ID:

dvi_15698

 Coordinate:

scaffold_13047:6335577-6335853 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ23948-cds]; exon [dvir_GLEANR_9266:1]; CDS [Dvir\GJ23948-cds]; exon [dvir_GLEANR_9266:2]; intron [Dvir\GJ23948-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATGGAGGAGGATCTGCTGGCAAAACGAATGATATCACACACTACTACAGGGTAAGGCATTAATTCAATTAGTATTTGTTGATCATTTGCAAAGTTATCGATTAACACATATTGATAAGGAACGAGCATAGATAAATAGCTGAAGAACTTTCATAATGTGATGCAGCTATGCGATATATCGATATATGTTATCGACACACCAGTCGTATACATATGCATATGTAGTATACTCAACATGCGTGCAGAAAGATGCCGATTTCAACACACCTACACATACTCACCACGCACCATCTCTCTCTCTCTCTCTGTTCATCTCTGTCTGGTACAGGTCAAGCGCCGGCCGAACGCAGCCACCCACGAGATCCACCCGAAGAAACA
**************************************************((((((((........((((((((.((((((((....((...))....)))))))).))))))))..(((..(((((.(((......((((....((.........))....))))(((((.((((((...(((((((...((((......))))...))))))).)))))).))))).......((((((..((...(((....................)))..))..))))))...............))).))))).))).)))))..)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M061
embryo
 V053
head
 M047
female body
 V047
embryo
 SRR060657
140_testes_total
 SRR060665
9_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060658
140_ovaries_total
 V116
male body		 SRR060662
9x160_0-2h_embryos_total
ATGGAGGAGGATCTGCTGGC..................................................................................................................................................................................................................................................................................................................................................................... 20 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................ATATGGTCTCGACACAGCAGT.............................................................................................................................................................................. 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................CAAGTCTGTCTGGTACAGGTG............................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................................AGATCCACCCGAAGAAACA 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CAAGCGCCGGCCGAACGCAGCC.......................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................AAAGACGCCGGTTTCAACA.................................................................................................................. 19 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0
........GGATCTGCTGGCAAAACGAATG........................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................CACCCACGAGATCCACCCGA....... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................CCCACGAGATCCACCCGAAGAAACA 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................GATATCACACACTACTACAGG....................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................ATATGGTCTCGTCACACCA................................................................................................................................................................................ 19 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................TGTGTGGGACAGGTCATGC........................................... 19 3 20 0.10 2 0 0 0 0 0 0 0 2 0 0
..............................................................................................................................................AGAACTTTCAGAAGATGATG....................................................................................................................................................................................................................... 20 3 17 0.06 1 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................GAGAAATAGCTGAAGAAGGT.................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
....................AAAACGACTCATATCACCC.................................................................................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TACCTCCTCCTAGACGACCGTTTTGCTTACTATAGTGTGTGATGATGTCCCATTCCGTAATTAAGTTAATCATAAACAACTAGTAAACGTTTCAATAGCTAATTGTGTATAACTATTCCTTGCTCGTATCTATTTATCGACTTCTTGAAAGTATTACACTACGTCGATACGCTATATAGCTATATACAATAGCTGTGTGGTCAGCATATGTATACGTATACATCATATGAGTTGTACGCACGTCTTTCTACGGCTAAAGTTGTGTGGATGTGTATGAGTGGTGCGTGGTAGAGAGAGAGAGAGAGACAAGTAGAGACAGACCATGTCCAGTTCGCGGCCGGCTTGCGTCGGTGGGTGCTCTAGGTGGGCTTCTTTGT
**************************************************((((((((........((((((((.((((((((....((...))....)))))))).))))))))..(((..(((((.(((......((((....((.........))....))))(((((.((((((...(((((((...((((......))))...))))))).)))))).))))).......((((((..((...(((....................)))..))..))))))...............))).))))).))).)))))..)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 V053
head
 M047
female body
 V047
embryo
 SRR060662
9x160_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR1106714
embryo_2-4h
 SRR060681
Argx9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060660
Argentina_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
..................................................................................................................................................................................................................................................TCTTTCGAGGGATAAAGTTGT.................................................................................................................. 21 3 3 3.33 10 7 0 1 0 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................CTTTCGAGGGATAAAGTTGT.................................................................................................................. 20 3 13 1.15 15 7 0 7 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................................................................GAGTGGTGAGTGTTAGAGAGA................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................TGGCTATAGTGTGTGAGGAT........................................................................................................................................................................................................................................................................................................................................... 20 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................TGATGGTTTCCTATTCCGTA.............................................................................................................................................................................................................................................................................................................................. 20 3 8 0.38 3 0 0 1 0 0 0 0 0 1 1 0 0 0
..............................................................................................................................................................................................................................................................................TGTAGGAGTGGTGCGTGTAAG...................................................................................... 21 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................TGTCTAACTATTGCTTGCT............................................................................................................................................................................................................................................................. 19 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................GAGAGAGAGAGAGAGACAAGT.................................................................. 21 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................TTTTGCGGCCGGCTTGCG.............................. 18 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................TCTTTCGAGGGATAAAGTTG................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GGTATACATCATATTAGT................................................................................................................................................. 18 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................CTTTCGAGGGATAAAGTTG................................................................................................................... 19 3 20 0.15 3 0 1 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATACATCATTTGAGT................................................................................................................................................. 15 1 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................TGCGTATACATCAGGTGAGT................................................................................................................................................. 20 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................AGAGAGAGAGAGAGAGACAA.................................................................... 20 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 2 0 0
.................CCGTTTTACTTCCTACAGTGT................................................................................................................................................................................................................................................................................................................................................... 21 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGTATACATCAGATCAGT................................................................................................................................................. 20 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................GCGTCGTAGAGAGAGGGAGGGA......................................................................... 22 3 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGTATACATCATATTCGT................................................................................................................................................. 18 2 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................AGAGATAACTAGAGAAAGACC....................................................... 21 3 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCGTATACATCTTGTGAGT................................................................................................................................................. 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................TGAGTGGTGCCTTGCAGA..................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:6335527-6335903 + dvi_15698 ATGGAGGAGGA-------------------TCT-------------------------------------------GCTGGCAAAACGAATGATATCACACACTACTACAGGGTAAGGC----ATTAATTCA-------------ATTAGTATTTG-----------------------------------------------------------------TTGATC----ATTTGCAAAGTTATCGATTAACACAT---------------------------------------------------ATT---------GATAAGGAACGAGCATAGATAAATAGCTGAAGAACTTTCATAATGTGATGCAGCTAT-GCG---ATATATCGATATATGTTATCGAC--------ACACCAG-----TCGT----ATACATATGCATATGTAGTATACTCAACATGCGTGCAGAAAGATGCCGATTTCAACACACCTACACATACTCACCACGC--------------------ACCATCTCTCTCTCTC-----TCTCTG--TTCAT------CTCTGT--CTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACAGGTCAAGCGCCGGCCGAACGC------------------------AGCCACCCACGAGATCCACCCGAAGAAACA
droMoj3 scaffold_6359:3222042-3222410 + AGCAACAACAGCA-------------------------------------------------------------------------GCAGCCA-----CAATACGCTGCA-------ACAGATATCGATTAC-------------ATCGGCGC-CG-----------------------------------------------------------------CTGTCG----GCGCGCAAGGTCATCAATGTGCGGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCC--GAGCATG-----GGTCTGG--T----CAGTTCGCTGGAGGCGCAGC---TGGCAC---GG---------------CCCGTTATACCGCCCGTGCCGGCAGCTGTGAGCAGCAGCAGTAGTAATACGAGCGGCAGCGGCAGCTGCAATACAATCACCACAACAACGGCCACAATG-GTGGCA---ATTAGTCAGGCGGCGTCGGCCACTCCTATGCCTACGCCCACTGCCACACCCACACCCACGGCCACGTCAGCT-------------------------GTC---------------------GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCCTGCACCTGCAGCAGCA
droGri2 scaffold_14906:11656037-11656364 + ATGGAGGC--------------------------------------------------------------------GCTGGCAAGGCGAATGATATCACACACTACTACAAGGTAAGCA----AAATATC------------------------GATGATCGATTAAATTAATCGATCAATAAAACATTTGAGAAGCAGATAAAAATATATATTTTAATTACTGCGT--TTATCGATAAGTTTTTCAATTTGAAAACGCTTAACATAAATGAAAGCGATACTTGCAAATACGAGCTAATTACACAAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACACTCACCA------CACACACGAAACTCACCACACTCTATCT--CTCTTGC-----TCTCTGT--TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGCGCACAGGTCAAGCGAAGGCCGCACGC------------------------AGCCACCCACGAGATCCACCCCAAGAAACA
droWil2 scf2_1100000004902:8475857-8475939 + CCGTTACTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCTATA-AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGATTAGGTCAAACGTCGACCACATGC------------------------CAATAGCTTTGAGATACATCCGAAGAAACA
dp5 XR_group6:3094549-3094685 + TTCGCCACTCTTCCCC--------------------------------------AAATCGA-------------CGATGCCTAACCCCAGCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT--TTCTGTT-----CTTCTGT--T---------TCGTTT--C---------TGATAC---AG---------------GGGGATCGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTT-----CTGCTGCCCGATGCCCAACTGCCGGCGACGCTT------------------------CGCCACC---------------GAGAACGA
droPer2 scaffold_7:1971103-1971229 + ACACACACACACACAC--------------------------------------ACAACA--------------TCCCGCCTCAC---------CTCACCGGCTCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT---------G------TTTACTTTCTTTTCTGT--ATACTGTATATAATGCTCTGTACAAAATCAAATCAACCAAATCAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTCCGCCCGCCC
droAna3 scaffold_13337:6354023-6354115 - CTTTGTCCTCGTC---TCTTTCCAGGAG--------GAGGTGAAGCCGCCGCCAAAGCCTGCGAAGACACCACGCAAGCGGCA-------------------------------------------GCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGC------------------------TC-----------------------ATACC
droBip1 scf7180000396708:3141733-3141823 - CCCGCAAGG-----------------------------------------------------------------TGGCCAACAAGTCCAATGATATCACAAATTACTACAAGGTGGGTT----T-------ATCTA---------ATAA----ATG--------------------------------------------------------------------TGATT--AGTTAT--AGT-------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT--------------------------------------------------------------------------------------------A--------------------------------------------------------------------------ATTAA
droKik1 scf7180000302706:724146-724198 + C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTCAAGCGCCGGCCACACGC------------------------CGTCACCGACGAGATCCACCCCAAGAAGCA
droFic1 scf7180000454096:752835-753207 - AGGTG-----------------------------------------------------------------------GCCGGAAAGTCCAACGATATCACAAATTACTACAAGGTGAGTT----GTGGTTTCAGAAAAGAAGGGGATGTAGGGTTTA------------------------------------------------------------------GGGTC----ATTGGGG-AGTTGT-----------------TCATGAGTGAAAGTCATGAGCAAAAACAATATGTTGCTGTTCAAACACGCTGCCAGGACTTAAACAACAAGCTTAAA-----------------TTCAAACTGGGTTACAGTATTCGCAAGAAAATGTTGTTAAATGTTGTCCTTTATATAAAAGACCAGCAATGTAGTTTAGATAC-TATGTTTATGTACTATATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTAAT---A---------------------------------------------------GAACTTTGTTAACTGTTTTA--------TTATTCTCCTCGCAGGTCAAACGCCGGCCCCATGC------------------------TGTCACCGACGAGATCCACCCGAAGAAACA
droEle1 scf7180000490564:1413601-1413695 + CCCCGTTCTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT--CTCTCTC-----TTTCTGT--T----TTCTTTTCTGAAAATGCAGCACATGGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGCGGGCGTGGCGC------------------------CTTTCCC-GGGCGCTCCGGCCG--------
droRho1 scf7180000779528:292878-293006 - ACGCACACACACGTAC-----------------------------------------------------------------------GCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACGC--------------------ACACACTCACACACATGCTCC-G------CCGAATTTCGGTTGATT--A---------TAAAAC---G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---------------------GAGCAAAAGTTAGAGCAGCGCCAGCAAAACAGCAGAGCAGCAATGACAGCGGCA
droBia1 scf7180000302402:5916492-5916565 - ACGA-------------------------------------------------------------------------CCGGCAAGTCCAACGATATCACAAACTACTACAAGGTGAGTG----GCAATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGGATT-----------------------------------------------------------------------------------------------------------------G--------------------------------------------------------TCTTTGA-------------------------------------------------------------------------------------------TCCTTT
droTak1 scf7180000415711:234926-234997 + TTTTTTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCCCCGCAGGTCAAACGCCGGCCACACGC------------------------CGTCACCGACGAGATCCACCCGAAGAAGCA
droEug1 scf7180000409760:938263-938315 + C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTCAAACGCCGGCCACAAAC------------------------CGTCAGCGACGAGATCCACCCTAAGAAACA
dm3 chr3R:17451566-17451838 - ACGCAGCAGCA-------------------ACTGCAGCAGCAGCACCACCACCAAAATCAGCAGCAACGCAAGGCGACCGGCAAATCCAACGATATCACAAATTATTACAAGGTCAGTT----GGAGTTTTATGTG---------AT------ATA--------------------------------------------------------------------TAGCT--AAT---------------------------------------------------------------------AATACATC---------AATAACAGAAAATTATTGATATAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAAAGAAAGGAATTCGTTTCAGTAAAT---A---------------------------------------------------ACA---------CTCTTTAATCCTTTTATCCTC--CATTTCAGGTCAAACGTCGGCCACACGC------------------------CGTCAGCGATGAGATTCACCCGAAGAAGCA
droSim2 3l:22082826-22082937 - ACATCCATCAGGC-------------------------------------------------------------------------CCCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACCTTTAC-----TCTTTT--CTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGCCAAGTCCCGGCATTTCACGGTCAACGGTCTTCTGAG------TGCCAATAACACGCTCCAGCAGCAGCAGCA
droSec2 scaffold_6:4040399-4040685 + dse_1492 GGCAACGACGGGC---CACACGCAGCAGCAACTGC---AGCAGCACCACCACCAAAATCAGCAGCAACGCAAGGCGACCGGCAAATCAAACGATATCACAAATTATTACAAGGTCAGTT----GGAGTTTTATGTG---------AT------ATG--------------------------------------------------------------------TTGCT--AATAAT--AAT-------------------------------------------------------------AATACATC---------AATAACAGAAGATTATTGATATAAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAAGAGAGGAATGCGTTTCAGTAAAT---A---------------------------------------------------ACA---------CTGTTTCA--------TCCTCGGACTTTCAGGTCAAACGTCGGCCCCACGC------------------------CGTCAGCGACGAGATCCACCCGAAGAAACA
droYak3 3R:6289084-6289225 - ACGCAAGGC------------------------------------------------------------------GATCGGCAAATCTAACGATATCACAAATTATTACAAGGTCAGTT----GGTGTTCTATGAG---------AT------CTG--------------------------------------------------------------------TTGCT--ATT---------------------------------------------------------------------AAAACATC---------AATAACGGAAGATAATTGATAAAGAAAATATAAATCACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTATGAAATT
droEre2 scaffold_4929:9849709-9849821 + TTTACACAAA-CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACATAGTA------CACACAC--------------ACAAAC------ACACACTTT-T------GATGACCTGAACTAGTT--C---------TAATCA---AAGCCAAACGAAACCAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----AAAACCGCTTAACCAAAACAGGCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATGGAGGAGGA-------------------TCT-------------------------------------------GCTGGCAAAACGAATGATATCACACACTACTACAGGGTAAGGC----ATTAATTCA-------------ATTAGTATTTG-----------------------------------------------------------------TTGATC----ATTTGCAAAGTTATCGATTAACACAT---------------------------------------------------ATT---------GATAAGGAACGAGCATAGATAAATAGCTGAAGAACTTTCATAATGTGATGCAGCTAT-GCG---ATATATCGATATATGTTATCGAC--------ACACCAG-----TCGT----ATACATATGCATATGTAGTATACTCAACATGCGTGCAGAAAGATGCCGATTTCAACACACCTACACATACTCACCACGC--------------------ACCATCTCTCTCTCTC-----TCTCTG--TTCAT------CTCTGT--CTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACAGGTCAAGCGCCGGCCGAACGC------------------------AGCCACCCACGAGATCCACCCGAAGAAACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
ATGGAGGAGGA-------------------TCT-------------------------------------------GCTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000100000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCCACCCGAAGAAACA1911.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCGCCGGCCGAACGC------------------------AGCC..........................2211.001000100000000000000000000000000000000000000000000000000000000000
........GGA-------------------TCT-------------------------------------------GCTGGCAAAACGAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCACGAGATCCACCCGA.......2011.001000000010000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACGAGATCCACCCGAAGAAACA2511.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................GATATCACACACTACTACAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGCAACAACAGCA-------------------------------------------------------------------------GCAGCCA-----CAATACGCTGCA-------ACAGATATCGATTAC-------------ATCGGCGC-CG-----------------------------------------------------------------CTGTCG----GCGCGCAAGGTCATCAATGTGCGGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCC--GAGCATG-----GGTCTGG--T----CAGTTCGCTGGAGGCGCAGC---TGGCAC---GG---------------CCCGTTATACCGCCCGTGCCGGCAGCTGTGAGCAGCAGCAGTAGTAATACGAGCGGCAGCGGCAGCTGCAATACAATCACCACAACAACGGCCACAATG-GTGGCA---ATTAGTCAGGCGGCGTCGGCCACTCCTATGCCTACGCCCACTGCCACACCCACACCCACGGCCACGTCAGCT-------------------------GTC---------------------GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCCTGCACCTGCAGCAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGGAGCCT...............2211.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---ATTAGTCAGGCGGCGTCGG............................................................................................................................................................2211.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAGCAGCA......................23200.102000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAGCAGCAGCAG.....................28200.051100000
droGri2
ATGGAGGC--------------------------------------------------------------------GCTGGCAAGGCGAATGATATCACACACTACTACAAGGTAAGCA----AAATATC------------------------GATGATCGATTAAATTAATCGATCAATAAAACATTTGAGAAGCAGATAAAAATATATATTTTAATTACTGCGT--TTATCGATAAGTTTTTCAATTTGAAAACGCTTAACATAAATGAAAGCGATACTTGCAAATACGAGCTAATTACACAAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACACTCACCA------CACACACGAAACTCACCACACTCTATCT--CTCTTGC-----TCTCTGT--TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGCGCACAGGTCAAGCGAAGGCCGCACGC------------------------AGCCACCCACGAGATCCACCCCAAGAAACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------------AGCCACCCACGAGATCC.............1911.00110
droWil2
CCGTTACTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCTATA-AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGATTAGGTCAAACGTCGACCACATGC------------------------CAATAGCTTTGAGATACATCCGAAGAAACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTCGACCACATGC------------------------CAATAGCT......................2511.00100010
dp5
TTCGCCACTCTTCCCC--------------------------------------AAATCGA-------------CGATGCCTAACCCCAGCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT--TTCTGTT-----CTTCTGT--T---------TCGTTT--C---------TGATAC---AG---------------GGGGATCGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTT-----CTGCTGCCCGATGCCCAACTGCCGGCGACGCTT------------------------CGCCACC---------------GAGAACGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTT-----CTGCTGCCC..............................................................................2011.0010100000000
droPer2
ACACACACACACACAC--------------------------------------ACAACA--------------TCCCGCCTCAC---------CTCACCGGCTCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT---------G------TTTACTTTCTTTTCTGT--ATACTGTATATAATGCTCTGTACAAAATCAAATCAACCAAATCAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTCCGCCCGCCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CTTTGTCCTCGTC---TCTTTCCAGGAG--------GAGGTGAAGCCGCCGCCAAAGCCTGCGAAGACACCACGCAAGCGGCA-------------------------------------------GCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGC------------------------TC-----------------------ATACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................CGCCAAAGCCTGCGAAGACACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
droBip1
CCCGCAAGG-----------------------------------------------------------------TGGCCAACAAGTCCAATGATATCACAAATTACTACAAGGTGGGTT----T-------ATCTA---------ATAA----ATG--------------------------------------------------------------------TGATT--AGTTAT--AGT-------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT--------------------------------------------------------------------------------------------A--------------------------------------------------------------------------ATTAASizeHit CountTotal NormTotal
No Reads
droKik1
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTCAAGCGCCGGCCACACGC------------------------CGTCACCGACGAGATCCACCCCAAGAAGCASizeHit CountTotal NormTotal
No Reads
droFic1
AGGTG-----------------------------------------------------------------------GCCGGAAAGTCCAACGATATCACAAATTACTACAAGGTGAGTT----GTGGTTTCAGAAAAGAAGGGGATGTAGGGTTTA------------------------------------------------------------------GGGTC----ATTGGGG-AGTTGT-----------------TCATGAGTGAAAGTCATGAGCAAAAACAATATGTTGCTGTTCAAACACGCTGCCAGGACTTAAACAACAAGCTTAAA-----------------TTCAAACTGGGTTACAGTATTCGCAAGAAAATGTTGTTAAATGTTGTCCTTTATATAAAAGACCAGCAATGTAGTTTAGATAC-TATGTTTATGTACTATATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTAAT---A---------------------------------------------------GAACTTTGTTAACTGTTTTA--------TTATTCTCCTCGCAGGTCAAACGCCGGCCCCATGC------------------------TGTCACCGACGAGATCCACCCGAAGAAACASizeHit CountTotal NormTotal
No Reads
droEle1
CCCCGTTCTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT--CTCTCTC-----TTTCTGT--T----TTCTTTTCTGAAAATGCAGCACATGGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGCGGGCGTGGCGC------------------------CTTTCCC-GGGCGCTCCGGCCG--------SizeHit CountTotal NormTotal
No Reads
droRho1
ACGCACACACACGTAC-----------------------------------------------------------------------GCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACGC--------------------ACACACTCACACACATGCTCC-G------CCGAATTTCGGTTGATT--A---------TAAAAC---G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA---------------------GAGCAAAAGTTAGAGCAGCGCCAGCAAAACAGCAGAGCAGCAATGACAGCGGCASizeHit CountTotal NormTotal
No Reads
droBia1
ACGA-------------------------------------------------------------------------CCGGCAAGTCCAACGATATCACAAACTACTACAAGGTGAGTG----GCAATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGGATT-----------------------------------------------------------------------------------------------------------------G--------------------------------------------------------TCTTTGA-------------------------------------------------------------------------------------------TCCTTTSizeHit CountTotal NormTotal
No Reads
droTak1
TTTTTTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCCCCGCAGGTCAAACGCCGGCCACACGC------------------------CGTCACCGACGAGATCCACCCGAAGAAGCASizeHit CountTotal NormTotal
No Reads
droEug1
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTCAAACGCCGGCCACAAAC------------------------CGTCAGCGACGAGATCCACCCTAAGAAACASizeHit CountTotal NormTotal
No Reads
dm3
ACGCAGCAGCA-------------------ACTGCAGCAGCAGCACCACCACCAAAATCAGCAGCAACGCAAGGCGACCGGCAAATCCAACGATATCACAAATTATTACAAGGTCAGTT----GGAGTTTTATGTG---------AT------ATA--------------------------------------------------------------------TAGCT--AAT---------------------------------------------------------------------AATACATC---------AATAACAGAAAATTATTGATATAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAAAGAAAGGAATTCGTTTCAGTAAAT---A---------------------------------------------------ACA---------CTCTTTAATCCTTTTATCCTC--CATTTCAGGTCAAACGTCGGCCACACGC------------------------CGTCAGCGATGAGATTCACCCGAAGAAGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................GACCGGCAAATCCAACGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1919.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTCACCCGAAGAA...1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AGCAGCAACGCAAGGCGACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..........................................................CAGCAGCAACGCAAGGCGACCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GCAACGCAAGGCGACCGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AATCAGCAGCAACGCAAGGCGACCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................AGCAGCAACGCAAGGCGACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AAGGCGACCGGCAAATCCAACGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGC------------------------CGTCAGCGATGAGAT...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC------------------------CGTCAGCGATGAGATTCAC...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................GCAAATCCAACGATATCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................AGCAACGCAAGGCGACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATCCTTTTATCCTC--CATTTCA...........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GCAGCACCACCACCAAAATCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TT----GGAGTTTTATGTG---------AT------ATA--------------------------------------------------------------------TAGCT--A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................TCAGCAGCAACGCAAGGCGACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AGCAGCAACGCAAGGCGACCGGCAAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TCCAACGATATCACAAATTATTACAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGTCGGCCACACGC------------------------..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAGAAAGGAATTCGTTTC...................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGC------------------------CGTCAGCGATGAGATTCA............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCGGCCACACGC------------------------CGTCAGCGATGAG.................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................ACCAAAATCAGCAGCAACGCAAGGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGATTCACCCGAAGAAGC.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAACGTCGGCCACACGC------------------------..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................CAAGGCGACCGGCAAATCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAATTCGTTTCAGTAA..............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................GCAAATCCAACGATATCACAAATTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTCGGCCACACGC------------------------CGT...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGTCGGCCACACGC------------------------C.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATCAGCAGCAACGCAAGGCGACCGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------------CGTCAGCGATGAGATTCACCCGAA......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................ACGATATCACAAATTATTACAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GCACCACCACCAAAATCAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................AACGATATCACAAATTATTACAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--CATTTCAGGTCAAACGTCGGCC............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GCAGCAACGCAAGGCGACCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTCGGCCACACGC------------------------CGTC..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................CAAAATCAGCAGCAACGCAAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CACCACCAAAATCAGCAGCAACGCAAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGATGAGATTCACCC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................CAAGGCGACCGGCAAATCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CGCAAGGCGACCGGCAAATCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................ACCAAAATCAGCAGCAACGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACACGC------------------------CGTCAGCGATGAGATTCACC..........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC------------------------CGTCAGCGATGAGATTCACCCGA.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AAAATCAGCAGCAACGCAAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................AAATCAGCAGCAACGCAAGGCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................TCAGCAGCAACGCAAGGCGACCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....AGCAGCA-------------------ACTGCAGCAGCAGCACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATGAGATTCACCCGAAGAAGC.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AAGGCGACCGGCAAATCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................CAAATCCAACGATATCACAAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AGGCGACCGGCAAATCCAACGATATCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CCGGCAAATCCAACGATATCACAAATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CAGCAGCACCACCACCAAAATCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................CAACGCAAGGCGACCGGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................ATCCAACGATATCACAAATTATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AGCAACGCAAGGCGACCGGCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................AAATCCAACGATATCACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................ACCAAAATCAGCAGCAACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................ACCACCACCAAAATCAGCAGCAACGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGAGATTCACCCGAAGA....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAGAAAGGAATTCGT......................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC------------------------CGTCAGCGATGAGATTCACCCGAA......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AAGGCGACCGGCAAATCCAACGATATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACTGCAGCAGCAGCACCACCACCAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------CTCTTTAATCCTTTTATCCT.....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAAT---A---------------------------------------------------ACA---------CTCTTTA..................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGC------------------------CGTCAGCGATGAGATTCACCCGAA......2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGAGATTCACCCGAAGAAGCA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................AAATCAGCAGCAACGCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAACGTCGGCCACACGC------------------------CGTCAGCG......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AACGATATCACAAATTATTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................AAATCAGCAGCAACGCAAGGCGACCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCGGCCACACGC------------------------CGTCA.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ACCACCAAAATCAGCAGCAACGCAAGGCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................GCAAATCCAACGATATCACAAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................ATATCACAAATTATTACAAGGTCAAAC----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GCAGCAACGCAAGGCGACCGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....GCAGCA-------------------ACTGCAGCAGCAGCACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AGCA-------------------ACTGCAGCAGCAGCACCACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCAGCAGCA-------------------ACTGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...CAGCAGCA-------------------ACTGCAGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...CAGCAGCA-------------------ACTGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....AGCAGCA-------------------ACTGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAAAGAAAGGAAA..........................................................................................................................................................................................18190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCAGCA-------------------ACTGCAGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....GCAGCA-------------------ACTGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GCAGCAGCAGCACCACCACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
ACATCCATCAGGC-------------------------------------------------------------------------CCCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACCTTTAC-----TCTTTT--CTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGCCAAGTCCCGGCATTTCACGGTCAACGGTCTTCTGAG------TGCCAATAACACGCTCCAGCAGCAGCAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGTCTTCTGAG------TGCC..........................1911.00100100000000000000
droSec2
GGCAACGACGGGC---CACACGCAGCAGCAACTGC---AGCAGCACCACCACCAAAATCAGCAGCAACGCAAGGCGACCGGCAAATCAAACGATATCACAAATTATTACAAGGTCAGTT----GGAGTTTTATGTG---------AT------ATG--------------------------------------------------------------------TTGCT--AATAAT--AAT-------------------------------------------------------------AATACATC---------AATAACAGAAGATTATTGATATAAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAAGAGAGGAATGCGTTTCAGTAAAT---A---------------------------------------------------ACA---------CTGTTTCA--------TCCTCGGACTTTCAGGTCAAACGTCGGCCCCACGC------------------------CGTCAGCGACGAGATCCACCCGAAGAAACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................AACAGAAGATTATTGATAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA--------TCCTCGGACTTTCAGT.........................................................................1911.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATCCACCCGAAGAAAC.2011.0010010
................................................CCACCAAAATCAGCAGCAACGCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
............................................................GCAGCAACGCAAGGCGACCGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...........................GCAACTGC---AGCAGCACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.2011000
droYak3
ACGCAAGGC------------------------------------------------------------------GATCGGCAAATCTAACGATATCACAAATTATTACAAGGTCAGTT----GGTGTTCTATGAG---------AT------CTG--------------------------------------------------------------------TTGCT--ATT---------------------------------------------------------------------AAAACATC---------AATAACGGAAGATAATTGATAAAGAAAATATAAATCACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTATGAAATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................GTTCTATGAG---------AT------CTG--------------------------------------------------------------------TTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEre2
TTTACACAAA-CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACATAGTA------CACACAC--------------ACAAAC------ACACACTTT-T------GATGACCTGAACTAGTT--C---------TAATCA---AAGCCAAACGAAACCAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----AAAACCGCTTAACCAAAACAGGCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTTT-T------GATGACCTGAACTAGTC--................................................................................................................................................................................................................................................................................................................................2511.0010100000

Generated: 05/16/2015 at 09:00 PM