ID:

dvi_15511

 Coordinate:

scaffold_13047:4149958-4150108 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.2 -18.9 -18.7

Flybase annnotation

exon [dvir_GLEANR_8731:2]; CDS [Dvir\GJ23376-cds]; intron [Dvir\GJ23376-in]

Repeatable elements

NameClassFamilyStrand
(CTG)nSimple_repeatSimple_repeat+
(TTG)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTAAGCGTCGCGAGTGAAAGTGTTGACAACAAAATCAAAAGTGAAACAAACGAGCAAGAACAAACAGCAGCAGCAACGGCAACGGCAACGGCTACGGCACCAGCAACAGCAACAGCAACAACAACAACCGCAACATCCGAATTGCCGCTACATTATCGTGGCCTAAACAACTCGGTGATTATAGCCAACTATGCGCATCAGCATCAGCAGCAGCAGCAGCAGCAGCATCAGCAGCAACAGGCAGAGCAAGA
***************************************************************************.(((...((....))(((...((....))...))).................)))...((.((((.(((..(((((......))))).....))).))))))..************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060667
160_females_carcasses_total
 SRR1106730
embryo_16-30h
 SRR060659
Argentina_testes_total
 SRR060681
Argx9_testes_total
 SRR060674
9x140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060656
9x160_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060657
140_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 V047
embryo
...............................................................................................................................................................GGCCTAAACAACTCGGTGAT........................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................ACGGCAACGGCAACGGCTACGGCACC...................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TAGCATCAGCAGCAACTGGTAGA...... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AACCGCAACATCCGAATTGCC......................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAGCATCAGC................... 26 0 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAGCATCA..................... 24 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAGCATCAG.................... 25 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCAGCATCAGCA.................. 28 0 16 0.19 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCATC...................... 20 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCAGCATCAGC................... 27 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCAGCAACGGCAACGGCAACGG................................................................................................................................................................ 22 0 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAGCATCAGCA.................. 27 0 18 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TTATCGTGGCCTAATCAAAAC.............................................................................. 21 3 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCATCAGCA.................. 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCATCAG.................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCAGCAACGGCAACGGCAACG................................................................................................................................................................. 21 0 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................GCAGCAACGGCAACGGCCACG................................................................................................................................................................. 21 1 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................CAGCAGCAACGGCAACGGCAA................................................................................................................................................................... 21 0 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCGTCAGCAGCAA.............. 28 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...AGCGATGCGAGTGAATGTGT.................................................................................................................................................................................................................................... 20 3 19 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................ATCAGCATCAGCAGCAGCAGCAG................................ 23 0 19 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................CAGCAACAGCAACAACAAC.............................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................ATCAGCAGCAGCAGCAGCAGCA........................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCAGCATCAG.................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GCAGCAGCAGCAGCATCAGC................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................CAGCAGCAGCAGCAGCAGCATCAGCA.................. 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TCAGCATCAGCAGCAGCAGCC................................. 21 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGCAGCAGCATCAGCAGCA............... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CATCAGCATCAGCAGCAGCAG................................... 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................CAACGGCAACGGCAACGGC............................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............GAAACTGTTGACAACAAG.......................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

GATTCGCAGCGCTCACTTTCACAACTGTTGTTTTAGTTTTCACTTTGTTTGCTCGTTCTTGTTTGTCGTCGTCGTTGCCGTTGCCGTTGCCGATGCCGTGGTCGTTGTCGTTGTCGTTGTTGTTGTTGGCGTTGTAGGCTTAACGGCGATGTAATAGCACCGGATTTGTTGAGCCACTAATATCGGTTGATACGCGTAGTCGTAGTCGTCGTCGTCGTCGTCGTCGTAGTCGTCGTTGTCCGTCTCGTTCT
************************************************************************.(((...((....))(((...((....))...))).................)))...((.((((.(((..(((((......))))).....))).))))))..*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060685
9xArg_0-2h_embryos_total
 SRR060679
140x9_testes_total
 V053
head
 SRR060656
9x160_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 M027
male body		 SRR060687
9_0-2h_embryos_total
.............................................................................................TGCCGTGGTCATTGTGGTTG.......................................................................................................................................... 20 2 5 0.20 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................GGCGCTGTAGGCTCACCGG......................................................................................................... 19 3 19 0.11 2 0 0 0 0 0 1 1 0 0
...........................TTGTTTTAGTTATCACATGGT........................................................................................................................................................................................................... 21 3 11 0.09 1 0 0 1 0 0 0 0 0 0
.......................ACTGTTGTTTTAGTGATC.................................................................................................................................................................................................................. 18 2 12 0.08 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................TTATTTTTGGCGTGGTAGGC................................................................................................................ 20 3 14 0.07 1 0 0 0 0 1 0 0 0 0
.......................................................................................................GTTGTCGTTGTCGTTGTTGTTG.............................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GTCGTCGTCGTAGTCGTCGTT.............. 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0
......................................................................GTCGTTGCCGTTGCCGTTG.................................................................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 1 0
.....................................................................CATCGTTGCCGTTGCAGTTTC................................................................................................................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:4149908-4150158 - dvi_15511 CTAAGCGTC-G--CGAGTGAAAGTG----------------------------------------TTGACAACAAAATCAAAAGTGAAACAAACGAGCAAGAACAAA-------------------------------------C------------------------------------------AGC---------------------AGCA---------------------------------------GCAA--------------------------------------------------------------CGG---------------------------CA------------ACGGCAA---CGGCTACGG---CACCAGCAACAGCA---------ACAGCAACAA------------------------------------------------------CA------------ACAA------------------CC---GCAA------------CATCCGAATTGCC------------------------------------------GCTACATTATCG--TGGCC-TA-----------------------------------------AACAAC--------------------TCGGTGA--------------------TTATAGCCAACTATGCGCATC----AGCATC---AGCAG--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCAGCAGCAACAGG---CAG----------------AGCAAG-A
droMoj3 scaffold_6540:21135167-21135372 - CAAAGCGAC-G--CAAGTGAAAGTG----------------------------------------TTGACAACAAAATCAAAAGTGAATCAAATGAGCAAGAACAAA-------------------------------------C------------------------------------------TGC---------------------AACA---------------------------------------GCAA--------------------------------------------------------------CAT------------------------------------------------------------------------------------TGACAACAGCA------------------------------------------------------------------------------------------------GCAA------------CTGCCGAATTGCC------------------------------------------GCTACATTATCG--CGGCC-TA-----------------------------------------AACAAC--------------------TCGGTGA--------------------TCATAGCTAACTATGCTC----------ATC---AGCAGCA--------------------------------------------------------------------------------------------ACAGCAACAGCAACAGCAACAACAACAAG---CAG----------------AGCAAC-A
droGri2 scaffold_14906:790587-790783 - CAAAGCGAC-G--CGAGTGAAAGTG----------------------------------------TTGACAACAAAATCAAAAGTGAAACAAACGTGCAAGAACAAA-------------------------------------C------------------------------------------TAC---------------------GACT---------------------------------------GCAA--------------------------------------------------------------CTG------------------------------------------------------------------------------------CGACAGCAGCAA------------------------------------------------------------------------------------------------CAA------------CAGTTGAATTGCC------------------------------------------GTTGCATTATCG--GGGCT-TA-----------------------------------------AACAAT--------------------TCGGTGA--------------------TTATAGCCAACTATGCAC----------ATC---AGCAGCAG-----------------------------------------------------------------------------------------------CA---ACAAGCA---GAACAACAAC---AGC----------------AGCAGC-A
droWil2 scf2_1100000011288:730-968 + CAACAG--CAGCAA---C-------------------------------AATGGCAGCAACAACA------ACAGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTGCAGC----AG----------CAACAACAACAGCAGCAACAACAACAGCAGCAGCA-----ACAACAGCATCAGCAACA---G------CAA---------------CA---------------GCAGCAACGA---ATG------------CAACAGCAACAGCAACAG------------------------------------------------------------------------------------------------CAGCAACAATTGCAGCAACAA---------------------C---------------------------------------------------------------------------------------------------------AACAACAG----------------------CAAC-AACAA-------------------------CGACAGCAGCAACAACAA--------------------------------------------------------------------------------------------CAGCAGCAGCAACAACAGCAACAACAACAGC---AGC----------------AGCAAC-A
dp5 2:6797208-6797431 + CAATAT--ATGCAA---C-------------------------------AGCAACATATGCA---------ACAGC-------------------------------AA-AATA----------------------------------------------------------TG-------------------------------------------------------------------CAGCAGC-----------------AACATCTGCAACAGCAACATCTGCAGCAGCAACA-----GCAGAAGCAGCAGCAACA---G---------------------AAGCAGC---------------AG------------------------CAACAGCAGCAGCAACAG------------------------------------------------------------------------------------------------CAGCAGCAACAACAGAAGCAG---------------------C---------------------------------------------------------------------------------------------------------AGCAACAG----------------------CAGC-AGCAG-------------------------AAGCAGCCGC---AGCAGCAG-----------------------------------------------------------------------------------------CAGGTGCAGCAGCAACATCAGCAGCAGCAGG---TAC----------------AGCAGC-A
droPer2 scaffold_5:843856-844098 - CCCAGC--C-G--CAACCGCCAGTG----------------------------------------GCAACAACACAAC-----------------------------AA-CAG-----------------------------------------------------------------------------------------------------------------------------------CAGC--------AA--------------------------------------------------------------------CAACAAGTGCAGCAGCAGCACCAACAGCAGCAGCAGCAACAACAA---CAGCAGCAG---CAACAACAACA---------------------G-----------------------------CAA----------CAACAGCAGCAACA------------GCAATCGCTCAATGA---------------------------------------------------CCAACTGCAGCATTCCA-------------------------------------TCAA------------------CGATATAGTGGGAGG------------------------------------------------------------------------------AGGCGGTGGC---AGCTCTGGAGGAAGCAG--------------------------------------------------------------------------------CAGCAGCAAC-----------CAACAGCAGCAACAGCCCCAA-----------ATCTCG-G
droAna3 scaffold_13117:5219534-5219786 - CCCAGCAAC-A--GCAGC-------------------------------AGCATCAAGCACA---------ACAAC-------------------------------AA-CATC----------------------------------------------------------AGCAGCAGCAGCAAT---CA-CAACAACAT---------------------------------------------A----AG----------CAGCAA---------------CAGCAGCAGCACCA-----GCAGCAGCAACATCTTCA------------G------------CAGAAG---------------CAG---CAA------------------------------------------------------------------------------------CAGCAGCAGCAACA---------TCAACCA------------ACACAGCAGCAGCAATCGCAGGCACAT---------------------C------------------------------------------------------------------------------------------------AGCAAC--------------------TCCAGGCT--CATCAGC-AGCAA-------------------------CATCTCCATC---AGCAACAG-----------------------------------------------------------------------------------------CAGCAGCAACACCACCATCAGCAGCAGCAGC---AAC----------------AGCAAC-A
droBip1 scf7180000395973:374082-374335 + CCAAGCGCC-G--CAACAGGTTGTA----------------------------------------CCGCCAGTGGCTGCCCAGGTGCAACCTCCGCAGCAGCAACAA-------------------------------------C------------------------------------------AGC---------------------AGCA---------------------------------------GCAA--------------------------------------------------------------CAG---------------------------CA------------ACAACAA---CAGCAGCAG---CAGCAACAACACC---------------------------------------------------------------AACAGCAGCAACA------------ACAATCGCTGAACGA---------------------------------------------------TCAGCTGCAGCACTCCA-------------------------------------TCAA------------------CGACATTGTTGGGGGAGGAAGCAGT--------------------TCGGGAA--------------------CCACGACC--------------------------A------------GCAGCCAGAGCA----------------------------------------------------------------------GTCAGCAGCAGCAGCAACTGCAGCAGAGCCTGC----CG----------------AGCATG-C
droKik1 scf7180000302809:339216-339484 - CATCAC--CATC-ACAGTCACAGTC------------------------AACTCCAACATCA---------ACACC-------------------------------AA-CA-------------------------------------------------------------A---CAACAGTTAC---AA-CAACAACAGGACCCACAC------------------------------CAACAACAGCC--GCTACACCAA--------------------------------------------------------------------------------------CA---------------GCAG---CAG---CTGCAGCAT---------------------------CAACA---G------------------------------------------------------------------------------------CAACACCAACAACACTACCAA------------CAACATGCCATCCAACACCAACAGGCTAACAAAATCTCATATCGTGGCATTTTCA--CCACCACA--GGCAACGCCATGAACGCAGC----------------------------------------------------------------------------------------------------AGC---AG---CC--------------------------------------------------------------------------------------------GCCGCAGCAGCTGC-CCAGCAGCAGCAGC---AAC----------------AGCAGC-A
droFic1 scf7180000454050:456352-456595 - CAGCAC--CAC---CAGC-------------------------------AACACCAGCAGCA---------ACAGC-------------------------------AG-CAGC----------------------------------------------------------------------------AGC------------------AGCACCACCTGCAACACCAGCAGCTGCAGC----------A--GCAG--------------------------------------------------------------CAG---------------------------CA------------ACACCAA---CAGCAGCAG---CACCACCACCACCA---CCAGCAACA------------------------------------------------C------------CAGCAGCTGCACCAC------------GATCCGCAGCAGCAGCATCCGCAGTACCAC---------------------GCCC--------------A-------------------------------------C-------------------------------------------------------------------------------CAGC-TGCA------------CGCCCACGCG----CTGCCGCACC---AGCAGCAG--------------------------------------------------------------------------------------------CAGCAGCAACAGCAGCAACAGCAGCAGC---AAC----------------AACA-G-C
droEle1 scf7180000490214:1311425-1311659 - CAAACAGTG-G--CTGGAAAAACAG----------------------------------------CTGAAAAAAGC---------------------------------------------------------------------------AACAAAAAAATGGGGAAAAAT------------------AA-------------------------------------------------CAGCAACAAAT--GGCAAACAAC--------------------------------------------------------------------------------------CA---------------GCAG---CAG---CAGCAGCAG---------------------------TAGCAACAACA------------------------------------------------------------AAAA--------------------------A------------CAAACAAATT-TC------------------------------------------AATTCGTTAGCGCCCGGCC-TATTGTAGATGTTGCTGTTGTAGC---------------------------------------------------------------------------------------TGC----AACAGCAAC---AC--------------------------------------------------------------------------------------------------GAGCAGCAGCAGCAGCAACAGCAGCACCAACAGCAACAAATTGCGGCAGAGT---GAG
droRho1 scf7180000780277:36802-37046 - TTCGCG-TC-GCAG---C-------------------------------AGCGCCAGCAACAACA------ATA----------------------------------AATAGCAAAAACTGAGCAGCGTTCGGCAAAGCGCAGCAACAGCAACAAAGGCAACACTTAAAATAA-------------------------------------------------------------------CAGCAAC---A--GAAACGCCAA--------------------------------------------------------------------------------------TT---------------G---------------------------TCACAGCAACTGCAACAGCAGCAACAAC---A------------ACCAAGAGGCGACAAGCGG--TCAACAGTAGCAACA------------ACAA--------------------------------------------------------------------------------------------------------------------------GCGCTGCAGTCGCAGC----------------------------------------------------------------------------------------------------AGC---AG--------------------------------------------------------------------------------------------------CAGCAGCAGCAGCTGCAGTAGCAGCAGC---AGC----------------AGCAAC-G
droBia1 scf7180000302113:637629-637839 + CCAAGCGC--G--CAAGCAGAAGAT----------------------------------------AATCATACAAAACCAGATGATACTCAAT--GCCAGTCAC------CA-------------------------------GCAGCAGC------------------------------------AGC---------------------AGCA---------------------------------------GCAA--------------------------------------------------------------------CATCCTCCTCAGCAGCAACACCAGCAGCAGCAGCAGCAACAGCAA---CAG------------------------------------------------------------------------------------------------------------------------------------CAGCAGCATGTG--------------------------------------------------------------------------------GCC-C-------AT-------------------------GGGAAGAAG------------------------------------------------------GCAGCCAGAAA---ACACC-------AGC---A------------ACACCTACAGCA----------------------------------------------------------------------G-CAACAGCAGCAGCAGC------------------AGC----------------AG---CAG
droTak1 scf7180000415862:231873-232133 - AG---CGCG-G--CGGAAGACAGCG----------------------------------------GCAATTTCAAAACC----------------------------AA-CA-------------------------------------------------------------G------------------------------------------------------------CCACAGC----------A--ACAG--------------------------------------------------------------CAGCAACATCAAGCA-------------------------------------------AT------------------------------------------------CAACAGCAAC------TCGGCAATCAGCGGAATCAACAGCAGCAATA------------G------------AATCGTAGATAGCAGCAACTACAATAAAAT---------------------GACCAAAAATAGCTT---------------------------------------------------------------------------TAGAGGTAGCATG---------AGATTTACCACACCAAGTACCAATCCTCAATCG---------------TCATACTCATC----ATC-AC---AGCAGCA--------------------------------------------------------------------------------------------GCAGCAGCAACAGCAACAGCAGCAACATC---AGA-----------------ACCAG-A
droEug1 scf7180000409538:185176-185401 + CTGAGCAGC-G--TTCGGCAAAGCG----------------------------------------CAG----------------------------------------------------------------------------CAACAGCAACAAAAGCAACACTAAAACTAA-------------------------------------------------------------------CAGCAGC---A--GCAAAACCAA-----------------------------------------------------------------------------------------------------TTGCAA---CTGCAGCAG---TAA---------------------------CAACA---ACAACAACAGCAACATCCAAACGGCGACAAGCGG--TCAACAGCAGCAACA------------GCAA--------------------------------------------------------------------------------------------------------------------------ACGCTGCAGTCGCAGT---------------------------------------------------------------------------------------CG-------------C---AGCAGCAG---CAGCAGCTGCAGTA-----------------------------------------------------------------------------GCAGCAGCAGCAGCAGCAACGCTAGC---GTC----------------GGCAGC-G
dm3 chrX:9379345-9379568 + CAAAACGCA------ATTAGTAGCA----------------------------------------GTAACAACGCCA---------------------------------------------------------------------------------GCAACACTTACAACAG---CAACAG-----GCAGC------------------AGCAACAACTGCAACTGCAG----------CAACTGCAACT--GCAA--------------------------------------------------------------CAG---------CAA---------------CA---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGCAA---CAGCAACTGCAACTGCAACTGCAGCAGCAACACGACTAGCATCAGCAACATATGTGCACAAGAGCAACATCAGCAGCTTGAGATGA------------------------AAGCGGC---AAG----------------AG---CAA
droSim2 x:11980800-11981022 - CAGCAG--CAGC---AGC-------------------------------AACAGCAACAACA---------ACACT-------------------------------AG-CAAC----------------------------------------------------------AA------------T---AA-------------------------------------------------CAACAAT----AG----------CAGCAACAGCGGCAGCAACAGCAGCAGCAACAACACACCA--AACGGTGC--G---------------------------------------------------CAG---CAG------------------------------------------------------------------------------------CAGCAGCAGCAACA------------ACAC--------------------------------------------------------------------------------------------------------------------------CATCAGCAGCAGCAGC----------------------AGCAGCA-----------------------T--CATCAGC-AGCAACGTGTTGTTGCCAGCAGCAA---CC-------AGC---AACAGCAG-----------------------------------------------------------------------------------------CAACAGCAGCTGCAGC---------AACAGC---AGC----------------AG---CAG
droSec2 scaffold_14:1549904-1550148 + CTGCACCTC-G--CCCCCCGACGTGGTGCCCCGAGCAGCCAATTTCCATA---------------ATAGCAACACCA---------------------------------------------------------------------------------TCAGTACTGGCCGCAA------------T---GAC------------------AACA---------------------------------------GCAA------CAGCCA-----------------------------------------------------------------------------------------------CGGCAG---CAGCAGCAG---CAG---------------------------CAGCAAC---A------------------CA---------------A------------------------CC---------------AGCAGCA---GCAA--------------------------------------------------------------------------CATCGCCCAGC--AGCAGCAGGCGCCGCTG------------------GCTG------------------------------------------------------------------------------CGATGACAGC---AGCGCTGGGAGATGCAACTTCAGCA----------------------------------------------------------------------G-CAACAGCAGCAGCCGCATCAGC------------------CAGTGGCATCGTTGTCGAG-A
droYak3 X:19081546-19081778 - CAAAGCGCA-G--CAACAG--------------------------------------------------C---------------------------------------------------------------------------------AACAAAGGCAACACTAAAACTAA-------------------------------------------------------------------CAGCAGC--------GACACCAA------TTGCTACTGCAACACCAGCAGCAGAAACA--------------------------------------------------------------------------------------------------------------------------------------------ACCAAGCGGCGGCAA---G--TCAGCAGCAGCAACA---------ACAAC---------------AACAGCAGCAGCAATCACAAGAACAA---------------------AA--------------------------------------------------------GCAAGCGCTGCAGTCGCAGT---------------------------------------------------------------------------------------CG----CAGTCGCAGC---AGCAGCAG---CAGCAGCTGCAGTA----------------------------------------------------------------------G-CAGCAGCAGCAGCAGC---------AGCAGC---AAC----------------GC---TAG
droEre2 scaffold_4690:5954381-5954604 + CAACAG--CAGCAG---C-------------------------------AACAGCAGCAGCA---------ACAAC-------------------------------AG-CAGC--------------------------------------------------------------------------------------------------------------------------------TGCAGC----AG----------CAGCAACAACAGCAGCTACAGCAGCAGCAACAACA-----GCAGCTGCAGCAGCAGCA---A---------------------CAACAGC---------------AG------------------------CTGCAGCAGCAACAACTG------------------------------------------------------------------------------------------------CAGCAGCAACTGCAACAACAG---------------------C---------------------------------------------------------------------------------------------------------AGCTGCAA----------------------CTGC-AACAG-------------------------CAGCTGCAAC---TGCAACAG-----------------------------------------------------------------------------------------CAGCTGCAACTGCAACAGCAGCAGCAGCAAC---AAC----------------AGCAGG-T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTAAGCGTC-G--CGAGTGAAAGTG----------------------------------------TTGACAACAAAATCAAAAGTGAAACAAACGAGCAAGAACAAA-------------------------------------C------------------------------------------AGC---------------------AGCA---------------------------------------GCAA--------------------------------------------------------------CGG---------------------------CA------------ACGGCAA---CGGCTACGG---CACCAGCAACAGCA---------ACAGCAACAA------------------------------------------------------CA------------ACAA------------------CC---GCAA------------CATCCGAATTGCC------------------------------------------GCTACATTATCG--TGGCC-TA-----------------------------------------AACAAC--------------------TCGGTGA--------------------TTATAGCCAACTATGCGCATC----AGCATC---AGCAG--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCAGCAGCAACAGG---CAG----------------AGCAAG-ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCC-TA-----------------------------------------AACAAC--------------------TCGGTGA--------------------T...............................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................A--------------------------------------------------------------CGG---------------------------CA------------ACGGCAA---CGGCTACGG---CACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------CC---GCAA------------CATCCGAATTGCC------------------------------------------....................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCAGC.......................................26200.408008000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCA.........................................24200.255005000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCAG........................................25200.204004000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCAGCA......................................28160.193003000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATC..........................................20200.153003000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCAGC.......................................27200.153003000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GCA---------------------------------------GCAA--------------------------------------------------------------CGG---------------------------CA------------ACGGCAA---CGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.141000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCAGCA......................................27180.112002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCAGCA......................................24200.102002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCAG........................................22200.102002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GCA---------------------------------------GCAA--------------------------------------------------------------CGG---------------------------CA------------ACGGCAA---CG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.091000000000100000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................C---------------------AGCA---------------------------------------GCAA--------------------------------------------------------------CGG---------------------------CA------------ACGGCAA---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.081000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC----AGCATC---AGCAG--------------------------------------------------------------------------------------------CAGCAGCAG....................................................23190.051000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAGCA---------ACAGCAACAA------------------------------------------------------CA------------AC....................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000010000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC---AGCAG--------------------------------------------------------------------------------------------CAGCAGCAGCAGCA...............................................22200.051000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCAG........................................26200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCATCAGC.......................................20200.051000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG--------------------------------------------------------------------------------------------CAGCAGCAGCAGCAGCATCAGCA......................................26200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----AGCATC---AGCAG--------------------------------------------------------------------------------------------CAGCAGCC.....................................................21200.051000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCATCAGCAGCA...................................19200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATC----AGCATC---AGCAG--------------------------------------------------------------------------------------------CAGCAG.......................................................21200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CAA--------------------------------------------------------------CGG---------------------------CA------------ACGGCAA---CGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000001000
droMoj3
CAAAGCGAC-G--CAAGTGAAAGTG----------------------------------------TTGACAACAAAATCAAAAGTGAATCAAATGAGCAAGAACAAA-------------------------------------C------------------------------------------TGC---------------------AACA---------------------------------------GCAA--------------------------------------------------------------CAT------------------------------------------------------------------------------------TGACAACAGCA------------------------------------------------------------------------------------------------GCAA------------CTGCCGAATTGCC------------------------------------------GCTACATTATCG--CGGCC-TA-----------------------------------------AACAAC--------------------TCGGTGA--------------------TCATAGCTAACTATGCTC----------ATC---AGCAGCA--------------------------------------------------------------------------------------------ACAGCAACAGCAACAGCAACAACAACAAG---CAG----------------AGCAAC-ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............AAGTGAAAGTG----------------------------------------TTGACAACAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------------------------------AACAAC--------------------TCGGTGA--------------------TCATAGCTAA......................................................................................................................................................................................2511.001000001
................................................................................................................................................C------------------------------------------TGC---------------------AACA---------------------------------------GCAA--------------------------------------------------------------CAT------------------------------------------------------------------------------------TGACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCC-TA-----------------------------------------AACAAC--------------------TCGGTGA--------------------TC..............................................................................................................................................................................................2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC---AGCAGCA--------------------------------------------------------------------------------------------ACAGCAACAGCA...............................................22170.061000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC---AGCAGCA--------------------------------------------------------------------------------------------ACAGCAACAGCAA..............................................22180.061000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCAACAACAAC.................................20200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC---AGCAGCA--------------------------------------------------------------------------------------------ACAGCAACAGC................................................21200.051100000
droGri2
CAAAGCGAC-G--CGAGTGAAAGTG----------------------------------------TTGACAACAAAATCAAAAGTGAAACAAACGTGCAAGAACAAA-------------------------------------C------------------------------------------TAC---------------------GACT---------------------------------------GCAA--------------------------------------------------------------CTG------------------------------------------------------------------------------------CGACAGCAGCAA------------------------------------------------------------------------------------------------CAA------------CAGTTGAATTGCC------------------------------------------GTTGCATTATCG--GGGCT-TA-----------------------------------------AACAAT--------------------TCGGTGA--------------------TTATAGCCAACTATGCAC----------ATC---AGCAGCAG-----------------------------------------------------------------------------------------------CA---ACAAGCA---GAACAACAAC---AGC----------------AGCAGC-ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCA---GAACAACAAC---AGC----------------AGCA....2311.00110
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG-----------------------------------------------------------------------------------------------CA---ACAAGCA---GAACAACAAC---A..........................2711.00110
droWil2
CAACAG--CAGCAA---C-------------------------------AATGGCAGCAACAACA------ACAGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTGCAGC----AG----------CAACAACAACAGCAGCAACAACAACAGCAGCAGCA-----ACAACAGCATCAGCAACA---G------CAA---------------CA---------------GCAGCAACGA---ATG------------CAACAGCAACAGCAACAG------------------------------------------------------------------------------------------------CAGCAACAATTGCAGCAACAA---------------------C---------------------------------------------------------------------------------------------------------AACAACAG----------------------CAAC-AACAA-------------------------CGACAGCAGCAACAACAA--------------------------------------------------------------------------------------------CAGCAGCAGCAACAACAGCAACAACAACAGC---AGC----------------AGCAAC-ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............AA---C-------------------------------AATGGCAGCAACAACA------ACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.7014014000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA--------------------------------------------------------------------------------------------CAGCAGCAGCAACA...............................................18200.20400040
.....................................................................................................................................................................................................................................................AGC----AG----------CAACAACAACAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.20400040
..........................................................AACAACA------ACAGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.20404000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGCAACAA---------------------C---------------------------------------------------------------------------------------------------------AACAACAG----------------------C.............................................................................................................................................................................................................24100.20202000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAACAA---------------------C---------------------------------------------------------------------------------------------------------AACAACAG----------------------CAAC-AACA.....................................................................................................................................................................................................2860.17101000
........................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15300030
............AA---C-------------------------------AATGGCAGCAACAACA------ACAGC-----------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15302010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA--------------------------------------------------------------------------------------------CAGCAGCAG....................................................18200.15300030
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAA--------------------------------------------------------------------------------------------CAGCAGCA.....................................................19200.15300030
.............................................................................................................................................................................................................................................................................ACAACAGCAGCAACAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
...................................................................................................................................................................................................................................................................................................................................................................................CAACGA---ATG------------CAACAGCAACAGCAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.13101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAACAA---------------------C---------------------------------------------------------------------------------------------------------AACAACAG----------------------CAAC-A........................................................................................................................................................................................................2580.13101000
.........................................................................................................................................................................................................................................................................................................................TCAGCAACA---G------CAA---------------CA---------------GCAGCAACGA---A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.11100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAACAGC---...........................19200.10200020
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTGCAGCAACAA---------------------C---------------------------------------------------------------------------------------------------------AACAACAG----------------------C.............................................................................................................................................................................................................27100.10101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA--------------------------------------------------------------------------------------------CAGCAGCAGCAAC................................................22200.10200020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAACAA--------------------------------------------------------------------------------------------CAGC.........................................................19200.10200020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGCAACAA---------------------C---------------------------------------------------------------------------------------------------------AACAACAG----------------------..............................................................................................................................................................................................................23100.10101000
.......................................................AGCAACAACA------ACAGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000
.......................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAGCA-----AC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------------------------CGACAGCAGCAACAACA..........................................................................................................................................................19110.09100100
...........................................................................................................................................................................................................................................................................................................................AGCAACA---G------CAA---------------CA---------------GCAGCAACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.09100010
.........................................................................................................................................................................................................................................................................................................CA-----ACAACAGCATCAGCAACA---G------CAA---------------CA---------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08101000
.................................................................................................................................................................................................................................................................................................................CAACAGCATCAGCAACA---G------CAA---------------CA---------------GCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------------------------CGACAGCAGCAACAAC...........................................................................................................................................................18120.08100010
.............................................................................................................................................................................................................................................................................................CAACAGCAGCAGCA-----ACAACAGCATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.08100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGCAACAA---------------------C---------------------------------------------------------------------------------------------------------AACA........................................................................................................................................................................................................................................19130.08100010
..................................................................................................................................................................................................................................................TGCAGC----AG----------CAACAACAACAGCAGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28140.07100010
.........................................................................................................................................................................................................................................................................................................CA-----ACAACAGCATCAGCAACA---G------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.07100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------------------------------------------------------CAGCAGCAGCAACAACAGCAACAA.....................................25150.07100010
................................................................................................................................................................AAC---------AA-------------------------------------------------------------------CTGCAGC----AG----------CAACAACAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.07101000
...............................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAG------------------------------------------------------------------------------------------------CAGCAACAATT.....................................................................................................................................................................................................................................................................................................................................................................................25160.06100010
.................................................................................................................................................................................................................................................................................................................CAACAGCATCAGCAACA---G------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.06100010
.....................................................................................................................................................................................................................................................................................................................AGCATCAGCAACA---G------CAA---------------CA---------------GCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
.............................................................................................................................................................................................................................................................................................................................................................................................TG------------CAACAGCAACAGCAACAG------------------------------------------------------------------------------------------------CAGC............................................................................................................................................................................................................................................................................................................................................................................................24170.06101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAGCAACAACAACAGC---A..........................26190.05100010
........................................................................................................................................................................................................................................................................................................................ATCAGCAACA---G------CAA---------------CA---------------GCAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24190.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAACAACAGC---AGC----------------A.......26200.05100010
....AG--CAGCAA---C-------------------------------AATGGCAGCAACAACA------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
............................................................................................................................................................................................................................................................AG----------CAACAACAACAGCAGCAACAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
................................................................A------ACAGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTGCAGC----AG----------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..............................................................................................................................................................................................................................................................................................AACAGCAGCAGCA-----ACAACAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
........................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAACAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAACAACAG...............................21200.05101000
.........................................................................AGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTGCAGC----AG----------CAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...........CAA---C-------------------------------AATGGCAGCAACAACA------ACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAGC---AGC----------------AGCAAC-A25200.05100010
.............................................................AACA------ACAGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAG------------------------------------------------------------------------------------------------CAGCAACAATTG....................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
........................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAGCA-----A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAA--------------------------------------------------------------------------------------------CAGCAGCAG....................................................21200.05100010
...............................................................................................................AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTGCAGC----AG----------CAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...................................................................................................................................................................................................................................................................................GCAGCAACAACAACAGCAGCAGCA-----.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.......................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAGCA-----ACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
............AA---C-------------------------------AATGGCAGCAACAACA------ACAGC-----------------------------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.............A---C-------------------------------AATGGCAGCAACAACA------ACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...........................................................................................................................................................................................................................................................................CAACAACAGCAGCAACAACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100001
.........................................................................AGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTGCAGC----AG----------CAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................TG------------CAACAGCAACAGCAACAG------------------------------------------------------------------------------------------------C...............................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAA--------------------------------------------------------------------------------------------CAGCAGCAGCAACA...............................................24200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------C---------------------------------------------------------------------------------------------------------AACAACAG----------------------CAAC-AACA.....................................................................................................................................................................................................20200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA--------------------------------------------------------------------------------------------CAGCAGCAGCAACAACA............................................21200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAGC---AGC----------------........18200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAA--------------------------------------------------------------------------------------------CAGCAGCAGCA..................................................21200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAA--------------------------------------------------------------------------------------------CAGCAGCAGCAA.................................................26200.05101000
............................................................................................................................................................................................................................................................................AACAACAGCAGCAACAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...............................................................CA------ACAGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...........CAA---C-------------------------------AATGGCAGCAACAACA------ACAGC-----------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.......................................................................ACAGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTGCAGC----A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAACAG------------------------------------------------------------------------------------------------CAGCA...........................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------------------------------------------------------CAGCAGCAGCAACAACAGCA.........................................22200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGC---AGC----------------AGCAA...20200.05100100
................................................................A------ACAGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTGCAGC----AG----------CAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
........................................................................................................................................................................................................................................................................................................................ATCAGCAACA---G------CAA---------------CA---------------GCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.....................................................................................................................................................................................................................................................................................AGCAACAACAACAGCAGCAGCA-----ACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA--------------------------------------------------------------------------------------------CAGCAGCAGCAACA...............................................23200.05100010
.............................................................AACA------ACAGC-----------------------------------AAC----------------------------------------------AAC---------AA-------------------------------------------------------------------CTGCAGC----A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGC---AGC----------------AGCAAC-A23200.05100001
.........................................................................................................................................................................................................................................................................AACAACAACAGCAGCAACAACAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAACAA.....................................19200.05101000
.........................................................................................................................................................................................................................................................................AACAACAACAGCAGCAACAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA--------------------------------------------------------------------------------------------CAGCAGCAGCAACAACAGCA.........................................25200.05100010
.............A---C-------------------------------AATGGCAGCAACAACA------ACAGC-----------------------------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAA--------------------------------------------------------------------------------------------CAGCAGC......................................................21200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAA---------------------C---------------------------------------------------------------------------------------------------------AACAACAG----------------------CA............................................................................................................................................................................................................18200.05101000
................................................................................................................................................................................................................................................................................ACAGCAGCAACAACAACAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCAACAG------------------------------------------------------------------------------------------------CAGCA...........................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
......................................................................................................................................................................................................................................................................................GCAACAACAACAGCAGCAGCA-----.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..................................................................................................................................................................................................................................................................................AGCAGCAACAACAACAGCAGCAGCA-----A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
...............................................................................................................................................................................................................................................................................AACAGCAGCAACAACAACAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100001
....................................................GGCAGCAACAACA------ACAGC-----------------------------------AAC----------------------------------------------AA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA--------------------------------------------------------------------------------------------CAGCAGCAGCAACAA..............................................19200.05100010
............................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCA-----ACAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..........................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCA-----ACAACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.................................................AATGGCAGCAACAACA------ACAGC-----------------------------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
......................................................................................................................................................................................................................................................................................GCAACAACAACAGCAGCAGCA-----ACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAA---------------------C---------------------------------------------------------------------------------------------------------AACAACAG----------------------CA............................................................................................................................................................................................................20200.05100010
....................................................GGCAGCAACAACA------ACAGC-----------------------------------AAC----------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
dp5
CAATAT--ATGCAA---C-------------------------------AGCAACATATGCA---------ACAGC-------------------------------AA-AATA----------------------------------------------------------TG-------------------------------------------------------------------CAGCAGC-----------------AACATCTGCAACAGCAACATCTGCAGCAGCAACA-----GCAGAAGCAGCAGCAACA---G---------------------AAGCAGC---------------AG------------------------CAACAGCAGCAGCAACAG------------------------------------------------------------------------------------------------CAGCAGCAACAACAGAAGCAG---------------------C---------------------------------------------------------------------------------------------------------AGCAACAG----------------------CAGC-AGCAG-------------------------AAGCAGCCGC---AGCAGCAG-----------------------------------------------------------------------------------------CAGGTGCAGCAGCAACATCAGCAGCAGCAGG---TAC----------------AGCAGC-ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------------CAGC-AGCAG-------------------------AAGCAGCCGC---AG............................................................................................................................................................2311.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGAAGCAG---------------------C---------------------------------------------------------------------------------------------------------AGC.........................................................................................................................................................................................................................................1970.1410010000000
...............................................................................................................................................................................................................................................................................................GCAGCAGCAACA-----GCAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.0610100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------------------------------------------------------------------------AGCAACAG----------------------CAGC-AGCAG-------------------------...........................................................................................................................................................................18200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................AGC---------------AG------------------------CAACAGCAGCAGCAACAG------------------------------------------------------------------------------------------------C...............................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
.................................................................................................................................................................................................................................................................................................................................................................................AG------------------------CAACAGCAGCAGCAACAG------------------------------------------------------------------------------------------------CAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000001
................................................................................................................................................................................................................................................................................................................................................................GC---------------AG------------------------CAACAGCAGCAGCAACAG------------------------------------------------------------------------------------------------C...............................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
.................................................................................................................................................................................................................................................................................................................................................................C---------------AG------------------------CAACAGCAGCAGCAACAG------------------------------------------------------------------------------------------------CAGCA...........................................................................................................................................................................................................................................................................................................................................................................................26200.0510001000000
.................................................................................................................................................................................................................................................................................................................................................................................AG------------------------CAACAGCAGCAGCAACAG------------------------------------------------------------------------------------------------CAGC............................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCAACAG------------------------------------------------------------------------------------------------CAGC............................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................GC---------------AG------------------------CAACAGCAGCAGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
............................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAG------------------------------------------------------------------------------------------------CAGCA...........................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------------------C---------------------------------------------------------------------------------------------------------AGCAACAG----------------------CAGC-AGCA.....................................................................................................................................................................................................21200.0510000010000
..................................................................................................................................................................................................................................................................................................................................................................................G------------------------CAACAGCAGCAGCAACAG------------------------------------------------------------------------------------------------CAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000001
................................................................................................................................................................................................................................................................................................................................................................GC---------------AG------------------------CAACAGCAGCAGCAACAG------------------------------------------------------------------------------------------------CAGCA...........................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAG------------------------------------------------------------------------------------------------CAGCAGCAACA.....................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
.............................................................................................................................................................................................................................................................................................................................................................GCAGC---------------AG------------------------CAACAGCAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
droPer2
CCCAGC--C-G--CAACCGCCAGTG----------------------------------------GCAACAACACAAC-----------------------------AA-CAG-----------------------------------------------------------------------------------------------------------------------------------CAGC--------AA--------------------------------------------------------------------CAACAAGTGCAGCAGCAGCACCAACAGCAGCAGCAGCAACAACAA---CAGCAGCAG---CAACAACAACA---------------------G-----------------------------CAA----------CAACAGCAGCAACA------------GCAATCGCTCAATGA---------------------------------------------------CCAACTGCAGCATTCCA-------------------------------------TCAA------------------CGATATAGTGGGAGG------------------------------------------------------------------------------AGGCGGTGGC---AGCTCTGGAGGAAGCAG--------------------------------------------------------------------------------CAGCAGCAAC-----------CAACAGCAGCAACAGCCCCAA-----------ATCTCG-GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---------------------------------------------------CCAACTGCAGCATTCCA-------------------------------------TCAA------------------C.......................................................................................................................................................................................................................................................................2411.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGC---AGCTCTGGAGGAAGCAG--------------------------------------------------------------------------------CA...........................................................2611.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................AACAACA---------------------G-----------------------------CAA----------CAACAGCAGCAACA------------G.....................................................................................................................................................................................................................................................................................................................................................................................................................2650.201010000
........................................................................................................................................................................................................................................................................................................................................................CACCAACAGCAGCAGCAGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.141001000
.........................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------------G-----------------------------CAA----------CAACAGCAGCAACA------------G.....................................................................................................................................................................................................................................................................................................................................................................................................................2390.111010000
....................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACA---------------------G-----------------------------CAA----------CAACAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................23110.091001000
......................................................................................................................................................................................................................................................................................................................................................AGCACCAACAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.071001000
.....................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAA---CAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------------G-----------------------------CAA----------CAACAGCAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAACAACAACA---------------------G-----------------------------CAA----------................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
.................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAACAA---CAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000
droAna3
CCCAGCAAC-A--GCAGC-------------------------------AGCATCAAGCACA---------ACAAC-------------------------------AA-CATC----------------------------------------------------------AGCAGCAGCAGCAAT---CA-CAACAACAT---------------------------------------------A----AG----------CAGCAA---------------CAGCAGCAGCACCA-----GCAGCAGCAACATCTTCA------------G------------CAGAAG---------------CAG---CAA------------------------------------------------------------------------------------CAGCAGCAGCAACA---------TCAACCA------------ACACAGCAGCAGCAATCGCAGGCACAT---------------------C------------------------------------------------------------------------------------------------AGCAAC--------------------TCCAGGCT--CATCAGC-AGCAA-------------------------CATCTCCATC---AGCAACAG-----------------------------------------------------------------------------------------CAGCAGCAACACCACCATCAGCAGCAGCAGC---AAC----------------AGCAAC-ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................A---------------CAGCAGCAGCACCA-----GCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATC---AGCAACAG-----------------------------------------------------------------------------------------CAGCAGCAA....................................................2170.141001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGC---AAC----------------AGC.....19200.102020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAGCAGC---AAC----------------AGC.....21200.102020000
.........................................................................AAC-------------------------------AA-CATC----------------------------------------------------------AGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18130.081010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAG-----------------------------------------------------------------------------------------CAGCAGCAACAC.................................................19140.071010000
..CAGCAAC-A--GCAGC-------------------------------AGCATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.061100000
...AGCAAC-A--GCAGC-------------------------------AGCATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.061000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAGCAGC---AAC----------------AGCC....22200.051010000
....GCAAC-A--GCAGC-------------------------------AGCATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000001
...............................................................................................................................................................................................................................................................................................................................................................AG---------------CAG---CAA------------------------------------------------------------------------------------CAGCAGCAGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................AG---CAA------------------------------------------------------------------------------------CAGCAGCAGCAACA---------.........................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
..CAGCAAC-A--GCAGC-------------------------------AGCATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
droBip1
CCAAGCGCC-G--CAACAGGTTGTA----------------------------------------CCGCCAGTGGCTGCCCAGGTGCAACCTCCGCAGCAGCAACAA-------------------------------------C------------------------------------------AGC---------------------AGCA---------------------------------------GCAA--------------------------------------------------------------CAG---------------------------CA------------ACAACAA---CAGCAGCAG---CAGCAACAACACC---------------------------------------------------------------AACAGCAGCAACA------------ACAATCGCTGAACGA---------------------------------------------------TCAGCTGCAGCACTCCA-------------------------------------TCAA------------------CGACATTGTTGGGGGAGGAAGCAGT--------------------TCGGGAA--------------------CCACGACC--------------------------A------------GCAGCCAGAGCA----------------------------------------------------------------------GTCAGCAGCAGCAGCAACTGCAGCAGAGCCTGC----CG----------------AGCATG-CSizeHit CountTotal NormTotal
No Reads
droKik1
CATCAC--CATC-ACAGTCACAGTC------------------------AACTCCAACATCA---------ACACC-------------------------------AA-CA-------------------------------------------------------------A---CAACAGTTAC---AA-CAACAACAGGACCCACAC------------------------------CAACAACAGCC--GCTACACCAA--------------------------------------------------------------------------------------CA---------------GCAG---CAG---CTGCAGCAT---------------------------CAACA---G------------------------------------------------------------------------------------CAACACCAACAACACTACCAA------------CAACATGCCATCCAACACCAACAGGCTAACAAAATCTCATATCGTGGCATTTTCA--CCACCACA--GGCAACGCCATGAACGCAGC----------------------------------------------------------------------------------------------------AGC---AG---CC--------------------------------------------------------------------------------------------GCCGCAGCAGCTGC-CCAGCAGCAGCAGC---AAC----------------AGCAGC-ASizeHit CountTotal NormTotal
No Reads
droFic1
CAGCAC--CAC---CAGC-------------------------------AACACCAGCAGCA---------ACAGC-------------------------------AG-CAGC----------------------------------------------------------------------------AGC------------------AGCACCACCTGCAACACCAGCAGCTGCAGC----------A--GCAG--------------------------------------------------------------CAG---------------------------CA------------ACACCAA---CAGCAGCAG---CACCACCACCACCA---CCAGCAACA------------------------------------------------C------------CAGCAGCTGCACCAC------------GATCCGCAGCAGCAGCATCCGCAGTACCAC---------------------GCCC--------------A-------------------------------------C-------------------------------------------------------------------------------CAGC-TGCA------------CGCCCACGCG----CTGCCGCACC---AGCAGCAG--------------------------------------------------------------------------------------------CAGCAGCAACAGCAGCAACAGCAGCAGC---AAC----------------AACA-G-CSizeHit CountTotal NormTotal
No Reads
droEle1
CAAACAGTG-G--CTGGAAAAACAG----------------------------------------CTGAAAAAAGC---------------------------------------------------------------------------AACAAAAAAATGGGGAAAAAT------------------AA-------------------------------------------------CAGCAACAAAT--GGCAAACAAC--------------------------------------------------------------------------------------CA---------------GCAG---CAG---CAGCAGCAG---------------------------TAGCAACAACA------------------------------------------------------------AAAA--------------------------A------------CAAACAAATT-TC------------------------------------------AATTCGTTAGCGCCCGGCC-TATTGTAGATGTTGCTGTTGTAGC---------------------------------------------------------------------------------------TGC----AACAGCAAC---AC--------------------------------------------------------------------------------------------------GAGCAGCAGCAGCAGCAACAGCAGCACCAACAGCAACAAATTGCGGCAGAGT---GAGSizeHit CountTotal NormTotal
No Reads
droRho1
TTCGCG-TC-GCAG---C-------------------------------AGCGCCAGCAACAACA------ATA----------------------------------AATAGCAAAAACTGAGCAGCGTTCGGCAAAGCGCAGCAACAGCAACAAAGGCAACACTTAAAATAA-------------------------------------------------------------------CAGCAAC---A--GAAACGCCAA--------------------------------------------------------------------------------------TT---------------G---------------------------TCACAGCAACTGCAACAGCAGCAACAAC---A------------ACCAAGAGGCGACAAGCGG--TCAACAGTAGCAACA------------ACAA--------------------------------------------------------------------------------------------------------------------------GCGCTGCAGTCGCAGC----------------------------------------------------------------------------------------------------AGC---AG--------------------------------------------------------------------------------------------------CAGCAGCAGCAGCTGCAGTAGCAGCAGC---AGC----------------AGCAAC-GSizeHit CountTotal NormTotal
No Reads
droBia1
CCAAGCGC--G--CAAGCAGAAGAT----------------------------------------AATCATACAAAACCAGATGATACTCAAT--GCCAGTCAC------CA-------------------------------GCAGCAGC------------------------------------AGC---------------------AGCA---------------------------------------GCAA--------------------------------------------------------------------CATCCTCCTCAGCAGCAACACCAGCAGCAGCAGCAGCAACAGCAA---CAG------------------------------------------------------------------------------------------------------------------------------------CAGCAGCATGTG--------------------------------------------------------------------------------GCC-C-------AT-------------------------GGGAAGAAG------------------------------------------------------GCAGCCAGAAA---ACACC-------AGC---A------------ACACCTACAGCA----------------------------------------------------------------------G-CAACAGCAGCAGCAGC------------------AGC----------------AG---CAGSizeHit CountTotal NormTotal
No Reads
droTak1
AG---CGCG-G--CGGAAGACAGCG----------------------------------------GCAATTTCAAAACC----------------------------AA-CA-------------------------------------------------------------G------------------------------------------------------------CCACAGC----------A--ACAG--------------------------------------------------------------CAGCAACATCAAGCA-------------------------------------------AT------------------------------------------------CAACAGCAAC------TCGGCAATCAGCGGAATCAACAGCAGCAATA------------G------------AATCGTAGATAGCAGCAACTACAATAAAAT---------------------GACCAAAAATAGCTT---------------------------------------------------------------------------TAGAGGTAGCATG---------AGATTTACCACACCAAGTACCAATCCTCAATCG---------------TCATACTCATC----ATC-AC---AGCAGCA--------------------------------------------------------------------------------------------GCAGCAGCAACAGCAACAGCAGCAACATC---AGA-----------------ACCAG-ASizeHit CountTotal NormTotal
No Reads
droEug1
CTGAGCAGC-G--TTCGGCAAAGCG----------------------------------------CAG----------------------------------------------------------------------------CAACAGCAACAAAAGCAACACTAAAACTAA-------------------------------------------------------------------CAGCAGC---A--GCAAAACCAA-----------------------------------------------------------------------------------------------------TTGCAA---CTGCAGCAG---TAA---------------------------CAACA---ACAACAACAGCAACATCCAAACGGCGACAAGCGG--TCAACAGCAGCAACA------------GCAA--------------------------------------------------------------------------------------------------------------------------ACGCTGCAGTCGCAGT---------------------------------------------------------------------------------------CG-------------C---AGCAGCAG---CAGCAGCTGCAGTA-----------------------------------------------------------------------------GCAGCAGCAGCAGCAGCAACGCTAGC---GTC----------------GGCAGC-GSizeHit CountTotal NormTotal
No Reads
dm3
CAAAACGCA------ATTAGTAGCA----------------------------------------GTAACAACGCCA---------------------------------------------------------------------------------GCAACACTTACAACAG---CAACAG-----GCAGC------------------AGCAACAACTGCAACTGCAG----------CAACTGCAACT--GCAA--------------------------------------------------------------CAG---------CAA---------------CA---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGCAA---CAGCAACTGCAACTGCAACTGCAGCAGCAACACGACTAGCATCAGCAACATATGTGCACAAGAGCAACATCAGCAGCTTGAGATGA------------------------AAGCGGC---AAG----------------AG---CAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................G---------CAA---------------CA---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGC........................................................................................................................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AA---------------CA---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGCAA---C..................................................................................................................................................2721.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGCATCAGCAACATATGTGC..........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGCAACACGACTAG............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................A---------------CA---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGCA.......................................................................................................................................................2430.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................AA--------------------------------------------------------------CAG---------CAA---------------CA---------------GCAGCAACTG---C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CAACAG---CAACAG-----GCAGC------------------AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................A---------------CA---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCA..........................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................T--GCAA--------------------------------------------------------------CAG---------CAA---------------CA---------------GCAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AA---------------CA---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCA..........................................................................................................................................................2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CAA---------------CA---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGC...........................................................................................................................................................2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCA..........................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................ACTGCAACT--GCAA--------------------------------------------------------------CAG---------CAA---------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.1310000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CAA--------------------------------------------------------------CAG---------CAA---------------CA---------------GCAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CA---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGCA.......................................................................................................................................................23160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................CT--GCAA--------------------------------------------------------------CAG---------CAA---------------CA---------------GCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.0610000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CA---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGC........................................................................................................................................................22170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................A---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGC........................................................................................................................................................21180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTGCAGCAGCAACA...................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CA---------------GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGA........................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGCAA---CAGCAACT...........................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGCAA---CA.................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GCAGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGCA.......................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AGCAACTG---CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGC........................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGCAGCAA---CAGCAAC............................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAA---CAGCAACTGCA........................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAGCAG--CAGC---AGC-------------------------------AACAGCAACAACA---------ACACT-------------------------------AG-CAAC----------------------------------------------------------AA------------T---AA-------------------------------------------------CAACAAT----AG----------CAGCAACAGCGGCAGCAACAGCAGCAGCAACAACACACCA--AACGGTGC--G---------------------------------------------------CAG---CAG------------------------------------------------------------------------------------CAGCAGCAGCAACA------------ACAC--------------------------------------------------------------------------------------------------------------------------CATCAGCAGCAGCAGC----------------------AGCAGCA-----------------------T--CATCAGC-AGCAACGTGTTGTTGCCAGCAGCAA---CC-------AGC---AACAGCAG-----------------------------------------------------------------------------------------CAACAGCAGCTGCAGC---------AACAGC---AGC----------------AG---CAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................T---AA-------------------------------------------------CAACAAT----AG----------CAGCAACAGCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGCAGCAA---CC-------AGC---AACAGCAG-----------------------------------------------------------------------------------------CAACA........................................................2911.00101000000000000000
.......................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAACAACAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2151.00500000500000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACA------------ACAC--------------------------------------------------------------------------------------------------------------------------CATCAGCAGCAG............................................................................................................................................................................................................................................................................2611.00100000000001000000
..................................................................................................................................................................................................................................................AACAAT----AG----------CAGCAACAGCGGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
..........................................................................................................................................................................................T---AA-------------------------------------------------CAACAAT----AG----------CAGCAACAGCGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................G---CAG------------------------------------------------------------------------------------CAGCAGCAGCAACA------------ACAC--------------------------------------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................22100.90900009000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC----------------------AGCAGCA-----------------------T--CATCAGC-A........................................................................................................................................................................................................2270.71500005000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC----------------------AGCAGCA-----------------------T--CATCAGC-AGCAA....................................................................................................................................................................................................2220.50100000100000000000
.......................................................................................................................................................................................................................................................................................................AACACACCA--AACGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC----------------------AGCAGCA-----------------------T--CATCAGC-A........................................................................................................................................................................................................18140.07100000010000000000
............................................................................................................................................................................................................................................................................AACAGCGGCAGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16190.05100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCTGCAGC---------AAC.................................15200.05100000000001000000
droSec2
CTGCACCTC-G--CCCCCCGACGTGGTGCCCCGAGCAGCCAATTTCCATA---------------ATAGCAACACCA---------------------------------------------------------------------------------TCAGTACTGGCCGCAA------------T---GAC------------------AACA---------------------------------------GCAA------CAGCCA-----------------------------------------------------------------------------------------------CGGCAG---CAGCAGCAG---CAG---------------------------CAGCAAC---A------------------CA---------------A------------------------CC---------------AGCAGCA---GCAA--------------------------------------------------------------------------CATCGCCCAGC--AGCAGCAGGCGCCGCTG------------------GCTG------------------------------------------------------------------------------CGATGACAGC---AGCGCTGGGAGATGCAACTTCAGCA----------------------------------------------------------------------G-CAACAGCAGCAGCCGCATCAGC------------------CAGTGGCATCGTTGTCGAG-ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................ACA---------------------------------------GCAA------CAGCCA-----------------------------------------------------------------------------------------------CGGCAG---CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA----------------------------------------------------------------------G-CAACAGCAGCAGCC...............................................20150.0711000
droYak3
CAAAGCGCA-G--CAACAG--------------------------------------------------C---------------------------------------------------------------------------------AACAAAGGCAACACTAAAACTAA-------------------------------------------------------------------CAGCAGC--------GACACCAA------TTGCTACTGCAACACCAGCAGCAGAAACA--------------------------------------------------------------------------------------------------------------------------------------------ACCAAGCGGCGGCAA---G--TCAGCAGCAGCAACA---------ACAAC---------------AACAGCAGCAGCAATCACAAGAACAA---------------------AA--------------------------------------------------------GCAAGCGCTGCAGTCGCAGT---------------------------------------------------------------------------------------CG----CAGTCGCAGC---AGCAGCAG---CAGCAGCTGCAGTA----------------------------------------------------------------------G-CAGCAGCAGCAGCAGC---------AGCAGC---AAC----------------GC---TAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACA---------ACAAC---------------AACAGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................27120.08101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACA---------ACAAC---------------AAC..................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------------------G-CAGCAGCAGCAGCAGC---------AGCAG...............................23200.05101000000000
droEre2
CAACAG--CAGCAG---C-------------------------------AACAGCAGCAGCA---------ACAAC-------------------------------AG-CAGC--------------------------------------------------------------------------------------------------------------------------------TGCAGC----AG----------CAGCAACAACAGCAGCTACAGCAGCAGCAACAACA-----GCAGCTGCAGCAGCAGCA---A---------------------CAACAGC---------------AG------------------------CTGCAGCAGCAACAACTG------------------------------------------------------------------------------------------------CAGCAGCAACTGCAACAACAG---------------------C---------------------------------------------------------------------------------------------------------AGCTGCAA----------------------CTGC-AACAG-------------------------CAGCTGCAAC---TGCAACAG-----------------------------------------------------------------------------------------CAGCTGCAACTGCAACAGCAGCAGCAGCAAC---AAC----------------AGCAGG-TSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................AGCAACAACAGCAGCTACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAACAG---------------------C---------------------------------------------------------------------------------------------------------AGCTGCA.....................................................................................................................................................................................................................................1920.5011000000
........................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCTACAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000010
....................................................AGCAGCAGCA---------ACAAC-------------------------------AG-C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1530000030
............................................................CA---------ACAAC-------------------------------AG-CAGC--------------------------------------------------------------------------------------------------------------------------------TGCAGC----A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000100
...................................................................................................................................................................................................................................................................................................CAACAACA-----GCAGCTGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000100
................................................................................................................................................................................................................................................................................................................................CA---A---------------------CAACAGC---------------AG------------------------CTGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAAC---AAC----------------AGCAGG-.1990.1111000000
.................................................AACAGCAGCAGCA---------ACAAC-------------------------------AG-CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000200
............................................................................................................................................................................................................................................................................................................................................................AACAGC---------------AG------------------------CTGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.0810001000
.........................................................................AAC-------------------------------AG-CAGC--------------------------------------------------------------------------------------------------------------------------------TGCAGC----AG----------CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.0810001000
.......................................................................................................................................................................................................................................................................................................AACA-----GCAGCTGCAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.0810001000
...................................................................................................................................................................................................................................................GCAGC----AG----------CAGCAACAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000100
CAACAG--CAGCAG---C-------------------------------AACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000
............AG---C-------------------------------AACAGCAGCAGCA---------ACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000
.................................................AACAGCAGCAGCA---------ACAAC-------------------------------AG-CAGC--------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000000
......................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCA---A---------------------CAACAGC---------------AG------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000100

Generated: 05/19/2015 at 07:10 PM