ID:

dvi_15912

 Coordinate:

scaffold_13047:7827890-7828040 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.5 -17.1 -17.0

Flybase annnotation

exon [dvir_GLEANR_8566:12]; CDS [Dvir\GJ23210-cds]; intron [Dvir\GJ23210-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTAATGTTTTGATTGTCAGCCAAAATGTTACTGTCTATAGGTTTTTCTGTTTCGTGAAAGGTTTTCTTCTTTATATATATATTTATTTGTAAACTTGTGTTTTGTATTGTATTGTATTTTCATTTTTATTAATTTAAATATATATTTTCTCTCTTATTCCCCTGATTTCGATTTCGCTTATGATTTGGCAACATTGAACAGACGACCTTGTTTTGGAGAAGGAGCGTTACAAGGATATTGGCGACGATCTC
**************************************************.........((.............(((((((((((...(((((...(((....((((......))))...))).))))).....))))))))))).............)).(((..((((((...(((........)))...)))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M061
embryo
 SRR060679
140x9_testes_total
 V047
embryo
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 V116
male body		 M047
female body
 SRR060664
9_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060677
Argx9_ovaries_total
 V053
head
 SRR060663
160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060676
9xArg_ovaries_total
 GSM1528803
follicle cells		 SRR060672
9x160_females_carcasses_total
...........................................................................................................................................................................................................GACCTTGTTTTGGAGAAGGAGC.......................... 22 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTTTTGGAGAAGGAGCGTTACAAG.................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTTTTGGAGAAGGAGCGTTACAAGGAT............... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CTTGTTTTGGAGAAGGAGC.......................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GTTACAAGGATATTGGCGACGATCT. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTGGAGAAGGAGCGTTACAAGGATATT............ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TATGATTTGGCAACATTGAA..................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTTTTGGAGAAGGAGCGTTACA.................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................GCGTTACAAGGATATTGGC......... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CAAGGATATTGGCGACGATCTC 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GACCTTGTTTTGGAGAAGG............................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGGATTGTATTTTCTTTTTTAT.......................................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GTTACAAGGATATTGGCGACGATCTC 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GGGGAAGGAGCGTTACAAGGATATTGG.......... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGGAGCGTTACAAGGATATTGGC......... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GACGACCTTGTTTTGGAGAA............................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GCGTTACAAGGATATTGGCG........ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GACGACCTTGTTTTGGAGAAGGAGC.......................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GAAGGAGCGTTACAAGGATATTGGCG........ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GACCTTGTTTTGGAGAAGGAG........................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CTAAGACGACCTTGTTTTGGAGAAGGAGC.......................... 29 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGGAGAAGGAGCGTTACAAG.................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TACAAGGATATTGGCGAC...... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCCTTGTTTTGGAGAAGGAGC.......................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGTTGTGGAGAAGGAGAGT........................ 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................TCATTTCGATTTCTCTTATG..................................................................... 20 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGAACTGAAGACCTTGGTTT..................................... 20 3 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGGATTGTATTTTCTTTGTTATT......................................................................................................................... 24 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................................CAAGGATATTCTCCACGATC.. 20 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GAAGGACCGTTACGATGAT............... 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................TTCGTGTGAGGTTTTCTGCT..................................................................................................................................................................................... 20 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0
........................................................................................................................................................................................TTGGGAACATTGAGCAGAGG............................................... 20 3 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GGCATATGATTTGGCAAGAT......................................................... 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................CGCCATTGTTTTGAAGAAGG............................. 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

AATTACAAAACTAACAGTCGGTTTTACAATGACAGATATCCAAAAAGACAAAGCACTTTCCAAAAGAAGAAATATATATATAAATAAACATTTGAACACAAAACATAACATAACATAAAAGTAAAAATAATTAAATTTATATATAAAAGAGAGAATAAGGGGACTAAAGCTAAAGCGAATACTAAACCGTTGTAACTTGTCTGCTGGAACAAAACCTCTTCCTCGCAATGTTCCTATAACCGCTGCTAGAG
**************************************************.........((.............(((((((((((...(((((...(((....((((......))))...))).))))).....))))))))))).............)).(((..((((((...(((........)))...)))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060681
Argx9_testes_total
 SRR060689
160x9_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 V047
embryo
 SRR060679
140x9_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR1106728
larvae
 M047
female body
 SRR060687
9_0-2h_embryos_total
 V116
male body
......................................................AGTTTCCACAAGAAGAAAT.................................................................................................................................................................................. 19 2 6 15.33 92 41 17 16 3 5 4 2 0 1 1 1 1 0 0 0 0
.......................................................GTTTCCACAAGAAGAAAT.................................................................................................................................................................................. 18 2 12 1.50 18 10 6 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................GAGTTTCCACAAGAAGAAAT.................................................................................................................................................................................. 20 3 20 0.95 19 5 3 6 0 1 0 0 0 0 1 0 0 0 1 1 1
........................................................TTTCCAAAAGAAGAAATGT................................................................................................................................................................................ 19 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AGCACTTTCAAAAACAAGAA.................................................................................................................................................................................... 20 2 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................TTTCCAAAAGAAGAAATTG................................................................................................................................................................................ 19 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTCCACAAGAAGAAAT.................................................................................................................................................................................. 16 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............AGTCGGTTTTAGAATCATAG........................................................................................................................................................................................................................ 20 3 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................AGAGTTTCCAAAAGAAGAAA................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:7827840-7828090 - dvi_15912 TT----AATGTTTTGATTGTCAGCCAA------------------A------ATGTTACTGT---------CTATAGGTTT------TTCTGT---------TTCG----TGAAAGGTTTTCTTCTTTA---------------TATATATATTTATTTGTAAACTTGTGTTTTGTATTGTATTG---TA---TTTTCA----T-TTTTATTAATTTAAAT------ATATATTTTCTCT-CTTATTCC---CCTGATTTCGATTTCGCTTATGATTTGGCA---------ACATTGAA----CAGACGACCTTGTTTTGGAGAAGGAGCGTTACAAGGATATTGGCGACGATCTC
droMoj3 scaffold_6540:15549139-15549395 - TT----GTTGTCCAGATTGGA----------TTATAATCCATTATAGTGTTAGTTTCAATGTGTCT-CTGTA-AAAGGTTTATTTTTCTATGT---------TTTG----TGAGGGGTT--------TATCAATATTGA-TTT--GTGT--------------ACTTG--------ATTTAATTA---TA---TTTTCA----T-TTTTATTAATTTCAAATTTTCTGTATATTTTCTTT-ACTCTTCTGTG------------TTCGCTTATGATTTGACA-------A--CAATGAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATCGGCGACGATCTC
droGri2 scaffold_14906:896316-896537 + GT---------CCAGGTGA----TTTT------------------AGTGTCAGT-TGAACGTTTCTTGTGTC---------------CTATACATATATATTTTTG----TGCGAGGTT--------TATGTTTACTCA-TTTATGTGA--------------ACTTG--------A--------TTTTA---TTTTTA----TTTTTTATTAATTTCAAT------ATTTGTTCTCTTT-CCTCC--TGTG------------TTCTTATATGATTTGGCA------------TTAAA----CAGACGACCTTGTGTTGGAGAAGGAGCGTTACAAGGATATTGGAGACGATCTC
droWil2 scf2_1100000004943:3672276-3672477 + CA----A-------AATGA-------------------------------------TTTTGT---------CT--AGGTCC------TTGTGTATCTATGTCTTTG----GGAAAGGTCTTGTTATTTATGAGTGTTAA-TTTATGTAT--------------ATTTC--------C---A----TTTGA---TTTTCA----T-TTTTATTAATTTCTA--------------TT---------T--TGTG------------T---TTTATGATTTTCTT-T------TACTTCGAATCTTCAGACGACCTTGTTCTGGAGAAGGAGCGTTACAAGGATATTGGCGACGATCTC
dp5 2:28061179-28061381 + TT----AGT-------CCT--------CCAACCCCCCTCC--------------AACCAGGT---------GT-CA---------------G----------TTTT----TGTTAGGTC------TTT--GTC---CCACTTTGAGTGT--------------AATTG--------G---TA---TTTGT-TTTATATA----T-TTTTATTAACTTGTG--------------TTCTTT-ATTCT--TGCG------------TTCTTTTATGATTTTTCAAT--CA-CTTCGACGAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTC
droPer2 scaffold_6:3387884-3388086 + TT----AGT-------CCT--------CCAACCCCCCTCC--------------AACCAGGT---------GT-CA---------------G----------TTTT----TGTCAGGTC------TTT--GTC---CCACTTTGAGTGT--------------AATTG--------G---TA---TTTGT-TTTATATA----T-TTTTATTAACTTGTG--------------TTCTTT-ATTCT--TGCG------------TTCTTTTATGATTTTTCAAT--CA-CTACGACGAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTC
droAna3 scaffold_13250:121968-122147 - TTTTTTA--------------------------------------T------TTGT-CAGAT---------GT-TA---------------G----------TTTT----TGTCAGGAT----------------------T---GTGT--------------AATTT--------T---AATGTTTTCTGTTTATACA----T--TTTATTAATTTTGG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCTTGAA--CA-CGATGATAAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATCGGAGACGATCTC
droBip1 scf7180000396413:675978-676155 - TT----G--------------------------------------T------GTGAAAAGAT---------GT-TA---------------G----------TTTT----TGTCAGGTT----------------------TT--GTGT--------------AATAT--------T---AATATTTTCTTTTTATAAA------TTTTATTAATTTTGG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCTTGAA--CA-CGATGATGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGATATCGGAGACGATCTC
droKik1 scf7180000302706:495586-495782 + TT----ATTGTTT--------------------------------A------GTGTGAAGGT---------CTTTA---------------G----------TTTGTGTCTGTCAGGAT---------------------TTTCAGTGT--------------AACTT--------A---AGTGATTTGT-TCCAAACC--TAT-TTTTATTAATTTACG--------------TTCCTT-ATTCTTTTGCG------------TTCTCTTATGATTTTACGAA--CATCCACCTTGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGATATCGGAGACGATCTC
droFic1 scf7180000452523:474656-474853 + TT----AATGTCAAGTTTATACGTTTT------------------A------ATGTGAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTT----------------------TTCAGTGT--------------AGTTC--------T---ATTGAGTTCT---TATGCA----T-TTTTATTAATTTCCG--------------TTTCTT-ACTCT--TGCG------------TTCTTTTATGATTTTCCAAA--CA-CCAACTCGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGATATCGGAGACGATCTC
droEle1 scf7180000491278:1736695-1736885 - C-----------GAGTTTTTATGTCTA------------------A------GTGTGAAGGT---------CT-TA---------------G----------TTTG----TGTCAGGTT----------------------TTAATTGT--------------AATTT--------T---AATAATTTTG---TATACA----T-TTTTATTAATTTCTG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTTTCAAA--CA-CTACCTTGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTC
droRho1 scf7180000767960:22115-22309 + GT-------GCATAGGTTATATGTTTA------------------A------GTGTGAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTT----------------------TTAATTGT--------------AATTT--------T---AATGGTTTCT---TATACA----T-TTTTATTAATTTCTG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTTTCACA--CA-CCACCTTGAA----CAGACGACCTGGTGCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTC
droBia1 scf7180000302402:4113380-4113576 + AT----G---TTGAGATTATAAGTTTT---------T------A-A------GTGTGAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTC----------------------TTAA-TGT--------------AATTT--------T---AATGATTTCT---TATGCA----T-TTTTATTAATTTC-G--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCCCACACTCA-CCAACCTGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGACATCGGAGACGATCTC
droTak1 scf7180000415310:804812-805002 - TC----------GAGTTTTTAAGTTTA------------------A------GTGTGTAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTC----------------------TTAAGTGT--------------ACTTT--------T---AATTATTTCT---TATGCA----C-TTTTATTAATTTC-G--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTTCCACA--CA-CCAACTTGAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTC
droEug1 scf7180000409444:96231-96425 - CG----A-------GTGTATAATTTTA------------------A------GTGTGAAGGT---------CT-CA---------------G----------TTTTTG--TGTTAGGTT----------------------TTCAGTGT--------------AATTT--------T---AATAATTTCT---TATACA----TTCTTTATTAATTTATG--------------TTTTTTAACTCT--TGCG------------TTCTTTTATGATTTGTCATA--CA-CCAACTTGAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTC
dm3 chr3R:11133165-11133361 + TT----------TAAGTTATAAGTTTT---------T--------T------GTGTAAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTT----------------------TTAAGTGT--------------AATTT--------T---AATGATTTTC---AATGAATTTAT-TTTTATTAATTTTCG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCCCAAA--CA-ACAACTTGAA----CAGACGACCTCGTCCTGGAGAAGGAGCGCTACAAGGACATCGGAGACGATCTC
droSim2 3r:10095648-10095850 - dsi_14115 TTGGTTATTGTCCAGATTATAAGTTTT------------------T------GTGTGAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTT----------------------TTAAGTGT--------------AATTT--------T---AATGATTTCC---TATGCG----TTTTTTATTAATTTCCG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCCCACA--CA-CCAACTCGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGACATCGGAGACGATCTC
droSec2 scaffold_0:10818558-10818756 - TT----ATTGTCCAGATTATAAGTTTT------------------T------GTGTGAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTT----------------------TTAAATGT--------------AATTT--------T---AATGATTTCC---TATGCG----TTTTTTATTAATTTCCG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCCCACA--CA-CCAACTCGGA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGACATCGGAGACGATCTC
droYak3 3R:15299668-15299869 - TCGGTTATTGTCCAGATTATAAGTTTT------------------C------GTGTGAAGGT---------CC-TA---------------G----------TTTG----TGTCAGGTC----------------------TTAAGTGT--------------AATCC--------T---AATGATTTCT---TATGCG----T-TTTTATTAATTTCCG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCACACA--CA-CCAACTCGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGACATCGGAGACGATCTC
droEre2 scaffold_4770:10656885-10657083 + TT----ATTGTCCAGATTATAAGTTTT------------------C------GTGTGAAGGT---------CT-TA---------------G----------TTTG----TGTGAGGTC----------------------TTAAGTGT--------------AATTC--------T---AATGATTTCT---TATGCG----TTTTTTATTAATTTCTG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTTCCACA--CA-CCAACTCGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGACATTGGAGACGATCTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TT----AATGTTTTGATTGTCAGCCAA------------------A------ATGTTACTGT---------CTATAGGTTT------TTCTGT---------TTCG----TGAAAGGTTTTCTTCTTTA---------------TATATATATTTATTTGTAAACTTGTGTTTTGTATTGTATTG---TA---TTTTCA----T-TTTTATTAATTTAAAT------ATATATTTTCTCT-CTTATTCC---CCTGATTTCGATTTCGCTTATGATTTGGCA---------ACATTGAA----CAGACGACCTTGTTTTGGAGAAGGAGCGTTACAAGGATATTGGCGACGATCTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................GACCTTGTTTTGGAGAAGGAGC..........................2212.002000100000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTTTTGGAGAAGGAGCGTTACAAG..................2411.001000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTTTTGGAGAAGGAGCGTTACAAGGAT...............2711.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CTTGTTTTGGAGAAGGAGC..........................1911.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GTTACAAGGATATTGGCGACGATCT.2511.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TTGGAGAAGGAGCGTTACAAGGATATT............2711.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TATGATTTGGCA---------ACATTGAA----.....................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................GTTTTGGAGAAGGAGCGTTACA....................2211.001000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................GCGTTACAAGGATATTGGC.........1911.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CAAGGATATTGGCGACGATCTC2211.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GACCTTGTTTTGGAGAAGG.............................1911.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GTTACAAGGATATTGGCGACGATCTC2611.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AGGAGCGTTACAAGGATATTGGC.........2311.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GACGACCTTGTTTTGGAGAA...............................2011.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GCGTTACAAGGATATTGGCG........2011.001000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................GACGACCTTGTTTTGGAGAAGGAGC..........................2511.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GAAGGAGCGTTACAAGGATATTGGCG........2611.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................GACCTTGTTTTGGAGAAGGAG...........................2111.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TGGAGAAGGAGCGTTACAAG..................2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TACAAGGATATTGGCGAC......1811.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
TT----GTTGTCCAGATTGGA----------TTATAATCCATTATAGTGTTAGTTTCAATGTGTCT-CTGTA-AAAGGTTTATTTTTCTATGT---------TTTG----TGAGGGGTT--------TATCAATATTGA-TTT--GTGT--------------ACTTG--------ATTTAATTA---TA---TTTTCA----T-TTTTATTAATTTCAAATTTTCTGTATATTTTCTTT-ACTCTTCTGTG------------TTCGCTTATGATTTGACA-------A--CAATGAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATCGGCGACGATCTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................AAGGAGCGCTACAAGGAT...............1812.002200000
.................................................................................................................................................................................................................................................................................................................................AGAAGGAGCGCTACAAGGAT...............2012.002200000
....................................................................................................................................................................................................................................................................................................................GACCTTGTCCTGGAGAAGGAG...........................2111.001100000
................................................................................................................................................................................................................................................................................................................................................AGGATATCGGCGACGATC..1811.001000100
.................................................................................................................................................................................................................................................................................................................................AGAAGGAGCGCTACAAGG.................1811.001100000
....................................................................................................................................................................................................................................................................................................................GACCTTGTCCTGGAGAAGGA............................2011.001100000
..........................................................................................................................................................................................................................................................................................................................................GCTACAAGGATATCGGCGACGATCT.2511.001100000
.........................................................................................................................................................................................................................................................................................................................TGTCCTGGAGAAGGAGCGCT.......................2011.001100000
.........................................................................................................................................................................................................................................................................................................................................CGCTACAAGGATATCGGCGACGATCT.2611.001100000
droGri2
GT---------CCAGGTGA----TTTT------------------AGTGTCAGT-TGAACGTTTCTTGTGTC---------------CTATACATATATATTTTTG----TGCGAGGTT--------TATGTTTACTCA-TTTATGTGA--------------ACTTG--------A--------TTTTA---TTTTTA----TTTTTTATTAATTTCAAT------ATTTGTTCTCTTT-CCTCC--TGTG------------TTCTTATATGATTTGGCA------------TTAAA----CAGACGACCTTGTGTTGGAGAAGGAGCGTTACAAGGATATTGGAGACGATCTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CA----A-------AATGA-------------------------------------TTTTGT---------CT--AGGTCC------TTGTGTATCTATGTCTTTG----GGAAAGGTCTTGTTATTTATGAGTGTTAA-TTTATGTAT--------------ATTTC--------C---A----TTTGA---TTTTCA----T-TTTTATTAATTTCTA--------------TT---------T--TGTG------------T---TTTATGATTTTCTT-T------TACTTCGAATCTTCAGACGACCTTGTTCTGGAGAAGGAGCGTTACAAGGATATTGGCGACGATCTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................AGAAGGAGCGTTACAAGG.................1811.00101000
.............................................................................................................................................................................................................................................................................................................................................ACAAGGATATTGGCGACGATCTC2311.00100010
....................................................................................................................................................................................................................................................................................................................GACCTTGTTCTGGAGAAGGAGCGTT.......................2511.00100100
....................................................................................................................................................................................................................................................................................................................GACCTTGTTCTGGAGAAGGAGC..........................2211.00100010
........................................................................................................................................................................................................................................................................................................................................GCGTTACAAGGATATTGGCGACG.....2311.00100010
...........................................................................................................................................................................................................................................................................................................................TTCTGGAGAAGGAGCGTTACAAGGATA..............2711.00100010
....................................................................................................................................................................................................................................................................................................................GACCTTGTTCTGGAGAAGGAGCGTTA......................2611.00100010
dp5
TT----AGT-------CCT--------CCAACCCCCCTCC--------------AACCAGGT---------GT-CA---------------G----------TTTT----TGTTAGGTC------TTT--GTC---CCACTTTGAGTGT--------------AATTG--------G---TA---TTTGT-TTTATATA----T-TTTTATTAACTTGTG--------------TTCTTT-ATTCT--TGCG------------TTCTTTTATGATTTTTCAAT--CA-CTTCGACGAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................GAGAAGGAGCGCTACAAGG.................1912.0020200000000
........................................................................................................................................................................................................................................................................................................................................GCGCTACAAGGATATTGGA.........1912.0020200000000
.................................................................................................................................................................................................................................................................................................................................AGAAGGAGCGCTACAAGGA................1911.0010100000000
.................................................................................................................................................................................................................................................................................................................GACGACCTTGTCCTGGAGAAGG.............................2211.0010000010000
............................................................................................................................................................................................................................................................................................................................................TACAAGGATATTGGAGAC......1811.0011000000000
..................................................................................................................................................................................................................................................................................................................ACGACCTTGTCCTGGAGAAGGAGCGC........................2611.0010010000000
........................................................................................................................................................................................................................................................................................................................TTGTCCTGGAGAAGGAGC..........................1811.0010100000000
.......................................................................................................................................................................................................................................................................................................................CTTGTCCTGGAGAAGGAGCGCTAC.....................2411.0010001000000
.T----AGT-------CCT--------CCAACCCCCCTC.............................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................GCTACAAGGATATTGGAGA.......1911.0010100000000
droPer2
TT----AGT-------CCT--------CCAACCCCCCTCC--------------AACCAGGT---------GT-CA---------------G----------TTTT----TGTCAGGTC------TTT--GTC---CCACTTTGAGTGT--------------AATTG--------G---TA---TTTGT-TTTATATA----T-TTTTATTAACTTGTG--------------TTCTTT-ATTCT--TGCG------------TTCTTTTATGATTTTTCAAT--CA-CTACGACGAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................GAAGGAGCGCTACAAGGATATTG...........2313.003300000
................................................................................................................................................................................................................................................................................................................AGACGACCTTGTCCTGGAGAAGGAGC..........................2611.001100000
..........................................................................................................................................................................................................................................................................................................................................GCTACAAGGATATTGGAGACGATCT.2511.001100000
..................................................................................................................................................................................................................................................................................................................................................GATATTGGAGACGATCTC1811.001100000
......................................................................................................................................................................................................................................................................................................................CCTTGTCCTGGAGAAGGAGC..........................2011.001001000
.................................................................................................................................................................................................................................................................................................................GACGACCTTGTCCTGGAGAAGGA............................2311.001001000
....................................................................................................................................................................................................................................................................................................................GACCTTGTCCTGGAGAAGGAGC..........................2211.001000001
...................................................................................................................................................................................................................................................................................................................CGACCTTGTCCTGGAGAAGG.............................2011.001001000
....................................................................................................................................................................................................................................................................................................................GACCTTGTCCTGGAGAAGGAGCG.........................2311.001010000
....................................................................................................................................................................................................................................................................................................................GACCTTGTCCTGGAGAAGGAG...........................2111.001000001
...................................................................................................................................................................................................................................................................................................................CGACCTTGTCCTGGAGAAG..............................1911.001010000
droAna3
TTTTTTA--------------------------------------T------TTGT-CAGAT---------GT-TA---------------G----------TTTT----TGTCAGGAT----------------------T---GTGT--------------AATTT--------T---AATGTTTTCTGTTTATACA----T--TTTATTAATTTTGG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCTTGAA--CA-CGATGATAAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATCGGAGACGATCTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................GGATATCGGAGACGATCTC1911.001010000
.....................................................................................................................................................................................................................................................................................................................................GGAGCGCTACAAGGATATCGGAGACG.....2611.001010000
..........................................................................................................................................................................................................................................................................................................................................GCTACAAGGATATCGGAGAC......2011.001010000
..................................................................................................................................................................................................................................................................................................................................GAAGGAGCGCTACAAGGATATC............2211.001001000
..........................................................................................................................................................................................................................................................................................................................GTCCTGGAGAAGGAGCGCTACAAGG.................2511.001010000
....................................................................................................................................................................................................................................................................................................................................AGGAGCGCTACAAGGATATC............2011.001010000
.............................................................................................................................................................................................................................................................................................................................CTGGAGAAGGAGCGCTAC.....................1811.001010000
........................................................................................................................................................................................................................................................................................................................................GCGCTACAAGGATATCGGAGACGATCTC2811.001010000
................................................................................................................................................................................................................................................................................................................AGACGACCTTGTCCTGGAGAAGGA............................2411.001010000
.........................................................................................................................................................................................................................................................................................................................TGTCCTGGAGAAGGAGCGCTAC.....................2211.001010000
..................................................................................................................................................................................................................................................................................................................................GAAGGAGCGCTACAAGGA................1811.001010000
....................................................................................................................................................................................................................................................................................................................GACCTTGTCCTGGAGAAGGA............................2011.001001000
....................................................................................................................................................................................................................................................................................................................GACCTTGTCCTGGAGAAGGAGCGCTAC.....................2711.001010000
.............................................................................................................................................................................................................................................................................................................................CTGGAGAAGGAGCGCTACAAGGATATC............2711.001010000
droBip1
TT----G--------------------------------------T------GTGAAAAGAT---------GT-TA---------------G----------TTTT----TGTCAGGTT----------------------TT--GTGT--------------AATAT--------T---AATATTTTCTTTTTATAAA------TTTTATTAATTTTGG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCTTGAA--CA-CGATGATGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGATATCGGAGACGATCTCSizeHit CountTotal NormTotal
No Reads
droKik1
TT----ATTGTTT--------------------------------A------GTGTGAAGGT---------CTTTA---------------G----------TTTGTGTCTGTCAGGAT---------------------TTTCAGTGT--------------AACTT--------A---AGTGATTTGT-TCCAAACC--TAT-TTTTATTAATTTACG--------------TTCCTT-ATTCTTTTGCG------------TTCTCTTATGATTTTACGAA--CATCCACCTTGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGATATCGGAGACGATCTCSizeHit CountTotal NormTotal
No Reads
droFic1
TT----AATGTCAAGTTTATACGTTTT------------------A------ATGTGAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTT----------------------TTCAGTGT--------------AGTTC--------T---ATTGAGTTCT---TATGCA----T-TTTTATTAATTTCCG--------------TTTCTT-ACTCT--TGCG------------TTCTTTTATGATTTTCCAAA--CA-CCAACTCGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGATATCGGAGACGATCTCSizeHit CountTotal NormTotal
No Reads
droEle1
C-----------GAGTTTTTATGTCTA------------------A------GTGTGAAGGT---------CT-TA---------------G----------TTTG----TGTCAGGTT----------------------TTAATTGT--------------AATTT--------T---AATAATTTTG---TATACA----T-TTTTATTAATTTCTG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTTTCAAA--CA-CTACCTTGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTCSizeHit CountTotal NormTotal
No Reads
droRho1
GT-------GCATAGGTTATATGTTTA------------------A------GTGTGAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTT----------------------TTAATTGT--------------AATTT--------T---AATGGTTTCT---TATACA----T-TTTTATTAATTTCTG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTTTCACA--CA-CCACCTTGAA----CAGACGACCTGGTGCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTCSizeHit CountTotal NormTotal
No Reads
droBia1
AT----G---TTGAGATTATAAGTTTT---------T------A-A------GTGTGAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTC----------------------TTAA-TGT--------------AATTT--------T---AATGATTTCT---TATGCA----T-TTTTATTAATTTC-G--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCCCACACTCA-CCAACCTGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGACATCGGAGACGATCTCSizeHit CountTotal NormTotal
No Reads
droTak1
TC----------GAGTTTTTAAGTTTA------------------A------GTGTGTAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTC----------------------TTAAGTGT--------------ACTTT--------T---AATTATTTCT---TATGCA----C-TTTTATTAATTTC-G--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTTCCACA--CA-CCAACTTGAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTCSizeHit CountTotal NormTotal
No Reads
droEug1
CG----A-------GTGTATAATTTTA------------------A------GTGTGAAGGT---------CT-CA---------------G----------TTTTTG--TGTTAGGTT----------------------TTCAGTGT--------------AATTT--------T---AATAATTTCT---TATACA----TTCTTTATTAATTTATG--------------TTTTTTAACTCT--TGCG------------TTCTTTTATGATTTGTCATA--CA-CCAACTTGAA----CAGACGACCTTGTCCTGGAGAAGGAGCGCTACAAGGATATTGGAGACGATCTCSizeHit CountTotal NormTotal
No Reads
dm3
TT----------TAAGTTATAAGTTTT---------T--------T------GTGTAAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTT----------------------TTAAGTGT--------------AATTT--------T---AATGATTTTC---AATGAATTTAT-TTTTATTAATTTTCG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCCCAAA--CA-ACAACTTGAA----CAGACGACCTCGTCCTGGAGAAGGAGCGCTACAAGGACATCGGAGACGATCTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................GTCCTGGAGAAGGAGCGC........................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................CCTCGTCCTGGAGAAGGAGCGC........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AGGACATCGGAGACGATCT.1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TCCTGGAGAAGGAGCGCTACAAG..................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GACCTCGTCCTGGAGAAG..............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GAAGGAGCGCTACAAGGACAT.............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GGAGAAGGAGCGCTACAAGGA................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAGGACATCGGAGACGATCTC2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000
..................................................................................................................................................................................................................................................................................................................ACGACCTCGTCCTGGAGA................................1821.5030000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTCCTGGAGAAGGAGCGCTACAAGG.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GAAGGAGCGCTACAAGGACA..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAGAAGGAGCGCTACAAGGGG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AGGACATCGGAGACGATC..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTTG----TGTCAGGTT----------------------TTAAG..................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GGAGCGCTACAAGGACATCGGAGACGA....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................GAGCGCTACAAGGACATCGGAGAC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GAGCGCTACAAGGACATCGGAGA.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GACGACCTCGTCCTGGAGAAG..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ACCTCGTCCTGGAGAAGGAGCGC........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TACAAGGACATCGGAGACGATCT.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................................................................................................................................................................................GACGACCTCGTCCTGGAGAAGGAGC..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ACAAGGACATCGGAGACGATCT.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAGGACATCGGAGACGATC..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GGACATCGGAGACGATCT.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CGCTACAAGGACATCGGAGACGATCT.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAGGACATCGGAGACGATCT.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AGAAGGAGCGCTACAAGGACA..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CGCTACAAGGACATCGGAGA.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GAAGGAGCGCTACAAGGA................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TG----TGTCAGGTT----------------------TTAAGTGT--------------AATTT--------T---AA..............................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................GGAGAAGGAGCGCTACAAGGACATC............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AGCGCTACAAGGACATCGGAGACATC...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ACGACCTCGTCCTGGAGAAGGA............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CGACCTCGTCCTGGAGAAG..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................TGTAAAGGT---------CT-CA---------------G----------TTTG----TGTCAGG...............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................GAGAAGGAGCGCTACAAGGA................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TAAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTT----------------------T......................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................TCCTGGAGAAGGAGCGCTAC.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTCCTGGAGAAGGAGCGCTACA....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCTACAAGGACATCGGAGACGATCT.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................T--------T------GTGTAAAGGT---------CT-CA---------------G----------TTTG----TGTCAG................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ACAAGGACATCGGAGACGATC..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................CGACCTCGTCCTGGAGAAGGA............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TCCTGGAGAAGGAGCGCTACAAGGACA..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GAAGGAGCGCTACAAGGAC...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ACAAGGACATCGGAGACGATCTC2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AA--CA-ACAACTTGAA----CAGACGA..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AGGAGCGCTACAAGGACATCGGAG........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CAAGGACATCGGAGACGATCT.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TCCCAAA--CA-ACAACTTGAA----CAGACGAC.............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................CCTCGTCCTGGAGAAGG.............................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GGAGAAGGAGCGCTACAAGGACATCGGA.........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TACAAGGACATCGGAGACGATCTC2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................AGGACATCGGAGACGATCTC2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CTCGTCCTGGAGAAGGAGC..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................CGACCTCGTCCTGGAGAAGG.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTCCTGGAGAAGGAGCGCTACAAG..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TTGAA----CAGACGACCTCGTCCTGGAGAA...............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTGGTTATTGTCCAGATTATAAGTTTT------------------T------GTGTGAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTT----------------------TTAAGTGT--------------AATTT--------T---AATGATTTCC---TATGCG----TTTTTTATTAATTTCCG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCCCACA--CA-CCAACTCGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGACATCGGAGACGATCTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................GGACATCGGAGACGATCTC1913.00300300000000000000
..............................................................................................................................................................................................................................................................................................................................................CAAGGACATCGGAGACGATCT.2112.00200200000000000000
................................................................................................................................................................................................................................................................................................................................................AGGACATCGGAGACGATCT.1912.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................GCTACAAGGACATCGGAGACGATCT.2512.00200100000000100000
...........................................................................................................................................................................................................................................................................................................................TCCTGGAGAAGGAGCGCTACAAGGACA..............2711.00100000000000010000
................................................................................................................................................................................................................................................................................................................AGACGACCTGGTCCTGGAGAAG..............................2211.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................CGCTACAAGGACATCGGAG........1911.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................AAGGACATCGGAGACGATCTC2111.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................AGGACATCGGAGACGATCTC2011.00100100000000000000
....................................................................................................................................................................................................................................................................................................................GACCTGGTCCTGGAGAAGG.............................1911.00100000000000100000
..........................................................................................................................................................................................................................................................................................................................................GCTACAAGGACATCGGAGAC......2011.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................GCGCTACAAGGACATCGGAGACGATCTC2811.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................ACAAGGACATCGGAGACGATCT.2211.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................GCTACAAGGACATCGGAG........1811.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................GCTACAAGGACATCGGAGACG.....2111.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................TACAAGGACATCGGAGACGATCTC2411.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................GTCCTGGAGAAGGAGCGCTACAAG..................2411.00100000000000100000
...........................................................................................................................................................................................................................................................................................................................................CTACAAGGACATCGGAGAC......1911.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................CGCTACAAGGACATCGGAGAC......2111.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................CGCTACAAGGACATCGGAGACGATCT.2611.00100000001000000000
...................................................................................................................................................................................................................................................................................................................CGACCTGGTCCTGGAGAAGG.............................2011.00100000000000100000
........................................................................................................................................................................................................................................................................................................................................GCGCTACAAGGACATCGG..........1811.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................AAGGACATCGGAGACGAT...1811.00100000000000100000
...............................................................................................................................................................................................................................................................................................................................................AAGGACATCGGAGACGATCT.2011.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................GCGCTACAAGGACATCGGAGAC......2211.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................TACAAGGACATCGGAGACG.....1911.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................GAAGGAGCGCTACAAGGACATCGGAGAC......2811.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................GGTCCTGGAGAAGGAA...........................1670.29200000000020000000
droSec2
TT----ATTGTCCAGATTATAAGTTTT------------------T------GTGTGAAGGT---------CT-CA---------------G----------TTTG----TGTCAGGTT----------------------TTAAATGT--------------AATTT--------T---AATGATTTCC---TATGCG----TTTTTTATTAATTTCCG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCCCACA--CA-CCAACTCGGA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGACATCGGAGACGATCTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................AAGGACATCGGAGACGATCTC2111.0010010
...................................................................................................................................................................................................................................................................................................................CGACCTGGTCCTGGAGAAGGAG...........................2211.0010001
..................................................................................................................................................................................................................................................................................................................................GAAGGAGCGCTACAAGGAC...............1911.0010100
.................................................................................................................................................................................................................................................................................................................GACGACCTGGTCCTGGAGAA...............................2011.0010100
...........................................................................................................................................................................................................................................................................................................................................CTACAAGGACATCGGAGACGATCT.2411.0010010
................................................................................................................................................................................................................................................................................................................................................AGGACATCGGAGACGATCTC2011.0010100
..........................................................................................................................................................................................................................................................................................................................GTCCTGGAGAAGGAGCGCTAC.....................2111.0010001
droYak3
TCGGTTATTGTCCAGATTATAAGTTTT------------------C------GTGTGAAGGT---------CC-TA---------------G----------TTTG----TGTCAGGTC----------------------TTAAGTGT--------------AATCC--------T---AATGATTTCT---TATGCG----T-TTTTATTAATTTCCG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTCACACA--CA-CCAACTCGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGACATCGGAGACGATCTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................CGCTACAAGGACATCGGAGACGATCT.2611.00101000000000
..........................................................................................................................................................................................................................................................................................................................GTCCTGGAGAAGGAGCGCTACAAGGA................2611.00100000010000
..........................................................................................................................................................................................................................................................................................................................................GCTACAAGGACATCGGAGACG.....2111.00100000010000
............................................................................................................................................................................................................................................................................................................................................TACAAGGACATCGGAGACGATCTC2411.00100100000000
droEre2
TT----ATTGTCCAGATTATAAGTTTT------------------C------GTGTGAAGGT---------CT-TA---------------G----------TTTG----TGTGAGGTC----------------------TTAAGTGT--------------AATTC--------T---AATGATTTCT---TATGCG----TTTTTTATTAATTTCTG--------------TTCCTT-ACTCT--TGCG------------TTCTTTTATGATTTTCCACA--CA-CCAACTCGAA----CAGACGACCTGGTCCTGGAGAAGGAGCGCTACAAGGACATTGGAGACGATCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................GAGCGCTACAAGGACATTGG..........2011.0011000000
...................................................................................................................................................................................................................................................................................................................CGACCTGGTCCTGGAGAAG..............................1911.0010000010
..................................................................................................................................................................................................................................................................................................................................GAAGGAGCGCTACAAGGA................1811.0010010000
..........................................................................................................................................................................................................................................................................................................................................GCTACAAGGACATTGGAGACGATCTC2611.0010000010
...............................................................................................................................................................................................................................................................................................................................................AAGGACATTGGAGACGATCTC2111.0010100000
.........................................................................................................................................................................................................................................................................................................................................CGCTACAAGGACATTGGAGAC......2111.0011000000
.......................................................................................................................................................................................................................................................................................................................CTGGTCCTGGAGAAGGAGC..........................1911.0010000010
......................................................................................................................................................................................................................................................................................................................CCTGGTCCTGGAGAAGGAGCGC........................2211.0010001000
..........................................................................................................................................................................................................................................................................................................................GTCCTGGAGAAGGAGCGCTACAAGG.................2511.0010010000
.................................................................................................................................................................................................................................................................................................................................AGAAGGAGCGCTACAAGG.................1811.0010010000
....................................................................................................................................................................................................................................................................................................................GACCTGGTCCTGGAGAAGGAGC..........................2211.0010000010
....................................................................................................................................................................................................................................................................................................................GACCTGGTCCTGGAGAAG..............................1811.0010000010
..................................................................................................................................................................................................................................................................................ATTTTCCACA--CA-CCAACTCGAA----CAG..................................................2511.0010000010
.....................................................................................................................................................................................................................................................................................................................ACCTGGTCCTGGAGAAGGAGC..........................2111.0010000010

Generated: 05/16/2015 at 11:37 PM