ID:

dvi_15610

 Coordinate:

scaffold_13047:5215861-5215988 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.4 -11.1

Flybase annnotation

exon [dvir_GLEANR_8691:2]; CDS [Dvir\GJ23334-cds]; exon [dvir_GLEANR_8691:3]; CDS [Dvir\GJ23334-cds]; intron [Dvir\GJ23334-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_12963:8576391-8576410 -
  2. dvi_15610  scaffold_13047:5215941-5215960 -

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------##################################################
AAAGAGAATCGGGCCGCAAAGTGCAGTTGGAAAACATCCAAGCCGGAAAGGTATGTGTGTGCGTGTGACTGCGCTAGTGTGTGCGTGTGTGTAACGCTTGTGACTCACATGTCTCTTGCGTCTTTCGTGCAATTGTGACCATCTGTTTACAAGATTGTAATTTTGTTGTCCCTTTCAGGCTATTGCTGATGTGATACGCACATGCTTGGGCCCCCAGGCCATGCTAAA
******************************************************************************....(((((((.((.((....)).)).)))))))..................************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 M047
female body
 M061
embryo
 SRR060686
Argx9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 SRR060679
140x9_testes_total
 SRR060672
9x160_females_carcasses_total
 M028
head
 SRR060677
Argx9_ovaries_total
 SRR060683
160_testes_total
 V047
embryo
 SRR060660
Argentina_ovaries_total
 SRR060669
160x9_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060689
160x9_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060681
Argx9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 V116
male body		 M027
male body		 SRR1106727
larvae
...............................AAACATCCAAGCCGGAAAGGCT............................................................................................................................................................................... 22 2 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TTGTGCGTGTGACAGCGCTAT....................................................................................................................................................... 21 3 4 2.00 8 3 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATTGCTGATGTGATACGCA............................ 19 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................AAAGTGCAGTTGGAAAAC................................................................................................................................................................................................. 18 0 1 2.00 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TTGTGCGTGTGACAGCGCT......................................................................................................................................................... 19 2 6 1.67 10 8 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................TTGTGCGTGTGACTGCGGT......................................................................................................................................................... 19 2 5 1.40 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GAAAGCATCTAAGCGGGAAA................................................................................................................................................................................... 20 3 10 1.10 11 1 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 1 0 1 0 0
AAAGAGAATCGGGCCGCAAAGTGCAG.......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AAGTGCAGTTGGAAAACATCCAAGC......................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AGTGCAGTTGGAAAACATCCA............................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AATCGGGCCGCAAAGTGCAGTTGGAAAAC................................................................................................................................................................................................. 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTTGGAAAACATCCAAGCCGGAAA................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TTGTGCGTGTGACAGCGGTAG....................................................................................................................................................... 21 3 9 1.00 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGCAAAGTGCAGTTGGAAAA.................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TGCTGATGTGATACGCACATGCTTGG................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................GTGATACGCACATGCTTGGGC................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATTGCTGATGTGATACGCACATG........................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................AAAGTGAAGTTGGAAAACAT............................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................GATACGCACATGCTTGGGC................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTTGTGCGTGTGACAGCGCTA........................................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CTCACATGTCTCTTGCGTCTTTCGTGC.................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TCGGGCCGCAAAGTGCAGTTGGAAAA.................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AGTGCAGTTGGAAACCATCCAAGC......................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................AAACATCAAAGCCGGAAAGG................................................................................................................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TGCAGTTGGAAAACATCCAAGCC........................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AAAACATCCAAGCCGGAAAGA................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................AAACATCCAAGCCGGAAAGGC................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AAAACATCCAAGCCGGAAAGGC................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......ATCGGGCCGCAAAGTGCAGT......................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CGGGCCGCAAAGTGCAGTTGGAAAAC................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AAAGAGAATCGGGCCGCAAAGT.............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................ATACGCACATGCTTGGGCCCCCAGGC......... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TTGTGCGTGTGACAGCGCTATT...................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GGGCCGCAAAGTGCAGTTGGAAAAC................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AAGTGCAGTTGGAAAACATCCA............................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CGTGTGCGTGTGACTGCGG.......................................................................................................................................................... 19 2 16 0.56 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GTGTGCGTGTGTGTAACGCT.................................................................................................................................. 20 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTGCGCGTGTGACAGCGCT......................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TTGCGCGTGTGACTGCGTTAGT...................................................................................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CGTGTGCGTGTGACTGCG........................................................................................................................................................... 18 1 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTGTGCGTGTGACTGCGG.......................................................................................................................................................... 18 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TGGTGCGTGTGACTGCGGTA........................................................................................................................................................ 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CTTGTGCGTGTGACAGCGCTA........................................................................................................................................................ 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTTGTGCGTGTGACCGCGCTC........................................................................................................................................................ 21 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTTGTGCGTGTGACCGCGCTT........................................................................................................................................................ 21 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AGGCTACTGCTGAAGTGA.................................. 18 2 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGTGTGCGTGTGACAGCGGT......................................................................................................................................................... 20 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TTGTGCGTGTGACGGCGTTA........................................................................................................................................................ 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GGTGTGCGTGTGACAGCGC.......................................................................................................................................................... 19 2 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ACCATCTGGTCACAAGAC......................................................................... 18 3 20 0.10 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................GAATGTGTGAGCGTGTGACTG............................................................................................................................................................. 21 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................CGTGTGCGTGTGACCGCGGT......................................................................................................................................................... 20 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TATGTGCGTGTGACAGCGCTT........................................................................................................................................................ 21 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................GTACGTGTGAGTAACGCGT................................................................................................................................. 19 3 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTGTGCGTGTGACGGCGTT......................................................................................................................................................... 19 2 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTGTGCGTGTGACAGCGGT......................................................................................................................................................... 19 2 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CGGGTGCGTGTGACTGCGGT......................................................................................................................................................... 20 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTTGTGCGTGTGACCGCGGT......................................................................................................................................................... 20 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGTGTGCGTGTGACAGCGGTTGT...................................................................................................................................................... 23 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ATGTTCGTGTGACCGCGCT......................................................................................................................................................... 19 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTTGTGCGTGTGACAGCGCCA........................................................................................................................................................ 21 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGTGTGCGAGTGACTGCGGT......................................................................................................................................................... 20 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTGTGCGTGGGACAGCGGT......................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................GCGTGTTACTACGCT......................................................................................................................................................... 15 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................GTGCGCGTGTGACTGCGG.......................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................GTGTGAGTAACGCGTGGG.............................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CGTGTGCGCGTGACTGCG........................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGTGTGCGTGTGACGGCGGTTG....................................................................................................................................................... 22 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................CGTGCGCGTGTAACTGCGC.......................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................ATGTGCGTGTGACAGCGCTT........................................................................................................................................................ 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTGTGCGTGTGACAGCGCCAA....................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTTCTCTTAGCCCGGCGTTTCACGTCAACCTTTTGTAGGTTCGGCCTTTCCATACACACACGCACACTGACGCGATCACACACGCACACACATTGCGAACACTGAGTGTACAGAGAACGCAGAAAGCACGTTAACACTGGTAGACAAATGTTCTAACATTAAAACAACAGGGAAAGTCCGATAACGACTACACTATGCGTGTACGAACCCGGGGGTCCGGTACGATTT
**************************************************************************************************....(((((((.((.((....)).)).)))))))..................****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 SRR060656
9x160_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060687
9_0-2h_embryos_total
....................................................................................................................................................................CGGCAGGGAAAGTCCGATAA............................................ 20 2 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................AGCGGCTACACTATGCGTGTTC........................ 22 3 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................GTTCGAGAACGACTGCACTAT................................ 21 3 2 0.50 1 0 0 1 0 0
............................................................................................................................AGCACGTTTATACTGGTAAAC................................................................................... 21 3 6 0.17 1 0 0 0 1 0
........................................................................................................................................CTGGGGGACAAATGTTCT.......................................................................... 18 2 7 0.14 1 0 0 0 0 1
.........................................................................................................................................................................................GACTACACTGGGCGTGTTC........................ 19 3 15 0.07 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:5215811-5216038 - dvi_15610 AAAGAGAATCGGGCCGCAAAGTGCAGTTGGAAAACATCCAAGCCGGAAAGGTATGTGTGTGCGTGTGACTGCGCTAGTGTGTGCGTGTGTGTAACGCTTGTGACTCACATGTCT-----------------------C--TTGCGTCTTTCGTGCAAT-TGTGACCATCTGTTTACAAGATTGTAATT-TTGTTG-TCCCTT--------TCAGGCTATTGCTGATGTGATACGCACATGCTTGGGCCCCCAGGCCATGCTAAA
droMoj3 scaffold_6540:21205927-21206135 + dmo_2018 AAAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAATATTCAAGCCGGAAAGGTATGTGTGTGCGT--------------GC----GTGTGTGTAATGCTTGTGACTCACATGTCTC--------------------------TGCGTCTATCGAGCAAA-TTTGGCCATCTGTTTGCAAGATTGTAAAA-TTAATG-ATAATT--------TCAGGCTATTGCCGATGTGATACGCACATGCTTGGGCCCCCAGGCTATGCTGAA
droGri2 scaffold_14906:10616223-10616427 - dgr_216 AAAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAATATTCAAGCCGGAAAGGTATGAGTGTGTGT--GTCTGTGCCTGTGTGTGCGTGT---------ATGTGACTCACATGTCTGC----------------------------GTTTG-----------CTGACCATCTGTTGAGAAGATTGTAATA-GTGTTGGCTCTTT--------TTAGGCAATTGCTGATGTGATACGCACCTGCCTGGGCCCACAGGCCATGCTGAA
droWil2 scf2_1100000004943:5168001-5168210 - AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAATATTCAAGCCGGAAAGGTATGAGTGTGTGT----TTGCGTTTGTGT-----------------GTGTGACTCACATGTCTGG---TGTA------GC-CGCACC----GCGTTAAACATGCATTGGGTGGCCATCTGTTGACTGAT-T---TTGA-------ATTTTT--------TCAGGCTATTGCTGATGTGATACGGACATGTTTGGGCCCACAGGCCATGTTGAA
dp5 2:17453330-17453524 + AACGCGAATCTGGCCGCAAAGTGCAGTTGGAGAATATTCAAGCCGGAAAGGTAAGTGTGTGCGT---------------------------------GTGTGACTCACATGGCTGTGTTTGTC------GAGAGCTCCTCG---------CCTGCATT-GGTGACCATCTGCTGACATTA-----TTGC-------TGTTTT--------CTAGGCTATTGCCGATGTCATTCGCACTTGCCTAGGACCACAGGCAATGCTGAA
droPer2 scaffold_0:11300608-11300802 + AACGCGAATCTGGCCGCAAAGTGCAGTTGGAGAATATTCAAGCCGGAAAGGTAAGTGTGTTCGT---------------------------------GTGTGACTCACATGGCTGGGTTTGTA------GAGAGCTCCTCG---------CCTGCGTT-GGTGGCCATCTGCTGACATTA-----TTGC-------TGTTTT--------CTAGGCTATTGCCGATGTGATTCGCACTTGCCTAGGACCACAGGCAATGCTGAA
droAna3 scaffold_13340:7410663-7410854 - AGCGCGAATCGGGCCGCAAAGTGCAGTTGGAGAACATTCAAGCCGGAAAGGTATGAGTGTGTGT---------------------------------GAGTGACTCACATGTCTGGGAGTTTAGGTT----------------TGGTA-----------GGCGACCATCTGCTGATTGGA-----AAAC-------CTTTTTGTCCTCTAACAGGCCATCGCTGATGTGATTCGCACCTGCTTGGGCCCCCAGGCCATGTTGAA
droBip1 scf7180000396708:1442428-1442619 + AGCGCGAATCGGGCCGCAAAGTCCAGTTGGAGAACATTCAAGCCGGAAAGGTATGAGTGTGTGT---------------------------------GAGTGACTCACATGTCTGGGAGTTAAGGTT----------------TGCTCT-----------GCGACCATCTGCTAATTGGA-----AAAC-------CTTTTTGTCTTGAAACAGGCCATCGCTGATGTGATCCGCACCTGCTTGGGGCCCCAGGCCATGTTGAA
droKik1 scf7180000302475:71386-71572 - AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTATGTGTGTGTGT--------------GT-----------------GCGTGACTCACATGTCTGGGTCTGCGGTTATCA---------------TTCT----------CCCGGCCATCTGCTCATGAGA------TTC-------CCCATT--------CCAGGCCATCGCTGATGTGATCAGGACATGTCTGGGCCCCCAGGCCATGCTGAA
droFic1 scf7180000453796:108888-109068 - AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTAT-----------------------------------------------GACTCACATGTCTGGGATTTGGGAATAGGTTG---TC--CATCATTTT----------CTAGGCCATCTGCTGACTGAA-----ACC--------CATTTT--------TCAGGCCATCGCCGATGTGATACGCACCTGTCTGGGGCCTCAGGCCATGCTGAA
droEle1 scf7180000486474:1493755-1493935 + AGAGAGAATGGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTAT-----------------------------------------------GACTCACATGTCTGGGACTTGTGTCT-CGGGT---TT--TCGCGTTTT----------CCCGGCCATCTGCTGATCGAA-----ATCA-------CTTTTT--------CCAGGCCATCGCCGATGTGATACGCACCTGCCTGGGTCCCCAGGCCATGCTGAA
droRho1 scf7180000778413:9459-9638 - AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAATATCCAAGCCGGAAAGGTAT-----------------------------------------------GACTCACATGTCTGGGACTTGGGTCTC-GGTT---TT--TCGCGTTTT----------CCCGGCCATCTGCTGATTGAA-----ACTC-------CTT-TT--------TCAGGCCATCGCCGATGTGATCCGCACCTGCCTGGGGCCTCAGGCCATGCTGAA
droBia1 scf7180000299102:407044-407225 + AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTAT-----------------------------------------------GAGTCACATGTCTGGGACCTGGGTTTCGGGGT---TC--TCGTGCTCT----------ACCGGCCATCTGCTGATTAAA-----ACCC-------CTTTTT--------CCAGGCCATCGCCGATGTGATACGCACCTGCCTGGGGCCTCAGGCCATGCTGAA
droTak1 scf7180000415580:196960-197132 - AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTATG-------------------------------------------CATGACTCACATGTCTGGGTTT----------------TC--TCGTGCTCC----------GCCGGCCATCTGCTGATTAAA-----ACCC-------CCTTTT--------CCAGGCCATCGCCGATGTGATACGCACCTGCCTGGGGCCCCAGGCCATGCTGAA
droEug1 scf7180000409557:56258-56438 - AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATTCAAGCCGGAAAGGTAT-----------------------------------------------GACTCACATGTCTGGGATTTGGGTTTTCGAGT---TC--TCGTGTTTT-----------CTGGCCATCTGCTGACTGTA-----ACTA-------CTTTTT--------CCAGGCCATCGCCGATGTGATACGTACATGCCTGGGACCCCAGGCCATGCTGAA
dm3 chr3R:12473722-12473906 + AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTATG-------------------------------------------CGTGACTCACATGTCTGGGTCTTGGGTTTTTGTGT---TC--TCGCGTTTT-----------CCGACCATCTGTTGATTAAA-----ACGT-------CTTTTT--------CCAGGCCATCGCCGATGTGATACGCACATGTCTGGGGCCACAGGCCATGCTGAA
droSim2 3r:8776051-8776235 - dsi_30109 AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTATG-------------------------------------------CGTGACTCACATGTCTGGGTCTTGGGTTATTGTGT---TC--TCGCGTTTT-----------CTGACCATCTGCTGATTGAA-----ACGC-------CTTTTT--------CCAGGCCATCGCTGATGTGATACGCACATGTCTGGGGCCCCAGGCCATGTTGAA
droSec2 scaffold_12:1673384-1673568 - AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTATG-------------------------------------------CGTGACTCACATGTCTGGGTCTTGGGTTATTGTGT---TC--TCGCGTTTT-----------CTGACCATCTGCTGATTGAA-----ACGC-------CTTTTT--------CCAGGCCATCGCTGATGTGATACGCACATGTCTGGGGCCCCAGGCCATGCTGAA
droYak3 3R:11917264-11917448 - AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATTCAAGCCGGAAAGGTATG-------------------------------------------CGTGACTCACATGTCTGGGTCTTGGGTTTTCGTGT---TC--TCGCGTTTT-----------CCGACCATCTGCTGATTGAA-----ACGC-------CTTTTT--------TCAGGCCATCGCCGATGTGATACGCACATGCCTGGGGCCCCAGGCCATGCTGAA
droEre2 scaffold_4770:9157800-9157984 - AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATTCAAGCCGGAAAGGTATG-------------------------------------------CGTGACTCACATGTCTGGGTCTTGGGTTTTTGTGT---TC--TCGCCTTTT-----------CCGACCATCTGCTGATTTAA-----ACGG-------CTTTTT--------CCAGGCCATCGCCGATGTGATACGCACATGCCTGGGGCCCCAGGCCATGCTGAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AAAGAGAATCGGGCCGCAAAGTGCAGTTGGAAAACATCCAAGCCGGAAAGGTATGTGTGTGCGTGTGACTGCGCTAGTGTGTGCGTGTGTGTAACGCTTGTGACTCACATGTCT-----------------------C--TTGCGTCTTTCGTGCAAT-TGTGACCATCTGTTTACAAGATTGTAATT-TTGTTG-TCCCTT--------TCAGGCTATTGCTGATGTGATACGCACATGCTTGGGCCCCCAGGCCATGCTAAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................AAACATCCAAGCCGGAAAGGCT...................................................................................................................................................................................................................2212.002000000000000000000000000000000000000100000000000000000000001000
.........................................................................................................................................................................................................................ATTGCTGATGTGATACGCA............................1912.002000000000000000000000000000000000000200000000000000000000000000
.................AAAGTGCAGTTGGAAAAC.....................................................................................................................................................................................................................................1812.002000000000000010000000000001000000000000000000000000000000000000
AAAGAGAATCGGGCCGCAAAGTGCAG..............................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
..................AAGTGCAGTTGGAAAACATCCAAGC.............................................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
...................AGTGCAGTTGGAAAACATCCA................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
......AATCGGGCCGCAAAGTGCAGTTGGAAAAC.....................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.........................GTTGGAAAACATCCAAGCCGGAAA.......................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
..............CGCAAAGTGCAGTTGGAAAA......................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TGCTGATGTGATACGCACATGCTTGG...................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GTGATACGCACATGCTTGGGC.................2111.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ATTGCTGATGTGATACGCACATG........................2311.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GATACGCACATGCTTGGGC.................1911.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................CTCACATGTCT-----------------------C--TTGCGTCTTTCGTGC.............................................................................................................2711.001000000000000100000000000000000000000000000000000000000000000000
........TCGGGCCGCAAAGTGCAGTTGGAAAA......................................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
.....................TGCAGTTGGAAAACATCCAAGCC............................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
..............................AAAACATCCAAGCCGGAAAGA.....................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................AAACATCCAAGCCGGAAAGGC....................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..............................AAAACATCCAAGCCGGAAAGGC....................................................................................................................................................................................................................2211.001000000000000000000000000000000000100000000000000000000000000000
.......ATCGGGCCGCAAAGTGCAGT.............................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........CGGGCCGCAAAGTGCAGTTGGAAAAC.....................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
AAAGAGAATCGGGCCGCAAAGT..................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................ATACGCACATGCTTGGGCCCCCAGGC.........2611.001001000000000000000000000000000000000000000000000000000000000000
..........GGGCCGCAAAGTGCAGTTGGAAAAC.....................................................................................................................................................................................................................................2511.001000000000000100000000000000000000000000000000000000000000000000
..................AAGTGCAGTTGGAAAACATCCA................................................................................................................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................GTGTGCGTGTGTGTAACGCT......................................................................................................................................................................2020.501000000000010000000000000000000000000000000000000000000000000000
........................................................GTGTGCGTGTGACTGCGG..............................................................................................................................................................................................1840.251000000000000000000000000000000000000000000000000000000000000100
droMoj3
AAAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAATATTCAAGCCGGAAAGGTATGTGTGTGCGT--------------GC----GTGTGTGTAATGCTTGTGACTCACATGTCTC--------------------------TGCGTCTATCGAGCAAA-TTTGGCCATCTGTTTGCAAGATTGTAAAA-TTAATG-ATAATT--------TCAGGCTATTGCCGATGTGATACGCACATGCTTGGGCCCCCAGGCTATGCTGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................GCCGATGTGATACGCACATGCTTGGGC.................2711.001100000
.................................................................................................................................................................................AGATTGTAAAA-TTAATG-ATA.................................................................2011.001000010
...............................................................................................................................................................................................................................................GCTTGGGCCCCCAGGCTATGC....2111.001100000
...............GCAAAGTGCAGTTGGAGAAT.....................................................................................................................................................................................................................................2011.001000001
.......ATCGGGCCGCAAAGTGCAGTTG...........................................................................................................................................................................................................................................2211.001000010
.........CGGGCCGCAAAGTGCAGTTGGAGA.......................................................................................................................................................................................................................................2411.001000001
droGri2
AAAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAATATTCAAGCCGGAAAGGTATGAGTGTGTGT--GTCTGTGCCTGTGTGTGCGTGT---------ATGTGACTCACATGTCTGC----------------------------GTTTG-----------CTGACCATCTGTTGAGAAGATTGTAATA-GTGTTGGCTCTTT--------TTAGGCAATTGCTGATGTGATACGCACCTGCCTGGGCCCACAGGCCATGCTGAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................GAGTGTGTGT--GTCTGTGC..............................................................................................................................................................................................1830.67220
droWil2
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAATATTCAAGCCGGAAAGGTATGAGTGTGTGT----TTGCGTTTGTGT-----------------GTGTGACTCACATGTCTGG---TGTA------GC-CGCACC----GCGTTAAACATGCATTGGGTGGCCATCTGTTGACTGAT-T---TTGA-------ATTTTT--------TCAGGCTATTGCTGATGTGATACGGACATGTTTGGGCCCACAGGCCATGTTGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................GATGTGATACGGACATGT.......................1812.00200020
.........................................................................................................................................................................................................................ATTGCTGATGTGATACGGAC...........................2012.00200020
.................AAAGTGCAGTTGGAGAATATTCAAGCC............................................................................................................................................................................................................................2711.00100010
...............GCAAAGTGCAGTTGGAGA.......................................................................................................................................................................................................................................1811.00100010
........TCGGGCCGCAAAGTGCAGTTGGAG........................................................................................................................................................................................................................................2411.00101000
..................................................................................................................................................................................................................................GTGATACGGACATGTTTGGGCC................2211.00100100
.....................................................................................................................................................................................................................................ATACGGACATGTTTGGGCCC...............2011.00100010
.GAGAGAATCGGGCCGCAAAGTGC................................................................................................................................................................................................................................................2311.00100010
...GAGAATCGGGCCGCAAAGTGC................................................................................................................................................................................................................................................2111.00100010
.....................................................................................................................................................................................................................................ATACGGACATGTTTGGGCCCACAGGC.........2611.00100010
....................................................ATGAGTGTGTGT----TTGCGTTTG...........................................................................................................................................................................................2111.00100010
...................AGTGCAGTTGGAGAATATTC.................................................................................................................................................................................................................................2011.00100010
.....................TGCAGTTGGAGAATATTCAAGCCGGAAA.......................................................................................................................................................................................................................2811.00101000
....................................................................................................................................................................................................................................GATACGGACATGTTTGGGCC................2011.00100010
........................AGTTGGAGAATATTCAAGC.............................................................................................................................................................................................................................1911.00100010
...............................................................................................................................................................................................................................GATGTGATACGGACATGTTTGGGC.................2411.00100001
...............................GAATATTCAAGCCGGAAAGG.....................................................................................................................................................................................................................2011.00100010
.....GAATCGGGCCGCAAAGTGCA...............................................................................................................................................................................................................................................2011.00101000
..............................................................................................................................................................................................................................TGATGTGATACGGACATGTTTGGGCC................2611.00100010
.........................GTTGGAGAATATTCAAGC.............................................................................................................................................................................................................................1811.00100010
................................................................................................................................................................GTGGCCATCTGTTGACTGAT-T---TTGA-------AT..................................................................2711.00100010
..............CGCAAAGTGCAGTTGGAGA.......................................................................................................................................................................................................................................1911.00100010
.................................................................................................................................................................................................................................TGTGATACGGACATGTTTGGGCCCACA............2711.00101000
...............................................................................................................................................................................................................................GATGTGATACGGACATGTTTGGGCC................2511.00100010
.....................................................................................................................................................................................................................................ATACGGACATGTTTGGGCCCACAGGCCAT......2911.00110000
dp5
AACGCGAATCTGGCCGCAAAGTGCAGTTGGAGAATATTCAAGCCGGAAAGGTAAGTGTGTGCGT---------------------------------GTGTGACTCACATGGCTGTGTTTGTC------GAGAGCTCCTCG---------CCTGCATT-GGTGACCATCTGCTGACATTA-----TTGC-------TGTTTT--------CTAGGCTATTGCCGATGTCATTCGCACTTGCCTAGGACCACAGGCAATGCTGAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................CCTAGGACCACAGGCAATGCT...2111.0010100000000
.................AAAGTGCAGTTGGAGAATA....................................................................................................................................................................................................................................1911.0010000001000
............................GGAGAATATTCAAGCCGGAAAGGC....................................................................................................................................................................................................................2411.0010100000000
...............GCAAAGTGCAGTTGGAGAAT.....................................................................................................................................................................................................................................2011.0010100000000
....................................................................................................................................................................................................................................CATTCGCACTTGCCTAGGACC...............2111.0010100000000
...............................................................................................................................................................................CATTA-----TTGC-------TGTTTT--------CTAG..................................................1911.0010100000000
.....................................................................................................................................................................................................................................ATTCGCACTTGCCTAGGACCA..............2111.0010100000000
...............GCAAAGTGCAGTTGGAGA.......................................................................................................................................................................................................................................1811.0010000100000
.................................................................................................................................................................................................................................................CTAGGACCACAGGCAATGCTGA.2211.0010100000000
..................................................................................................................................................................................................................................................TAGGACCACAGGCAATGCT...1911.0010000000001
.........................GTTGGAGAATATTCAAGCCGGAAAGGCT...................................................................................................................................................................................................................2811.0010100000000
..................................................................................................................................................................................................................................GTCATTCGCACTTGCCTAGGAC................2211.0010100000000
.....................................................................................................................................................................................................................................ATTCGCACTTGCCTAGGACCAC.............2211.0010000000001
...............................GAATATTCAAGCCGGAAAGG.....................................................................................................................................................................................................................2011.0010000001000
......................................................................................................................................................................................................................................TTCGCACTTGCCTAGGACCACAGGC.........2511.0010100000000
......AATCTGGCCGCAAAGTGCAGTTGGA.........................................................................................................................................................................................................................................2511.0010100000000
.....................TGCAGTTGGAGAATATTCAAG..............................................................................................................................................................................................................................2111.0010000000010
..................................................................................................................................................................................................................................GTCATTCGCACTTGCCTAGGACCACAGG..........2811.0010100000000
.............CCGCAAAGTGCAGTTGGAGAA......................................................................................................................................................................................................................................2111.0010100000000
.....GAATCTGGCCGCAAAGTGCAGTTGGA.........................................................................................................................................................................................................................................2611.0010010000000
.................AAAGTGCAGTTGGAGAAT.....................................................................................................................................................................................................................................1811.0010100000000
droPer2
AACGCGAATCTGGCCGCAAAGTGCAGTTGGAGAATATTCAAGCCGGAAAGGTAAGTGTGTTCGT---------------------------------GTGTGACTCACATGGCTGGGTTTGTA------GAGAGCTCCTCG---------CCTGCGTT-GGTGGCCATCTGCTGACATTA-----TTGC-------TGTTTT--------CTAGGCTATTGCCGATGTGATTCGCACTTGCCTAGGACCACAGGCAATGCTGAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............CGCAAAGTGCAGTTGGAGA.......................................................................................................................................................................................................................................1912.002200000
.....................................................................................................................................................................................................................................ATTCGCACTTGCCTAGGAC................1912.002200000
.......................................................................................................................................................................................................................CTATTGCCGATGTGATTC...............................1812.002200000
.................................................................................................................................................................................................................................................CTAGGACCACAGGCAATGCTGAA2312.002200000
.................AAAGTGCAGTTGGAGAAT.....................................................................................................................................................................................................................................1811.001010000
.............CCGCAAAGTGCAGTTGGAG........................................................................................................................................................................................................................................1911.001010000
....................................................................................................................................................................................................................................GATTCGCACTTGCCTAGGACC...............2111.001010000
droAna3
AGCGCGAATCGGGCCGCAAAGTGCAGTTGGAGAACATTCAAGCCGGAAAGGTATGAGTGTGTGT---------------------------------GAGTGACTCACATGTCTGGGAGTTTAGGTT----------------TGGTA-----------GGCGACCATCTGCTGATTGGA-----AAAC-------CTTTTTGTCCTCTAACAGGCCATCGCTGATGTGATTCGCACCTGCTTGGGCCCCCAGGCCATGTTGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................AAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................1812.002020000
............................GGAGAACATTCAAGCCGGAAAGGC....................................................................................................................................................................................................................2411.001010000
...............................................................................................................................................................................................................................GATGTGATTCGCACCTGCTTG....................2111.001100000
.....................TGCAGTTGGAGAACATTCAAGCCGG..........................................................................................................................................................................................................................2511.001100000
..........GGGCCGCAAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................2511.001010000
...............GCAAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................2011.001010000
..................................................................................................................................................................................................................................GTGATTCGCACCTGCTTGG...................1911.001010000
.........................GTTGGAGAACATTCAAGCCGGAAAGGCC...................................................................................................................................................................................................................2811.001010000
.........................................................................................................................................................................................................................ATCGCTGATGTGATTCGCACCT.........................2211.001010000
......................GCAGTTGGAGAACATTCAAGCCG...........................................................................................................................................................................................................................2311.001010000
.........................................................................................................................................................................................................................ATCGCTGATGTGATTCGCACCTG........................2311.001010000
droBip1
AGCGCGAATCGGGCCGCAAAGTCCAGTTGGAGAACATTCAAGCCGGAAAGGTATGAGTGTGTGT---------------------------------GAGTGACTCACATGTCTGGGAGTTAAGGTT----------------TGCTCT-----------GCGACCATCTGCTAATTGGA-----AAAC-------CTTTTTGTCTTGAAACAGGCCATCGCTGATGTGATCCGCACCTGCTTGGGGCCCCAGGCCATGTTGAASizeHit CountTotal NormTotal
No Reads
droKik1
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTATGTGTGTGTGT--------------GT-----------------GCGTGACTCACATGTCTGGGTCTGCGGTTATCA---------------TTCT----------CCCGGCCATCTGCTCATGAGA------TTC-------CCCATT--------CCAGGCCATCGCTGATGTGATCAGGACATGTCTGGGCCCCCAGGCCATGCTGAASizeHit CountTotal NormTotal
No Reads
droFic1
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTAT-----------------------------------------------GACTCACATGTCTGGGATTTGGGAATAGGTTG---TC--CATCATTTT----------CTAGGCCATCTGCTGACTGAA-----ACC--------CATTTT--------TCAGGCCATCGCCGATGTGATACGCACCTGTCTGGGGCCTCAGGCCATGCTGAASizeHit CountTotal NormTotal
No Reads
droEle1
AGAGAGAATGGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTAT-----------------------------------------------GACTCACATGTCTGGGACTTGTGTCT-CGGGT---TT--TCGCGTTTT----------CCCGGCCATCTGCTGATCGAA-----ATCA-------CTTTTT--------CCAGGCCATCGCCGATGTGATACGCACCTGCCTGGGTCCCCAGGCCATGCTGAASizeHit CountTotal NormTotal
No Reads
droRho1
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAATATCCAAGCCGGAAAGGTAT-----------------------------------------------GACTCACATGTCTGGGACTTGGGTCTC-GGTT---TT--TCGCGTTTT----------CCCGGCCATCTGCTGATTGAA-----ACTC-------CTT-TT--------TCAGGCCATCGCCGATGTGATCCGCACCTGCCTGGGGCCTCAGGCCATGCTGAASizeHit CountTotal NormTotal
No Reads
droBia1
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTAT-----------------------------------------------GAGTCACATGTCTGGGACCTGGGTTTCGGGGT---TC--TCGTGCTCT----------ACCGGCCATCTGCTGATTAAA-----ACCC-------CTTTTT--------CCAGGCCATCGCCGATGTGATACGCACCTGCCTGGGGCCTCAGGCCATGCTGAASizeHit CountTotal NormTotal
No Reads
droTak1
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTATG-------------------------------------------CATGACTCACATGTCTGGGTTT----------------TC--TCGTGCTCC----------GCCGGCCATCTGCTGATTAAA-----ACCC-------CCTTTT--------CCAGGCCATCGCCGATGTGATACGCACCTGCCTGGGGCCCCAGGCCATGCTGAASizeHit CountTotal NormTotal
No Reads
droEug1
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATTCAAGCCGGAAAGGTAT-----------------------------------------------GACTCACATGTCTGGGATTTGGGTTTTCGAGT---TC--TCGTGTTTT-----------CTGGCCATCTGCTGACTGTA-----ACTA-------CTTTTT--------CCAGGCCATCGCCGATGTGATACGTACATGCCTGGGACCCCAGGCCATGCTGAASizeHit CountTotal NormTotal
No Reads
dm3
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTATG-------------------------------------------CGTGACTCACATGTCTGGGTCTTGGGTTTTTGTGT---TC--TCGCGTTTT-----------CCGACCATCTGTTGATTAAA-----ACGT-------CTTTTT--------CCAGGCCATCGCCGATGTGATACGCACATGTCTGGGGCCACAGGCCATGCTGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..AGAGAATCGGGCCGCAAAGTGCA...............................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......AATCGGGCCGCAAAGTGCAGTTGGA.........................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......AATCGGGCCGCAAAGTGCAGTT............................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TACGCACATGTCTGGGGCCACAGGCCA.......2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................GTCTGGGTCTTGGGTTTTTG......................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TCTGGGGCCACAGGCCATGCTG..2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGGGCCGCAAAGTGCAGTTGGAGAA......................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCAAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCAGTTGGAGAACATCCAAGCCGGA.........................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................AGAACATCCAAGCCGGAAAGG.....................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000020000000000000000000000000000
.........CGGGCCGCAAAGTGCAGTTGGA.........................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCCGCAAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAGAATCGGGCCGCAAAGTGCAGT.............................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
........TCGGGCCGCAAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000
..................................................................................................................................................................................................................CCAGGCCATCGCCGATGTGATACGCAC...........................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGGGCCGCAAAGTGCAGTTG...........................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................GTCTGGGGCCACAGGCCATG.....2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGTTGGAGAACATCCAAGCCGGAAAGG.....................................................................................................................................................................................................................2712.0020000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................GCCATCGCCGATGTGATA................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAGTTGGAGAACATCCAAGCCGGAAAG......................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGAATCGGGCCGCAAAGTGCAGTTGGA.........................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ACATGTCTGGGTCTTGGGTTT.........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTATG-------------------------------------------CGTGACTCACATGTCTGGGT..................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGAATCGGGCCGCAAAGTGCAGTTGG..........................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAGAATCGGGCCGCAAAGT..................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GGGCCGCAAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCAAAGTGCAGTTGGAGAACAT...................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................GATACGCACATGTCTGGGGCCACAGGC.........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GAGAGAATCGGGCCGCAAAGTGCAGT.............................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....GAATCGGGCCGCAAAGTGCAGTTGGA.........................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GAATCGGGCCGCAAAGTGCA...............................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ATCGCCGATGTGATACGCAC...........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AATCGGGCCGCAAAGTGCA...............................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGAACATCCAAGCCGGAAAGGCC...................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...........GGCCGCAAAGTGCAGTTGGAGAA......................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GAGAGAATCGGGCCGCAAAGTGCAG..............................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TCCAAGCCGGAAAGGTATG-------------------------------------------CGTG..................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................G-------------------------------------------CGTGACTCACATGTCTG.....................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................ATG-------------------------------------------CGTGACTCACATGTCTGG....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAGAACATCCAAGCCGGAAAGGC....................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.....GAATCGGGCCGCAAAGTGCAGTTGG..........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CAAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........GGCCGCAAAGTGCAGTTG...........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAGTGCAGTTGGAGAACATCT.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..AGAGAATCGGGCCGCAAAGTGCAGTTGG..........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAGAACATCCAAGCCGGAAAGG.....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........CGGGCCGCAAAGTGCAGTT............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGAGAGAATCGGGCCGCAAAGTGCC...............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................ATGTGATACGCACATGTCTGG...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................GTATG-------------------------------------------CGTGACTCACATGTCTGGGA..................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................ATGTCTGGGTCTTGGGTTTTTGTG....................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ACATCCAAGCCGGAAAGGTA...................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........TCGGGCCGCAAAGTGCAGTTGGAA........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................T-------CTTTTT--------CCAGGCCATCGCCG........................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CACATGTCTGGGTCTTGGG............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................CCATCGCCGATGTGATACGCACA..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................TTGATTAAA-----ACGT-------CTTTTT--------CCAG..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................AAGTGCAGTTGGAGAACATCCAAGCCGGAA........................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGGGCCGCAAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GGTCTTGGGTTTTTGTGT---T...............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCAAAGTGCAGTTGGAGAACA....................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........TCGGGCCGCAAAGTGCAGTTG...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAGAATCGGGCCGCAAAGTGCC...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GGTCTTGGGTTTTTGTGC---................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGAATCGGGCCGCAAAGTGCAGTT............................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGAGAATCGGGCCGCAAAG...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAGTGCAGTTGGAGAACATC..................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAGAATCGGGCCGCAAAGTGCAGTT............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TGATTAAA-----ACGT-------CTTTTT--------CCAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................ATACGCACATGTCTGGGGC................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GAGAGAATCGGGCCGCAAAGTGC................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAGTGCAGTTGGAGAACA....................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AATCGGGCCGCAAAGTGCAGT.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................ATCTGTTGATTAAA-----ACGT-------CTT.................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....GAATCGGGCCGCAAAGTGCAGTTG...........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ATCGCCGATGTGATACGCACATGTCT.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CAAAGTGCAGTTGGAGAACAT...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................TACGCACATGTCTGGGGCCACAGGCCAT......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCAAAGTGCAGTTGGAGAA......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAAGTGCAGTTGGAGAACATC..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....AGAATCGGGCCGCAAAGTGCAGT.............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGTGCAGTTGGAGAACATCCAAGCCGG..........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAGAATCGGGCCGCAAAGTGCAGTTGG..........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TCGGGCCGCAAAGTGCAGTTGG..........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAGTGCAGTTGGAGAACAT...................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......ATCGGGCCGCAAAGTGCAGTTGG..........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ATCGGGCCGCAAAGTGCAGTTG...........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................TCGCGTTTT-----------CCGACCATCTGT............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................AGTGCAGTTGGAGAACATC..................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................ATCGCCGATGTGATACGCACAT.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................ATACGCACATGTCTGGGG.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
....AGAATCGGGCCGCAAAGTGCAGTTGGAG........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGTTGGAGAACATCCAAGT.............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
......AATCGGGCCGCAAAGTGCAGTTGG..........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GATACGCACATGTCTGGGGCCACAG...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TCTGGGGCCACAGGCCATGCTGA.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GTGATACGCACATGTCTGGGG.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AACATCCAAGCCGGAAAGGCC...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................CATGTCTGGGGCCACAGGC.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAAGTGCAGTTGGAGAA......................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ATCGGGCCGCAAAGTGCAGTTGGAG........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ACATGTCTGGGTCTTGGGTTTTTGTG....................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGCCGCAAAGTGCAGTTGGAGAACA....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................ACATCCAAGCCGGAAAGGTATG-------------------------------------------CGTGAC................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CGATGTGATACGCACATGTCT.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GAATCGGGCCGCAAAGTGCAGTTGGAG........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGAATCGGGCCGCAAAGTG.................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................................................................................................................................................ATGTCTGGGGCCACAGGC.........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GTTGATTAAA-----ACGT-------CTTTTT--------CCAG..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TACGCACATGTCTGGGGCCACAGGC.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AACATCCAAGCCGGAAAGG.....................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................AAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTATG-------------------------------------------CGTGACTCACATG.........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.........CGGGCCGCAAAGTGCAGT.............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GTTGGAGAACATCCAAGCCGGAA........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAGAATCGGGCCGCAAAGTGCA...............................................................................................................................................................................................................................................2211.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGAGAGAATCGGGCCGCAAAGTGCA...............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................ACATGTCTGGGGCCACAGGC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCAGTTGGAGAACATCCAAGCCG...........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTGCAGTTGGAGAACATCCAAGCCG...........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CATGTCTGGGTCTTGGGT...........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................ATGTGATACGCACATGTCTGGGGC................2411.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TT--------CCAGGCCATCGCCGATGTGA..................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCAAAGTGCAGTTGGAGAACA....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................................................................ACATGTCTGGGTCTTGGGTTTT........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................GACCATCTGTTGATTAAA-----ACGT-------....................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................TGGAGAACATCCAAGCCGGAAA.......................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................GATGTGATACGCACATGTCTGGG..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGAGAATCGGGCCGCAAAGTGCAGT.............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................GAACATCCAAGCCGGAAAGGCC...................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGAATCGGGCCGCAAAGTGCAGTTG...........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGGAGAACATCCAAGCCGGAAAGG.....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TGATACGCACATGTCTGGGGCCA..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TCCAAGCCGGAAAGGTATG-------------------------------------------CGT...................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TCCAAGCCGGAAAGGTATG-------------------------------------------CGTT..................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TCCAAGCCGGAAAGGTATG-------------------------------------------C.....................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................GTCTTGGGTTTTTGTGC---................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AAGCCGGAAAGGTATG-------------------------------------------CG....................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................CCAAGCCGGAAAGGTATG-------------------------------------------CG....................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CAAGCCGGAAAGGTATG-------------------------------------------CGT...................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droSim2
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTATG-------------------------------------------CGTGACTCACATGTCTGGGTCTTGGGTTATTGTGT---TC--TCGCGTTTT-----------CTGACCATCTGCTGATTGAA-----ACGC-------CTTTTT--------CCAGGCCATCGCTGATGTGATACGCACATGTCTGGGGCCCCAGGCCATGTTGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................CATCTGCTGATTGAA-----ACGC-------CT..................................................................2112.00210100000000000000
.....................TGCAGTTGGAGAACATCCAAGCCGGAAA.......................................................................................................................................................................................................................2812.00200000001010000000
.................AAAGTGCAGTTGGAGAACATC..................................................................................................................................................................................................................................2112.00210001000000000000
......AATCGGGCCGCAAAGTGCAGT.............................................................................................................................................................................................................................................2111.00100100000000000000
.......................CAGTTGGAGAACATCCAAGCCGGAAA.......................................................................................................................................................................................................................2611.00100001000000000000
.....................................................................................................................................................................................................................................ATACGCACATGTCTGG...................1611.00100000001000000000
.....................................................................................................................................................................................................................................ATACGCACATGTCTGGGGC................1911.00110000000000000000
.............CCGCAAAGTGCAGTTGGAGA.......................................................................................................................................................................................................................................2011.00100010000000000000
.....................TGCAGTTGGAGAACATCCAAGCCGGAA........................................................................................................................................................................................................................2711.00100000000100000000
.............................................................................................................................................................................GATTGAA-----ACGC-------CTTTTT--------CCAG..................................................2111.00100010000000000000
...................................ATCCAAGCCGGAAAGG.....................................................................................................................................................................................................................1611.00100000000001000000
...............GCAAAGTGCAGTTGGAGAA......................................................................................................................................................................................................................................1911.00100000010000000000
..............CGCAAAGTGCAGTTGGAGAACATCCA................................................................................................................................................................................................................................2611.00100000010000000000
.....................TGCAGTTGGAGAACATCCAAGCCGGA.........................................................................................................................................................................................................................2611.00100000000100000000
.....GAATCGGGCCGCAAAGTGCAGTTG...........................................................................................................................................................................................................................................2411.00100010000000000000
............GCCGCAAAGTGCAGTTGGAGA.......................................................................................................................................................................................................................................2111.00100000000000100000
...............GCAAAGTGCAGTTGGG.........................................................................................................................................................................................................................................16100.10100000000001000000
droSec2
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATCCAAGCCGGAAAGGTATG-------------------------------------------CGTGACTCACATGTCTGGGTCTTGGGTTATTGTGT---TC--TCGCGTTTT-----------CTGACCATCTGCTGATTGAA-----ACGC-------CTTTTT--------CCAGGCCATCGCTGATGTGATACGCACATGTCTGGGGCCCCAGGCCATGCTGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................GTGATACGCACATGTCTGG...................1911.0010010
...................AGTGCAGTTGGAGAACAT...................................................................................................................................................................................................................................1811.0010010
.....................................................................................................................................................................................................................................ATACGCACATGTCTGGGGCCCCAGG..........2511.0010010
...............GCAAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................2011.0010010
.................AAAGTGCAGTTGGAGAACAT...................................................................................................................................................................................................................................2011.0010100
...............GCAAAGTGCAGTTGGAGAACAT...................................................................................................................................................................................................................................2211.0010010
.................................ACATCCAAGCCGGAAAGGTATG-------------------------------------------CGT...................................................................................................................................................................2511.0010001
..............................................................................................................GTCTGGGTCTTGGGTTATTGTGT---TC--T...........................................................................................................................2611.0010100
droYak3
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATTCAAGCCGGAAAGGTATG-------------------------------------------CGTGACTCACATGTCTGGGTCTTGGGTTTTCGTGT---TC--TCGCGTTTT-----------CCGACCATCTGCTGATTGAA-----ACGC-------CTTTTT--------TCAGGCCATCGCCGATGTGATACGCACATGCCTGGGGCCCCAGGCCATGCTGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........CGGGCCGCAAAGTGCAGTTGGAGAACATT..................................................................................................................................................................................................................................29117.0017000000000017
............GCCGCAAAGTGCAGTTGGAG........................................................................................................................................................................................................................................2011.00101000000000
.........................GTTGGAGAACATTCAAGCCGGAAAGGCC...................................................................................................................................................................................................................2811.00100100000000
...............................GAACATTCAAGCCGGAAAGGCC...................................................................................................................................................................................................................2211.00100000010000
.................................................................................................................................................................................................................................TGTGATACGCACATGCCTGG...................2011.00101000000000
...............GCAAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................2011.00100000010000
.....GAATCGGGCCGCAAAGTGCAGTTG...........................................................................................................................................................................................................................................2411.00101000000000
.......ATCGGGCCGCAAAGTGCAGTTGGAG........................................................................................................................................................................................................................................2511.00101000000000
..............................AGAACATTCAAGCCGGAAAGGC....................................................................................................................................................................................................................2211.00100000010000
...........................................................................................................................................................................................................................CGCCGATGTGATACGCACATGCCT.....................2411.00101000000000
.......ATCGGGCCGCAAAGTGCAGTTGGA.........................................................................................................................................................................................................................................2411.00100000010000
.........CGGGCCGCAAAGTGCAGTTGGAG........................................................................................................................................................................................................................................2311.00100000010000
droEre2
AGAGAGAATCGGGCCGCAAAGTGCAGTTGGAGAACATTCAAGCCGGAAAGGTATG-------------------------------------------CGTGACTCACATGTCTGGGTCTTGGGTTTTTGTGT---TC--TCGCCTTTT-----------CCGACCATCTGCTGATTTAA-----ACGG-------CTTTTT--------CCAGGCCATCGCCGATGTGATACGCACATGCCTGGGGCCCCAGGCCATGCTGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......ATCGGGCCGCAAAGTGCAGTTGGA.........................................................................................................................................................................................................................................2411.0010000100
.........................GTTGGAGAACATTCAAGCCGGAAAGGC....................................................................................................................................................................................................................2711.0010100000
..................................................................................................................................................................................................................................GTGATACGCACATGCCTGGGGCCC..............2411.0011000000
...............GCAAAGTGCAGTTGGAGAACATTCA................................................................................................................................................................................................................................2511.0010000100
...............................GAACATTCAAGCCGGAAAGGCC...................................................................................................................................................................................................................2211.0010000010
...GAGAATCGGGCCGCAAAGTGCA...............................................................................................................................................................................................................................................2211.0010000100
....................GTGCAGTTGGAGAACATTCA................................................................................................................................................................................................................................2011.0010000100
...............GCAAAGTGCAGTTGGAGAAC.....................................................................................................................................................................................................................................2011.0011000000
..............CGCAAAGTGCAGTTGGAGAACAT...................................................................................................................................................................................................................................2311.0010000100
.........................................................................................................................................................................................................................ATCGCCGATGTGATACGC.............................1811.0011000000
...GAGAATCGGGCCGCAAAGTGCAGTTGGA.........................................................................................................................................................................................................................................2811.0010000100
....................................................................................................................................................................................................................................GATACGCACATGCCTGGGGC................2011.0010001000
...............................GAACATTCAAGCCGGAAAGGC....................................................................................................................................................................................................................2111.0010100000
........TCGGGCCGCAAAGTGCAGTTGGAGA.......................................................................................................................................................................................................................................2511.0011000000
.................AAAGTGCAGTTGGAGAACATT..................................................................................................................................................................................................................................2111.0010000100

Generated: 05/19/2015 at 07:35 PM