ID:

dvi_15991

 Coordinate:

scaffold_13047:8203630-8203780 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.6 -15.4 -15.4

Flybase annnotation

CDS [Dvir\GJ24064-cds]; exon [dvir_GLEANR_9372:3]; intron [Dvir\GJ24064-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAAAGTCAAGAAAATAAAATGCGAGTGTACAAACTTGAATTTATATTCAGCTGAGCTTTCTGAGAAATTATCAATTAATTAGTTGAATCAATTGAAAAGAGTTTCCTGCCTAACATAATTTGATAATCAACCAACGCTGCAATTTATCCAAGTATATGTATATTATATTATCAATGAGCACTATCTGCTTTCACCATTAGGTTATAAACTCAGCAGCCAAGACATTTTACATGTCTGCTGGCGCCGTCAA
**************************************************((.(((..((((....((((.((((((....))))))...))))....)))).)))..))...((((((((((((((.................)))).))))).)))))................(((((.....)))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060667
160_females_carcasses_total
 M047
female body
 SRR060668
160x9_males_carcasses_total
 V047
embryo
 SRR060669
160x9_females_carcasses_total
 SRR060679
140x9_testes_total
 M061
embryo
 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060670
9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060683
160_testes_total
 V053
head
 SRR060678
9x140_testes_total
.......................................................................................................................................................................................................ATGTTATAAACTCAGCAGCCAA.............................. 22 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CATGTTATAAACTCAGCAGCCAA.............................. 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..AAAGTCAAGAAAATAAAATGC.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CTCAGCAGCCAAGACATTTTA..................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ACATGTCTGCCGGTGCCGTCA. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........GAAAATAAAATGCGAGTGTACAAACT....................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AACTCAGCAGCCAAGACATTTTACAT.................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AACTCAGCAGCCAAGACCTTTTACA................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ATTTTACATGTCTGCTGGCGCCGT... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................ATAAACTCAGCAGCCAAGAC........................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CTCAGCAGCCAAGACATTTTACATGT................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ATTTTACATGTCTGCTGGCGC...... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AACTCAGCAGCCAAGACATT........................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GATCATGTTATAAACTCAGCAGC................................. 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............AAATAAAATGCGAGTGTACAAACT....................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCCAAGACATTTTACATGTCTGCT........... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTTATAAACTCAGCAGCCA............................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CGAGACATTTTTCATGTCTCCT........... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................................ATTTTACATGTCTGCTGGCGCC..... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................TTTTACATGTCTGCTGGCGCC..... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGTCTGCTGGCGCCGTCAA 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................ACTCAGCAGCCAAGACATTTTACA................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................ATCATGTTATAAACTCAGCAGCCAAGA............................ 27 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AACTCAGCAGCCAAGACATTTTACA................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TCATGTTATAAACTCAGCAGCCAAGAC........................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TAATTTGATAATCAACCAAC................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTAAACTCAGCTACCAAGACA.......................... 21 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TAACATGTTTGGATAATCAAC....................................................................................................................... 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................GAGCTTTCTGAAAAATTT.................................................................................................................................................................................... 18 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................AAAATATGGTAATCAACCA..................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTTTTCAGTTCTTTTATTTTACGCTCACATGTTTGAACTTAAATATAAGTCGACTCGAAAGACTCTTTAATAGTTAATTAATCAACTTAGTTAACTTTTCTCAAAGGACGGATTGTATTAAACTATTAGTTGGTTGCGACGTTAAATAGGTTCATATACATATAATATAATAGTTACTCGTGATAGACGAAAGTGGTAATCCAATATTTGAGTCGTCGGTTCTGTAAAATGTACAGACGACCGCGGCAGTT
**************************************************((.(((..((((....((((.((((((....))))))...))))....)))).)))..))...((((((((((((((.................)))).))))).)))))................(((((.....)))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060667
160_females_carcasses_total
 GSM1528803
follicle cells		 M047
female body
 SRR060679
140x9_testes_total
..........................................................................................................................................................TATGCAAATAATAGAATAGTTA........................................................................... 22 3 3 0.33 1 1 0 0 0
.........................................................................................................................................................................................GACGAAAGTGGGCATCCAG............................................... 19 3 6 0.17 1 0 1 0 0
.................................................................................................................................................................................................................................AGAACGTACAGACTACCGCG...... 20 3 11 0.09 1 0 0 1 0
.......................................................................................................................AAAGTATTCGTTGGTTGCGG................................................................................................................ 20 3 19 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:8203580-8203830 + dvi_15991 AAA-----AA--G--------------TCAAGAAAATAAAATGCGAG---T---GTA-----CAAACT------TGAATTTATAT-TCAGCT--GAGCTTTCTG-AGAA----------------ATTA--TCA--ATTAATTAGTTGAATCAATTGAAAA--------------------------------------------GAGTT-------------------------------------------------------------------------------TCCTGCCTAACATAATTTGATAATCAACC-AAC---------------------------------------------GCTGCA----------------------------------------------------------------A------------TTT------------ATCCAAGTATATGTATATTAT-----------------ATTA-------------TCAA--------------------------------TGAGCAC-T-----------------------------------------------ATCTGCT------TT--CACCATTAGGTTATAAACTCAGCAGCCAAGACATTTTACATGTCTGCTGGCGCCGTCAA
droMoj3 scaffold_6540:27987440-27987630 - TAA-----GA--G--------------CG-AATAAATAAAATGCGAG---T---GTA-----CAAACT------TGAATTGATAT--GAACTGAT--CATGAATG---A----------------TAAATC-------------------------------------------------------------------------------------TGTATCCCTCACTGTCTCTCTCACTT--AAGTT------TATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAT---------G-------------------------A-------ATAT---T---------------TA------ATA----------------------------------------------TCCTTGCT------TT--TGCCTTTAGGTCATCAATTCAGCCGCCAAGACATTTTACATGTCCGCAGGAGCCGTCAA
droGri2 scaffold_15074:1407662-1407936 - AAA-----AA--G--------------TGAATACAATAAAATGTGCGACAA---ACA-----ACAACT------TGAATTGATAT-CCAGTT--GAACTTTG------------------------------CTAA-----------------ATTGAATACTAATCCAACTCTAAATTTGGTAAGCATGATAAAGAAAAATGTATAATTGGAT--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATATGCAAATGAT-----------------AGTT-------------TCGG--------------------------------CAAGGAT-TATTCGATTGACTTTTCAAGACTGGTCCGGGCACATTAAAATATTAA-ATTG------AATCC--CATTTGTAGGTCATCAACTCAGCCGCAAAGACATTTTATATGTCTGCAGGTGCCGTAAA
droWil2 scf2_1100000004902:5462299-5462485 + AGT-----TG------------------GCCCCAAATAAAA---------A---CTCTAAGGTTAACT------TAAATTGGTCTATGGC----TAGAA--AAGGAAGGGGAGCATTGAGGAGGAGGACAAATA-------------------GGGGTCTA--------------------------------------------GATTTAATT--TGCATCTATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAA-ATTTA--------TT--TCCATTTAGATCATTAATTCGGCAGCCAAGACCTTCTACATGTCGGCTGGCGCTGTTAA
dp5 2:8683216-8683428 + AG-------------------------TTTAACCAATAAAATGCACA--TC---GTA-----TTAACT------TGAAATGGACA-TCAGAT--CAGCTTCAGGGAGGA----------------GGCATC----------------------ACCCATCA------------------------------------------------------C------------------------------------------------------------------------------------ACCATTAGA-----GACC-CAC---------------------------------------------GATACA----------------------------------------------------------------A------------TCCCCGATT-----------------------------CCCAGTAGTCCTTAAATAA-------------TTGA-------AAAC---A---------------TA------A-A----------------------------------------------TTTTCCCT------GC--CATCATCAGATCATCAACTCGGCTGCCAAGACCTTTTACATGTCCGCTGGCGCCGTCAA
droPer2 scaffold_0:2496658-2496872 + AG-------------------------TTTAACCAATAAAATGCACA--TC---GTA-----TTAACT------TGAAATTGGACATCAGAT--CAGCTGCAGGGAAGA----------------GGATTCATC-------------------ACCCATCA------------------------------------------------------C------------------------------------------------------------------------------------ACCTTTAGA-----GACC-CAC---------------------------------------------GATACA----------------------------------------------------------------A------------TCCCCGATT-----------------------------CCCAGTAGTCCTTAAATAA-------------TTGA-------AAACA--------------------------A-T----------------------------------------------TTTTTCCT------GC--CATCATCAGATCATCAACTCGGCTGCCAAGACCTTTTACATGTCCGCAGGCGCCGTCAA
droAna3 scaffold_12911:3997769-3997929 + GAG-----AA-----------ATAAAATGTATTA-CT-------GAC--TT---GTA-----TAAGCT------TGAATTGGTGCATTGG----AAGTTAGAGGGCACGGC--------------AGCACC--T-------------------CTCGAATC--------------------------------------------TA-----AA--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT-----------------------------------------------------------------------------A-T----------------------------------------------TTTTTACT-------A--CTTCGTTAGATCATCAACTCCGCCGCCAAGACTTTCTACATGTCTGCCGGTGCCGTCAA
droBip1 scf7180000396640:845640-845803 + AGA-----G----------CAATAAAATGTATTAACT-------GAC--TT---GTA-----AACACT------TGAATTGGTACATCGG----CAGTAGCAGGGCACG----------------GAAACACAT-------------------GTCGAATA--------------------------------------------TT-----CA--TTTTTT-------------------------------------------------------------------------------TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACT-------A--TTTAATTAGATCATCAACTCGGCCGCCAAGACCTTCTACATGTCGGCTGGTGCCGTCAA
droKik1 scf7180000302810:342857-343027 - GAG-----TC-GAGAAG-----AG------GAAGAATAAAATGCGAC---T---GTA-----TTAACTTGATCTTGAATTGGTGTATTAG----C------------CA----------------GGCATCGAAAA-----------------ACTGATTGCTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTA----------------------------------------------------------------A------------TCCCCGAT----------------------------------------------------------------------------------------------------------------------------------------------T-----------GTTT-------CCCC--TCAAACTAGATCATCAACTCGGCCGCCAAGACATTCTACATGTCCGCCGGCGCCGTCAA
droFic1 scf7180000453776:234241-234425 + AAG-----AA-----------GTGGAGTTTAAACAATAAAGTGCGAA--CT---GTA-----TTAAGT------TGAATTGTAGAATTGG----CAGTTAGAGGGAGGA----------------TCA-TA--C-------------------AA----CA--------------------------------------------AATA-------AACATCCCATA-------TACCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT--------------------------------------------------------------------------------------------------------------------AA--T-----------------------------ATAATTTT------------------ATAATCCC--CGATCCTAGATCATCAACTCCGCCGCCAAGACATTTTACATGTCCGCCGGTGCAGTGAA
droEle1 scf7180000491280:1117878-1118264 + GAG-------ACGGAAGTAGAGCGGAG-ATAAAAAATAAAGTGCGAC--TT---GTA-----TTAACT------TGGATTGGGGAATCGA----C---TTGAATTAGCA----------------GGAACTAAC-------------------TT--AA----------------------------------------------------------------------------------------------------CAGATCTGTTACTGATTTTAGAAAAAGTCATTATACCTATCATCATGTGGT-----TCC-TATCAATAAGATAAGATCATTTTTATCTTCATAGCAATGACACATTATTTTATAATCCCTGAAATTAGATCATCAATGGATAGGCA--ATTAGATCATTTACCCATCATCATATGTTTCCTATTAACAAGATCATTTA-----------------------------TTT---------AT-----------------------------------AATTTTTATCTTCATAACAATG-AAA--C-----------------------------TTTATTTT------------------ATTATCCC--CGAAATTAGATTATCAACTCGGCAGCCAAGACATTTTACATGTCCGCCGGTGCTGTGAA
droRho1 scf7180000778154:5359-5591 + GAG-------ACGGAAGTAGAGCAGTGTTTAACCAATAAAGTGCGAC--TT---GTA-----TTAACT------TGAATTGGCGAGATTG----CAGTTAGAGGGAGG-------------------ATTTAAT-------------------AATGACCA--------------------------------------------TTTTTAACTT-TGAACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATCATTTTATTCCTTGTAATACAGTCATGGT-----------------------------TTT---------TC------------------------------------------------------ATG-AAA--T-----------------------------ATTCTTTT------------------ATAATACC--CCGTATTAGATCATTAACTCGGCGGCCAAGACCTTCTATATGTCCGCGGGTGCCGTGAA
droBia1 scf7180000302136:3208717-3208955 - GAACGTCGAGACGGAGATGGAGTGGAGTGTAACCAATAAAGTCCGAC--TT---GTA-----TTAGCT------TGAATTGGTGCATTGG----CAGTTTGAGGGAGGA----------------GGCATCCAC-------------------ATTGACCC--------------------------------------------GATTATCCT--TACACT-------------------------------------------------------------------------------TAT----------------------------------------------------------------------------------------------------------------------------C---------CTTATAATCTAG----------ACTTTTCGCAACCATATGCATATGGA------------------------------------------------------------------------------T----------------------------------------------TTTTCATTGTAATACC--CAACCTTAGATTATCAACTCTGCCGCCAAGACCTTCTATATGTCTGCCGGTGCCGTGAA
droTak1 scf7180000415310:185103-185363 + GAG-------ACGGAAGTGGAGCGGAGTGTAACAAATAAAGTGCGAC--TT---GTA-----TTAACT------TGAATTGGCGAATGAG----CGGTTTCAGGGAGGA----------------GGCATTTGA-------------------ATTAAACA--------------------------------------------GAATCAACAG-AA-----------------------------------------CATA-----------------AAATAGTTATTATACCCATTATCATTGGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------TCCCATCCATAAT-------------------GT--------------------------------GAACAATT-----TTTCATTTAAACT-AAACT-T-------------------------------A---------------TC---TTGTTTTACCATAAACCCTAGATCATCAACTCGGCCGCCAAGACCTTCTACATGTCCGCTGGTGCCGTAAA
droEug1 scf7180000409787:635625-635926 - GAG-------GTGGAAGTGAAGCTGAGTGTTAAAAATAAAGTGCGAC--TTAAAGTA-----TTAATT------TGATTTGCT-ATTAGA----CAGTTAGTGGGAGCG----------------AGGATTCAC-------------------TTCAAACA--------------------------------------------GGTTCTACA-T------------------------------------------------------------------------------------ACCTTTAAA-----AACTTCAT---------------------------------------------TATTTT----------------------------GGCCTC----------------ATAAATTTTTTAAGTT-------------CCCTATT-----------------------------CCCATAAGTTCATTATTAAACAAAGGGTTCCCTTGATAAACGATAAATATT-----TCCCAAATATAAT-AGAAA-T----------------------------------------------CTCTTATT------GC--AATCTTCAGATCATAAACTCGGCCGCCAAGACCTTTTACATGTCCGCTGGTGCCGTCAA
dm3 chr3R:24940634-24940865 + AGA-----A-------------AGGAGTGCATCAAATAAAG---------C---GTA-----TTAACT------TGAATTGGCGAATTTG----CAGTTTGATGGAACA----------------GGCATCCAC-------------------ACTGAGCA--------------------------------------------TTATTTTCA--TTCATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--TCACTTTATTATT------------TCTAAGTCATATTACACATTCATAATAATATGGATT---------GCT------------------------------------------------------AAA-ATA--T-----------------------------ATCCCTTT------------------AAAATTTC--AAATCTTAGATCATCAACTCGGCGGCCAAGACCTTCTACATGTCTGCCGGTGCCGTCAA
droSim2 3r:24300603-24300837 + dsi_18420 AGA-----A-------------AGGAGTGCATCAAATAAAG---------C---GTA-----TTAACT------TGAATTGGCGAATTTG----CAGTTTGAGGGTGCA----------------GGCATCCAC-------------------ACTAAGCA--------------------------------------------ATATTACATT-TGCATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACACTTTATGATT------------CCTAATACATATTCCACATTCATAATAATATGGAGT---------GCT------------------------------------------------------AAA-ATC--T-----------------------------ATCCCTTT------------------AAAATTCC--AAACCTTAGATCATCAACTCGGCGGCCAAGACCTTCTACATGTCCGCCGGCGCCGTCAA
droSec2 scaffold_4:3805395-3805640 + TCA-----AGACGGAAC-AGATAGGA-TGCATCAAATAAAG---------C---GTA-----TTAACT------TGAATTGGCGAATTTG----CAGTTTGAGGGTGCA----------------GGCATCCAC-------------------ACTAAGCA--------------------------------------------TTATTACATT-TGCATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACACTTTATGATT------------CCTGATACATATTCGACATTCATAATAAAATGGAGT---------GCT------------------------------------------------------AAA-ATC--T-----------------------------ATCCCTTT------------------AAAATTCC--AAACCTTAGATCATCAACTCGGCGGCCAAGACCTTTTACATGTCCGCCGGCGCCGTCAA
droYak3 3R:21557526-21557728 - GAT-------ATGGAAG-ACACCGGAGTGCATCAAATAAAG---------C---GTA-----TTAACT------TGAATTGGTGAATTTG----CAGTTGAAGGCAGCA------------------------------------------------------------------------------------------------TTATTACATA-TACATCT-----------TAACACTTTCATGATTTACTTTATA----------------------------------------------------------C-TAT---------------------------------------------GTTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--T-----------------------------ATCCGTTT------------------AAAAATCC--AAACCTTAGATAATCAACTCCGCGGCCAAGACCTTCTACATGTCCGCCGGCGCCGTCAA
droEre2 scaffold_4820:3090886-3091088 - AT--------ACGGAAG-ACAACGGAGTGCATCAAATAAAG---------C---GTG-----TTAACT------TGAATTGGTGAATTTG----CAGTTAAAGG----A----------------GGCATCCAC-------------------ACTAAGCA--------------------------------------------TTATTACATT-TACATA------------TAACACTT--ATGAT------TATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGT---------GTT------------------------------------------------------A----------------------------------------CTGTTT------------------AAAAATCC--ACACCTTAGATAATCAACTCGGCGGCCAAGACCTTCTACATGTCCGCAGGCGCCGTCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AAA-----AA--G--------------TCAAGAAAATAAAATGCGAG---T---GTA-----CAAACT------TGAATTTATAT-TCAGCT--GAGCTTTCTG-AGAA----------------ATTA--TCA--ATTAATTAGTTGAATCAATTGAAAA--------------------------------------------GAGTT-------------------------------------------------------------------------------TCCTGCCTAACATAATTTGATAATCAACC-AAC---------------------------------------------GCTGCA----------------------------------------------------------------A------------TTT------------ATCCAAGTATATGTATATTAT-----------------ATTA-------------TCAA--------------------------------TGAGCAC-T-----------------------------------------------ATCTGCT------TT--CACCATTAGGTTATAAACTCAGCAGCCAAGACATTTTACATGTCTGCTGGCGCCGTCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..A-----AA--G--------------TCAAGAAAATAAAATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCAGCCAAGACATTTTA.....................2111.001000000000000000001000000000000000000000000000000000000000000000
...............................GAAAATAAAATGCGAG---T---GTA-----CAAACT------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCAGCAGCCAAGACATTTTACAT..................2611.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTACATGTCTGCTGGCGCCGT...2411.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACTCAGCAGCCAAGAC...........................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCAGCCAAGACATTTTACATGT................2611.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTACATGTCTGCTGGCGC......2111.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCAGCAGCCAAGACATT........................2011.001000000000000000000010000000000000000000000000000000000000000000
.................................AAATAAAATGCGAG---T---GTA-----CAAACT------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGACATTTTACATGTCTGCT...........2411.001000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAAACTCAGCAGCCA...............................1911.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTACATGTCTGCTGGCGCC.....2211.001000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACATGTCTGCTGGCGCC.....2111.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGCTGGCGCCGTCAA1911.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCAGCAGCCAAGACATTTTACA...................2411.001000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCAGCAGCCAAGACATTTTACA...................2511.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TAATTTGATAATCAACC-AAC---------------------------------------------.................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TAA-----GA--G--------------CG-AATAAATAAAATGCGAG---T---GTA-----CAAACT------TGAATTGATAT--GAACTGAT--CATGAATG---A----------------TAAATC-------------------------------------------------------------------------------------TGTATCCCTCACTGTCTCTCTCACTT--AAGTT------TATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAT---------G-------------------------A-------ATAT---T---------------TA------ATA----------------------------------------------TCCTTGCT------TT--TGCCTTTAGGTCATCAATTCAGCCGCCAAGACATTTTACATGTCCGCAGGAGCCGTCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTACATGTCCGCAGGAGCC.....2212.002100001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTACATGTCCGCAGGA........1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTACATGTCCGCAGGAGCCGT...2411.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTACATGTCCGCAGGAGCCGT...2511.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTTACATGTCCGCAGGAGCC.....2411.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTACATGTCCGCAGGAGCCGTCA.2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---T---------------TA------ATA----------------------------------------------TCCTTGCT------TT--TGCCTTTAG..................................................2711.001100000
...............................ATAAATAAAATGCGAG---T---GTA-----CAAACT------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
droGri2
AAA-----AA--G--------------TGAATACAATAAAATGTGCGACAA---ACA-----ACAACT------TGAATTGATAT-CCAGTT--GAACTTTG------------------------------CTAA-----------------ATTGAATACTAATCCAACTCTAAATTTGGTAAGCATGATAAAGAAAAATGTATAATTGGAT--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATATGCAAATGAT-----------------AGTT-------------TCGG--------------------------------CAAGGAT-TATTCGATTGACTTTTCAAGACTGGTCCGGGCACATTAAAATATTAA-ATTG------AATCC--CATTTGTAGGTCATCAACTCAGCCGCAAAGACATTTTATATGTCTGCAGGTGCCGTAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AGT-----TG------------------GCCCCAAATAAAA---------A---CTCTAAGGTTAACT------TAAATTGGTCTATGGC----TAGAA--AAGGAAGGGGAGCATTGAGGAGGAGGACAAATA-------------------GGGGTCTA--------------------------------------------GATTTAATT--TGCATCTATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAA-ATTTA--------TT--TCCATTTAGATCATTAATTCGGCAGCCAAGACCTTCTACATGTCGGCTGGCGCTGTTAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATGTCGGCTGGCGCT.....1916.00613020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTACATGTCGGCTGGCGCTGTT..2514.00401210
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACCTTCTACATGTCGGCTGGC........2512.00200020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGACCTTCTACATGTCGGCT...........2312.00200020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACATGTCGGCTGGCGC......1912.00210010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTCTACATGTCGGCT...........1812.00220000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACCTTCTACATGTCGGC............2111.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACATGTCGGCTGGCGCTGTT..2311.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATGTCGGCTGGCGC......1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACCTTCTACATGTCGGCTGGC........2411.00100010
...................................................................................CTATGGC----TAGAA--AAGGAAGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCGGCAGCCAAGACCTTCTAC....................2411.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATGTCGGCTGGCGCTG....2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATGTCGGCTGGCGCTGT...2111.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACATGTCGGCTGGCGCTGTTA.2511.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACCTTCTACATGTCGGCTGGCGC......2711.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACATGTCGGCTGGC........1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTAATTCGGCAGCCAAG.............................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTTCTACATGTCGGCTGGCGCT.....2611.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTCTACATGTCGGCTGGCGCTGTT..2611.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACCTTCTACATGTCGGCT...........2211.00101000
................................................................................GGTCTATGGC----TAGAA--AAGGAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACATGTCGGCTGGCGCTGTTAA2611.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGTCGGCTGGCGCTG....1811.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTCTACATGTCGGCTGGC........2011.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACATGTCGGCTGGCGCTGTT..2411.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCGGCTGGCGCTGT...1811.00100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGACCTTCTACATG.................1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACCTTCTACATGTCGGCT...........2111.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTCTACATGTCGGCTGGCG.......2211.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACATGTCGGCTGGCGCT.....2111.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAATTCGGCAGCCAAGACC..........................2111.00100010
dp5
AG-------------------------TTTAACCAATAAAATGCACA--TC---GTA-----TTAACT------TGAAATGGACA-TCAGAT--CAGCTTCAGGGAGGA----------------GGCATC----------------------ACCCATCA------------------------------------------------------C------------------------------------------------------------------------------------ACCATTAGA-----GACC-CAC---------------------------------------------GATACA----------------------------------------------------------------A------------TCCCCGATT-----------------------------CCCAGTAGTCCTTAAATAA-------------TTGA-------AAAC---A---------------TA------A-A----------------------------------------------TTTTCCCT------GC--CATCATCAGATCATCAACTCGGCTGCCAAGACCTTTTACATGTCCGCTGGCGCCGTCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACTCGGCTGCCAAGACC..........................2116.0060302010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAACTCGGCTGCCAAGACC..........................2315.0050201010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTCGGCTGCCAAGACC..........................2013.0030003000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGCTGCCAAGACCTTTTACA...................2413.0030300000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCGCTGGCGCCGTC..1913.0030000021000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACATGTCCGCTGGCGCC.....2112.0020101000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGTCCGCTGGCGCCGTC..2012.0020001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGCTGGCGCCGTCA.1912.0020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGGCTGCCAAGACCTTTTACAT..................2612.0020101000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACTCGGCTGCCAAGACC..........................2212.0020110000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACATGTCCGCTGGCG.......1912.0020010010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTTTACATGTCCGCTGGC........2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACTCGGCTGCCAAGACCT.........................2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCGCTGGCGCCGTCAA2111.0010001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGGCTGCCAAGACCTTTTACA...................2511.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACATGTCCGCTGGCGC......1911.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTACATGTCCGCTGGCGCC.....2211.0010000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAACTCGGCTGCCAAGAC...........................2311.0010000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTACATGTCCGCTGGCGCCGTC..2511.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACATGTCCGCTGGCGCCGTC..2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGCTGCCAAGACCTTTTAC....................2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGCTGGCGCCGTC..1811.0010000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACCTTTTACATGTCCGCT...........2211.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGGCTGCCAAGACCTTT.......................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACTCGGCTGCCAAGACCT.........................2211.0010000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCCAAGACCTTTTACA...................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTCGGCTGCCAAGACCT.........................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGCTGCCAAGACCT.........................1811.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGCTGCCAAGACCTT........................1911.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTCGGCTGCCAAGACCTTTTA.....................2511.0010001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACATGTCCGCTGGCG.......1811.0011000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACATGTCCGCTGGCGCC.....1911.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGCTGCCAAGACCTTTTA.....................2211.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATGTCCGCTGGCGCC.....1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAACTCGGCTGCCAAGACC..........................2411.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTTACATGTCCGCTGGCGCC.....2311.0010000010000
droPer2
AG-------------------------TTTAACCAATAAAATGCACA--TC---GTA-----TTAACT------TGAAATTGGACATCAGAT--CAGCTGCAGGGAAGA----------------GGATTCATC-------------------ACCCATCA------------------------------------------------------C------------------------------------------------------------------------------------ACCTTTAGA-----GACC-CAC---------------------------------------------GATACA----------------------------------------------------------------A------------TCCCCGATT-----------------------------CCCAGTAGTCCTTAAATAA-------------TTGA-------AAACA--------------------------A-T----------------------------------------------TTTTTCCT------GC--CATCATCAGATCATCAACTCGGCTGCCAAGACCTTTTACATGTCCGCAGGCGCCGTCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACTCGGCTGCCAAGACCT.........................2213.003300000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAACTCGGCTGCC................................1813.003300000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACTCGGCTGCCAAGAC...........................2013.003201000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTCGGCTGCCAAGACCTTTTACATGT................2913.003300000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTGCCAAGACCTTTTACA...................2112.002020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTCGGCTGCCAAGACC..........................2012.002010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACTCGGCTGCCAAGACC..........................2212.002200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACTCGGCTGCCAAGACCT.........................2312.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTCGGCTGCCAAGACC..........................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAACTCGGCTGCCAAGACC..........................2311.001010000
........................................ATGCACA--TC---GTA-----TTAACT------TG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAACTCGGCTGCCAA..............................2011.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACTCGGCTGCCAAG.............................1811.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTCGGCTGCCAAGACCTTTTACAT..................2711.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGTCCGCAGGCGCCG....1811.001000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGTCCGCAGGCGCCGT...1911.001001000
..............................AACCAATAAAATGCACA--TC---GT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTTACATGTCCGCAGGCGC......2411.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTCGGCTGCCAAGACCTTTTACA...................2711.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTCGGCTGCCAAGACCTTTTAC....................2511.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGGCTGCCAAGACC..........................1811.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTCGGCTGCCAAGAC...........................1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAACTCGGCTGCCAA..............................1911.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTCGGCTGCCAAGACCT.........................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGCTGCCAAGACCTTTTACA...................2411.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCAAGACCTTTTACAT..................2011.001010000
droAna3
GAG-----AA-----------ATAAAATGTATTA-CT-------GAC--TT---GTA-----TAAGCT------TGAATTGGTGCATTGG----AAGTTAGAGGGCACGGC--------------AGCACC--T-------------------CTCGAATC--------------------------------------------TA-----AA--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT-----------------------------------------------------------------------------A-T----------------------------------------------TTTTTACT-------A--CTTCGTTAGATCATCAACTCCGCCGCCAAGACTTTCTACATGTCTGCCGGTGCCGTCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCTACATGTCTGCCGGTGCCGT...2713.003120000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCTACATGTCTGCCGGTGCC.....2512.002020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGCCGGTGCCGTCAA1912.002000002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCCGGTGCCGTCAA1812.002000002
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCTACATGTCTGCCGGTGCCGT...2512.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCCGCCAAGACTTTCT......................2011.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACTCCGCCGCCAAGACT..........................2111.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACTCCGCCGCCAAGACTTTCT......................2511.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCTACATGTCTGCCGGTG.......2311.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACATGTCTGCCGGTGCCGTCA.2511.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATGTCTGCCGGTGCCGTCA.2211.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGCCGGTGCCGTCA.1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAACTCCGCCGCCAAGAC...........................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTCCGCCGCCAAGACTTTC.......................2211.001000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCTACATGTCTGCCGGTGCC.....2311.001010000
GAG-----AA-----------ATAAAATGTATTA-CT-------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTGCCGGTGCCGTCA.1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCGCCAAGACTTTCTACAT..................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACTCCGCCGCCAAG.............................1811.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACTCCGCCGCCAAGA............................2011.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAACTCCGCCGCCAAGACT..........................2311.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTCCGCCGCCAAGACTTT........................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCCAAGACTTTCTACATGTCTGCC...........2911.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTCCGCCGCCAAGACT..........................2011.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCGCCGCCAAGACTTTCTACA...................2511.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACTCCGCCGCCAAGA............................1911.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCGCCGCCAAGACTTTCTACATGC................2811.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTCCGCCGCCAAGACTTTCTACA...................2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCATCAACTCCGCCGCCAAGACTTT........................2811.001010000
droBip1
AGA-----G----------CAATAAAATGTATTAACT-------GAC--TT---GTA-----AACACT------TGAATTGGTACATCGG----CAGTAGCAGGGCACG----------------GAAACACAT-------------------GTCGAATA--------------------------------------------TT-----CA--TTTTTT-------------------------------------------------------------------------------TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACT-------A--TTTAATTAGATCATCAACTCGGCCGCCAAGACCTTCTACATGTCGGCTGGTGCCGTCAASizeHit CountTotal NormTotal
No Reads
droKik1
GAG-----TC-GAGAAG-----AG------GAAGAATAAAATGCGAC---T---GTA-----TTAACTTGATCTTGAATTGGTGTATTAG----C------------CA----------------GGCATCGAAAA-----------------ACTGATTGCTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTA----------------------------------------------------------------A------------TCCCCGAT----------------------------------------------------------------------------------------------------------------------------------------------T-----------GTTT-------CCCC--TCAAACTAGATCATCAACTCGGCCGCCAAGACATTCTACATGTCCGCCGGCGCCGTCAASizeHit CountTotal NormTotal
No Reads
droFic1
AAG-----AA-----------GTGGAGTTTAAACAATAAAGTGCGAA--CT---GTA-----TTAAGT------TGAATTGTAGAATTGG----CAGTTAGAGGGAGGA----------------TCA-TA--C-------------------AA----CA--------------------------------------------AATA-------AACATCCCATA-------TACCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT--------------------------------------------------------------------------------------------------------------------AA--T-----------------------------ATAATTTT------------------ATAATCCC--CGATCCTAGATCATCAACTCCGCCGCCAAGACATTTTACATGTCCGCCGGTGCAGTGAASizeHit CountTotal NormTotal
No Reads
droEle1
GAG-------ACGGAAGTAGAGCGGAG-ATAAAAAATAAAGTGCGAC--TT---GTA-----TTAACT------TGGATTGGGGAATCGA----C---TTGAATTAGCA----------------GGAACTAAC-------------------TT--AA----------------------------------------------------------------------------------------------------CAGATCTGTTACTGATTTTAGAAAAAGTCATTATACCTATCATCATGTGGT-----TCC-TATCAATAAGATAAGATCATTTTTATCTTCATAGCAATGACACATTATTTTATAATCCCTGAAATTAGATCATCAATGGATAGGCA--ATTAGATCATTTACCCATCATCATATGTTTCCTATTAACAAGATCATTTA-----------------------------TTT---------AT-----------------------------------AATTTTTATCTTCATAACAATG-AAA--C-----------------------------TTTATTTT------------------ATTATCCC--CGAAATTAGATTATCAACTCGGCAGCCAAGACATTTTACATGTCCGCCGGTGCTGTGAASizeHit CountTotal NormTotal
No Reads
droRho1
GAG-------ACGGAAGTAGAGCAGTGTTTAACCAATAAAGTGCGAC--TT---GTA-----TTAACT------TGAATTGGCGAGATTG----CAGTTAGAGGGAGG-------------------ATTTAAT-------------------AATGACCA--------------------------------------------TTTTTAACTT-TGAACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATCATTTTATTCCTTGTAATACAGTCATGGT-----------------------------TTT---------TC------------------------------------------------------ATG-AAA--T-----------------------------ATTCTTTT------------------ATAATACC--CCGTATTAGATCATTAACTCGGCGGCCAAGACCTTCTATATGTCCGCGGGTGCCGTGAASizeHit CountTotal NormTotal
No Reads
droBia1
GAACGTCGAGACGGAGATGGAGTGGAGTGTAACCAATAAAGTCCGAC--TT---GTA-----TTAGCT------TGAATTGGTGCATTGG----CAGTTTGAGGGAGGA----------------GGCATCCAC-------------------ATTGACCC--------------------------------------------GATTATCCT--TACACT-------------------------------------------------------------------------------TAT----------------------------------------------------------------------------------------------------------------------------C---------CTTATAATCTAG----------ACTTTTCGCAACCATATGCATATGGA------------------------------------------------------------------------------T----------------------------------------------TTTTCATTGTAATACC--CAACCTTAGATTATCAACTCTGCCGCCAAGACCTTCTATATGTCTGCCGGTGCCGTGAASizeHit CountTotal NormTotal
No Reads
droTak1
GAG-------ACGGAAGTGGAGCGGAGTGTAACAAATAAAGTGCGAC--TT---GTA-----TTAACT------TGAATTGGCGAATGAG----CGGTTTCAGGGAGGA----------------GGCATTTGA-------------------ATTAAACA--------------------------------------------GAATCAACAG-AA-----------------------------------------CATA-----------------AAATAGTTATTATACCCATTATCATTGGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------TCCCATCCATAAT-------------------GT--------------------------------GAACAATT-----TTTCATTTAAACT-AAACT-T-------------------------------A---------------TC---TTGTTTTACCATAAACCCTAGATCATCAACTCGGCCGCCAAGACCTTCTACATGTCCGCTGGTGCCGTAAASizeHit CountTotal NormTotal
No Reads
droEug1
GAG-------GTGGAAGTGAAGCTGAGTGTTAAAAATAAAGTGCGAC--TTAAAGTA-----TTAATT------TGATTTGCT-ATTAGA----CAGTTAGTGGGAGCG----------------AGGATTCAC-------------------TTCAAACA--------------------------------------------GGTTCTACA-T------------------------------------------------------------------------------------ACCTTTAAA-----AACTTCAT---------------------------------------------TATTTT----------------------------GGCCTC----------------ATAAATTTTTTAAGTT-------------CCCTATT-----------------------------CCCATAAGTTCATTATTAAACAAAGGGTTCCCTTGATAAACGATAAATATT-----TCCCAAATATAAT-AGAAA-T----------------------------------------------CTCTTATT------GC--AATCTTCAGATCATAAACTCGGCCGCCAAGACCTTTTACATGTCCGCTGGTGCCGTCAASizeHit CountTotal NormTotal
No Reads
dm3
AGA-----A-------------AGGAGTGCATCAAATAAAG---------C---GTA-----TTAACT------TGAATTGGCGAATTTG----CAGTTTGATGGAACA----------------GGCATCCAC-------------------ACTGAGCA--------------------------------------------TTATTTTCA--TTCATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--TCACTTTATTATT------------TCTAAGTCATATTACACATTCATAATAATATGGATT---------GCT------------------------------------------------------AAA-ATA--T-----------------------------ATCCCTTT------------------AAAATTTC--AAATCTTAGATCATCAACTCGGCGGCCAAGACCTTCTACATGTCTGCCGGTGCCGTCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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droSim2
AGA-----A-------------AGGAGTGCATCAAATAAAG---------C---GTA-----TTAACT------TGAATTGGCGAATTTG----CAGTTTGAGGGTGCA----------------GGCATCCAC-------------------ACTAAGCA--------------------------------------------ATATTACATT-TGCATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACACTTTATGATT------------CCTAATACATATTCCACATTCATAATAATATGGAGT---------GCT------------------------------------------------------AAA-ATC--T-----------------------------ATCCCTTT------------------AAAATTCC--AAACCTTAGATCATCAACTCGGCGGCCAAGACCTTCTACATGTCCGCCGGCGCCGTCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACTCGGCGGCCAAGACCTT........................2413.00321000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACATGTCCGCCGGCGC......2013.00302010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACATGTCCGCCGGC........1812.00210100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTCGGCGGCCAAGACCT.........................2011.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACATGTCCGCCGGCGCCGTCAA2611.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAACTCGGCGGCCAA..............................2011.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACTCGGCGGCCAAG.............................1911.00100100000000000000
..............................ATCAAATAAAG---------C---GTA-----TTAACT------T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
........................................................A-----TTAACT------TGAATTGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000010000000
droSec2
TCA-----AGACGGAAC-AGATAGGA-TGCATCAAATAAAG---------C---GTA-----TTAACT------TGAATTGGCGAATTTG----CAGTTTGAGGGTGCA----------------GGCATCCAC-------------------ACTAAGCA--------------------------------------------TTATTACATT-TGCATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACACTTTATGATT------------CCTGATACATATTCGACATTCATAATAAAATGGAGT---------GCT------------------------------------------------------AAA-ATC--T-----------------------------ATCCCTTT------------------AAAATTCC--AAACCTTAGATCATCAACTCGGCGGCCAAGACCTTTTACATGTCCGCCGGCGCCGTCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................ATTGGCGAATTTG----CAGTTTGAGGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCGCCGGCGCCGTC..1911.0010100
......................................................................................TTTG----CAGTTTGAGGGTGCA----------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACCTTTTACATGTCCGCCG..........2311.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTTACATGTCCGCCGGCGCC.....2511.0010010
.....................................................................................ATTTG----CAGTTTGAGGGTGCA----------------GGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGTCCGCCGGCGCCGTC..2011.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACTCGGCGGCCAAGACC..........................2211.0010001
...............AC-AGATAGGA-TGCATCAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
droYak3
GAT-------ATGGAAG-ACACCGGAGTGCATCAAATAAAG---------C---GTA-----TTAACT------TGAATTGGTGAATTTG----CAGTTGAAGGCAGCA------------------------------------------------------------------------------------------------TTATTACATA-TACATCT-----------TAACACTTTCATGATTTACTTTATA----------------------------------------------------------C-TAT---------------------------------------------GTTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--T-----------------------------ATCCGTTT------------------AAAAATCC--AAACCTTAGATAATCAACTCCGCGGCCAAGACCTTCTACATGTCCGCCGGCGCCGTCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATGTCCGCCGGCGCCGTC..2215.00502000030000
...........TGGAAG-ACACCGGAGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCGCGGCCAAGACCTTCT......................2211.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTTCTACATGTCCGCCGGCGC......2511.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTCTACATGTCCGCCG..........1911.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTCCGCGGCCAAGACCTT........................2111.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCGCGGCCAAGACCTTCTACA...................2411.00100001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCGCCGGCGCCGTCA.2011.00100001000000
.........................AGTGCATCAAATAAAG---------C---GTA-----TTAACT------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACATGTCCGCCGGCGCC.....2111.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTCCGCGGCCAAGA............................1811.00110000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTCTACATGTCCGCCGGCGCCGT...2511.00101000000000
droEre2
AT--------ACGGAAG-ACAACGGAGTGCATCAAATAAAG---------C---GTG-----TTAACT------TGAATTGGTGAATTTG----CAGTTAAAGG----A----------------GGCATCCAC-------------------ACTAAGCA--------------------------------------------TTATTACATT-TACATA------------TAACACTT--ATGAT------TATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGT---------GTT------------------------------------------------------A----------------------------------------CTGTTT------------------AAAAATCC--ACACCTTAGATAATCAACTCGGCGGCCAAGACCTTCTACATGTCCGCAGGCGCCGTCAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGGCGGCCAAGACC..........................1811.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTCTACATGTCCGCAGGCGCC.....2511.0011000000
..........................GTGCATCAAATAAAG---------C---GT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCGCAGGCGCCGTCA.2011.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACTCGGCGGCCAAGACCTTCT......................2511.0010000100

Generated: 05/17/2015 at 04:16 AM