ID:

dvi_15633

 Coordinate:

scaffold_13047:5297658-5297808 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.5 -18.4 -18.3

Flybase annnotation

exon [dvir_GLEANR_9217:10]; CDS [Dvir\GJ23894-cds]; intron [Dvir\GJ23894-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1N1_DVirRCHelitron+
Homo6DNAhAT-Pegasus+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTTGATGTTAGAAGAGAAGGGTTCAGGGTATTTCCTAGTCAGGAGCTCACGACTAGAACATCTTACTTGTTTGTATTTTGTGTTGTCACTAGCATACACATAGTTGCATAAATATATACATTGTAAATAATTGGAAATACATTATTTATTAACAAGTATTTATAATTCCTCTAACTTAATTATAATATAATTTTACCTAGTACTTTGAGCTGCGCTATGGTGGCAGCATTCGAAACTTCGGCTCTATGCC
**************************************************...((((((((.......))))((((...((((((((.....))).)))))....))))...........((((((((((.(((..((((.......))))..))).))))))))))...........((((((...))))))....))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 V116
male body		 M047
female body
 SRR060688
160_ovaries_total
 SRR060665
9_females_carcasses_total
 SRR060670
9_testes_total
 GSM1528803
follicle cells		 SRR060689
160x9_testes_total
 SRR1106730
embryo_16-30h
 SRR060656
9x160_ovaries_total
 SRR060676
9xArg_ovaries_total
.TTTGATGTTAGAAGAGAAGGGTTC.................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................CGACTAGAACATCTTACTTGTTTGTAT.............................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................TATTTCCTAGTCAGGAGCTCACGACT.................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................TTCAGGGTATTTCCTAGTCAGGAGCTC.......................................................................................................................................................................................................... 27 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................AAAACTTCGGATCTATGCC 19 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.......................TCAGGGGATTTCCTAGTCATGAGCT........................................................................................................................................................................................................... 25 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
...............................................TCACGACTAGAACATCTTACTTGTTC.................................................................................................................................................................................. 26 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.................AAGGGTTCAGGGTATTTCCTAGTC.................................................................................................................................................................................................................. 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
..........................GGGTATTTCCTAGAC.................................................................................................................................................................................................................. 15 1 20 0.10 2 0 0 0 0 0 0 0 0 2 0 0
.................AAGGGTTCACGGTATTTA........................................................................................................................................................................................................................ 18 2 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0
..........................GTGTATTTCCTAGTCA................................................................................................................................................................................................................. 16 1 15 0.07 1 0 0 0 0 0 0 1 0 0 0 0
............................GTATTTCCTAGACAG................................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
..................AGGGTTCAGGGTATTTCCTAGT................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
..TTGATGTTAGAAGAAAAGGGT.................................................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
..........................GTGTATTTCCTAGCCAG................................................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

TAAACTACAATCTTCTCTTCCCAAGTCCCATAAAGGATCAGTCCTCGAGTGCTGATCTTGTAGAATGAACAAACATAAAACACAACAGTGATCGTATGTGTATCAACGTATTTATATATGTAACATTTATTAACCTTTATGTAATAAATAATTGTTCATAAATATTAAGGAGATTGAATTAATATTATATTAAAATGGATCATGAAACTCGACGCGATACCACCGTCGTAAGCTTTGAAGCCGAGATACGG
**************************************************...((((((((.......))))((((...((((((((.....))).)))))....))))...........((((((((((.(((..((((.......))))..))).))))))))))...........((((((...))))))....))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 M047
female body
 SRR060684
140x9_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 SRR060677
Argx9_ovaries_total
 SRR1106728
larvae
 SRR060666
160_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060681
Argx9_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
.......................................................................................................................................................................................ATTATATTAAAGTGGCTC.................................................. 18 2 6 3.33 20 10 2 0 5 0 3 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATTATATTAAAGTGGCTCA................................................. 19 2 2 2.50 5 3 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TTATATTAAAGTGGCTCA................................................. 18 2 9 0.78 7 1 3 1 0 0 0 1 1 0 0 0 0 0
...................CCCAAGTCCCATAAAGGATCAGTC................................................................................................................................................................................................................ 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................CGAGTGCTGATCTTGTAGAA.......................................................................................................................................................................................... 20 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TAATAGATAATTGTTTATA........................................................................................... 19 2 20 0.15 3 1 0 0 0 0 0 0 0 0 1 0 1 0
......................................................................................................................................................................................CATTATATTAAAGTGGCTCA................................................. 20 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................TAATAGATAATTGTTTATATATAT...................................................................................... 24 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 1 0 1
.....................................................................................................................................................................................CTGTTATATTAAAATGGCTC.................................................. 20 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:5297608-5297858 + dvi_15633 ATTTGAT---GTTAGAAGAGAAGG----GTTCAGGGTATTTCCTAGTCAGGAGCTCACGACTAGAACA-TCTTACTTGTTTGTATTTTGTGTTGTCACTAGCATACAC--------------------------------------------------ATAGTTGCAT-------------------------------AAATATATACATTGTA-------------------AATAA-------------------------------------------------------------------------T-----TGGAAATAC------------------------AT-----TA-------TTTA------------TTAACA---A--G--TATTTATA--ATTCC---------------------------------------------------------TCTA----------------------------------------------------------------------------------------------ACTT----A-AT--TATAATATAATTTTACCTAGTACTTTGAGCTGCGCTATGGTGGCAGCATTCGAA---ACTTCGGCTCTATGCC
droMoj3 scaffold_6680:15686533-15686760 + GGAGG-----------------------GTTCAGGGTATCTCCTAGTCGAGCAGTCTCGACTGGAGCCTTCTTACTTGTTTC----------------------------ATATTA---TGCTTT------------------------ATTTTA----AATTTGTTT---TTATTGCATTTATAATTTCTTTACCCGTTGAACTAAATTTAT-----------------------------------------------------------------------------------------------------------------------------------------TTTAA-----TTTTATA----------------------ATTAATT----------------------------------------------------------T--TATTTATTTATTAATA-----AGTTAGAAT-------------------------------------------------------------------------------------------------------------TCATATAAAATTAAATCTAACTAAGGGTTAAGCACTGGCAGCATA----TTTAAAACTT
droGri2 scaffold_15113:119107-119295 + AACAGAT---------------GG----GTTCAGGGTATATCCTAGTCGTACTCACTCGACTACAGCATTCTTACTTGTTAA----------------------------------------------------------------------------------------------------------------------------------------------GTAAAA-------------TTT--------------------GCAAATATTATTCCT-------------------------------------AGTGTAAAA------------------------TT-----AATTGAAT-------------------GAAG---TTTC----AGCT------------------------AATTACAAATA------------------------C-----TGTAAATCAACGCAGA-TTTCCATGATTACAATTTGGT--------------------------------------------------------------------------------------TAATCATATTAC----------------------------------------TTGATTGTTT
droWil2 scf2_1100000004949:1142800-1142907 - ACTAGTAGAG------------------A-------------------------------------------------------------------------------A-TCAAAC---TATTTCCAATTTGTTACACATTTATGATTTATGATATATGTACATACAT-------------------------------ACATACATATGTAACA-------------------TATGT-------------------------------------------------------------------------A-----TGTACATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTATGTAT
dp5 3:786755-786843 + TTATTCGTTT-----------------------------------------------------------------------GTTTTTATTTATCCCCTCTCCATACAT--------------------------------------------------TCATATGTAT-------------------------------AAATATACACAACGCA-------------------AATAA-------------------------------------------------------------------------A-----AGTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAAAATATTTGTT
droPer2 scaffold_3:2066213-2066390 - TCTGACT-----------------TGTA--------------------------------------------------------------------------------ACTAATTT---TGCATC----------------------------------------------------------------------------------------TGCATGGTTGTGCATGCTACTTAAGTCTGTCTATTGAATACTATTTCAAATAGTTAAATCATTC---------------------------------------------------------------------------------------------------------------A---A--G-------------------------------CGATTAAAACTG-------------------------------ACCAAATCCCTTGAA------------------------------------------------------------------------------------------------------------ACACTTTAGTATTTTCAATTTCGCTATGGTGCTGGCATACGCA---ATTTCGGAGCCATACT
droAna3 scaffold_13337:2452584-2452727 - ATATACT--------------------------------------------------------------------------------------------------------------------------------------------------------TAGGTATAT-------------------------------ATATATATATGGTATA-------------------TATTA-------------------------------------------------------------------------C-----TTTTATAAA------------------------AT-----TA-------TATA------------TTACTA---T--A--TATCAATA--GT--------TTTTACACTTGAATCAAATTGATTTAATAACAAATTT--CA----------------------------------------------------------------------------------------TTGGGGTGGATTTTTTG-----------------ATGCT-----------------------------------------------------------TAAATTTAAT
droBip1 scf7180000396691:2848605-2848696 - ATAATTCAAA------------------A-------------------------------------------------------------------------------A-AAATAC---CAATTT----------------------------------------------------------------------------------------TA------------------------------------------------------------AATAAT-------------------------------------AATAAATAA------------------------AT-----AATAAAAT-------------------AAAA---AATA----TTTT------------------------GAATAAAAATG-------------------------------ATTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAATAAAATT
droKik1 scf7180000298192:59524-59631 - ATATATA--------------------------------------------------------------------------------------------------------------------------------------------------------TATATATAT-------------------------------ATATATATATATTATA-------------------AAAAG-------------------------------------------------------------------------T-----CATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------ATGCAGAAT-------------------------------------------------------------------------------------------------------------TTTAAAAACTATTATTTAATTAATTGTTTAATTTAATTTA---ATTTGATCAATACTCT
droFic1 scf7180000454055:1643432-1643586 + TTGCCAA--------------------------------------------------------------------------------------------------------------------------------------------------------AACCTGTAC----------ATACATAATTTAAGCATGCGTAAAACAAAATGCCG-----------------------------------------------------------------------------------------------------------------------------------------TCTAA-----CTTAACA----------------------ATT---ATA------TG----------------------------------------------------ATACATTT-TTAATCAATTGAAATCT-------------------------------------------------------------------------------------------------------------TTCCTTTAGTACTTTCAATTGCGTTTTGGTTCCGGCATACGCA---ATTTGGGCTCTTTTCT
droEle1 scf7180000491044:1238515-1238704 - GTATTAT--------------------------------------------------------------------------------------------------------------------------------------------------------TAACAATGC-------------------------------ATATTTA----------ATTGTTTAATTTAA-------------TAT--------------------TTAAATATTTCAACT-------------------------------------AATTTAAAA------------------------TAGTTAGTA-------TTTG------------ACTTAA---A--T--ATTTTTTA--TTAT--------------------------------------------------AT-----TAAAATTTGATTTAAA-TTTAAA--TTTAAAATTTAGAAAATTGGAAAAA---------------------------------GAGATTTCTGAGCCTTGGGGACTTTAGTAAACAT-----------------------------------------------------------TCTATATGCT
droRho1 scf7180000761552:1487-1653 + GGGTATC---------------------------------TGATAGTCGGGG-CACCCGACTATAGCGTTCTCTCTTGTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACTTGAGACGTC----------------------------A-----CACAAGGGAGCCATATGTAAGGCTTATTTTTGTAT-----TA-------TTTA------------TTAACA---C--G--TCCTTATG--ACACATCTGCCTTAAGACTTACAATAATCTGA---------------------------------------------------------------------------------------------------------------------------------------------------------------TAGT------------------------------------------CTTTTGGACT
droBia1 scf7180000302113:1932004-1932170 + TTTTATT-----------------TGCT---------------------------------------------------------------------------------TTTTGTGTGTGTTTCCCAGCATGTTT------------------------------CA-------------------------------------------------------------------------------------------------------TTACCATATGCATC-----------------------------TTGTA---------------------------------------------------CATAGCCATGCATCCTATAAAAT---ATC------TGTTCT----------------------------------------------------GT-----TTCTGTTTGATTTCGT------------------------------------------------------------------------------------------------------------TTATCCTAGTACTTCGAGAGGCGATTCGATCGGAGGGTTCGCA---TCTTTGGATCCTGCCT
droTak1 scf7180000415242:34026-34195 - TTTTATT-----------------TATT--------------------------------------------------------------------------------GTTTTGTGTGTGTTTCCCAGCATGTTT------------------------------CA------------------------------------------------------------------------------------------------------CTTATCCAAAGCATT-----------------------------TTGTA---------------------------------------------------CATAACCATGCATCCTATAAAAA---AGT------TGTTC-----------TT----------------------------------------GT-----TTCTGTTTGATTTCGT------------------------------------------------------------------------------------------------------------TTTTCTTAGTACTTTGAAAGGCGTTTCGATCGACGGGTTCGCA---TCTTTGGATCCTGTCT
droEug1 scf7180000408193:452963-453064 + ATATATG--------------------------------------------------------------------------------------------------------------------------------------------------------TACATTCAT-------------------------------AAATATGTACATAGTA-------------------ACCAA-------------------------------------------------------------------------A-----TGTAACCAA------------------------AC-----TG-------TATG------------TTAGGA---A--A--GCTTTCCT--CT----------------------------------------------------AC-----TTCTA----------------------------------------------------------------------------------------------AGAT----A-CT------------------------------------------------------------TTTCAACGATTCTAC
dm3 chr2L:116908-117131 + GTCCGCA---TTTACACTAGCTGA----GTAAGGGGTATCTGATATTCGGGG-AACTCGACTATAGTATTCTCTCTTGTTTATATTTAATATTTCC-----------------------------------------------------ATGATATACATATAAACTTACGC--CAT----------------------------------CGCA-------------------TAAAA-------------------------------------------------------------------------A----------------------------------------------------------------------------------AGT------A-----------------------------------------------------------AA-CCCACTAATATTTTTTACAT---------------------ATTTGGTGAAAACAATTTTATGCGTACTTAATAATTTATTCGTAGTGTTTCTTCTG----CCT---------------------------------------------------------------------TGTTAACAATATGAT
droSim2 3r:21237667-21237789 + TGAATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTCTCT-----------------------------------------------------------------------------------------------------------------------------------------GTTAA-----CTTTATA----------------------ATTAATA----------------------------------------------------------TGTAAATTCTAA-CCAACTAACTCATTTTGAAC-------------------------------------------------------------------------------------------------------------CCTTAGTACTTTCAATTGCGCTATGGCGCTGGCATACGCA---ATTTGGGCTCAGTTCT
droSec2 scaffold_10:50307-50463 - TTAAATGGGA-----------ATT----GTTTTGGTT---CCTGGTTCACAACCTCTCTATTTGAATG-TCTCACAAATAAATATATATTATTATC-----------------------------------------------------AATATTTACATACGGAAATACAT--GTACGCATATAGTATATAAACACATATATATATACATTGTG-------------------TATAA-------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAATGTA
droYak3 2R:3680018-3680170 - TTCTAAGTAA----------------------A-----------------------------------------------------------------------------GAGCTT---AGATCC----------------------------------------------------------------------------------------TAAAGAATTATATTTAT-------------TAT--------------------TTACTTATTTTAAAAATACTGTACTCTTACTCTGTACTCTGAATTTT-----TGAACACAA------------------------AT-----TA-------TTTA------------ATACAA---G--T--TATTTTTA--ATATC---------------------------------------------------------TTTA----------------------------------------------------------------------------------------------ATTT----T-GG--TGTC-----------------------------------------------------------GCATCTTTTT
droEre2 scaffold_4820:6307804-6307912 - TTGTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTATA----------------------ATTGATA----------------------------------------------------------TGTGAAACCTAA-CCAACTAACTAATTTTGAAC-------------------------------------------------------------------------------------------------------------CTTCAGTACTTTCAATTGCGCTACGGCGCTGGCATACGCA---ACTTGGGCTCGGTTCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATTTGAT---GTTAGAAGAGAAGG----GTTCAGGGTATTTCCTAGTCAGGAGCTCACGACTAGAACA-TCTTACTTGTTTGTATTTTGTGTTGTCACTAGCATACAC--------------------------------------------------ATAGTTGCAT-------------------------------AAATATATACATTGTA-------------------AATAA-------------------------------------------------------------------------T-----TGGAAATAC------------------------AT-----TA-------TTTA------------TTAACA---A--G--TATTTATA--ATTCC---------------------------------------------------------TCTA----------------------------------------------------------------------------------------------ACTT----A-AT--TATAATATAATTTTACCTAGTACTTTGAGCTGCGCTATGGTGGCAGCATTCGAA---ACTTCGGCTCTATGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.TTTGAT---GTTAGAAGAGAAGG----GTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.........................................................CGACTAGAACA-TCTTACTTGTTTGTAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
....................................TATTTCCTAGTCAGGAGCTCACGACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
.............................TTCAGGGTATTTCCTAGTCAGGAGCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501000000000000000000000000000000000000001000000000000000000000000
......................................................TCACGACTAGAACA-TCTTACTTGTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.251001000000000000000000000000000000000000000000000000000000000000
....................AAGG----GTTCAGGGTATTTCCTAGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.251001000000000000000000000000000000000000000000000000000000000000
.....................AGG----GTTCAGGGTATTTCCTAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000100000000000000000000000000000000000000000000000000000000
droMoj3
GGAGG-----------------------GTTCAGGGTATCTCCTAGTCGAGCAGTCTCGACTGGAGCCTTCTTACTTGTTTC----------------------------ATATTA---TGCTTT------------------------ATTTTA----AATTTGTTT---TTATTGCATTTATAATTTCTTTACCCGTTGAACTAAATTTAT-----------------------------------------------------------------------------------------------------------------------------------------TTTAA-----TTTTATA----------------------ATTAATT----------------------------------------------------------T--TATTTATTTATTAATA-----AGTTAGAAT-------------------------------------------------------------------------------------------------------------TCATATAAAATTAAATCTAACTAAGGGTTAAGCACTGGCAGCATA----TTTAAAACTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................CTCGACTGGAGCCTTCTTACTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153000003
.......................................................CTCGACTGGAGCCTTCTTACTTGTTTC----------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.153300000
..........................................................GACTGGAGCCTTCTTACTTGTTTC----------------------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
...........................................TAGTCGAGCAGTCTCGACTGGAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
................................................GAGCAGTCTCGACTGGAGCCTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
droGri2
AACAGAT---------------GG----GTTCAGGGTATATCCTAGTCGTACTCACTCGACTACAGCATTCTTACTTGTTAA----------------------------------------------------------------------------------------------------------------------------------------------GTAAAA-------------TTT--------------------GCAAATATTATTCCT-------------------------------------AGTGTAAAA------------------------TT-----AATTGAAT-------------------GAAG---TTTC----AGCT------------------------AATTACAAATA------------------------C-----TGTAAATCAACGCAGA-TTTCCATGATTACAATTTGGT--------------------------------------------------------------------------------------TAATCATATTAC----------------------------------------TTGATTGTTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ACTAGTAGAG------------------A-------------------------------------------------------------------------------A-TCAAAC---TATTTCCAATTTGTTACACATTTATGATTTATGATATATGTACATACAT-------------------------------ACATACATATGTAACA-------------------TATGT-------------------------------------------------------------------------A-----TGTACATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTATGTATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................A-------------------TATGT-------------------------------------------------------------------------A-----TGTACATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTATG...2340.25101000
..........................................................................................................................................................................................................................................TATGT-------------------------------------------------------------------------A-----TGTACATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTATGTA.2470.14101000
dp5
TTATTCGTTT-----------------------------------------------------------------------GTTTTTATTTATCCCCTCTCCATACAT--------------------------------------------------TCATATGTAT-------------------------------AAATATACACAACGCA-------------------AATAA-------------------------------------------------------------------------A-----AGTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAAAATATTTGTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TCTGACT-----------------TGTA--------------------------------------------------------------------------------ACTAATTT---TGCATC----------------------------------------------------------------------------------------TGCATGGTTGTGCATGCTACTTAAGTCTGTCTATTGAATACTATTTCAAATAGTTAAATCATTC---------------------------------------------------------------------------------------------------------------A---A--G-------------------------------CGATTAAAACTG-------------------------------ACCAAATCCCTTGAA------------------------------------------------------------------------------------------------------------ACACTTTAGTATTTTCAATTTCGCTATGGTGCTGGCATACGCA---ATTTCGGAGCCATACTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
ATATACT--------------------------------------------------------------------------------------------------------------------------------------------------------TAGGTATAT-------------------------------ATATATATATGGTATA-------------------TATTA-------------------------------------------------------------------------C-----TTTTATAAA------------------------AT-----TA-------TATA------------TTACTA---T--A--TATCAATA--GT--------TTTTACACTTGAATCAAATTGATTTAATAACAAATTT--CA----------------------------------------------------------------------------------------TTGGGGTGGATTTTTTG-----------------ATGCT-----------------------------------------------------------TAAATTTAATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATAATTCAAA------------------A-------------------------------------------------------------------------------A-AAATAC---CAATTT----------------------------------------------------------------------------------------TA------------------------------------------------------------AATAAT-------------------------------------AATAAATAA------------------------AT-----AATAAAAT-------------------AAAA---AATA----TTTT------------------------GAATAAAAATG-------------------------------ATTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAATAAAATTSizeHit CountTotal NormTotal
No Reads
droKik1
ATATATA--------------------------------------------------------------------------------------------------------------------------------------------------------TATATATAT-------------------------------ATATATATATATTATA-------------------AAAAG-------------------------------------------------------------------------T-----CATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------ATGCAGAAT-------------------------------------------------------------------------------------------------------------TTTAAAAACTATTATTTAATTAATTGTTTAATTTAATTTA---ATTTGATCAATACTCTSizeHit CountTotal NormTotal
No Reads
droFic1
TTGCCAA--------------------------------------------------------------------------------------------------------------------------------------------------------AACCTGTAC----------ATACATAATTTAAGCATGCGTAAAACAAAATGCCG-----------------------------------------------------------------------------------------------------------------------------------------TCTAA-----CTTAACA----------------------ATT---ATA------TG----------------------------------------------------ATACATTT-TTAATCAATTGAAATCT-------------------------------------------------------------------------------------------------------------TTCCTTTAGTACTTTCAATTGCGTTTTGGTTCCGGCATACGCA---ATTTGGGCTCTTTTCTSizeHit CountTotal NormTotal
No Reads
droEle1
GTATTAT--------------------------------------------------------------------------------------------------------------------------------------------------------TAACAATGC-------------------------------ATATTTA----------ATTGTTTAATTTAA-------------TAT--------------------TTAAATATTTCAACT-------------------------------------AATTTAAAA------------------------TAGTTAGTA-------TTTG------------ACTTAA---A--T--ATTTTTTA--TTAT--------------------------------------------------AT-----TAAAATTTGATTTAAA-TTTAAA--TTTAAAATTTAGAAAATTGGAAAAA---------------------------------GAGATTTCTGAGCCTTGGGGACTTTAGTAAACAT-----------------------------------------------------------TCTATATGCTSizeHit CountTotal NormTotal
No Reads
droRho1
GGGTATC---------------------------------TGATAGTCGGGG-CACCCGACTATAGCGTTCTCTCTTGTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACTTGAGACGTC----------------------------A-----CACAAGGGAGCCATATGTAAGGCTTATTTTTGTAT-----TA-------TTTA------------TTAACA---C--G--TCCTTATG--ACACATCTGCCTTAAGACTTACAATAATCTGA---------------------------------------------------------------------------------------------------------------------------------------------------------------TAGT------------------------------------------CTTTTGGACTSizeHit CountTotal NormTotal
No Reads
droBia1
TTTTATT-----------------TGCT---------------------------------------------------------------------------------TTTTGTGTGTGTTTCCCAGCATGTTT------------------------------CA-------------------------------------------------------------------------------------------------------TTACCATATGCATC-----------------------------TTGTA---------------------------------------------------CATAGCCATGCATCCTATAAAAT---ATC------TGTTCT----------------------------------------------------GT-----TTCTGTTTGATTTCGT------------------------------------------------------------------------------------------------------------TTATCCTAGTACTTCGAGAGGCGATTCGATCGGAGGGTTCGCA---TCTTTGGATCCTGCCTSizeHit CountTotal NormTotal
No Reads
droTak1
TTTTATT-----------------TATT--------------------------------------------------------------------------------GTTTTGTGTGTGTTTCCCAGCATGTTT------------------------------CA------------------------------------------------------------------------------------------------------CTTATCCAAAGCATT-----------------------------TTGTA---------------------------------------------------CATAACCATGCATCCTATAAAAA---AGT------TGTTC-----------TT----------------------------------------GT-----TTCTGTTTGATTTCGT------------------------------------------------------------------------------------------------------------TTTTCTTAGTACTTTGAAAGGCGTTTCGATCGACGGGTTCGCA---TCTTTGGATCCTGTCTSizeHit CountTotal NormTotal
No Reads
droEug1
ATATATG--------------------------------------------------------------------------------------------------------------------------------------------------------TACATTCAT-------------------------------AAATATGTACATAGTA-------------------ACCAA-------------------------------------------------------------------------A-----TGTAACCAA------------------------AC-----TG-------TATG------------TTAGGA---A--A--GCTTTCCT--CT----------------------------------------------------AC-----TTCTA----------------------------------------------------------------------------------------------AGAT----A-CT------------------------------------------------------------TTTCAACGATTCTACSizeHit CountTotal NormTotal
No Reads
dm3
GTCCGCA---TTTACACTAGCTGA----GTAAGGGGTATCTGATATTCGGGG-AACTCGACTATAGTATTCTCTCTTGTTTATATTTAATATTTCC-----------------------------------------------------ATGATATACATATAAACTTACGC--CAT----------------------------------CGCA-------------------TAAAA-------------------------------------------------------------------------A----------------------------------------------------------------------------------AGT------A-----------------------------------------------------------AA-CCCACTAATATTTTTTACAT---------------------ATTTGGTGAAAACAATTTTATGCGTACTTAATAATTTATTCGTAGTGTTTCTTCTG----CCT---------------------------------------------------------------------TGTTAACAATATGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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..............................................................................................................................................................ATATAAACTTACGC--CAT----------------------------------CG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTAATAATTTATTCGTAG......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACAATTTTATGCGTACT.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCGTAGTGTTTCTTCTG----A......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTTTATGCGTACTTAATA..................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................ATATAAACTTACGC--CAT----------------------------------CGCA-------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAATTTTATGCGTACTT......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................................................................................................................................CAT----------------------------------CGCA-------------------TAAAA-------------------------------------------------------------------------A----------------------------------------------------------------------------------AGT------A-----------------------------------------------------------AA-CC..........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTGTTTCTTCTG----CCT---------------------------------------------------------------------TGA............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTCGTAGTGTTTCTTCTG----CCT---------------------------------------------------------------------TGT............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAGTGTTTCTTCTG----CCT---------------------------------------------------------------------TGT............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAT---------------------ATTTGGTGAAAACA.....................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTTACACTAGCTGA----GTAAGGGGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TCTGATATTCGGGG-AACTCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGAAAACAATTTTATGCG...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..............................AAGGGGTATCTGATATTCGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTAATAATTTATTCGTA.......................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTCGTAGTGTTTCTTCTG----.......................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
............TACACTAGCTGA----GTAAGGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTCTG----CCT---------------------------------------------------------------------TGTTAAC........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTTACACTAGCTGA----GTAAGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTCTG----CCT---------------------------------------------------------------------TGTTAACA.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................TATAAACTTACGC--CAT----------------------------------CGCA-------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGAAAACAATTTTATGCGT..........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................TAGCTGA----GTAAGGGGTATCTGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.6740000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ATATTCGGGG-AACTCGACTATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................TCGACTATAGTATTCTCTCTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.5040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TATCTGATATTCGGGG-AACTCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TCGACTATAGTATTCTCTCTTGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................ACTCGACTATAGTATTCTCTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.5040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ATCTGATATTCGGGG-AACTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TTCGGGG-AACTCGACTATAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........TTACACTAGCTGA----GTAAGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................ATATTCGGGG-AACTCGACTATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTATAGTATTCTCTCTTGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.5040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................ACTCGACTATAGTATTCTCTCTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GGG-AACTCGACTATAGTATTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.4440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CGACTATAGTATTCTCTCTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTCGACTATAGTATTCTCTCTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................ACTCGACTATAGTATTCTCTCTTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTCGACTATAGTATTCTCTCTTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTCGACTATAGTATTCTCTCTTGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CTCGACTATAGTATTCTCTCTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................ACTCGACTATAGTATTCTCTCTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTATAGTATTCTCTCTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.3140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TCGACTATAGTATTCTCTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CACTAGCTGA----GTAAGGGGTATCTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................GGTATCTGATATTCGGGG-AAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................CTAGCTGA----GTAAGGGGTATCTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................AACTCGACTATAGTATTCTCTCTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GGTATCTGATATTCGGGG-A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................GCTGA----GTAAGGGGTATCTGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................AACTCGACTATAGTATTCTCTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTAGCTGA----GTAAGGGGTATCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................CGACTATAGTATTCTCTCTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TCGGGG-AACTCGACTATAGTATTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGCA---TTTACACTAGCTGA----GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GGG-AACTCGACTATAGTATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CACTAGCTGA----GTAAGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGAATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTCTCT-----------------------------------------------------------------------------------------------------------------------------------------GTTAA-----CTTTATA----------------------ATTAATA----------------------------------------------------------TGTAAATTCTAA-CCAACTAACTCATTTTGAAC-------------------------------------------------------------------------------------------------------------CCTTAGTACTTTCAATTGCGCTATGGCGCTGGCATACGCA---ATTTGGGCTCAGTTCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................TCT-----------------------------------------------------------------------------------------------------------------------------------------GTTAA-----CTTTATA----------------------ATTAATA----------------------------------------------------------.........................................................................................................................................................................................................2211.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAACTCATTTTGAAC-------------------------------------------------------------------------------------------------------------CC.........................................................2011.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTAA-CCAACTAACTCATTTT............................................................................................................................................................................2411.00100010000000000000
droSec2
TTAAATGGGA-----------ATT----GTTTTGGTT---CCTGGTTCACAACCTCTCTATTTGAATG-TCTCACAAATAAATATATATTATTATC-----------------------------------------------------AATATTTACATACGGAAATACAT--GTACGCATATAGTATATAAACACATATATATATACATTGTG-------------------TATAA-------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAATGTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TTCTAAGTAA----------------------A-----------------------------------------------------------------------------GAGCTT---AGATCC----------------------------------------------------------------------------------------TAAAGAATTATATTTAT-------------TAT--------------------TTACTTATTTTAAAAATACTGTACTCTTACTCTGTACTCTGAATTTT-----TGAACACAA------------------------AT-----TA-------TTTA------------ATACAA---G--T--TATTTTTA--ATATC---------------------------------------------------------TTTA----------------------------------------------------------------------------------------------ATTT----T-GG--TGTC-----------------------------------------------------------GCATCTTTTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TTGTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTATA----------------------ATTGATA----------------------------------------------------------TGTGAAACCTAA-CCAACTAACTAATTTTGAAC-------------------------------------------------------------------------------------------------------------CTTCAGTACTTTCAATTGCGCTACGGCGCTGGCATACGCA---ACTTGGGCTCGGTTCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/16/2015 at 08:29 PM