGCACTCTT-------------------T-TGTCTGGCTTCAATGACAAC----AACAACAACAACTACAACAACAAACAT--CCTTTA---------TCTCT----G-------C-------CCAGGCATTGACTTCAAACAGAAACTCATCAATCTGGACGGTGT---------------------GCCCATAA-----------------------AG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

C--CAC----------AGATATTGCGATGAGAAATACTACGACACATACATCTCCACCATCGGTAAGT-----------CAAACGAGATGAGTAAGAAATATATGTAAATGT-TGTGTGTCTGTGTGCGTGTGTC-----------------T----------------------------ATGTGTGTGT----------------------------TTATCTTTTCTT-------------------C--T--TTTG---------CGTTC--------------CCAT--TTAGGCATTGACTTCAAACAGAAGCTCATTAACCTAGATGGTGT---------------------GCCGATAA-----------------------AG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
................................................................................................................................GTGTGTC-----------------T----------------------------ATGTGTGTGT----------------------------.............................................................................................................................................................................	18	20	0.05	1	1	0

droWil2

T--CAC----------AGATATTGCGATGAGAAATACTATGACACATATATATCCACCATAGGTAAGTAAAACACTCGCTCA-----------CA----------------------------------CATATACACACACACACACACACAGCATCAAATTGTTTTCT---------------------------------------TAAT-----------------C-------------------TT--CCTTTT---------TCTTG----A-------CCCTAAA-ATAGGCATTGATTTCAAACAGAAATTAATTAATCTGGATGGAGT---------------------GCCCATAA-----------------------AA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..........................................................................................................................................................................................................................................................................................................................GAAATTAATTAATCTGGATGGAGT---------------------.................................	24	1	1.00	1	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................ATTAATCTGGATGGAGT---------------------GC...............................	19	1	1.00	1	0	0	0	0	1

dp5

G--CAC----------AGATACTGCGATGAGAAGTACTACGACACATACATCTCCACCATTGGTGAGTGCATCT------------------------------GCAACTGCATCTGCATCTGCATCCCCC--TC-----------------G----------------------------GCGTATATGTTACATCTTT-TATCTG----------------------------------------------T--TTCATCTCCTCCCACC-CGTCCGCCCACCGCTCTATTTTCAGGCATAGACTTTAAGCAGAAACTGATTAATCTCGATGGGGT---------------------GCCCATAA-----------------------AA

Size

Hit Count

Total Norm

Total

M022
Male-body

M040
Female-body

M059
Embryo

M062
Head

V043
Embryo

V051
Head

V112
Male-body

SRR902010
Ovary

SRR902011
Testis

SRR902012
CNS imaginal disc

No Reads

droPer2

G--CAC----------AGATACTGCGATGAGAAGTACTACGACACATACATCTCCACCATTGGTGAGTGCATCT------------------------------GCAACTGCATCTGCATCTGCATCCCCC--TC-----------------G----------------------------GCGTATATGTTACATCTTT-TATCTG----------------------------------------------T--TTCATCTCCTCCCACC-CGTCCGCCCACCGCTCTATTTTCAGGCATAGACTTTAAGCAGAAACTGATTAATCTCGATGGGGT---------------------GCCCATAA-----------------------AA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droAna3

G--CAT-------------------------------GTACAACACTATCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATC-------------------CCAT--TTTA---------TCTCC----T-------C-------ACAGGCATAGACTTCAAGCAGAAACTGATTAACCTCGATGGGGT---------------------GCCCATAA-----------------------AA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

TATCTA----------TGTGTTTCCACTGATACATATTCAT----------GTCCGACA----------------------------------------------------------------------------------------------------------------------------------------------------------------CTATC-TTCATC-------------------CCAT--TTTA---------TCTCC----G-------C-------ACAGGCATAGATTTCAAGCAAAAACTGATTAACCTCGATGGGGT---------------------GCCCATAA-----------------------AA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

G--CTG----------CGATTCGCCGATGACACATATACAGAAAGCTATATCAGCACAATCGGTGTGGACTTCGTAAGTTAAACG----------GAAT------------------------------------------------------------------GTTGTGAAAACTGTTAA-----------------TGTGTGTGACTCAT-----------------A-------------------AAACCTTTTA---------TCTTG----C-------AGAAAATAAG---------------------GACCATAGAGTTGGACGGCAAGACCATTAAACTGCAAATCGTAAGCATAAACACGATAAAGTTGGAGCCATAATG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

C--A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----ATCATC-------------------CCAT--TTTA---------TCTTC----C-------C--------CAGGCATAGATTTCAAGCAGAAGCTGATTAACCTCGATGGCGT---------------------GCCCATAA-----------------------AG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

G--CAC----------AGATATTGCGACGAGAAGTACTACGACACATACATCTCCACCATAGGTAAGTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATC-------------------CCAT--TTTA---------TCTTC----C-------C-------CCAGGCATAGACTTCAAGCAGAAGCTGATTAACCTCGATGGCGT---------------------GCCCATAA-----------------------AG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

C--ATGTTTATTGGTTCGTTTTGTTGAAGACAAATTTAACCCGTCATTTATCACCACCATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTATTGATTTCAAAATAAAGACTGTCGATATCAACGGTAA---------------------GAAGGTAA-----------------------AG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

G--CTG----------CGATTTGCCGATGACACATATACAGAGAGCTATATCAGCACGATCGGAGTGGATTTCGTAAGCGACAAA----------TAGA------------------------------------------------------------------GTTGTGAAAACCCTA-------------------TGTTCCTGACTCAT-----------------A-------------------AAA-TCTTTA---------TCTTG----C-------AGAAAATCAG---------------------GACCATAGAACTCGACGGAAA---------------------GACCATTA-----------------------AA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

C--A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----ATCATC-------------------CTAT--TTTA---------TCTTC----C-------C-------CCAGGCATAGACTTCAAGCAAAAACTGATTAACCTCGATGGCGT---------------------GCCTATAA-----------------------AG	Size	Hit Count	Total Norm	Total
No Reads

dm3

G--TTG----------CGATTTGCCGATGACACATATACAGAAAGTTATATCAGCACAATCGGAGTGGATTTCGTAAGCCAACCG----------GAAA------------------------------------------------------------------TTTGTGAAAATTCTT-------------------TATGTCTGACTCAT-----------------A-------------------AA--CCTTTA---------TCTTG----C-------AGAAAATCAG---------------------GACTATAGAACTCGACGGAAAGACCATTAAACTGCAAATCGTAAGCATAA-----------------------AA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...................................................................................................................................................................................................................................................................................................................................AGAACTCGACGGAAAGACCATT...............................................	22	1	47.00	47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	7	9	19	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................CTATAGAACTCGACGGAAAGA....................................................	21	1	18.00	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................TATAGAACTCGACGGAAAGACCATT...............................................	25	1	18.00	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................ACTATAGAACTCGACGGAAAGA....................................................	22	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................TAGAACTCGACGGAAAGACCATTAAAC...........................................	27	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................TACAGAAAGTTATATCAGCACAATCGGA........................................................................................................................................................................................................................................................................................................................................	28	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..................................................................................................................................................................................................................................................................................................AATCAG---------------------GACTATAGAACTCGA............................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................TATATCAGCACAATCGGAG.......................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................CGACGGAAAGACCATTAAACTGCAAATC...................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................TCAGCACAATCGGAGTGGATT.................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................CTATAGAACTCGACGGAAAGACCATT...............................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................AAATCAG---------------------GACTATAGAACTCGACG..........................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................ACTCGACGGAAAGACCATTAAACTGCAA......................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

G--CTG----------CGATTTGCCGATGACACATATACAGAAAGCTATATCAGCACAATCGGAGTGGATTTCGTAAGCCAGCCG----------GAAA------------------------------------------------------------------TTTGTGAAAACTCTT-------------------TATGTCTGACTCAT-----------------A-------------------AA--CCTTTA---------TCTTG----C-------AGAAAATCAG---------------------GACCATAGAACTCGACGGAAAGACCATTAAACTGCAAATCGTAAGCATAA-----------------------AG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..................................................................................................................................................................................................................................................................................................................................TAGAACTCGACGGAAAGACCATTA..............................................	24	1	4.00	4	0	0	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0
................................................................................................................................................................................................................................................................................................................................CATAGAACTCGACGGAAA......................................................	18	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....TG----------CGATTTGCCGATGACACATATACAGAA.............................................................................................................................................................................................................................................................................................................................................................	29	1	3.00	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................ATAGAACTCGACGGAAAGACC..................................................	21	1	3.00	3	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AGCTATATCAGCACAATCGGAGTGGA...................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TCAG---------------------GACCATAGAACTCGACGGAA.......................................................	24	1	2.00	2	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................ATAGAACTCGACGGAAAGA....................................................	19	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................AGCACAATCGGAGTGGAT..................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................CAG---------------------GACCATAGAACTCGACGGAAA......................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................ACCATAGAACTCGACGGAAAGACCATT...............................................	27	1	2.00	2	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.................................................ATCAGCACAATCGGAGTG.....................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................CTCGACGGAAAGACCATTAAACTG.........................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................ATAGAACTCGACGGAAAGACCAT................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................TCAG---------------------GACCATAGAACTCGACGGAAAGACC..................................................	29	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................ACTCGACGGAAAGACCATTAAACTGC........................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................CCATAGAACTCGACGGAAA......................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................GAAAGACCATTAAACTGCA.......................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................ACCATAGAACTCGACGGAAA......................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TCAG---------------------GACCATAGAACTCGACGGAAAGACCA.................................................	30	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................ATCAG---------------------GACCATAGAACTCGACG..........................................................	22	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...................................................CAGCACAATCGGAGTGGATT.................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TCAG---------------------GACCATAGAACTCGACGGAAA......................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...............................................ATATCAGCACAATCGGAGTG.....................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................TATATCAGCACAATCGGAGTGGATT.................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................GACCATAGAACTCGACGGAA.......................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....TG----------CGATTTGCCGATGACACATATACAGA..............................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................T-------------------TATGTCTGACTCAT-----------------A-------------------AA--CCT.......................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................TAGAACTCGACGGAAAGACCATTAAA............................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................................TATCAGCACAATCGGAGTGGATTTC...............................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................ACCATAGAACTCGACGGAAAGACCAT................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................GCCG----------GAAA------------------------------------------------------------------TTTGTGAAAACTCT.....................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TCAG---------------------GACCATAGAACTCGACGGAAAGAC...................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................TCAT-----------------A-------------------AA--CCTTTA---------TCTTG----C-------AG........................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................AATCAG---------------------GACCATAGAACT...............................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................GACCATAGAACTCGACGGAAAGACCAT................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................ACCATAGAACTCGACGGAAAGACCATTA..............................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................TAGAACTCGACGGAAAGACCATTAAAC...........................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................AG---------------------GACCATAGAACTCGACGGAAA......................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................AAATCAG---------------------GACCATAGAACTC..............................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................GACCATAGAACTCGACGGAAA......................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................TATACAGAAAGCTATATCAGCACAATCGGAG.......................................................................................................................................................................................................................................................................................................................................	31	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................GACCATTAAACTGCAAATCT..................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................CATAGAACTCGACGGAAAGACCATT...............................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................ATCAG---------------------GACCATAGAACTCGACGGAAAA.....................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0

droSec2

G--CTG----------CGATTTGCCGATGACACATATACAGAAAGCTATATCAGCACAATCGGAGTGGATTTCGTAAGCCAGACG----------GAAA------------------------------------------------------------------TTTGTGAAAACTCTT-------------------TATGTCTGACTCAT-----------------A-------------------AA--CCTTTA---------TCTTG----C-------AGAAAATCAG---------------------GACCATAGAACTCGACGGAAAGACCATTAAACTGCAAATCGTAAGCATAA-----------------------AG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
............................GACACATATACAGAAAGCT.........................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	2	0
.........................GATGACACATATACAGAAAGCTA........................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	1	0	0	1
..................................................................................................................................................................................................................................................................................................AATCAG---------------------GACCATAGAACTCGACGG.........................................................	24	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................ACTCGACGGAAAGACCATTAAACTGC........................................	26	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................................................TCAG---------------------GACCATAGAACTCGACG..........................................................	21	1	1.00	1	0	0	1	0
...............................................ATATCAGCACAATCGGAGTGG....................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
...................................................CAGCACAATCGGAGTGGATT.................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0
..................................................TCAGCACAATCGGAGTGGAT..................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1
.................................................................................................AA------------------------------------------------------------------TTTGTGAAAACTCTT-------------------TATGTCTGA........................................................................................................................................................................................	26	1	1.00	1	0	1	0	0
.................................................ATCAGCACAATCGGAGTGGAT..................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
...............................................ATATCAGCACAATCGGAGTG.....................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0
.......................................................................................................................................................................................................................................................................................................G---------------------GACCATAGAACTCGACGGAA.......................................................	21	1	1.00	1	0	0	1	0
...............................................ATATCAGCACAATCGGAGTGGATT.................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
................................................................................................................................................................................................................CTCAT-----------------A-------------------AA--CCTTTA---------TCTTG----C-------..........................................................................................................	20	1	1.00	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................AATCAG---------------------GACCATAGAACTCGACGGA........................................................	25	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................ATCAG---------------------GACCATAGAACTCGACGGAAA......................................................	26	1	1.00	1	0	1	0	0
.....................................................................................................................................................................................................................................................................................................CAG---------------------GACCATAGAACTCGACGGAA.......................................................	23	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................AACTCGACGGAAAGACCATTAAACTGC........................................	27	1	1.00	1	0	1	0	0
.........................GATGACACATATACAGAAAGCT.........................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1

droYak3

A--GCA-----------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------CT----ATCATC-------------------CCAT--TTTA---------TCTTC----C-------A-------CCAGGCATAGACTTTAAGCAAAAGCTGATTAACCTCGATGGAGT---------------------GCCCATAA-----------------------AG

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droEre2

G--CTG----------CGATTTGCCGATGACACATATACAGAAAGCTATATCAGCACAATCGGAGTGGATTTCGTAAGCCAACCG----------GAAA------------------------------------------------------------------GTTGTGAAAACTCTT-------------------TATGTCTGACTCAT-----------------A-------------------AA--CCTTTA---------TCTTG----C-------AGAAAATCAG---------------------GACCATAGAACTCGACGGGAAAACCATTAAACTGCAAATCGTAAGCATAA-----------------------AG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.............................ACACATATACAGAAAGCTAT.......................................................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	2	0	0	0	0	1	0
...................................ATACAGAAAGCTATATCAG..................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	1	1	0
..............................................TATATCAGCACAATCGGAGTG.....................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	1	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................ACTCGACGGGAAAACCATTAAACTGC........................................	26	1	2.00	2	0	0	0	0	2	0	0
.................................................................................................................................................................................................................................................................................................................................ATAGAACTCGACGGGAAAACCATT...............................................	24	1	2.00	2	1	0	0	0	1	0	0
............................GACACATATACAGAAAGCTAT.......................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	1	1	0
...............................................ATATCAGCACAATCGGAGTGGAT..................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0
..........................................AAGCTATATCAGCACAATCGGAGTG.....................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
...............................................ATATCAGCACAATCGGAGTGG....................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...................................ATACAGAAAGCTATATCAGCACAATC...........................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................ACGGGAAAACCATTAAACTGC........................................	21	1	1.00	1	0	0	0	0	0	1	0
.........................................AAAGCTATATCAGCACAATCGGAGTGG....................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0
.........................GATGACACATATACAGAAAGCTAT.......................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
..........................................................................................................................................................................................................................................................................................................................................GACGGGAAAACCATTAAACTGC........................................	22	1	1.00	1	0	0	0	0	1	0	0
...............................................ATATCAGCACAATCGGAGT......................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
............................GACACATATACAGAAAGC..........................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
...........................................AGCTATATCAGCACAATCGGAGTGGA...................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
............................................GCTATATCAGCACAATCGGAGTGGAT..................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1	0
..............................................TATATCAGCACAATCGGAGT......................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
.................GATTTGCCGATGACACATAT...................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
........................................GAAAGCTATATCAGCACAATCGGAGTG.....................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
.................................................ATCAGCACAATCGGAGTGGATTTCA..............................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................GACCATAGAACTCGACGGGA.......................................................	20	1	1.00	1	1	0	0	0	0	0	0
...................TTTGCCGATGACACATATACAG...............................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
...................................................CAGCACAATCGGAGTGGATT.................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................TCAG---------------------GACCATAGAACTCGACGGGAAAAC...................................................	28	1	1.00	1	0	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................CCATAGAACTCGACGGGA.......................................................	18	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................................CGACGGGAAAACCATTAAACTGCA.......................................	24	1	1.00	1	1	0	0	0	0	0	0
............................................GCTATATCAGCACAATCGGAGT......................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
............................GACACATATACAGAAAGCT.........................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................G---------------------GACCATAGAACTCGACGGGAAAAC...................................................	25	1	1.00	1	0	0	0	0	1	0	0
...................................ATACAGAAAGCTATATCAGCACAATCGG.........................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
...................................ATACAGAAAGCTATATCAT..................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
............................................GCTATATCAGCACAATCGGAGTGG....................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
..........................................AAGCTATATCAGCACAATCGGA........................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0

dvi_16082

scaffold_13047:8815196-8815291 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads