ID:

dvi_15885

 Coordinate:

scaffold_13047:7720053-7720203 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.8 -13.7 -13.4 -13.3

Flybase annnotation

exon [dvir_GLEANR_8579:2]; CDS [Dvir\GJ23223-cds]; intron [Dvir\GJ23223-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAAATGTGGCTGCTGCGCCAAGGCAAAATAACTAGGCGCTCATATAGAAAATACAAAATTCAAAATACGAAACACAAAAATGAAATCAATTTTTTGGCAATGAGCCAAATATCTGAAATAGCACAAAACCTTATGAAGTAAAGCAATCCTAGTGTACATCAATTAGTTATAATATTGTTAATTCGCTTGCCACTCCACAGGTTCGGAGGATATTCGCGCCCATGAGACGCCAAGAGTCTCTCGCCCATAC
**************************************************........................................((...((((...((((.........(((.(((((...(((....(((.(((..((.......)).))).)))....))).......))))).)))))))))))......))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060665
9_females_carcasses_total
 V047
embryo
 SRR060687
9_0-2h_embryos_total
 M028
head
 M061
embryo
 SRR060655
9x160_testes_total
 SRR060664
9_males_carcasses_total
 V053
head
 V116
male body		 SRR060659
Argentina_testes_total
 SRR060679
140x9_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060681
Argx9_testes_total
....................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCC................... 20 0 1 9.00 9 3 5 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GCCCATGAGACGCCAAGAGT............. 20 0 1 5.00 5 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................GAAGGGTTCGGAGGATATTCGC................................. 22 3 1 5.00 5 0 3 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGCCCATGAGACGCCAAGA............... 19 0 1 5.00 5 0 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................TTCGCGCCCATGAGACGCCA.................. 20 0 1 3.00 3 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TATTCGCGCCCATGAGACGCC................... 21 0 1 3.00 3 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TATTCGCGCCCATGAGACGCCAAGAGT............. 27 0 1 3.00 3 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGGTTCGGAGGATATTCGCGC............................... 21 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAA................. 22 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGCCCATGAGACGCCAAGAGTCTCTCCCC..... 29 1 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................GCCCATGAGACGCCAAGAGTCTCTC........ 25 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CATGAGACGCCAAGAGTCTCT......... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GCCCATGAGACGCCAAGAGTCTCTCGC...... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CGCCAAGAGTCTCTCGCCC.... 19 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ATATTCGCGCCCATGAGAC...................... 19 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGGTTCGGAGGATATTCG.................................. 18 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGCCCATGAGACGCCAAGAGTCTCTCGCC..... 29 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCA.................. 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GATATTCGCGCCCATGAGACGCC................... 23 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAAGAGT............. 26 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................GGGTTCGGAGGATATTCGCGCC.............................. 22 1 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................CGCCAAGAGTCTCTCGCC..... 18 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGCCCATGAGACGCCAAGAGTCTCTCGC...... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AGACGCCAAGAGTCTCTCGCCCA... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ATATTCGCGCCCATGAGACGCCAAGAGT............. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AAGGGTTCGGAGGATATTCGCGCCCCT........................... 27 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AGACGCCAAGAGTCTCTCGCCC.... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GCCCATGAGACGCCAAGAG.............. 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGCCATGAGACGCCAAGAGT............. 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CAAGAGTCTCTCGCCCATA. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................CCATGAGACGCCAAGAGTCTCT......... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AAGGGTTCGGAGGATATTCGCGCCC............................. 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGGGTTCGGAGGATATTCGCGCCCATG.......................... 27 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GATATTCGCGCCCATGAGACG..................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TATTCGCGCCCATGAGAC...................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GGATATTCGCGCCCATGAGA....................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CGGAGGATATTCGCGCCCATGAGAC...................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TCGCGCCCATGAGACGCCAAGAGT............. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GGAGGATATTCGCGCCCATGAGACGCCA.................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GCCCATGAGACGCCAAGAGTCT........... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CCATGAGACGCCAAGAGTCTCTCGCC..... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGAGACGCCAAGAGTCTCTCGCCC.... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TAATTCGCTTGCCACTCCACAG.................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCATCC............... 24 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................GGAGGATATTCGCGCCCATGAGACGCC................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AAGGGTTCGGAGGATATTCGCGCC.............................. 24 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GAAGGGTTCGGAGGATATTCGCGCC.............................. 25 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGCCCATGAGACGCCAAGAGTCTCTCTC...... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CGCGCCCATGAGACGCCAAGAGTCTCT......... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAAGAGTCT........... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAAGAGTC............ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTCGCGCCCATGAGACGCCAA................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTCGCGCCCATGAGACGCC................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAAGAG.............. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................AAGAGTCTCTCGCCCATA. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTCGCGCCCATGAGACGCCAAGAGTCT........... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTATTCGCGCCCATGAGACGCGAAGA............... 26 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................AAGAGTCTCTCGCCCATAC 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAAG................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GATATTCGTGCCCATGAGACGCCA.................. 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................................................GACGCCAAGAGTCTCTCGCCC.... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CCATGAGACCCCAAGAATCT........... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CATGAGACGCCAAGAGTCT........... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GAGACGCCAAGAGTCTCTCGCCCA... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGAGACGCCAAGAGTCTCTCGC...... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TCGCGCCCATGAGACGCCAAG................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CATGAGACGCCAAGAGTCTCTCGC...... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CGCCAAGAGTCTCTCGCCCA... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GAGGATATTCGCGCCCATGAGA....................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGGGTTCGGAGGATATTCGCGCC.............................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ATATTCGCGCCCATGAGACGCCAAGAG.............. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TCGCGCCCATGAGACGCCAAGAG.............. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGCCCATGAGACGCCAAGAGTCTCTC........ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GCCCATGAGACGCCAAGAGTCTC.......... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGGGTTCGGAGGATATTCGCGCCC............................. 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGGGTTCGGAGGATATTCGCG................................ 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGGGTTCGGAGGATATTCG.................................. 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GGTTCGGAGGATATTCGCGCCCATGAGAC...................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GAGACGCCAAGAGTCTCTCGCCCAT.. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTTCGGAGGATATTCGCGCCC............................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGCCCATGAGACGCCAAGAGT............. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTCGCGCCCATGAGACGCCAAGAGT............. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CAAGAGTCTCTCGCCCCTAC 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AGGATATTCGCGCCCATGAGA....................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AAGGGTTCGGAGGATATTC................................... 19 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AGTAAAGCCTCCCTAGTGT............................................................................................... 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................GCTCATATAGGGATTACAAAA................................................................................................................................................................................................ 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................GAAGGGTTCGGAGGATATT.................................... 19 3 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............GCTGCGCCAACTCAAAAAAA........................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TTTTTACACCGACGACGCGGTTCCGTTTTATTGATCCGCGAGTATATCTTTTATGTTTTAAGTTTTATGCTTTGTGTTTTTACTTTAGTTAAAAAACCGTTACTCGGTTTATAGACTTTATCGTGTTTTGGAATACTTCATTTCGTTAGGATCACATGTAGTTAATCAATATTATAACAATTAAGCGAACGGTGAGGTGTCCAAGCCTCCTATAAGCGCGGGTACTCTGCGGTTCTCAGAGAGCGGGTATG
**************************************************........................................((...((((...((((.........(((.(((((...(((....(((.(((..((.......)).))).)))....))).......))))).)))))))))))......))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 M028
head
 SRR060660
Argentina_ovaries_total
 M027
male body		 SRR060663
160_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 M061
embryo
............................................................................................................................................................................................ACGGTGCGGTCTCCAGGCCT........................................... 20 3 2 0.50 1 0 1 0 0 0 0 0
.........TGACGACACGGTTCCGTTTTA............................................................................................................................................................................................................................. 21 2 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................................................................................................GCGAACCGTGAGTTGTCCA................................................ 19 2 6 0.17 1 0 0 1 0 0 0 0
.........................................................................................................................................TTATTTCGCTAGAATCACAT.............................................................................................. 20 3 14 0.14 2 0 0 0 2 0 0 0
.................................................................................................................................................................................TAATTGAGAGAACGGTGAGG...................................................... 20 3 12 0.08 1 0 0 0 0 1 0 0
........................................................................................................................................................AAAATGTAGTTAATCAATA................................................................................ 19 2 17 0.06 1 0 0 0 0 0 1 0
.........................................................................................................GGGTTATAGACGTGATCGT............................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................CGAACGGGAAGGTGTCCAG............................................... 19 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:7720003-7720253 - dvi_15885 AAA-------AATGTGGCTGCTGCGCCAAGGCAAAATAACTAGGCGCTCA------------TATAGAAAATACAAAA------------------------------------------------------TTCA----AAATA----------------------CGAAACA-CAA--AAA-TGAAATCA-AT-------TT----------------------------------------TTTGGCAATGAGCCAAATATCTGA-----AATAGCACAAAACCT-------------TAT----------------------GA------AG-TAAAGCAAT--CCT---------------------------------AGT--GTACAT--CA-----------ATTAGTTATAATAT--TGTTAATTCGCTTG---CCAC-----------TCCACAGGTTCGGAGGATATTCGCGCCCATGAGACGCCAAGAGTCTCTCGCCCATAC
droMoj3 scaffold_6540:3661638-3661919 - AAA-------AATGCGGCTGTTGCGCCAAGGCAAAATAACTAGGCGCTCATATTG----------GGAATACAAAAGAA-----------------------------T--------------------GA---AA----TG---AAAAACGAAAA--------------GAAA-AAA--AAT-A-AAATGA-AATCAAT--TT----------------------------------------TTTGGCAATGAGCCAAATGGCTGA-----AATAGCGCAAAAATTC------------AGAAAAGCCTTATGAAGTAAGGCGAA--------------T-AAT--AGT---------------------------------AGT--GTATATAGAAA-TGTGCA----------TTAATAT----TTGATTCGTTTCCAAACAC-----------TCCATAGGCTCCGAGGATATTCGTGCCCATGAAGCGCCAAGAGCATCTCGCCCATAC
droGri2 scaffold_14830:3540570-3540816 - AAA-------AATGTGGCTGCTGCGCCAAGGCAAA---------------------------------------ATAGC--TA-----------------------GGC--------------------GCTCATA----TAAAA----C-TACAAAATTCAAAATAC--------GA--AAA-TGAAATCA-AT-------TT----------------------------------------TTTGGCAATGAGCCAAATAGCTGA-----AATAGCGCAAA-------------------------------------------A------CC-TAATGAAGTAAGACAA-TCCCC-----------------------ATAGTAAGTCCGT--CA-----------ATTTGATACAATATGTTGT---TTGTATTG---TCAC-----------TCCACAGGTTCCGAAGATATTCGCGCCCATGAGACCCCAAGAGCCTCTCGCCCATAC
droWil2 scf2_1100000004943:7260917-7261150 + AAATT-------------------------------------------------GAAA-AAATATTG-----------------------------------------T--------------------GTATATA----------------------------------------------------------C----T--TTT-----A------------------------TTTTGT--ATTTGGCATTGAGCCAAATAGTA-A-----AATAGCCCACATAAC--------------------------------------------------TATGAGCAAAATTGGAGGAATTTACCATATAAATAACTATGCAAGCCCAAA---T------A-TATATATATATACGATATACTAAATTGA---T---TTTG---TCAATTATAATTTAAACAACAGGTTCCGAGGATATTCGCGCCCATGAGGCACCAAAAGCCAGCCGCCCATAC
dp5 2:20987618-20987883 - AAAACTCACA------------------------------------------CCC--------AAAAAATATACATAGA--TGTATTCCTATGTCGTTCATGTATCCGTGTATCCGAGTATCCGTGTCCGAGTATA----TGATAGAAAC--------------------------AA--AAT-AGAAATCA-ACTTTAT--TT------TGTGCTT-------------------------TGGCTGGCATTGAGCCAAATAGTGGA-----AATAGCTGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACACACAGGGGT-----------------------ATGGTATCTGC------G-------------------------------------------TGTA-----------TTTATAGGCTCTGAGGATATCCGTGCCCACGAGACGCCACGGGCATCCCGTCCCTAC
droPer2 scaffold_3:3738227-3738492 - AAAACTCACA------------------------------------------CCC--------AAAAAATATACATAGA--TGTATTCCTATGTCGTTCATGTATCCGTGTATCCGAGTATCCGTGTCCGAGTATA----TGATAGAAAC--------------------------AA--AAT-AGAAATCA-ACTTTAT--TT------TGTGCTT-------------------------TGGCTGGCATTGAGCCAAATAGTGGA-----AATAGCTGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACACACAGGGGT-----------------------ATGGTATCTGC------G-------------------------------------------TGTA-----------TTTATAGGCTCTGAGGATATCCGTGCCCACGAGACGCCACGGGCATCCCGTCCCTAC
droAna3 scaffold_13340:6087749-6087999 - AAATCTC--A------------------------------------------TCGAAA-AAATAT-----------------C-----------------------TGT--------------------GTATCTA----TGATAGACAC----AG--------------CACACCAA--AAA-AGAAATCA-ACTTAAA--TTT-T----TTTCT----TCTTAATTTTGTTGTTCTCGCCTCGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATTTTGAATGTATATTTGA----------------------AA------AG-CAATGAACTAACGCT--GGGTT-----------------------ATCCAAA---C------C-------------------------------------------TCTA-----------TTTATAGGCTCTGAGGATATCCGCGCCCACGAGGCGCCAAGGGCTTCTCGTCCCTAC
droBip1 scf7180000396708:2745518-2745774 + AAATCTC--A------------------------------------------TCGAAAGAAATAT-----------------C-----------------------TGT--------------------GTATCTA----TGATAGACAC-TACAC--------------CACA-CAA--AAT-AGAAATCA-ACTTAAT--TTT-T----TTTCTTGATTCTTAATTTTGTTGTTCTCGCCTGGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCCAAATATTT-GAATGTATATTTGA----------------------AA------AG-CAATGAACTAACGCT--GGGTT-----------------------ATCCAAA---C------C-------------------------------------------TCTA-----------TTTATAGGCTCTGAGGATATCCGCGCCCACGAGGCGCCAAGGGCCTCTCGTCCCTAC
droKik1 scf7180000301612:14398-14534 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TCT----------------------AG------CGCCAATGGACTAACGTT--CGGTT-----------------------ATCCAAA---T------A-------------------------------------------CTTA-----------TTTATAGGCTCCGAGGATATCCGCGCCCACGAGGCGCCCAGGGCCTCTCGCCCCTAC
droFic1 scf7180000454104:358192-358411 + GAA-------AA--------------------------------------------------TATAGGATACACATATA--GA-----------------------GGC--------------------GCATCTA----TGATAGACAC--------------------------CG--AAT-AGAAATCA-ACATGAT--TT------TGTGTTTTT----------------TTTTGGTCCGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACGCT--GGGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTTATAGGCTCCGAGGATATCCGCGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTAC
droEle1 scf7180000486474:975870-976097 + AAA-------AA--------------------------------------------------TATAGGATACACATGGG--GC-----------------------GGC--------------------GCATCTATGTATGATAGACAT--------------------------CG--AAT-AGAAATCA-ACTTAAT--TT------T--------------------------TTGCCCCGTTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAAAGCGCTGGGTT-----------------------ATCCAAA---C------A-TCTACC----------TCTAT-----------------C---TCTA-----------TTTATAGGCTCCGAGGACATCCGTGCCCACGAGGCGCCGCGTGCATCTCGTCCCTAC
droRho1 scf7180000766350:23985-24195 - AAA-------AA---------------------------------------------------ATAGGATACACATGCG--GC-----------------------GGG--------------------GCATCTA----TGATACACAT--------------------------CG--AAT-AGAAATCA-ACTTAAT--TT------T--------------------------TTGCCCCGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACGCGCTGGGTT-----------------------ATCCAAA---C------A-------------------------------------------TCTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCGCGTGCCTCTCGTCCCTAC
droBia1 scf7180000302402:3980738-3980950 - AAG-------AA--------------------------------------------------TATGGGATACACATACAGAGG-----------------------GGC--------------------GCATCTA----TGATAGACAC--------------------------AG--AAT-AGAGATCA-ACTCGGC--TTTT----T--------------------------TTGCCCCGCTGGCATTGAGCCAAATAGTTAA-----AATAGCCGAAATATT-------------TGA----------------------A-------AG-CAATGAACTAACGCG--GCGTT-----------------------ATCCAAA---C------A-------------------------------------------CCTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTAC
droTak1 scf7180000415310:942994-943208 + AAA-------AA--------------------------------------------------TATAGGATACACATAGA--GG-----------------------GGC--------------------GCATCTA----TGATAGACAC--------------------------CGAAAAA-AGAAATCA-ACTTAAT--TTT-T----------------------------TTTTGCACCGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACGCC--GCGTT-----------------------ATCCAAA---C------A-------------------------------------------TCTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTAC
droEug1 scf7180000409100:64948-65190 + AAA--------A--------------------------------------------------TATAGGATACACATACACGTA-----------------------GAT--------------------ACATCTA----TGATAGACAC--------------------------CG--AATAAGAAATCA-ACTTAAAATTCT-TTTT-GTTTT----TTTTGTTTTTTTTGTTTTTGCA--TTTGGCATTGAGCCAAATAGTGAA-----AATAGCTGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACGCT--GTGTT-----------------------ATCCAAA---A------AATCA--------------------------------------ATCTA-----------TTTATAGGATCCGAGGATATCCGTGCCCATGAGGCGCCCCGTGCCTCTCGTCCCTAC
dm3 chr3R:11004162-11004381 - AATAGGCTAAAA--------------------------------------------------TATAGGATACACATACAG-GG-----------------------GGC--------------------GCATCTA----TGATAGAAAC--------------------------CG--AAT-AGAAATCATAC----A--TT------T--------------------------CTGCAGCGCTGGCATTGAGCCAAATAGTGAGAATAGAATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACGCG--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTAC
droSim2 3r:10224664-10224882 + AATAGGCTAAAA--------------------------------------------------TATAGGATACACATACA--GG-----------------------GGC--------------------GCATCTA----TGATAGAAAC--------------------------CG--AAT-AGAAATCATAC----A--TT------T--------------------------CTGCAGCGCTGGCATTGAGCCAAATAGTGAGAATAGAATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATCAACTAACGCG--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTAC
droSec2 scaffold_0:10947513-10947731 + AATAGGCTAAAA--------------------------------------------------TATAGGATACACATACA--GG-----------------------GGC--------------------GCATCTA----TGATAGAAAC--------------------------CG--AAT-AGAAATCATAC----A--TT------T--------------------------CTGCAGCGCTGGCATTGAGCCAAATAGTGAAAATAGAATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATCAACTAACGCG--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTAC
droYak3 3R:15430487-15430707 + AAA-------AA--------------------------------------------------TATAGGATACACATAGA--GG-----------------------GGC--------------------GCATCTA----TGATAGACAC--------------------------CG--AAT-AGAAATCA-ACTTAAT--TTT-T----GTGTGCTT----------------TTCTGCAGCGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TGA----------------------AT------AG-CAATGAACTAACGCC--GCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCTCCCCGTGCCTCTCGTCCCTAC
droEre2 scaffold_4770:10525701-10525924 - A-------------------------------------------------------------TATAGGATACACATAGA--GG-----------------------GGC--------------------GCATCTA----TGATAGACAC--------------------------CG--AAT-AGAAATCA-ACTTAAT--TTT-T----GTGCCCCT----------------TTCTGCAGCGCTGGCATTGAGCCAAATAGTGAAA----AATAGCCGAAATATT-------------TGA----------------------ATAGCAATAG-CAATGAACTAACGCC--GTGTT-----------------------ATCCAAA---C------A-------------------------------------------CCTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AAA-------AATGTGGCTGCTGCGCCAAGGCAAAATAACTAGGCGCTCA------------TATAGAAAATACAAAA------------------------------------------------------TTCA----AAATA----------------------CGAAACA-CAA--AAA-TGAAATCA-AT-------TT----------------------------------------TTTGGCAATGAGCCAAATATCTGA-----AATAGCACAAAACCT-------------TAT----------------------GA------AG-TAAAGCAAT--CCT---------------------------------AGT--GTACAT--CA-----------ATTAGTTATAATAT--TGTTAATTCGCTTG---CCAC-----------TCCACAGGTTCGGAGGATATTCGCGCCCATGAGACGCCAAGAGTCTCTCGCCCATACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCC...................2019.009003000000000000105000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGAGACGCCAAGAGT.............2015.005000000000000000000100200000000000000000000000000000000000001010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCATGAGACGCCAAGA...............1915.005000000000000000011000010000001000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGCCCATGAGACGCCA..................2013.003001000000000000001010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCGCGCCCATGAGACGCC...................2113.003001000000000000101000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCGCGCCCATGAGACGCCAAGAGT.............2713.003000000000000000000110010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAA.................2212.002000000000000000000010010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGAGACGCCAAGAGTCTCTC........2512.002000000000000000001000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAGACGCCAAGAGTCTCT.........2112.002000000000000000002000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGAGACGCCAAGAGTCTCTCGC......2712.002000000000000000002000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAGTCTCTCGCCC....1912.002000000000000000000110000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCGCGCCCATGAGAC......................1912.002000000000000000001010000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCATGAGACGCCAAGAGTCTCTCGCC.....2912.002000000000000000001010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCA..................2112.002001000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTCGCGCCCATGAGACGCC...................2312.002001000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAAGAGT.............2612.002000000000000001001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAGTCTCTCGCC.....1812.002020000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCATGAGACGCCAAGAGTCTCTCGC......2811.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGCCAAGAGTCTCTCGCCCA...2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCGCGCCCATGAGACGCCAAGAGT.............2811.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGCCAAGAGTCTCTCGCCC....2211.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGAGACGCCAAGAG..............1911.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGTCTCTCGCCCATA.1911.001000000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGAGACGCCAAGAGTCTCT.........2211.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTCGCGCCCATGAGACG.....................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCGCGCCCATGAGAC......................1811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATTCGCGCCCATGAGA.......................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGATATTCGCGCCCATGAGAC......................2511.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGCCCATGAGACGCCAAGAGT.............2411.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGATATTCGCGCCCATGAGACGCCA..................2811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGAGACGCCAAGAGTCT...........2211.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGAGACGCCAAGAGTCTCTCGCC.....2611.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGACGCCAAGAGTCTCTCGCCC....2411.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTCGCTTG---CCAC-----------TCCACAG..................................................2211.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCATCC...............2411.001000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGATATTCGCGCCCATGAGACGCC...................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCCCATGAGACGCCAAGAGTCTCT.........2711.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAAGAGTCT...........2811.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAAGAGTC............2711.001000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGCCCATGAGACGCCAA.................2111.001000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGCCCATGAGACGCC...................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAAGAG..............2511.001000000000000000000010000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGTCTCTCGCCCATA.1811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGCCCATGAGACGCCAAGAGTCT...........2711.001000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGTCTCTCGCCCATAC1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGCCCATGAGACGCCAAG................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCCAAGAGTCTCTCGCCC....2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAGACGCCAAGAGTCT...........1911.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGCCAAGAGTCTCTCGCCCA...2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGACGCCAAGAGTCTCTCGC......2211.001000000000000000010000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGCCCATGAGACGCCAAG................2111.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAGACGCCAAGAGTCTCTCGC......2411.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAGTCTCTCGCCCA...2011.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATTCGCGCCCATGAGA.......................2211.001000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCGCGCCCATGAGACGCCAAGAG..............2711.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGCCCATGAGACGCCAAGAG..............2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCATGAGACGCCAAGAGTCTCTC........2611.001000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGAGACGCCAAGAGTCTC..........2311.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCGGAGGATATTCGCGCCCATGAGAC......................2911.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGCCAAGAGTCTCTCGCCCAT..2511.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGGAGGATATTCGCGCCC.............................2111.001000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCATGAGACGCCAAGAGT.............2111.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGCCCATGAGACGCCAAGAGT.............2511.001000000000000000000010000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATTCGCGCCCATGAGA.......................2111.001000000000000000000010000000000000000000000000000000000000000000
droMoj3
AAA-------AATGCGGCTGTTGCGCCAAGGCAAAATAACTAGGCGCTCATATTG----------GGAATACAAAAGAA-----------------------------T--------------------GA---AA----TG---AAAAACGAAAA--------------GAAA-AAA--AAT-A-AAATGA-AATCAAT--TT----------------------------------------TTTGGCAATGAGCCAAATGGCTGA-----AATAGCGCAAAAATTC------------AGAAAAGCCTTATGAAGTAAGGCGAA--------------T-AAT--AGT---------------------------------AGT--GTATATAGAAA-TGTGCA----------TTAATAT----TTGATTCGTTTCCAAACAC-----------TCCATAGGCTCCGAGGATATTCGTGCCCATGAAGCGCCAAGAGCATCTCGCCCATACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAGCATCTCGCCCATAC2311.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATTCGTGCCCATGAA........................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGAGGATATTCGTGCCCATGAA........................2411.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCCAAGAGCATCTCGCC.....2011.001000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGAAGCGCCAAGAGC.............1911.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTCGTGCCCATGAAGCGCC...................2311.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAGCATCTCGCCC....1911.001000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGAAGCGCCAAGAGCATCTC........2511.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCGCCAAGAGCATCTCGCCC....2411.001000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCGTGCCCATGAAGCGCCA..................2211.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATTCGTGCCCATGAAG.......................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGCGCCAAGAGCATCTCGCCCA...2611.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCAAGAGCATCTCGCCC....2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGAAGCGCCAAGAGCATC..........2311.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTGCCCATGAAGCGCCAAG................2311.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATTCGTGCCCATGAAGC......................2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGCCAAGAGCATCTCGCC.....2111.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCCCATGAAGCGCCAA.................1911.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCATGAAGCGCCAAGAGCA............2211.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGAAGCGCCAAGAGCAT...........2211.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGAAGCGCCAAGAGCATCT.........2411.001000100
...................................................................................................................................................AAACGAAAA--------------GAAA-AAA--AA.............................................................................................................................................................................................................................................................................................................................................18190.051000010
droGri2
AAA-------AATGTGGCTGCTGCGCCAAGGCAAA---------------------------------------ATAGC--TA-----------------------GGC--------------------GCTCATA----TAAAA----C-TACAAAATTCAAAATAC--------GA--AAA-TGAAATCA-AT-------TT----------------------------------------TTTGGCAATGAGCCAAATAGCTGA-----AATAGCGCAAA-------------------------------------------A------CC-TAATGAAGTAAGACAA-TCCCC-----------------------ATAGTAAGTCCGT--CA-----------ATTTGATACAATATGTTGT---TTGTATTG---TCAC-----------TCCACAGGTTCCGAAGATATTCGCGCCCATGAGACCCCAAGAGCCTCTCGCCCATACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AAATT-------------------------------------------------GAAA-AAATATTG-----------------------------------------T--------------------GTATATA----------------------------------------------------------C----T--TTT-----A------------------------TTTTGT--ATTTGGCATTGAGCCAAATAGTA-A-----AATAGCCCACATAAC--------------------------------------------------TATGAGCAAAATTGGAGGAATTTACCATATAAATAACTATGCAAGCCCAAA---T------A-TATATATATATACGATATACTAAATTGA---T---TTTG---TCAATTATAATTTAAACAACAGGTTCCGAGGATATTCGCGCCCATGAGGCACCAAAAGCCAGCCGCCCATACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCCGAGGATATTCGC.................................1811.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGAGGCACCAAAAGCCAGC.........2211.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCGAGGATATTCGCGCCCATGAGGCA.....................2911.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGCCCATGAGGCACC...................2011.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCCGAGGATATTCGCGC...............................2011.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGAGGATATTCGCGCCCATGAG........................2511.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGCCCATGAGGCACCAAAAGCC............2711.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGGATATTCGCGCCCAT...........................2011.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCGCGCCCATGAGGCACC...................2211.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCGCGCCCATGAGG.......................1811.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGAGGATATTCGCGCCCATGAGGC......................2711.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCGAGGATATTCGCGC...............................1911.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGAGGATATTCGCGCCCATGAGGCACC...................2911.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGATATTCGCGCCCATGAGGCACC...................2711.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATTCGCGCCCATGAGGCACCA..................2711.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCGAGGATATTCGCGCC..............................2011.00100100
dp5
AAAACTCACA------------------------------------------CCC--------AAAAAATATACATAGA--TGTATTCCTATGTCGTTCATGTATCCGTGTATCCGAGTATCCGTGTCCGAGTATA----TGATAGAAAC--------------------------AA--AAT-AGAAATCA-ACTTTAT--TT------TGTGCTT-------------------------TGGCTGGCATTGAGCCAAATAGTGGA-----AATAGCTGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACACACAGGGGT-----------------------ATGGTATCTGC------G-------------------------------------------TGTA-----------TTTATAGGCTCTGAGGATATCCGTGCCCACGAGACGCCACGGGCATCCCGTCCCTACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCACGAGACGCCACGGGC.............2014.0040400000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCCCACGAGACGCCACG................2014.0040400000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCACGAGACGCCACG................1913.0030300000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGACGCCACGGGCATCCCGTC.....2312.0020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCACGAGACGCCACG................1812.0020100010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCTGAGGATATCCGTGC...............................2012.0020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTGCCCACGAGACGCCACGGGC.............2612.0020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTGCCCACGAGACGCC...................2012.0020200000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACGAGACGCCACGGGCATCCCGTCC....2811.0010000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCACGGGCATCCCGTC.....1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCACGGGCATCCCGTCCCTAT2411.0010001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATCCGTGCCCACGAGACGCC...................2611.0010000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGATATCCGTGCCCACGAGACG.....................2611.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACGGGCATCCCGTCCCTAC2211.0010001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCACGAGACGCCACGGGCATCCC........2611.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCCGTGCCCACGAGA.......................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTGCCCACGAGACGCCACGGGCA............2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCGTGCCCACGAGACGCCACGGGC.............2811.0010001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCACGGGCATCCCGTCCCT..2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCTGAGGATATCCGTGCCCAC...........................2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAGACGCCACGGGCATCCC........2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCCACGGGCATCCCGTCC....2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGATATCCGTGCCCAC...........................2011.0010000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCCACGGGCATCCCGTC.....2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCCCACGAGACGCCACGGGC.............2311.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACGAGACGCCACGGGCATCC.........2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCGTGCCCACGAGACGCCACGGGCA............2811.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCACGAGACGCCACGGGC.............2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCCACGGGCATCCCGTCCCTAC2511.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCCCACGAGACGCCACGGGCATCC.........2711.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGCCACGGGCATCCCGTCCCT..2411.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGAGACGCCACGGGC.............1811.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCACGGGCATCCCGTCCCT..2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCGTGCCCACGAGACGC....................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCGTGCCCACGAGACGCCACG................2511.0010000000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCTGAGGATATCCGTGCCCA............................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCACGAGACGCCACGGG..............2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGACGCCACGGGCATCCCG.......2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCACGGGCATCCCGTCCCTAC2411.0010100000000
droPer2
AAAACTCACA------------------------------------------CCC--------AAAAAATATACATAGA--TGTATTCCTATGTCGTTCATGTATCCGTGTATCCGAGTATCCGTGTCCGAGTATA----TGATAGAAAC--------------------------AA--AAT-AGAAATCA-ACTTTAT--TT------TGTGCTT-------------------------TGGCTGGCATTGAGCCAAATAGTGGA-----AATAGCTGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACACACAGGGGT-----------------------ATGGTATCTGC------G-------------------------------------------TGTA-----------TTTATAGGCTCTGAGGATATCCGTGCCCACGAGACGCCACGGGCATCCCGTCCCTACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCACGAGACGCCACG................1914.004040000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGATATCCGTGCCCACGAGA.......................2512.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATCCGTGCCCACGAGACGCCA..................2712.002000002
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCCCACGAGACGCCACGGGCATC..........2611.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTGCCCACGAGACGCCACGGGC.............2611.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGATATCCGTGCCCACGAGAC......................2611.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATCCGTGCCCACG..........................1911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATCCGTGCCCACGA.........................2011.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGAGGATATCCGTGCCCACGAGAC......................2711.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCCCACGAGACGCCACG................2011.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGATATCCGTGCCCA............................1911.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGAGGATATCCGTGCC..............................2011.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGATATCCGTGCCC.............................1911.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCACGAGACGCCACGG...............2011.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGCCACGGGCATCCCGTCCCT..2411.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGATATCCGTGCCCACGA.........................2111.001010000
droAna3
AAATCTC--A------------------------------------------TCGAAA-AAATAT-----------------C-----------------------TGT--------------------GTATCTA----TGATAGACAC----AG--------------CACACCAA--AAA-AGAAATCA-ACTTAAA--TTT-T----TTTCT----TCTTAATTTTGTTGTTCTCGCCTCGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATTTTGAATGTATATTTGA----------------------AA------AG-CAATGAACTAACGCT--GGGTT-----------------------ATCCAAA---C------C-------------------------------------------TCTA-----------TTTATAGGCTCTGAGGATATCCGCGCCCACGAGGCGCCAAGGGCTTCTCGTCCCTACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCTGAGGATATCCGCGC...............................2014.004301000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCCCACGAGGCGCCAAGGGCT............2412.002100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGATATCCGCGCCCACGAGGC......................2612.002011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGATATCCGCGCCCACGAGGC......................2512.002110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGATATCCGCGCCCA............................2012.002100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGATATCCGCGCCCACG..........................2012.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGCGCCAAGGGCTTCT.........2012.002000002
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCACGAGGCGCCAAGGGCTTCTC........2512.002000002
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCACGAGGCGCCAAGGGCTTCT.........2412.002002000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATCCGCGCCCACGAGGC......................2111.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCCACGAGGCGCCAAGGGCTTCTCG.......2811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCGCGCCCACGAGGC......................1911.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGCCCACGAGGCGCCAAGGGCTTCT.........2811.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCTGAGGATATCCGC.................................1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCCCACGAGGCGCCAAGGGCTTCTCG.......2911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGGCTTCTCGTC.....1811.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCGCCCACGAGGCGCCAAGGGCT............2711.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGAGGATATCCGCGCCC.............................2111.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGCCCACGAGGCGCCAAGGGCT............2511.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCACGAGGCGCCAAGGGCTTCTCG.......2711.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCTGAGGATATCCGCGCCCA............................2311.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGATATCCGCGCCCACGAGGCGC....................2811.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGATATCCGCGCCCACGAGGCGCC...................2911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGATATCCGCGCCC.............................1811.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGCCCACGAGGCGCCAAGGGCT............2611.001100000
droBip1
AAATCTC--A------------------------------------------TCGAAAGAAATAT-----------------C-----------------------TGT--------------------GTATCTA----TGATAGACAC-TACAC--------------CACA-CAA--AAT-AGAAATCA-ACTTAAT--TTT-T----TTTCTTGATTCTTAATTTTGTTGTTCTCGCCTGGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCCAAATATTT-GAATGTATATTTGA----------------------AA------AG-CAATGAACTAACGCT--GGGTT-----------------------ATCCAAA---C------C-------------------------------------------TCTA-----------TTTATAGGCTCTGAGGATATCCGCGCCCACGAGGCGCCAAGGGCCTCTCGTCCCTACSizeHit CountTotal NormTotal
No Reads
droKik1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TCT----------------------AG------CGCCAATGGACTAACGTT--CGGTT-----------------------ATCCAAA---T------A-------------------------------------------CTTA-----------TTTATAGGCTCCGAGGATATCCGCGCCCACGAGGCGCCCAGGGCCTCTCGCCCCTACSizeHit CountTotal NormTotal
No Reads
droFic1
GAA-------AA--------------------------------------------------TATAGGATACACATATA--GA-----------------------GGC--------------------GCATCTA----TGATAGACAC--------------------------CG--AAT-AGAAATCA-ACATGAT--TT------TGTGTTTTT----------------TTTTGGTCCGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACGCT--GGGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTTATAGGCTCCGAGGATATCCGCGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTACSizeHit CountTotal NormTotal
No Reads
droEle1
AAA-------AA--------------------------------------------------TATAGGATACACATGGG--GC-----------------------GGC--------------------GCATCTATGTATGATAGACAT--------------------------CG--AAT-AGAAATCA-ACTTAAT--TT------T--------------------------TTGCCCCGTTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAAAGCGCTGGGTT-----------------------ATCCAAA---C------A-TCTACC----------TCTAT-----------------C---TCTA-----------TTTATAGGCTCCGAGGACATCCGTGCCCACGAGGCGCCGCGTGCATCTCGTCCCTACSizeHit CountTotal NormTotal
No Reads
droRho1
AAA-------AA---------------------------------------------------ATAGGATACACATGCG--GC-----------------------GGG--------------------GCATCTA----TGATACACAT--------------------------CG--AAT-AGAAATCA-ACTTAAT--TT------T--------------------------TTGCCCCGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACGCGCTGGGTT-----------------------ATCCAAA---C------A-------------------------------------------TCTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCGCGTGCCTCTCGTCCCTACSizeHit CountTotal NormTotal
No Reads
droBia1
AAG-------AA--------------------------------------------------TATGGGATACACATACAGAGG-----------------------GGC--------------------GCATCTA----TGATAGACAC--------------------------AG--AAT-AGAGATCA-ACTCGGC--TTTT----T--------------------------TTGCCCCGCTGGCATTGAGCCAAATAGTTAA-----AATAGCCGAAATATT-------------TGA----------------------A-------AG-CAATGAACTAACGCG--GCGTT-----------------------ATCCAAA---C------A-------------------------------------------CCTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTACSizeHit CountTotal NormTotal
No Reads
droTak1
AAA-------AA--------------------------------------------------TATAGGATACACATAGA--GG-----------------------GGC--------------------GCATCTA----TGATAGACAC--------------------------CGAAAAA-AGAAATCA-ACTTAAT--TTT-T----------------------------TTTTGCACCGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACGCC--GCGTT-----------------------ATCCAAA---C------A-------------------------------------------TCTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTACSizeHit CountTotal NormTotal
No Reads
droEug1
AAA--------A--------------------------------------------------TATAGGATACACATACACGTA-----------------------GAT--------------------ACATCTA----TGATAGACAC--------------------------CG--AATAAGAAATCA-ACTTAAAATTCT-TTTT-GTTTT----TTTTGTTTTTTTTGTTTTTGCA--TTTGGCATTGAGCCAAATAGTGAA-----AATAGCTGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACGCT--GTGTT-----------------------ATCCAAA---A------AATCA--------------------------------------ATCTA-----------TTTATAGGATCCGAGGATATCCGTGCCCATGAGGCGCCCCGTGCCTCTCGTCCCTACSizeHit CountTotal NormTotal
No Reads
dm3
AATAGGCTAAAA--------------------------------------------------TATAGGATACACATACAG-GG-----------------------GGC--------------------GCATCTA----TGATAGAAAC--------------------------CG--AAT-AGAAATCATAC----A--TT------T--------------------------CTGCAGCGCTGGCATTGAGCCAAATAGTGAGAATAGAATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATGAACTAACGCG--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATCCGTGCCCAC...........................1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCACGAGGCGCCCCGTGCC............2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACGAGGCGCCCCGTGCC............2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCGTGCCTCTCGTCCC...1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCCTCTCGTCCCTAC1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000200000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGAGGATATCCGTGCC..............................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCGTGCCTCTCGTCCCTAC2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGAGGCGCCCCGTGCC............1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGCCTCTCGTCCCTAC1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAGGCGCCCCGTGCC............1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCCCGTGCCTCTCGTCCCT..2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCACGAGGCGCCCCGTGCCTCTCG.......2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCGTGCCTCTCGTCCCT..2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCACGAGGCGCCCCGTGCC............2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAGGCGCCCCGTGCCTCTC........2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATCCGTGCCCACGAGGC......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGCGCCCCGTGCCTCTCGTCCCT..2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGAGGATATCCGTGCC..............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................ACGCG--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------........................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCGCCCCGTGCCTCTCGTCCC...2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGCCCCGTGCCTCTCGTCCC...2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCGTGCCTCTCGTCC....1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGCCCACGAGGCGCCCCGT...............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCCCACGAGGCGCCCCGT...............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGCCCACGAGGCGCCCCG................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCCGAGGATATCCGTGCCCACGAG........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATCCGTGCCCACGAG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCCGAGGATATCCGTGCC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGCCCCGTGCCTCTCGTCCCTAC2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCGTGCCTCTCGTCCCTAC2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GTGAGAATAGAATAGCCGAA........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AACGCG--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------.........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GAATAGAATAGCCGAAATATT-------------......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGCGCCCCGTGCCTCTCGTCCCTAC2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGAGGCGCCCCGTGC.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GTGAGAATAGAATAGCCGA.........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCGCCCCGTGCCTCTCGTC.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCCGAGGATATCCGT.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................GAGAATAGAATAGCCGAA........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGCGCCCCGTGCCTCTCGTCCC...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATCCGTGCCCACG..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATCCGTGCCCACGAGGCG.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCGTGCCCACGAGGCG.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CG--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTTATA...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATCCGTGCCCACGAGG.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGAGGATATCCGTGC...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGCCTCTCGTCCCTA.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATCCGTGCCCACGA.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCCGTGCCTCTCGTCCC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGCCCACGAGGCGCCCCGTGCG............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TT-------------TGA----------------------AA------AG-CAATGAACT.........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TAGCCGAAATATT-------------TGA----------------------AA------AG-CAATGAATC.........................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCCCGTGCCTCTCGTCC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGGATATCCGTGCCCACGA.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCGTGCCCACGAGGCGCCCCG................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGAGGATATCCGT.................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATCCGTGCCCACGA.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GA----------------------AA------AG-CAATGAACTAACGCG--TCG..............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................G--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACT.....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGGATATCCGTGCCC.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GAACTAACGCG--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGGATATCCGTGCCCA............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGAGGCGCCCCGTGCCTCT.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CGCG--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTT......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCCGTGCCCACGAGG.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCCGAGGATATCCGTGC...............................2011.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AATAGGCTAAAA--------------------------------------------------TATAGGATACACATACA--GG-----------------------GGC--------------------GCATCTA----TGATAGAAAC--------------------------CG--AAT-AGAAATCATAC----A--TT------T--------------------------CTGCAGCGCTGGCATTGAGCCAAATAGTGAGAATAGAATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATCAACTAACGCG--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCCCGTGCCTCTCGTCCC...2112.00200200000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCGTGCCTCTCGTCCCTA.2112.00200200000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGCCCACGAGGCGCC...................1911.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCCTCTCGTCCCTAC1811.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGAGGATATCCGTGCCCACGAGGC......................2711.00100000000000100000
...................................................................................................................................................................................................................................................................AATAGTGAGAATAGAATAGCCGAAA.......................................................................................................................................................................................................................................2511.00100100000000000000
droSec2
AATAGGCTAAAA--------------------------------------------------TATAGGATACACATACA--GG-----------------------GGC--------------------GCATCTA----TGATAGAAAC--------------------------CG--AAT-AGAAATCATAC----A--TT------T--------------------------CTGCAGCGCTGGCATTGAGCCAAATAGTGAAAATAGAATAGCCGAAATATT-------------TGA----------------------AA------AG-CAATCAACTAACGCG--TCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCACGAGGCGCCCCGTGCC............2211.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGCCCACGAGGCGCCCCG................2111.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTGCCCACGAGGCGCCCCG................2311.0010100
..............................................................................................................................................................................................................................................................................................TT-------------TGA----------------------AA------AG-CAATCAACTAACGC....................................................................................................................................................................2311.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCACGAGGCGCCCCGTGCC............2311.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGCCCACGAGGCGCCCCGT...............2311.0010100
droYak3
AAA-------AA--------------------------------------------------TATAGGATACACATAGA--GG-----------------------GGC--------------------GCATCTA----TGATAGACAC--------------------------CG--AAT-AGAAATCA-ACTTAAT--TTT-T----GTGTGCTT----------------TTCTGCAGCGCTGGCATTGAGCCAAATAGTGAA-----AATAGCCGAAATATT-------------TGA----------------------AT------AG-CAATGAACTAACGCC--GCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCTCCCCGTGCCTCTCGTCCCTACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTGCCCACGAGGCTCCCCGT...............2412.00200000020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATCCGTGCCCACGAGGCT.....................2412.00201000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGATATCCGTGCCCACGAGGCT.....................2512.00201000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCACGAGGCTCCCCGTGCCTCTCGTCCCT..3312.00200000000002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGCCCACGAGGCTCCCCGTGCC............2511.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCCGTGCCCACGAGGC......................2011.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATCCGTGCCCACGA.........................2011.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCGTGCCCACGAGGCTCCCC.................2311.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCACGAGGCTCCCCGTG..............1911.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCCGTGCCCACGAGGCTCCCCGT...............2711.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGAGGCTCCCCGTGCCTCTCGTCCC...2811.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATCCGTGCCCACGAG........................2111.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCCCCGTGCCTCTCGTCCC...2211.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCCGTGCCCACGAGGCTCCC..................2411.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGCCCACGAGGCTCCCCGT...............2211.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................C--GCGTT-----------------------ATCCAAA---C------A-------------------------------------------ACTA-----------TTT......................................................2211.00101000000000
droEre2
A-------------------------------------------------------------TATAGGATACACATAGA--GG-----------------------GGC--------------------GCATCTA----TGATAGACAC--------------------------CG--AAT-AGAAATCA-ACTTAAT--TTT-T----GTGCCCCT----------------TTCTGCAGCGCTGGCATTGAGCCAAATAGTGAAA----AATAGCCGAAATATT-------------TGA----------------------ATAGCAATAG-CAATGAACTAACGCC--GTGTT-----------------------ATCCAAA---C------A-------------------------------------------CCTA-----------TTTATAGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCGTGCCTCTCGTCCCTAC2213.0031101000
...................................................................................................................................................................................................................................................................................TAGCCGAAATATT-------------TGA----------------------ATAGC........................................................................................................................................................................................2111.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGCGCCCCGTGCCTCTCGTCCCTAC2811.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGAGGATATCCGTGCCCACGAGGC......................2611.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCCCCGTGCCTCTCGTCCC...2211.0011000000
......................................................................................................................................................................................................................................................................................................................................ATAGCAATAG-CAATGAACTAAC......................................................................................................................................................................2211.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGCCCACGAGGCGCCCCG................2211.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTGCCCACGAGGCGCC...................2011.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGAGGATATCCGTGCCA.............................2111.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGAGGCGCCCCGTGCCTCT.........2211.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATATCCGTGCCCACG..........................1911.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCACGAGGCGCCCCGTGCC............2311.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCCGTGCCCACGAGGC......................2011.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCCGTGCCCACGAGGCGCCCCG................2611.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCGTGCCTCTCGTCCC...1811.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATCCGTGCCCACGAGGCGCCC..................2511.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCCGTGCCCACGAGGCGCCCCGTGC.............2911.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCGTGCCCACGAGGCGCCCC.................2311.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGGATATCCGTGCCCA............................1911.0011000000
.......................................................................................................................................................................................................................................................................................................................................................ACTAACGCC--GTGTT-----------------------ATCCAAA---...........................................................................................................................2111.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGCGCCCCGTGCCTCTCGTCCC...2511.0011000000

Generated: 05/16/2015 at 11:22 PM