ID:

dvi_15760

 Coordinate:

scaffold_13047:6841768-6841918 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_8618:1]; CDS [Dvir\GJ23265-cds]; intron [Dvir\GJ23265-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACCACCAACTTCATCCAAATCAGCACCACCAAAATCATCTCTTTAGAGACGTATGTATATGATTAAATAAAAAACGATCAATGAACAGTAAAAGTAAATGTATATCTTAAAGTAAAAGTAACAGTAAAAGTAATTTGTAGTTGCCCGTTCTTGCTTACACCGACTCAGACTAACACTCGTTCTCGCACACACACACACACTTAACTATCGCTCAGCAATTCCTAAACCTGTTTTTATACCCTCTTAGCTTT
**************************************************........................(((..(((((..(((...(((...((((.......(((.....(((((..((((.....))))..))))).....)))...))))...)))...))).....))))).)))................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060679
140x9_testes_total
 V047
embryo
 SRR060657
140_testes_total
 M061
embryo
.....................................................................................................................................................................CGGACTAACACTCGTTCTCGC................................................................. 21 1 1 1.00 1 0 1 0 0 0
....................CAGCACCACCAAAATCATCTCTTTA.............................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
AACACTAACTTCATCTAAATC...................................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 1 0 0
...................................................TATGTAGATGATTATATAAAA................................................................................................................................................................................... 21 2 4 0.25 1 0 0 0 1 0
....................TAGCACCATCAAAATCAGCTC.................................................................................................................................................................................................................. 21 3 5 0.20 1 0 0 1 0 0
........................................................ATATTATTAAATAAATAATGATC............................................................................................................................................................................ 23 3 17 0.06 1 0 0 1 0 0
..................TTCAGGACCACCAAAACCA...................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

TGGTGGTTGAAGTAGGTTTAGTCGTGGTGGTTTTAGTAGAGAAATCTCTGCATACATATACTAATTTATTTTTTGCTAGTTACTTGTCATTTTCATTTACATATAGAATTTCATTTTCATTGTCATTTTCATTAAACATCAACGGGCAAGAACGAATGTGGCTGAGTCTGATTGTGAGCAAGAGCGTGTGTGTGTGTGTGAATTGATAGCGAGTCGTTAAGGATTTGGACAAAAATATGGGAGAATCGAAA
**************************************************........................(((..(((((..(((...(((...((((.......(((.....(((((..((((.....))))..))))).....)))...))))...)))...))).....))))).)))................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060669
160x9_females_carcasses_total
 M047
female body
 SRR060676
9xArg_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060678
9x140_testes_total
 V053
head
 SRR060659
Argentina_testes_total
 M028
head
 SRR060666
160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060663
160_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 V047
embryo
 M027
male body
..................................................................................................................................................................................................................GAGTCGTTAAGGATTTAGA...................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................TGCTTACATATACTCATTTAT...................................................................................................................................................................................... 21 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...TAGTTAAAGTAGGTTTAGTAGTG................................................................................................................................................................................................................................. 23 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................TCTGCTTACATACACTCATTTAT...................................................................................................................................................................................... 23 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GGGCCAGAACGAATAGGGCT........................................................................................ 20 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................TGCTTACATACACTAATTTAT...................................................................................................................................................................................... 21 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......TGAAGTCGGTTCAGTCATG................................................................................................................................................................................................................................. 19 3 17 0.29 5 1 0 0 0 0 0 0 2 0 0 0 2 0 0 0 0
..................................................................................................................................................................................................................GAGTCGTTAAGGATTTAGATC.................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................CGGGCCAGAACGAATAGGGC......................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................GCCAGAACGAATAGGGCT........................................................................................ 18 3 18 0.17 3 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................GGCCAGAACGAATAGGGCT........................................................................................ 19 3 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTTGTGATTTGATAGCGCGT..................................... 20 3 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................TGTCGTGATGGTTTTAGT...................................................................................................................................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......TGAAGTCGGTTCAGTCATGG................................................................................................................................................................................................................................ 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....GTTAAAGTAGGTTTAGTAG................................................................................................................................................................................................................................... 19 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTAAAGTAGGTTTAGTAGTGA................................................................................................................................................................................................................................ 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................CACTTACCTATAGACTTTCAT......................................................................................................................................... 21 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTGTGGCTGAGACTTATTG............................................................................. 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................GGCCAGAACGAATAGGGC......................................................................................... 18 3 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TACTTGTCATGTTGATTTA........................................................................................................................................................ 19 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............CGGTATAGTCGTGGAGGTT........................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TCGTGGTAGATTTAGGAGA................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................TAAACATCAACGCAGAAGAA................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:6841718-6841968 - dvi_15760 ACCACCAACTTCAT---CCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTAT----ATGATTAAATA---AAAAAC-----GATCAATG--------------------------------AA----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTAAAAGTAAATGTATATCTTAAAGTAAA---------------------------------------------------------AGTAA-------------------------------CAGTAAAAGTAATTT-------GT--AGTTGCCCGTT---CTTGCTTACACCGACTCAGACTAA----------------------------------CACTC--G-------------------------TTCTCG--------CACACACACACACACTTAACTATCGCTCAGCAATTCCTAAACCTGTTTTTATA--CCCTCT-TAGCTTT
droMoj3 scaffold_6540:2703792-2704086 - ACCACCAACTTCAT---CCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTAT-ATGATAA----ATA---AGAAAC-AAA-------------------------------------------------AAGTAA------ACCCACCAA---------------ACAGCAT-------------------------------------------------------------------------------------------------------TCAATGAAACCTA------------------AAAGTAAA---------------------------------------------------------CCTAA-------------------------------AAGTAAAAGTAATTTCGTTTATGT--AGTTGCTAGCT---CACTC------------TCACACTCT--------CTCTCTCTCTCTCTCTCTCTGTATAACTCTCTTTCTCTCTCTG---------TCTGTCTCACG--------CACA-ACCCACACACTTAACTATCGTTCAGCAATTCTTAAGCACGCTTTTATATAGTCTGT-AAGCTCT
droGri2 scaffold_14830:2716355-2716631 - ACCACCAACTTCAT---CCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTAT-ATAATGAAAA---AAAC-------AAAAA-ACAAAA-------------------------------------------------------------------------------------------------------------A--CATAAACAAATATTAAAACCAA----------------------------------------------------TCAATGATCCCTTAAAGTAAAAGTACAATAAGAAGTATT---------------------------------------------------------TGTAA-------------------------------AAGTAAAAGTAAATC-------GT--AGTTCATAGTTACTTTCGCTCTCACTCACTCACTC----GCTCGCTCTCTACCTATCTCTCTC---------------------------------------------ACATACACGTTCACA-AGCCA--ACCTCAACTATCGCTCAGCAATTCCTTA--------------------------TCT
droWil2 scf2_1100000004902:4853414-4853627 - ACCACCAACTTCAT---CCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTAT----ATGAGCA-ACAACA-------AAATGAATCAAG-----------------------AAA---T--CTTCCTCTATGTAT------AT-------GTAGA---------------------------------------------------------------CCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACTAT----------CTATCTATCTATCTAACACAGAAATATGCTTATTCTTTCTACCACTTTAATTGCT------------------------GACCCACTTATATTTTGCCCATCCGTTTTTAAA-------------------GTAA-TCGC
dp5 XR_group8:3610936-3611162 - GACTGAAAATTCTC---TCAA-AGCTAAACC-CAGTAAATTATTTTTGTATATG----------------------------------------------------------------------------------CGTCTGATTTC------GTGTGCCAT--ACGAGGAGAGGAGGAGGAGGAGGAGAGGAAGATCGGGAGATCGGGAGAGTAAGGAGTAAGCAGCAGCAG------------------------------------------------------------------------------------------GAG---------------------------------------------------------AAAGA-------------------------------ATGCGAAAGAGAGTT-------GG--CGCTGCCAGTC---CACCAT-----------------------------------TCCACAGCACACACAAACACAC-------------------------------ACA--------CACACATACA-----------------------------CA---------------C--CCCAA-GCTA
droPer2 scaffold_34:620691-620826 - AACAACAACAACC----------------------------ACCACCACAGTGAT-AATAGTAT------------------------------------------------------------------------------------------------------------------------TAATGAGAATAATTACGAGTTTAAGAA--TAGGGATAAAGATGAAGCTAAA------------------------------ACAAATGTAAGTGATAGCAAAA---------------------------------------TGA------------------------------------------------------CGCTA-------------------------------CAGCAAATGTCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCA-GTCG
droAna3 scaffold_13340:11879287-11879487 - ACCACCAACTTCATCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTACTTCTAAGTCT------GTGTACCGT--ACAG------------------------------------------------TA------ATCTAACCCTATATAAA---CCCCCCACCGTAACACCGGTCACCATTGTCATTAG---TTGCT---------------------------------------CCAC------T-AACTGCACACA---------------------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTA-GCCC
droBip1 scf7180000396691:769053-769253 - ACCACCAACTTCATCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTACTTCTAAGTCT------GTGTACCGT--ACAG------------------------------------------------TA------ATCTAACCCTATAA-GA--ACCCCCTAACGTCACACCGCTCACCATTATCATTAG---TTGCT---------------------------------------CCAC------T-AACTGCACACA---------------------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTA-GCCC
droKik1 scf7180000302809:457670-457867 - ACCACCAACTTCATCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTTCTTCTATGTCTATGTCTGTGTGCCGTGTACAG------------------------------------------------TA------ATCTAACCCTAGATTGA--GCCC-CCA------CCCCGC---CCATTGTCATTAG---TTGCT---------------------------------------TCAC------T-AACTGCACA-----------------------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTA-GCCC
droFic1 scf7180000453800:322205-322392 + ACCACCAACTTCTTCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTTCTTCTAAGTCT------GT-------GTACAG------------------------------------------------TA------GTCTAACCCTAGAGTGA--ATCC-C-T------------TCACCATTATCATTAG---TTGCT---------------------------------------CCAC------T-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTGCCGCA---CCCAAA---------------C--CTTTA-GCCC
droEle1 scf7180000491214:2352629-2352858 + AGCAACAACAGAAGCAAC----AACATCAAC-AACAAAAGCCACAGCAGAAATCC-TTGTATAC------AA----ATT----------------------------------AGA--------AAA-----------------------------------------------------------------------GCAAATTGACGGG--AAGGGGGAAAGCAGTTGGT------------------------TCGGCGATAGCAAGTGGGTTGAG---TTGGG---------------------------------------CTGG------T-GACGGCACATAAATATTTATTAAAGACGAACCAACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCACACACTCAGCGATATCCTTGCAATCCTGCAGCCTGCATTAATA--TCCTGT-GTGTTTT
droRho1 scf7180000776529:38980-39107 - AACAACAACAA------CCAC-AACAGCAGC-AGCAACAACATTTGCTA-GT------GTGTAA--CAAT---CAAATA---AATAACA-AC-----AATAATAGCAGCAATAGTT--------GTCACAACAGTTAT---CAAT-----------------------ATAGTTACAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAA-TAAT
droBia1 scf7180000302075:3320743-3320954 + ACCACCAACTTCATCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTTCTTCTAAGTCT------GT-------GTAGCG------------------------------------------------TA------GTCTAACCCTAGATTGAGAGCCC--CA------------CCACCACTGTCATTAG---TTGAT---------------------------------------CCACATCCGCTGAATTGCACACA-----------------------CACACACACAC--------------------------------------ACAGTTATACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTA-CCCC
droTak1 scf7180000415245:177388-177501 + AACATC---TTCAG---CCAAGAACAGCAGCCACTA-ACAAATTGTTTGAGAAACTATATGAGTAACTAAAAAAA---AA-A-------GGAAAAATTAAA--------------------------------ATACATG-AAATAT------GT---------AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------------------------ATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AGCA
droEug1 scf7180000409246:185754-185939 + ACCACCAACTTCATCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTTCTTCTAAGTCT------GT-------GTAGCG------------------------------------------------TA------ATCTAACCCGA------------------------------ACCATTATCATTAGTAGTTGCT---------------------------------------CGAC------TTAACTGCACACA-----------------------CCCTTACACAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------CC---------------T--TTTAA-GCCC
dm3 chr2R:7096246-7096389 + C--AACCACATCAT---CAGC-AACAACAAT-AAT--AATAATAACAATAACAAC-ACAAGTAA--------------------------------------------------TA--------ATAACAACAACAAC---CACC-----------------------ACAGTGATAATAGTATTAGTGAGAATAATTATGAATTTAAGAG--TAGAGATAAAGCAA------------------------------------------GTCTAAGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAG
droSim2 2r:7813616-7813742 + C--AACCACATCAT---CAGC-AACAACAAT-AATAA--TAATAACAATAACAAC-ACAAATA--------------------------------------------------ATA--------ATAACAACAACAAC---CACC-----------------------ACAGTGATAATAGTATTAGTGAGAATAGTTATGAATTTAAGAG--TAGAGATAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_5:2782287-2782438 + ACCACCTGCACCACCATC-GC-GGCAGTACG-GCCGTAG-------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGACAAGATCACCAACCTGAATA--CGGTAA--------------------------------------------------GTCAAGGGG-------A-TCCTTAAAATCAA------------------ACAAAACA---------------------------------------------------------CCAAAAAATCATGGATTTTAAATTTCATCGAAGATTAACTAAAAGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG
droYak3 X:6882316-6882474 + ATTAGCAACATCTG---CAAC-ATCAGCAAC-AATCC-TAAGCTATGTA-GT------GTACTC--TAAT---GCAACC---AATATGG-CA-----AATGGCATATT-----GCAAAATCAAAGCAACGAAATTTAC---GAAT-----------------------TTATATA-------------------------------------------------------------------------------------------------------------------------------------------------------CAAC------TAACCAACACACA------------------------------------CAC-------------------------------CCACACACACACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAA-ATAA
droEre2 scaffold_4690:9288331-9288445 + AAAAACGAAAAGAAAAGCCAA-CACA--------------------------------------------------------------------------------------A----------------------------------------------------------GTTGACATAGAAATTGTACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGAAAATGATTT-------GTGTGC--------C---CCCTGT----GCCACACAGACACA----------------------------------CACAC--G-------------------------CACACG--------CACACA-----------------------------------------------------CACAC-ACAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ACCACCAACTTCAT---CCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTAT----ATGATTAAATA---AAAAAC-----GATCAATG--------------------------------AA----------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTAAAAGTAAATGTATATCTTAAAGTAAA---------------------------------------------------------AGTAA-------------------------------CAGTAAAAGTAATTT-------GT--AGTTGCCCGTT---CTTGCTTACACCGACTCAGACTAA----------------------------------CACTC--G-------------------------TTCTCG--------CACACACACACACACTTAACTATCGCTCAGCAATTCCTAAACCTGTTTTTATA--CCCTCT-TAGCTTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................CAGCACC-ACCAAAATCATCTCTTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
ACCACCAACTTCAT---CCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTAT-ATGATAA----ATA---AGAAAC-AAA-------------------------------------------------AAGTAA------ACCCACCAA---------------ACAGCAT-------------------------------------------------------------------------------------------------------TCAATGAAACCTA------------------AAAGTAAA---------------------------------------------------------CCTAA-------------------------------AAGTAAAAGTAATTTCGTTTATGT--AGTTGCTAGCT---CACTC------------TCACACTCT--------CTCTCTCTCTCTCTCTCTCTGTATAACTCTCTTTCTCTCTCTG---------TCTGTCTCACG--------CACA-ACCCACACACTTAACTATCGTTCAGCAATTCTTAAGCACGCTTTTATATAGTCTGT-AAGCTCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ACCACCAACTTCAT---CCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTAT-ATAATGAAAA---AAAC-------AAAAA-ACAAAA-------------------------------------------------------------------------------------------------------------A--CATAAACAAATATTAAAACCAA----------------------------------------------------TCAATGATCCCTTAAAGTAAAAGTACAATAAGAAGTATT---------------------------------------------------------TGTAA-------------------------------AAGTAAAAGTAAATC-------GT--AGTTCATAGTTACTTTCGCTCTCACTCACTCACTC----GCTCGCTCTCTACCTATCTCTCTC---------------------------------------------ACATACACGTTCACA-AGCCA--ACCTCAACTATCGCTCAGCAATTCCTTA--------------------------TCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ACCACCAACTTCAT---CCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTAT----ATGAGCA-ACAACA-------AAATGAATCAAG-----------------------AAA---T--CTTCCTCTATGTAT------AT-------GTAGA---------------------------------------------------------------CCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACTAT----------CTATCTATCTATCTAACACAGAAATATGCTTATTCTTTCTACCACTTTAATTGCT------------------------GACCCACTTATATTTTGCCCATCCGTTTTTAAA-------------------GTAA-TCGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
GACTGAAAATTCTC---TCAA-AGCTAAACC-CAGTAAATTATTTTTGTATATG----------------------------------------------------------------------------------CGTCTGATTTC------GTGTGCCAT--ACGAGGAGAGGAGGAGGAGGAGGAGAGGAAGATCGGGAGATCGGGAGAGTAAGGAGTAAGCAGCAGCAG------------------------------------------------------------------------------------------GAG---------------------------------------------------------AAAGA-------------------------------ATGCGAAAGAGAGTT-------GG--CGCTGCCAGTC---CACCAT-----------------------------------TCCACAGCACACACAAACACAC-------------------------------ACA--------CACACATACA-----------------------------CA---------------C--CCCAA-GCTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................CGGGAGATCGGGAGAGTAAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000002
................................................................................................................................................................................................................................................................................................................................................................................................AAGA-------------------------------ATGCGAAAGAGAGTT-------GG--C...........................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................................................GGAGGAGGAGAGGAAGATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAAGAGAGTT-------GG--CGC.........................................................................................................................................................................................1811.0011000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGAAAGAGAGTT-------GG--............................................................................................................................................................................................1711.0010000000001
..................................................................................................................................................................................................................................................................................................................................................................................................GA-------------------------------ATGCGAAAGAGAGTT-------GG--C...........................................................................................................................................................................................2011.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAAAGAGAGTT-------GG--CGCTGC......................................................................................................................................................................................2211.0010100000000
........................................TATTTTTGTATATG----------------------------------------------------------------------------------CGTCTGATTTC------GT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
........................................................................................................................................CGTCTGATTTC------GTGTGCCAT--A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................TTGTATATG----------------------------------------------------------------------------------CGTCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.0010000000001
............................................................................................................................................................TGCCAT--ACGAGGAGAGGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................GAG---------------------------------------------------------AAAGA-------------------------------ATGCGAAAGAGA..........................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................AAAGA-------------------------------ATGCGAAAGAGAGTT-------G...............................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................T--ACGAGGAGAGGAGGAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................................TGTATATG----------------------------------------------------------------------------------CGTCTGATTTC------GT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................ATTTTTGTATATG----------------------------------------------------------------------------------CGTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..............................................................................................................................................................................GAGGAGGAGGAGGAGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.1720200000000
............................................................................................................................................................................AGGAGGAGGAGGAGGAGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.0910000001000
.............................................................................................................................................................................GGAGGAGGAGGAGGAGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.0810100000000
..........................................................................................................................................................................AGAGGAGGAGGAGGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
droPer2
AACAACAACAACC----------------------------ACCACCACAGTGAT-AATAGTAT------------------------------------------------------------------------------------------------------------------------TAATGAGAATAATTACGAGTTTAAGAA--TAGGGATAAAGATGAAGCTAAA------------------------------ACAAATGTAAGTGATAGCAAAA---------------------------------------TGA------------------------------------------------------CGCTA-------------------------------CAGCAAATGTCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCA-GTCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................GATGAAGCTAAA------------------------------ACAAATGTAAGT....................................................................................................................................................................................................................................................................................................................................................................2411.001000001
..........................................................................................................................................................................................................GTTTAAGAA--TAGGGATAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..............................................................................................................................................................................................................................AGATGAAGCTAAA------------------------------ACAAATGTAAGTGAT.................................................................................................................................................................................................................................................................................................................................................................2811.001000001
droAna3
ACCACCAACTTCATCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTACTTCTAAGTCT------GTGTACCGT--ACAG------------------------------------------------TA------ATCTAACCCTATATAAA---CCCCCCACCGTAACACCGGTCACCATTGTCATTAG---TTGCT---------------------------------------CCAC------T-AACTGCACACA---------------------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTA-GCCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ACCACCAACTTCATCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTACTTCTAAGTCT------GTGTACCGT--ACAG------------------------------------------------TA------ATCTAACCCTATAA-GA--ACCCCCTAACGTCACACCGCTCACCATTATCATTAG---TTGCT---------------------------------------CCAC------T-AACTGCACACA---------------------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTA-GCCCSizeHit CountTotal NormTotal
No Reads
droKik1
ACCACCAACTTCATCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTTCTTCTATGTCTATGTCTGTGTGCCGTGTACAG------------------------------------------------TA------ATCTAACCCTAGATTGA--GCCC-CCA------CCCCGC---CCATTGTCATTAG---TTGCT---------------------------------------TCAC------T-AACTGCACA-----------------------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTA-GCCCSizeHit CountTotal NormTotal
No Reads
droFic1
ACCACCAACTTCTTCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTTCTTCTAAGTCT------GT-------GTACAG------------------------------------------------TA------GTCTAACCCTAGAGTGA--ATCC-C-T------------TCACCATTATCATTAG---TTGCT---------------------------------------CCAC------T-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTGCCGCA---CCCAAA---------------C--CTTTA-GCCCSizeHit CountTotal NormTotal
No Reads
droEle1
AGCAACAACAGAAGCAAC----AACATCAAC-AACAAAAGCCACAGCAGAAATCC-TTGTATAC------AA----ATT----------------------------------AGA--------AAA-----------------------------------------------------------------------GCAAATTGACGGG--AAGGGGGAAAGCAGTTGGT------------------------TCGGCGATAGCAAGTGGGTTGAG---TTGGG---------------------------------------CTGG------T-GACGGCACATAAATATTTATTAAAGACGAACCAACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCACACACTCAGCGATATCCTTGCAATCCTGCAGCCTGCATTAATA--TCCTGT-GTGTTTTSizeHit CountTotal NormTotal
No Reads
droRho1
AACAACAACAA------CCAC-AACAGCAGC-AGCAACAACATTTGCTA-GT------GTGTAA--CAAT---CAAATA---AATAACA-AC-----AATAATAGCAGCAATAGTT--------GTCACAACAGTTAT---CAAT-----------------------ATAGTTACAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAA-TAATSizeHit CountTotal NormTotal
No Reads
droBia1
ACCACCAACTTCATCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTTCTTCTAAGTCT------GT-------GTAGCG------------------------------------------------TA------GTCTAACCCTAGATTGAGAGCCC--CA------------CCACCACTGTCATTAG---TTGAT---------------------------------------CCACATCCGCTGAATTGCACACA-----------------------CACACACACAC--------------------------------------ACAGTTATACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTA-CCCCSizeHit CountTotal NormTotal
No Reads
droTak1
AACATC---TTCAG---CCAAGAACAGCAGCCACTA-ACAAATTGTTTGAGAAACTATATGAGTAACTAAAAAAA---AA-A-------GGAAAAATTAAA--------------------------------ATACATG-AAATAT------GT---------AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------------------------ATGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AGCASizeHit CountTotal NormTotal
No Reads
droEug1
ACCACCAACTTCATCATCCAA-ATCAGCACC-ACCAAAATCATCTCTTTAGAGAC-GTATGTATTATTCTGGGTG---AACC-------AAATGAACCAAG--------------------------------TTTCTTCTAAGTCT------GT-------GTAGCG------------------------------------------------TA------ATCTAACCCGA------------------------------ACCATTATCATTAGTAGTTGCT---------------------------------------CGAC------TTAACTGCACACA-----------------------CCCTTACACAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------CC---------------T--TTTAA-GCCCSizeHit CountTotal NormTotal
No Reads
dm3
C--AACCACATCAT---CAGC-AACAACAAT-AAT--AATAATAACAATAACAAC-ACAAGTAA--------------------------------------------------TA--------ATAACAACAACAAC---CACC-----------------------ACAGTGATAATAGTATTAGTGAGAATAATTATGAATTTAAGAG--TAGAGATAAAGCAA------------------------------------------GTCTAAGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................AATAATTATGAATTTAAGAG--TAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AC---CACC-----------------------ACAGTGATAATAGTATTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................A--------ATAACAACAACAAC---CACC-----------------------ACAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................ATTATGAATTTAAGAG--TAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................ATTTAAGAG--TAGAGATAAAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................AGTATTAGTGAGAATAATTATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TAATTATGAATTTAAGAG--TAGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................TAATAGTATTAGTGAGAATAATTATGAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TAGTATTAGTGAGAATAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................ACAACAAC---CACC-----------------------ACAGTGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................ACAGTGATAATAGTATTAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GATAATAGTATTAGTGAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................AATTATGAATTTAAGAG--TAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................GAATTTAAGAG--TAGAGATAAAGCAA------------------------------------------G...........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AGTGATAATAGTATTAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................GAG--TAGAGATAAAGCAA------------------------------------------GTC.........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................G--TAGAGATAAAGCAA------------------------------------------GTC.........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................AATAATTATGAATTTAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CAGTGATAATAGTATTAGTGAGAATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TAGTGAGAATAATTATGAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TAAGAG--TAGAGATAAAGCAA------------------------------------------GTCTAAG.....................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................AATAATTATGAATTTAAGAG--TAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TAA--------------------------------------------------TA--------ATAACAACAACAAC---CACC-----------------------ACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TAATTATGAATTTAAGAG--TAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TAATTATGAATTTAAGAG--TAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TTAAGAG--TAGAGATAAAGCAA------------------------------------------GTCTA.......................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...AACCACATCAT---CAGC-AACAACAAT-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CAGTGATAATAGTATTAGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CAGTGATAATAGTATTAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TGATAATAGTATTAGTGAGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................G--TAGAGATAAAGCAA------------------------------------------GTCTA.......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CAGTGATAATAGTATTAGTGAGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................AAGAG--TAGAGATAAAGCAA------------------------------------------G...........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................TATGAATTTAAGAG--TAGAGATAAAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GTATTAGTGAGAATAATTATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TA--------ATAACAACAACAAC---CACC-----------------------ACAGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................ACC-----------------------ACAGTGATAATAGTATTAGTGAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................A--------ATAACAACAACAAC---CACC-----------------------AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AACAAT-AAT--AATAATAACAATAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................A--------ATAACAACAACAAC---CAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AACAAT-AAT--AATAATAACAATAACAAC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AATAATAACAATAACAAC-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.0810000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
C--AACCACATCAT---CAGC-AACAACAAT-AATAA--TAATAACAATAACAAC-ACAAATA--------------------------------------------------ATA--------ATAACAACAACAAC---CACC-----------------------ACAGTGATAATAGTATTAGTGAGAATAGTTATGAATTTAAGAG--TAGAGATAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................AGC-AACAACAAT-AATAA--TAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
............................................................................................................................................................................TGATAATAGTATTAGTGAGAATAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
...............................................................................................................................................................................TAATAGTATTAGTGAGAATAGTTATGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
.................................................................................................................................................................................................TAGTTATGAATTTAAGAG--TAGAGATAA...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
droSec2
ACCACCTGCACCACCATC-GC-GGCAGTACG-GCCGTAG-------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGACAAGATCACCAACCTGAATA--CGGTAA--------------------------------------------------GTCAAGGGG-------A-TCCTTAAAATCAA------------------ACAAAACA---------------------------------------------------------CCAAAAAATCATGGATTTTAAATTTCATCGAAGATTAACTAAAAGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
ATTAGCAACATCTG---CAAC-ATCAGCAAC-AATCC-TAAGCTATGTA-GT------GTACTC--TAAT---GCAACC---AATATGG-CA-----AATGGCATATT-----GCAAAATCAAAGCAACGAAATTTAC---GAAT-----------------------TTATATA-------------------------------------------------------------------------------------------------------------------------------------------------------CAAC------TAACCAACACACA------------------------------------CAC-------------------------------CCACACACACACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAA-ATAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AAAAACGAAAAGAAAAGCCAA-CACA--------------------------------------------------------------------------------------A----------------------------------------------------------GTTGACATAGAAATTGTACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGAAAATGATTT-------GTGTGC--------C---CCCTGT----GCCACACAGACACA----------------------------------CACAC--G-------------------------CACACG--------CACACA-----------------------------------------------------CACAC-ACACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/16/2015 at 09:32 PM