ID:

dvi_1602

 Coordinate:

scaffold_12723:3986253-3986403 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.6 -11.6 -11.6 -11.0

Flybase annnotation

CDS [Dvir\GJ17922-cds]; exon [dvir_GLEANR_2491:4]; intron [Dvir\GJ17922-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AACACTTTCGAGCCATTGATAAGCCAAGGCCAATTTCGCCTGCAAGCTTTTGCACAGCTGTTACAGAGGTATTTGAGCCCAGAGTTAACCTTTGGCCGTGAAAGTGTGTGTGTACATTTGAATGAAGTCTAATTTCTCCTCATCAAAAATACAAACGACGATGTTACAATTACCAACAACAAAAACCACAATGTTTTACAGGTTTGGGGCTGCGGCGATAAATCATCACGCGAAGTGCAATTGGATATTAA
************************************************************************.................(((....(((..(((((((....)))))))..))))))**************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 V116
male body		 SRR060663
160_0-2h_embryos_total
 M028
head
 SRR060687
9_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 M047
female body
 SRR060659
Argentina_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 V053
head
 V047
embryo
 SRR060658
140_ovaries_total
 M061
embryo
 SRR060675
140x9_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060657
140_testes_total
 SRR060681
Argx9_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060689
160x9_testes_total
 SRR060680
 9xArg_testes_total
 SRR060683
160_testes_total
 GSM1528803
follicle cells		 SRR1106713
embryo_0-2h
 SRR1106714
embryo_2-4h
 SRR1106730
embryo_16-30h
 SRR060674
9x140_ovaries_total
 SRR060688
160_ovaries_total
 SRR060678
9x140_testes_total
 SRR060677
Argx9_ovaries_total
 SRR1106727
larvae
 SRR1106728
larvae
 SRR1106724
embryo_12-14h
 SRR1106720
embryo_8-10h
.............................................................................................................GTGGACATTTGAATGAAGA........................................................................................................................... 19 2 2 1629.50 3259 692 586 425 218 177 197 105 138 101 85 41 84 53 49 54 34 42 31 25 24 17 10 8 7 8 11 9 6 1 3 6 0 3 0 0 3 2 2 0 0 0 1 1 0 0 0
.............................................................................................................GTGGACATTTGAATGAAG............................................................................................................................ 18 1 2 488.50 977 132 9 94 36 112 69 104 50 72 21 44 18 39 36 27 25 11 19 12 11 5 3 6 4 2 2 3 3 4 1 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................CGTGGACATTTGAATGAAG............................................................................................................................ 19 2 2 458.00 916 530 79 20 97 20 28 19 15 14 13 12 6 12 12 13 7 3 2 3 1 3 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGTGGACATTTGAATGAAGA........................................................................................................................... 20 3 9 259.89 2339 1309 323 77 286 44 56 14 26 20 26 21 21 13 14 21 13 11 3 8 6 5 4 7 0 2 1 1 1 1 0 1 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0
............................................................................................................CGTGGACATTTGAATGAA............................................................................................................................. 18 2 14 123.93 1735 1277 3 27 231 21 22 29 9 11 10 8 5 14 10 4 14 7 7 11 4 3 2 1 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1
............................................................................................................CGTGGACATTTGAATGAAGAC.......................................................................................................................... 21 3 1 32.00 32 29 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGAAGG........................................................................................................................... 19 2 4 29.50 118 91 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ACGTGGACATTTGAATGAAG............................................................................................................................ 20 3 14 24.00 336 110 45 31 21 8 15 6 9 8 11 15 6 6 8 15 4 3 1 4 3 3 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGAAGAC.......................................................................................................................... 20 2 1 15.00 15 8 1 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGTGGACATTTGAATGAAGG........................................................................................................................... 20 3 13 11.85 154 126 0 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGGACATTTGAATGAAGA........................................................................................................................... 18 2 11 11.18 123 0 4 14 0 10 15 8 15 7 1 12 4 1 11 5 1 0 2 4 2 0 0 0 2 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................GTGGACATTTGAATGAAGACC......................................................................................................................... 21 3 3 3.67 11 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGTACATTTGAATGAAG............................................................................................................................ 18 0 1 3.00 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGA.............................................................................................................................. 16 1 10 2.50 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGTTACAGAGGTGTTTGAGCC............................................................................................................................................................................ 21 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATAAATCATCACGCGAAGTGC............. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGAAGAGT......................................................................................................................... 21 3 6 1.33 8 2 0 3 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGAA............................................................................................................................. 17 1 5 1.20 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 2 0 0
AACACTTTCGAGCCATTGATA...................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TGTTTGAGCCCAGAGTTAACCT................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTGAGCCCAGAGTTAACCTT............................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TTAACCTTTGGCCGTGAAAGT.................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................CCAATTTCGCCTGCAAGCTTT......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AACAACAAAAACCACAATGTT........................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TTGGCCGTGAAAGTGTGTGTG........................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TGTGGACATTTGAATGAAGA........................................................................................................................... 20 2 2 1.00 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CAATGTTTTACGGGTTTGGG........................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TGCAGAGGTGTTTGAGCCCAGG........................................................................................................................................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GGGGACATTTGAATGAAGAC.......................................................................................................................... 20 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGTACATTTGAATGAAGAG.......................................................................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATAAATCATCACACGAAGTGC............. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TACAGGTTTGGGGCTGCGGCG.................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TTACAGAGGTATTTGAGC............................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GCGATAAATCATCACGCGAAGTGC............. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GTACATTTGAATGAAGAC.......................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTTGAGCCCAGAGTTGACCTT............................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................AACCTTTGGCCGCGAAAGTGTC............................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTGAGCCCAGAGTTAACCTTT.............................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGGCGATAAATCATCACGCGA.................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTACAGGTTTGGGGCTGCGGC................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AATCATCACGCGAAGTGCAAT.......... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTTGGCCGTGAAGGTGTGT.............................................................................................................................................. 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CAATGTTTTGCAGGTTTGGGGT......................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................ATTGAGGTTTGGGGCTGCGGCGATAAATC........................... 29 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTGAGCCCAGAGTTGGCCTTT.............................................................................................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TAACCTTTGGCCGCGAAAGTG................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GCGTGGACATTTGAATGAAG............................................................................................................................ 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................GTTTTACAGGTTTGGGGCTGCGGC................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGTACATTTGAATGAAGA........................................................................................................................... 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATGAATCATCACGCGAGGTGC............. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGTGTACATTTGAATGAAGA........................................................................................................................... 20 2 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGTACATTTGAATGAAGAGC......................................................................................................................... 21 3 9 0.56 5 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGAGCGTGGACATTTGAATGAA............................................................................................................................. 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGTGGACATTTGAATGAAGT........................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGTGTACATTTGAATGAA............................................................................................................................. 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GGGTGGACATTTGAATGAAGA........................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AAGTGTGTGAGTAAATTTGA.................................................................................................................................. 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGTGGACATTTGAATGAAGC........................................................................................................................... 20 3 13 0.38 5 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GGGGACATTTGAATGAAGA........................................................................................................................... 19 3 20 0.35 7 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATGTGGACATTTGAATGAAG............................................................................................................................ 20 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GAGCGTGGACATTTGAATGAA............................................................................................................................. 21 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTTGGCCGCGATAGTGTGT.............................................................................................................................................. 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CGCGAAAGTGTGTGTGTACATC..................................................................................................................................... 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................GTGCACATTTGAATGAAGA........................................................................................................................... 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGAAGCTT......................................................................................................................... 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GGTGGACATTTGAATGAAG............................................................................................................................ 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TGTGGACATTTGAATGAA............................................................................................................................. 18 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGACG............................................................................................................................ 18 2 8 0.25 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGAAGC........................................................................................................................... 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGAAGACA......................................................................................................................... 21 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GGGGACATTTGAATGAAG............................................................................................................................ 18 2 9 0.22 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGTGCACATTTGAATGAAG............................................................................................................................ 19 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACCTTTGAATGAAG............................................................................................................................ 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGAAGAA.......................................................................................................................... 20 3 20 0.20 4 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GAGGACATTTGAATGAAG............................................................................................................................ 18 2 11 0.18 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GCGGACATTTGAATGAAG............................................................................................................................ 18 2 12 0.17 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................ATCGGGGCCCAGAGTTAAC.................................................................................................................................................................. 19 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGAAC............................................................................................................................ 18 2 12 0.17 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTCAATGAAGA........................................................................................................................... 19 3 20 0.15 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGTGGATATTTGAATGAAG............................................................................................................................ 19 3 20 0.15 3 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CTGGACATTTGAATGAAG............................................................................................................................ 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAACGAAGA........................................................................................................................... 19 3 15 0.13 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ACGTGTACATTTGAATGAAGA........................................................................................................................... 21 3 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTCAATGAAG............................................................................................................................ 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTCGAATGAAG............................................................................................................................ 18 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGGATGAAGA........................................................................................................................... 19 3 20 0.10 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGGACATTTGAATGAAG............................................................................................................................ 18 2 20 0.10 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GGTGGACATTTGAATGAAGA........................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTTGACATTTGAATGAAG............................................................................................................................ 18 2 20 0.10 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGGGGACATTTGAATGAAG............................................................................................................................ 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................ATGGACATTTGAATGAAG............................................................................................................................ 18 2 20 0.10 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................CAGTGGACATTTGAATGAAG............................................................................................................................ 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGTATGTGGTCATTTGAATGA.............................................................................................................................. 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATGTGGACATTTGAATGAA............................................................................................................................. 19 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................GGAATTTGAGCCTAGAGGT..................................................................................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATGTGGACATTTGAATGAAGA........................................................................................................................... 21 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGAGCGTGGACATTTGAATG............................................................................................................................... 20 3 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................AGTGGACATTTGAATGAA............................................................................................................................. 18 2 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGTGGTCATTTGAATGAAG............................................................................................................................ 19 3 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGTGGACATTTGAATGGAG............................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGTGGACATTCGAATGAAG............................................................................................................................ 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CCTGAAACTGTGTGCGTACA....................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTGAATGAAGAT.......................................................................................................................... 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGCACATTTGAATGAAGAG.......................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGGACATTTTAATGAAG............................................................................................................................ 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTGTGAAAGCTCGGTAACTATTCGGTTCCGGTTAAAGCGGACGTTCGAAAACGTGTCGACAATGTCTCCATAAACTCGGGTCTCAATTGGAAACCGGCACTTTCACACACACATGTAAACTTACTTCAGATTAAAGAGGAGTAGTTTTTATGTTTGCTGCTACAATGTTAATGGTTGTTGTTTTTGGTGTTACAAAATGTCCAAACCCCGACGCCGCTATTTAGTAGTGCGCTTCACGTTAACCTATAATT
****************************************************************************************************************************.................(((....(((..(((((((....)))))))..))))))************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060677
Argx9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060679
140x9_testes_total
 SRR060683
160_testes_total
 SRR060681
Argx9_testes_total
 V116
male body		 SRR060676
9xArg_ovaries_total
 SRR060689
160x9_testes_total
 SRR060655
9x160_testes_total
 SRR060659
Argentina_testes_total
 SRR060673
9_ovaries_total
 M027
male body		 SRR060670
9_testes_total
 SRR060675
140x9_ovaries_total
 M028
head
 M061
embryo
 SRR060658
140_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060665
9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR1106727
larvae
 GSM1528803
follicle cells
....................................................................................................................................................................................................................GCCGCTATTTAGTAGTGCGCTT................. 22 0 1 3.00 3 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................TCGAAAACGTGTCGACAATGTCTCCAT.................................................................................................................................................................................... 27 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TCAGATTAAAGAGGAGTAGTTTTTATGT.................................................................................................. 28 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................TTAAAGAGGAGTAGTTTTTAT.................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................AGCGGACGTTCGAAAACGTG.................................................................................................................................................................................................... 20 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GCGCTTCACGTTAACCTATA... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGCTATTTAGTAGTGCGCTTCACGTTAA......... 28 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGTTGTTTTTGGTGTTACAAA....................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TGGAAACCGGCACTTTCACAC............................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGCCGCTAATTAGTAATG...................... 18 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGCTATTTAGTAGTGCGCTTCACGTT........... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................ACCGGCACTTTCACACACACAT......................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GGTTCCGGTTAAAGCGGACGT............................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TTAAAGCGGACGTTCGAAAAC....................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................TTGATGTTACAAAATGTC.................................................. 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TAGTAGTGCGCTTCACGTTAACCTAT.... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GCTGCTACAGTGTTAATGGTTGTTGT...................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................CAATGTCTCCATAAACTCGG............................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GGTCTCGGTTGGAAACCGGCAC....................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TCAGATTGAAGAGGAGTAGTT......................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AGTTTTTATGTTTGCTGCTAC........................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GCTGCTACAGTGTTAATGGTTGTCGT...................................................................... 26 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AGTAGTTTTTATGTTTGCTGCTACAA...................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CGAAAACGTGTCGACAATGTCTCAAT.................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.TGTGAAAGCTCGGTAACTATT..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................CAATGTTGATGGTTGTTGTTT.................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CCGCTATTTAGTAGTGCGCTTCACGT............ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CCGACGCCGCTATTTAGTAGT....................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTTTTGGTGTTACAAAATGTC.................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................CTGGTTGTTGTTTTTGGTGT............................................................. 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CTTCAGATTGGAGAGGAGTAGT.......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................ATGTTTGCTGCTACAGTGTTAATGGT............................................................................ 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................CGGGTCTCAATTGGAAACCGGCACTT..................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTAGTAGTGCGCTTCACGTTA.......... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGTTTGCTGCTACAGTGTTAA................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CTACAGTGTTAATGGTTGTTGTTT.................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................ACTCGGGTCTCAATTGGGAA.............................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................ACTCGGGTCTCAATTGGAAAC............................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GTGAAAGCTCGGTAACTATTC.................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................TCGAAAACGTGTCGACAATGTCTC....................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TAACTATTCGGTTCCGGTTA......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGCTATTTAGTAGTGCGCTTC................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GACAATGTCTCCATAAACTCGGGTCTCA...................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................CCATAAACTCGGGTCTCAATTGGAA............................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GAGGAGTAGTTTTTATGTTTG............................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ACCGGCACTTTCACACACACA.......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TTTGGTGTTACAAAATGTCCA................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGTTGTTGTTTTTGGTGT............................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTAGTGCGCTTCACGTTAAC........ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................GTGTCGACAATGTCTCCATAA.................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TCTCAGTTGGAAACCGGCGCT...................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................CGACGCCGCTATTTAGTAGTGC..................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGGTTGTTGTTTTTGATGTTACAAAAT..................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................AGGAGTAGTTTTTATGTTTGC.............................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................TCAGTTGGAAACCGGCACTTT.................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTGCTGCTACAATGTTAATGGTTGTTG....................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................CATAAACTCGGGTCTCAATTG.................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CCCGACGCCGCTATTTAGTA......................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCTATTTAGTAGTGCGCTTCA............... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................TTCGGTTCCGGTTAAAGCGGACGTT.............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GTTTGCTGCTACAATGTTAATGGTTGTT........................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CCCGACGCCGCTATTTAGTAGTGCGCT.................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GGAGTAGTTTTTATGTTTGC.............................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................AGCGGACGTTCGAAAACGTT.................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................GGCACTTTCACACACACATG........................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AGTTTTTATCTTTGCTGCTAC........................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTTTTATGTTTGCTGCTACAAT..................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TAAAGAGGAGTAGTTTTTATG................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CGGCGCTTTCACACACACAT......................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................ATGTTTGCTGCTACAATGTTA................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................GTTAAAGCGGACGTTCGAAAA........................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TGCTACAGTGTTAATGGTTGTTGTTT.................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGTAGTGCGCTTCACGTTAACCTATAAT. 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......AGCTCGGTAACTATTCGGTTC............................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGTTGTTGTTTTTGGTGTTAC.......................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTGCTGCTACAATGTTAATGGTTGTT........................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACTTCAGATTGGAGAGGAGTA............................................................................................................ 21 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................TTCGAAAACGTGTCGACAATG........................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TGTTAATGGTTGTTGTTTTTGGTGT............................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................ATGTTTGCTGCTACAGTGTTAATGGTT........................................................................... 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GTGTTAATGGTTGTTGTTTTT.................................................................. 21 1 2 1.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGTTGTTGTTTTTGATGTTAC.......................................................... 21 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GACCTCGGTAAGTATTCGGT................................................................................................................................................................................................................................. 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TAGTAGTGCGTTTCA............... 15 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................AGTGGTTTGTTTGTTTGCTGC........................................................................................... 21 3 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGATGTTGTTTTTCGTGTT............................................................ 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12723:3986203-3986453 - dvi_1602 -AACACTTTC--GAGCCATTGATA-AGCCAAGGCCAATTTCG--CCTGCAAGCTTTTGCACAGCTGTTACAGAGGT---------------ATTTGAGCCCAGAGTTAACCTTTGGCCGTGAAAGTG---TGTGTG-----TACATT--TGAATGAAGTCTAA-TTTCTCCT-CATCAA------AAA-TA-CAAACGA---CGATGTT-----------ACAATTACC---AACAACAA---AA--ACCACAA--T---GT-----------------------------------------------TTTACAGGTTTGGGGCTGCGGCGATAAATCATCACGCGAAGTGCAATTGGATATTAA
droMoj3 scaffold_6500:14741154-14741436 + A-ACACTTTC--GAGCCGCTGCTAGAGTCAAGGCCA---TCGAACTTGGACGCTTGATCATTGCCG-----GAGTCAATTTACTTAAGTTCAATCGAGGCCAGACTCAACAGTAGGGCGCGAAAGTGT-GTG---------TACATA--CAAATGAAGTCTAAA---TTCTT-TACCAA------ACAAAACAAAACAAATTCAATTCCGAGACAACAA-ATTGTTACCAACAACAACAA---GA--TGAATA--ACGACGCTC--TC----------------------------------------TCTTACAGGTTTGGGGCTGCGGCGATAAATCATCACGCGATGTGCAATTGGATATTAA
droGri2 scaffold_15252:3671497-3671738 + -ACAACACTTTCAAGCTGCTG------------TCA---ACGAGCT-AAAAGCTTAAACATGGCC----------------------------TTTAGGCCAGACTTAACAGTAGAGCGTGAAAGTGT-GTG---------TATATT--TAAATCAAGTCTACATTTCTCCA-TACCCA------AAA-CG-AAAACAA---CAATGGAAAAGCAACAG-AATATTACC---AACAACAACAAAA--ACA-----AT---GCAC--TTG----------------TCT-----------------------TTCAGGTTTGGGGCTGCGGCGATAAATCGTCACGCGAAGTGCAATTGGATATTAA
droWil2 scf2_1100000001505:1715-1906 + -AACACATTT--TTTGTT----------------------------------------------------------------------------------------------------------------------TGCG-TTTATT--CGAATTAAGTCTACAATTCTCCA-TAGTCA---AGAGCAACA---------------------------AATTT---ACC---AACAACAA---AA-AGCCACACAAT---GCCATTTCCATTTCTTTAAACTGTTGTTCACC--TCTT-CG-TT--TCTCCTTCAGGTGTGGGGATGCGGTGACAAATCATCACGTGAAGTGCAATTGGATATTAA
dp5 4_group3:210839-211026 - -AACACATTT--CGGCATC---------------------------------------------------------------------------CTA--------------CTAGTG-C-GCAATTG---TGTTTTTACGATGCATT--TCAATTAAGTCTACGTTTCTCCT-TACCCA------ACAACA---------------------------A-TTT---ACC---AACAACAA---GA--ACTACACGTT---GCAC--CGT----------------TCT--TT--CCTT-----C--T-CTCGACAGGTGTGGGGTTGCGGCGACAAATCATCACGCGAAGTGCAATTGGACATCAA
droPer2 scaffold_1:1685633-1685820 - -AACACATTT--CGGCATC---------------------------------------------------------------------------CTA--------------CTAGTG-C-GCAACTG---TGTTTTTACGATGCATT--TCAATTAAGTCTACGTTTCTCCT-TACCCA------ACAACA---------------------------A-TTT---ACC---AACAACAA---GA--ACTACACGTT---GCTC--CGT----------------TCT--TT--CCTT-----C--T-CTCGACAGGTGTGGGGCTGCGGCGACAAATCATCACGCGAAGTGCAATTGGACATCAA
droAna3 scaffold_12916:13798697-13798896 + CCACACACCT--GTTCCTT---------------------------------------------------------------------------CTA--------------A---TG-GCCCAGGTG---TGTTCGTACGATGCATT--TCAACTAAGTCTACGATTCTCCTCCACC-ACTCACAACAACA---------------------------C-TCTACTACC---AACAACAA---GA--ACTACACATT---GCTC--TCC---------------------TT--TATC-TGATCTCTCCTCCATAGGTATGGGGCTGCGGCGACAAGACATCACGCGAAGTGCAATTGGACATCAA
droBip1 scf7180000396535:762642-762830 + CCACACACCT--GTTCCTT---------------------------------------------------------------------------CTA--------------A---TG-G-CCAGGTG---TGTTCGTACGATGCATT--TAATTAAAGTCTACGATTCTCCT-TACCAC-TCACAACAACA---------------------------C-TCT---ACC---AACAACAA---GA--ACTACACATT---GCTC--TCC----------------TCT--AT--CA----------TCATCCACAGGTGTGGGGCTGCGGCGACAAGACATCACGCGAAGTGCAATTGGACATCAA
droKik1 scf7180000302677:164569-164777 - -ACCACACCT--GTGCCGC---------------------------------------------------------------------------CTA--------------A---TG-G-CCAGGTGTTGTGCTCTTATGATGCATTTTTAAACCAAGTCTACGATTCTCCT-CACCCA------ACAACA-ACAACAA---CAGT------------G-TCT---ACC---AACAACAA---GA--ACTACACGTT---GCTC--TCTC---------------TCTCCCC--TTTT-GGTTT--TCCATCGCAGGTCTGGGGATGCGGCGACAAGACATCACGCGAAGTGCAATTGGACATCAA
droFic1 scf7180000453838:161351-161547 + CAGCACACCG--TTGCCTG---------------------------------------------------------------------------CTA--------------A---TG-G-CCAGGTGT-GCATTCTAGCGATGCATT--TAAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--CC-ACT-------------TCTCCTC--TCTC-CGATC--TCCTCCGCAGGTTTGGGGCTGCGGCGACAAAACATCACGCGAAGTGCAATTGGACATCAA
droEle1 scf7180000491186:3014113-3014306 + CAGCACACCA--GTGGCTT---------------------------------------------------------------------------TTA--------------A---TG-G-CCAGGTG---TGCTCTAGCGATGCATT--TTAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GACAACTACACGTT---GCTT--CCCG---------------CTT--TT--TCTT-TGATC--TCCTCACCAGGTCTGGGGCTGCGGCGACAAGTCATCACGCGAAGTGCAATTGGACATCAA
droRho1 scf7180000779234:233654-233842 - CAGAACACCA--GTGCCTC---------------------------------------------------------------------------CTA--------------A---TG-G-CCAGGTG---TGCTCTAGCGATGCATT--TTAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--CCC----------------TCT--TA--TTTTCTGATC-----TCCACAGGTGTGGGGCTGCGGCGACAAAACATCACGCGAAGTGCAATTGGACATCAA
droBia1 scf7180000301468:61765-61947 + CAGCACACCA--GT------------------------------------------------------------------------------------------------------G-G-GGATGTG---TGCTCTAGCGATGCATT--TAAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--ATC----------------TGT--TCCATCTT-CTATC--TCCTCCGCAGGTCTGGGGGTGCGGCGACAAGACATCACGCGAAGTGCAATTGGACATCAA
droTak1 scf7180000415667:552310-552464 - -AGCACAC-----------------------------------------------------------------------------------------------------------------------------TCTAGCGATGCATT--ATAACTAAGTCTACGATTCTCCT-CATCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--CTCC---------------TTT--TC--T-------------CTTCACAGGTCTGGGGCTGCGGCGATAAATCATCACGTGAAGTGCAATTGGACATCAA
droEug1 scf7180000409554:4952644-4952834 - TCGCACACCA--GTGCCTC---------------------------------------------------------------------------TTA--------------A---TG-G-CATGGTG---TACTCTAGCGATGCAAT--TTAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCAACCACC---AACAACAA---AA--ACTTCACGTT---GCTC--CTC---------------------TT--TCTT-CGATC--TCATCCGCAGGTGTGGGGCTGCGGCGATAAAACATCACGCGAAGTGCAATTGGACATCAA
dm3 chr2L:9959406-9959599 + CAGCACACGT--ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTGT-GTGCTCTAGCGATGCATT--TAAACTAAGTCTACGATTCTCCA-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--GCCA---------------TCT--TT--TCTT-CGATC--TCATCCGCAGGTGTGGGGCTGCGGCGACAAATCATCACGCGAAGTGCAATTGGACATCAA
droSim2 2l:9657321-9657514 + CATCACACGT--ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTGT-GTGCTCTAGCGATGCATT--TAAACTAAGTCTACGATTCTCCA-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--GCCA---------------TCT--TT--TCTT-CGATC--TCATCCGCAGGTGTGGGGCTGCGGCGACAAATCATCACGCGAAGTGCAATTGGACATCAA
droSec2 scaffold_3:5406119-5406312 + CAGCACACGT--ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTGT-GTGCTCTAGCGATGCATT--TAAACTAAGTCTACGATTCTCCA-TACCCA------ACAATA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--GCCA---------------TCT--TT--TCTT-CGATC--TCATCCGCAGGTGTGGGGCTGCGGCGACAAATCATCACGCGAAGTGCAATTGGACATCAA
droYak3 2L:12650053-12650244 + CAGCACACTT--ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTG---TGCTCTAGCGATGTATT--TAAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------A-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTA--CCCA---------------TCT--TC--TTTT-CGATC--TTATCCGCAGGTGTGGGGCTGCGGCGACAAAACATCACGCGAAGTGCAATTGGACATCAA
droEre2 scaffold_4929:10579695-10579886 + CAGCACACTT--ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTG---TGCTCTAGCGATGTATT--TAAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--CCCA---------------TCT--TC--TATT-CGATC--TTATCCGCAGGTGTGGGGCTGCGGCGACAAAACATCACGCGAAGTGCAATTGGACATCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
-AACACTTTC--GAGCCATTGATA-AGCCAAGGCCAATTTCG--CCTGCAAGCTTTTGCACAGCTGTTACAGAGGT---------------ATTTGAGCCCAGAGTTAACCTTTGGCCGTGAAAGTG---TGTGTG-----TACATT--TGAATGAAGTCTAA-TTTCTCCT-CATCAA------AAA-TA-CAAACGA---CGATGTT-----------ACAATTACC---AACAACAA---AA--ACCACAA--T---GT-----------------------------------------------TTTACAGGTTTGGGGCTGCGGCGATAAATCATCACGCGAAGTGCAATTGGATATTAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................GTG-----TACATT--TGAATGAAG................................................................................................................................................................................................................1813.003000000000000000000000020000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ATAAATCATCACGCGAAGTGC.............2112.002000000000000000000000000000000000100000100000000000000000000000
.AACACTTTC--GAGCCATTGATA-.....................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
.............................................................................................TTGAGCCCAGAGTTAACCTT.............................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................TTAACCTTTGGCCGTGAAAGT................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
.................................CCAATTTCG--CCTGCAAGCTTT......................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................AACAACAA---AA--ACCACAA--T---GT-----------------------------------------------T........................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................TTGGCCGTGAAAGTG---TGTGTG-----.................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................GTG-----TACATT--TGAATGAAGAG..............................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TACAGGTTTGGGGCTGCGGCG..................................2111.001000000000000000000000000000001000000000000000000000000000000000
..................................................................TTACAGAGGT---------------ATTTGAGC...........................................................................................................................................................................................................................................................................1811.001000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GCGATAAATCATCACGCGAAGTGC.............2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................TTGAGCCCAGAGTTAACCTTT............................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................CGGCGATAAATCATCACGCGA..................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TTACAGGTTTGGGGCTGCGGC...................................2111.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................AATCATCACGCGAAGTGCAAT..........2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................GT-----------------------------------------------TTTACAGGTTTGGGGCTGCGGC...................................2411.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GTG-----TACATT--TGAATGAAGA...............................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................GTG-----TACATT--TGAATGAAGAGC.............................................................................................................................................................................................................2190.565100100000000010000000000000001000000000000000000000000000000010
droMoj3
A-ACACTTTC--GAGCCGCTGCTAGAGTCAAGGCCA---TCGAACTTGGACGCTTGATCATTGCCG-----GAGTCAATTTACTTAAGTTCAATCGAGGCCAGACTCAACAGTAGGGCGCGAAAGTGT-GTG---------TACATA--CAAATGAAGTCTAAA---TTCTT-TACCAA------ACAAAACAAAACAAATTCAATTCCGAGACAACAA-ATTGTTACCAACAACAACAA---GA--TGAATA--ACGACGCTC--TC----------------------------------------TCTTACAGGTTTGGGGCTGCGGCGATAAATCATCACGCGATGTGCAATTGGATATTAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................TTACTTAAGTTCAATCGAGGC..........................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................AATCATCACGCGATGTGCAATTGG.......2411.001100000
..................................................................................................................................................................................................................................................................................................................................................CATCACGCGATGTGCAATTGG.......2111.001100000
...................................................................................................................................................................................................................................................................................................................................................ATCACGCGATGTGCAATTGG.......2011.001100000
............................CAAGGCCA---TCGAACTTGGACG..........................................................................................................................................................................................................................................................................................................................2111.001100000
....................................................CTTGATCATTGCCG-----GAGTCAA................................................................................................................................................................................................................................................................................................2111.001000001
...........................................................................................................................................................................................................................................AACAA---GA--TGAATA--ACGACGCT.......................................................................................................2111.001000001
..................................................CGCTTGATCATTGCCG-----GAGTC..................................................................................................................................................................................................................................................................................................2111.001001000
...........................................................................................................................................................................................................................................................................................................................................GATAAATCATCACGCGATGTGCAATTGG.......2811.001100000
......................................................TGATCATTGCCG-----GAGTCAAT...............................................................................................................................................................................................................................................................................................2011.001000001
..........................................................................................................................................................................................................................................................................................................................................CGATAAATCATCACGCGATGTGC.............2311.001100000
.............................................TTGGACGCTTGATCATTGCCG-----GAG....................................................................................................................................................................................................................................................................................................2411.001100000
...........................................................................................................................................................................................................................................................TA--ACGACGCTC--TC----------------------------------------TCTTACAG..................................................2111.001100000
droGri2
-ACAACACTTTCAAGCTGCTG------------TCA---ACGAGCT-AAAAGCTTAAACATGGCC----------------------------TTTAGGCCAGACTTAACAGTAGAGCGTGAAAGTGT-GTG---------TATATT--TAAATCAAGTCTACATTTCTCCA-TACCCA------AAA-CG-AAAACAA---CAATGGAAAAGCAACAG-AATATTACC---AACAACAACAAAA--ACA-----AT---GCAC--TTG----------------TCT-----------------------TTCAGGTTTGGGGCTGCGGCGATAAATCGTCACGCGAAGTGCAATTGGATATTAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
-AACACATTT--TTTGTT----------------------------------------------------------------------------------------------------------------------TGCG-TTTATT--CGAATTAAGTCTACAATTCTCCA-TAGTCA---AGAGCAACA---------------------------AATTT---ACC---AACAACAA---AA-AGCCACACAAT---GCCATTTCCATTTCTTTAAACTGTTGTTCACC--TCTT-CG-TT--TCTCCTTCAGGTGTGGGGATGCGGTGACAAATCATCACGTGAAGTGCAATTGGATATTAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................ACGTGAAGTGCAATTGGATATT..2220.50100100
...........................................................................................................................................................................................................................................................................................................................................GACAAATCATCACGTGAAGTG..............2120.50100100
................................................................................................................................................................................................................................................................................................................................................ATCATCACGTGAAGTGCAATTGGATA....2620.50100100
.......................................................................................................................................................................................................................................................................................................................................................CGTGAAGTGCAATTGGATAT...2020.50100100
............................................................................................................................................................................................................................................................................................................................GTGTGGGGATGCGGTGAA................................1820.50101000
............................................................................................................................................................................................................................................................................................................................GTGTGGGGATGCGGTGACA...............................1920.50101000
dp5
-AACACATTT--CGGCATC---------------------------------------------------------------------------CTA--------------CTAGTG-C-GCAATTG---TGTTTTTACGATGCATT--TCAATTAAGTCTACGTTTCTCCT-TACCCA------ACAACA---------------------------A-TTT---ACC---AACAACAA---GA--ACTACACGTT---GCAC--CGT----------------TCT--TT--CCTT-----C--T-CTCGACAGGTGTGGGGTTGCGGCGACAAATCATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................TCACGCGAAGTGCAATTGGAC.....2113.0031200000000
.......................................................................................................................................................................................................................................................................................................................................................CGCGAAGTGCAATTGGACATC..2111.0010100000000
.....CATTT--CGGCATC---------------------------------------------------------------------------CTA--------------CTAGTG-........................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................ACGCGAAGTGCAATTGGAC.....1911.0011000000000
............................................................................................................................................................................................................................................................................................................................................ACAAATCATCACGCGAAGTG..............2011.0010100000000
........................................................................................................................................................................................................................................................................................................TT-----C--T-CTCGACAGGTGTGGT...........................................1911.0010000001000
..........................................................................................................................................CGATGCATT--TCAATTAAGTCT.............................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................AAGTGCAATTGGACATCA.1811.0010100000000
.......TTT--CGGCATC---------------------------------------------------------------------------CTA--------------CTAGTG-C-G.....................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................CTACGTTTCTCCT-TACCCA------AC...................................................................................................................................................................................2111.0010100000000
droPer2
-AACACATTT--CGGCATC---------------------------------------------------------------------------CTA--------------CTAGTG-C-GCAACTG---TGTTTTTACGATGCATT--TCAATTAAGTCTACGTTTCTCCT-TACCCA------ACAACA---------------------------A-TTT---ACC---AACAACAA---GA--ACTACACGTT---GCTC--CGT----------------TCT--TT--CCTT-----C--T-CTCGACAGGTGTGGGGCTGCGGCGACAAATCATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................AGGTGTGGGGCTGCGGCGACA...............................2111.001000001
droAna3
CCACACACCT--GTTCCTT---------------------------------------------------------------------------CTA--------------A---TG-GCCCAGGTG---TGTTCGTACGATGCATT--TCAACTAAGTCTACGATTCTCCTCCACC-ACTCACAACAACA---------------------------C-TCTACTACC---AACAACAA---GA--ACTACACATT---GCTC--TCC---------------------TT--TATC-TGATCTCTCCTCCATAGGTATGGGGCTGCGGCGACAAGACATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................CTA--------------A---TG-GCCCAGGTG---TGTTCGTA....................................................................................................................................................................................................................................2312.002000002
.............TTCCTT---------------------------------------------------------------------------CTA--------------A---TG-GCCCAGGTG---............................................................................................................................................................................................................................................2112.002200000
........................................................................................................................................................................................................................................................................................................................................GGCGACAAGACATCACGCGAAGC...............2311.001010000
.............................................................................................................................................................................................................................................................................................................................................CAAGACATCACGCGAAGTGCA............2111.001000100
..........................................................................................................................................................................................................................................................................................................................................CGACAAGACATCACGCGAAGTGC.............2311.001001000
........................................................................................................................................................................................................................................................................................................TC-TGATCTCTCCTCCATAGGT................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................................CTGCGGCGACAAGACATCA.......................1911.001000001
..........................................................................................................................................................................................................................................................................................................................................................GAAGTGCAATTGGACATC..1811.001001000
..............TCCTT---------------------------------------------------------------------------CTA--------------A---TG-GCCCAGGTG---T...........................................................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................AAGACATCACGCGAAGTGC.............1911.001000100
...........................................................................................................................................................................................................................................................................................................................................GACAAGACATCACGCGAAGTGCA............2311.001000001
...........................................................................................................................................................................................................................................................................................................................GGTATGGGGCTGCGGCGACAAGACAT.........................2611.001100000
........................................................................................................................................................................................................................................................................................................................................GGCGACAAGACATCACGCGA..................2011.001100000
droBip1
CCACACACCT--GTTCCTT---------------------------------------------------------------------------CTA--------------A---TG-G-CCAGGTG---TGTTCGTACGATGCATT--TAATTAAAGTCTACGATTCTCCT-TACCAC-TCACAACAACA---------------------------C-TCT---ACC---AACAACAA---GA--ACTACACATT---GCTC--TCC----------------TCT--AT--CA----------TCATCCACAGGTGTGGGGCTGCGGCGACAAGACATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotal
No Reads
droKik1
-ACCACACCT--GTGCCGC---------------------------------------------------------------------------CTA--------------A---TG-G-CCAGGTGTTGTGCTCTTATGATGCATTTTTAAACCAAGTCTACGATTCTCCT-CACCCA------ACAACA-ACAACAA---CAGT------------G-TCT---ACC---AACAACAA---GA--ACTACACGTT---GCTC--TCTC---------------TCTCCCC--TTTT-GGTTT--TCCATCGCAGGTCTGGGGATGCGGCGACAAGACATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotal
No Reads
droFic1
CAGCACACCG--TTGCCTG---------------------------------------------------------------------------CTA--------------A---TG-G-CCAGGTGT-GCATTCTAGCGATGCATT--TAAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--CC-ACT-------------TCTCCTC--TCTC-CGATC--TCCTCCGCAGGTTTGGGGCTGCGGCGACAAAACATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotal
No Reads
droEle1
CAGCACACCA--GTGGCTT---------------------------------------------------------------------------TTA--------------A---TG-G-CCAGGTG---TGCTCTAGCGATGCATT--TTAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GACAACTACACGTT---GCTT--CCCG---------------CTT--TT--TCTT-TGATC--TCCTCACCAGGTCTGGGGCTGCGGCGACAAGTCATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotal
No Reads
droRho1
CAGAACACCA--GTGCCTC---------------------------------------------------------------------------CTA--------------A---TG-G-CCAGGTG---TGCTCTAGCGATGCATT--TTAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--CCC----------------TCT--TA--TTTTCTGATC-----TCCACAGGTGTGGGGCTGCGGCGACAAAACATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotal
No Reads
droBia1
CAGCACACCA--GT------------------------------------------------------------------------------------------------------G-G-GGATGTG---TGCTCTAGCGATGCATT--TAAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--ATC----------------TGT--TCCATCTT-CTATC--TCCTCCGCAGGTCTGGGGGTGCGGCGACAAGACATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotal
No Reads
droTak1
-AGCACAC-----------------------------------------------------------------------------------------------------------------------------TCTAGCGATGCATT--ATAACTAAGTCTACGATTCTCCT-CATCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--CTCC---------------TTT--TC--T-------------CTTCACAGGTCTGGGGCTGCGGCGATAAATCATCACGTGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotal
No Reads
droEug1
TCGCACACCA--GTGCCTC---------------------------------------------------------------------------TTA--------------A---TG-G-CATGGTG---TACTCTAGCGATGCAAT--TTAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCAACCACC---AACAACAA---AA--ACTTCACGTT---GCTC--CTC---------------------TT--TCTT-CGATC--TCATCCGCAGGTGTGGGGCTGCGGCGATAAAACATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotal
No Reads
dm3
CAGCACACGT--ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTGT-GTGCTCTAGCGATGCATT--TAAACTAAGTCTACGATTCTCCA-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--GCCA---------------TCT--TT--TCTT-CGATC--TCATCCGCAGGTGTGGGGCTGCGGCGACAAATCATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................CAAATCATCACGCGAAGTGCAATTGG.......26132.0032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012182000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CAAATCATCACGCGAAGTGCAATTGGA......27118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000549000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AATCATCACGCGAAGTGCAATTGGA......2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TCACGCGAAGTGCAATTGGAC.....2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000010000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCATCACGCGAAGTGCAATTGGACATC..2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................ATCACGCGAAGTGCAATTGGAC.....2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CAAATCATCACGCGAAGTGCA............2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................AATCATCACGCGAAGTGCAATTGG.......2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACAAATCATCACGCGAAGTGC.............2114.0040000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................ATCACGCGAAGTGCAATTGGA......2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................CTGCGGCGACAAATCATCACG.....................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000100000
.............................................................................................................................................................................................................................................................................................................................................CAAATCATCACGCGAAGTGCAATT.........2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ACGCGAAGTGCAATTGGACATC..2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TGTGGGGCTGCGGCGACAAAT............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
....................................................................................................................................................................................................................................................................................................................................CTGCGGCGACAAATCATCAC......................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTGT-.............................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CATCACGCGAAGTGCAATTGG.......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................GGTGTGGGGCTGCGGCGACAA..............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TAAACTAAGTCTACGATTCTC....................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCATCACGCGAAGTGCAATTGGACA....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................CATCCGCAGGTGTGGGGCTGC......................................2112.0020000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................................................................................................................CGCGAAGTGCAATTGGACATC..2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................TCACGCGAAGTGCAATTGGA......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ACGCGAAGTGCAATTGGACAT...2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000
.................TC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTGT-GTGC.........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CAA--------------A---TG-G-CCAGGTGT-GTGCTC.......................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010
..................C---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTGT-GTG..........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................T-GTGCTCTAGCGATGCATT--TA.......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTT-CGATC--TCATCCGCAGGTG...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GGGGCTGCGGCGACAAAT............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GACAAATCATCACGCGAAGTGCAATTG........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AAATCATCACGCGAAGTGCAATTGGAC.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GACAAATCATCACGCGAAGTG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CAA---GA--ACTACACGTT---GCTC--G...................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................CAA---GA--ACTACACGTT---GCTC--GC..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TCACGCGAAGTGCAATTGGACATCA.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................C--GCCA---------------TCT--TT--TCTT-CGATC--TC..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TCATCCGCAGGTGTGGGGT.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GTGTGGGGCTGCGGCGACA...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GCGGCGACAAATCATCACGCGAAGT...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACAAATCATCACGCGAAGTGCAATT.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ATCATCACGCGAAGTGCAATTGGAC.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ACGCGAAGTGCAATTGGA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GACAAATCATCACGCGAAGTGCAAT..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................GAAGTGCAATTGGACATCAA2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ATCATCACGCGAAGTGCAATTGGACA....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................ATCACGCGAAGTGCAATTGGACATC..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................ACAACAA---GA--ACTACACGT..............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................T--TCTT-CGATC--TCATCCGCAGG.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CAAATCATCACGCGAAGTGCAATTG........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CGACAAATCATCACGCGAAGTGCA............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACAAATCATCACGCGAAGTGCA............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AATCATCACGCGAAGTGCAATTGGAC.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................TCACGCGAAGTGCAATTGGACATCAA2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................................................................................................................................................................................................................TGTGGGGCTGCGGCGACAAATCAT.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................A---------------------------G-TCA---ACC---AACAACAA---GA--A......................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TCTCCA-TACCCA------ACAACA---------------------------G-TC................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................ACAA---GA--ACTACACGTT---GCTC--G...................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TT-CGATC--TCATCCGCAGGTGT..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCTT-CGATC--TCATCCGCAG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AGGTGTGGGGCTGCGGCGACAAA.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTT-CGATC--TCATCCGCAG..................................................1811.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CACGTT---GCTC--GCCA---------------TCT--TT--T.......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CACGT--ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CC....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CGATC--TCATCCGCAGGTGTGG............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AATCATCACGCGAAGTGCAA...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CGACAAATCATCACGCGAAG................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................CATCACGCGAAGTGCAATTGGT......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................AGGTGT-GTGCTCTAGCGA.................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................C---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTGT-GTGCTT.......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AGGTGTGGGGCTGCGGCGA.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................GAAGTGCAATTGGACATCA.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GGCGACAAATCATCACGCGAA.................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CATCCGCAGGTGTGGGGC.........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AATCATCACGCGAAGTGCAATTGGACA....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GATC--TCATCCGCAGGTGTGGGG..........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..............................................................................................................................................................................................................................................................................................CT--TT--TCTT-CGATC--TCATCCGC....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AACA---------------------------G-TCA---ACC---AACAACAA---G..........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTG...............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CATCACACGT--ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTGT-GTGCTCTAGCGATGCATT--TAAACTAAGTCTACGATTCTCCA-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--GCCA---------------TCT--TT--TCTT-CGATC--TCATCCGCAGGTGTGGGGCTGCGGCGACAAATCATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............TGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTGT-GTGCTCTA.....................................................................................................................................................................................................................................2912.00220000000000000000
......................................................................................................................................................................................................................................................................................................................................................ACGCGAAGTGCAATTGGACAT...2112.00211000000000000000
..................................................................................................................................................................................................................................................................................................................................................CATCACGCGAAGTGCAATTGGAC.....2312.00202000000000000000
....................................................................................................................................................................................................................................................................................................................................................TCACGCGAAGTGCAATTGGAC.....2111.00101000000000000000
............................................................................................................................................ATGCATT--TAAACTAAGTCTACG..........................................................................................................................................................................................................2211.00100000100000000000
...................................................................................................................................................................................................................................................................................................................................................ATCACGCGAAGTGCAATTGGAC.....2211.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................TGCGGCGACAAATCATC........................1711.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................CACGCGAAGTGCAATTGGA......1911.00101000000000000000
........................................................................................................................................................................................................................................AACAACAA---GA--ACTACACGTT---GC........................................................................................................2211.00100001000000000000
.......................................................................................................................................................AACTAAGTCTACGATTCTCCA-.................................................................................................................................................................................................2111.00100001000000000000
..........................................................................................................................................................................................................................................................................................................................................CGACAAATCATCACGCGAA.................1911.00100001000000000000
..........................................................................................................................................................TAAGTCTACGATTCTCCA-TACCCA------ACAAC................................................................................................................................................................................2911.00100000000000010000
..........................................................................................................................................CGATGCATT--TAAACTAAGTCT.............................................................................................................................................................................................................2111.00101000000000000000
..................................................................................................................................................T--TAAACTAAGTCTACGATTCT.....................................................................................................................................................................................................2111.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CGCGAAGTGCAATTGGACATC..2111.00110000000000000000
...............................................................................................................................................................................................................................................................................................................C--TCATCCGCAGGTGTGGGGCTT.......................................2211.00110000000000000000
...........................................................................................................................................GATGCATT--TAAACTAAGTCTACG..........................................................................................................................................................................................................2311.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................GGTGTGGGGCTGCGGCGACAAATCATCA.......................2811.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................ACGCGAAGTGCAATTGGAC.....1911.00110000000000000000
...................................................................................................................................................................................................................................................................................................................CATCCGCAGGTGTGGGGCTG.......................................2011.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................GAAGTGCAATTGGAC.....1520.50100000010000000000
droSec2
CAGCACACGT--ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTGT-GTGCTCTAGCGATGCATT--TAAACTAAGTCTACGATTCTCCA-TACCCA------ACAATA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--GCCA---------------TCT--TT--TCTT-CGATC--TCATCCGCAGGTGTGGGGCTGCGGCGACAAATCATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................TCATCACGCGAAGTGCAATTGGA......2311.0010010
..................................................................................................................................................................................................................................................................................................TT--TCTT-CGATC--TCATCCGCAG..................................................2111.0011000
.........................................................................................................................................................................................................................................................................................................................................................CGAAGTGCAATTGGACATCA.2011.0010001
.....................................................................................................................................................................................................................................................................................................................................................CACGCGAAGTGCAATTGGAC.....2011.0011000
...................................................................................................................................................................................................................................................................................................T--TCTT-CGATC--TCATCCGCAGG.................................................2111.0010100
.............................................................................................................................TGT-GTGCTCTAGCGATGCATT--.........................................................................................................................................................................................................................2111.0011000
droYak3
CAGCACACTT--ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTG---TGCTCTAGCGATGTATT--TAAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------A-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTA--CCCA---------------TCT--TC--TTTT-CGATC--TTATCCGCAGGTGTGGGGCTGCGGCGACAAAACATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................CATCACGCGAAGTGCAATTGGAC.....2311.00110000000000
...................................................................................................................................................................................................................................................................................................................................................ATCACGCGAAGTGCAATTGGAC.....2211.00100000100000
................................................................................................................................................................................................................................................................................................................................................AACATCACGCGAAGTGCAATT.........2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................CAAAACATCACGCGAAGTGCAATTGGA......2711.00100000010000
droEre2
CAGCACACTT--ATGGCTC---------------------------------------------------------------------------CAA--------------A---TG-G-CCAGGTG---TGCTCTAGCGATGTATT--TAAACTAAGTCTACGATTCTCCT-TACCCA------ACAACA---------------------------G-TCA---ACC---AACAACAA---GA--ACTACACGTT---GCTC--CCCA---------------TCT--TC--TATT-CGATC--TTATCCGCAGGTGTGGGGCTGCGGCGACAAAACATCACGCGAAGTGCAATTGGACATCAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................CAACAA---GA--ACTACACGTT---GCT.......................................................................................................2111.0010000100
.............................................................................................................................................................................................................................CA---ACC---AACAACAA---GA--ACTACACGTT---G.........................................................................................................2611.0010000010
...............................................................................................................................................................................................................................................................................................................................................AAACATCACGCGAAGTGCAATTGGAC.....2611.0011000000
.............................................................................................................................................................................................................................................................................................................................................CAAAACATCACGCGAAGTGCA............2111.0010000010
...........................................................................................................................................................................................................................................................................................................CGATC--TTATCCGCAGGTGTGG............................................2111.0011000000
...................................................................................................................................................................................................................................................................................................................................GCTGCGGCGACAAAACATCACGC....................2311.0010100000
.....................................................................................................................................................................................................................................................................................................................TCCGCAGGTGTGGGGCTGCT.....................................2011.0010000100
......................................................................................................................................................................................................................................................................................................................................................ACGCGAAGTGCAATTGGACATC..2211.0010000100

Generated: 05/19/2015 at 11:20 AM