ID:

dvi_15381

 Coordinate:

scaffold_13047:3434436-3434586 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.2 -16.1 -16.0

Flybase annnotation

CDS [Dvir\GJ23421-cds]; exon [dvir_GLEANR_8772:6]; intron [Dvir\GJ23421-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATATATAATTTCTGGGATTCAGAGATGGGGTCACAAATGTTTTTGTTATTAACTTAGTTATTATTACTAGTTACTATTACTATTAACAGCTCTAAGGAAATAGTTGTATATATTTTATACTGCCAAACCAACGAACTCCCATATCTCTTTTCCTGTAGGTCAAGTTCAAATAAATCATTTCAAAATATGTATGTTTTGCAGGACATTGTGTATCGCGACTATGTGGATATCTCAGTGGCTGTGGCCACACC
**************************************************..(((((......(((.((((.......)))).))).....)))))......((.(((((.....))))).)).........(((((.(((((..........))).))...))))).............(((((((....)))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M028
head
 M061
embryo
 V047
embryo
 V053
head
 SRR060678
9x140_testes_total
 SRR060679
140x9_testes_total
 SRR060683
160_testes_total
 M027
male body		 V116
male body		 SRR060686
Argx9_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 SRR060654
160x9_ovaries_total
..............................................................................................................................................................................................................................GTGGATATCTCAGTGGCTGT......... 20 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................ATTGTGTATCGCGACTATGTGG......................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGGACAGGACATTGTGTATCG.................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGTGGATATCTCAGTGGCTGT......... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATGTGGATATCTCAGTGTCTGT......... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATTGTGTATCGCGACTATGTGGATATC.................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GACATTGTGTATCGCGACT............................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CATTGTGTATCGCGACTATGTGGATAT..................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CTATTAACAGCTCTAAGGAAA....................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................GACAGGACATTGTGTATCGCGACT............................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GTGTATCGCGACTATGTGGATATC.................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGGATATCTCAGTGGCTGTGGC...... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GGACAGGACATTGTGTATCGCGACTAT............................. 27 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................GACTAGGTGGATATCTCAGTGGCT........... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GTGGATATCTCAGTGGCTGTTGC...... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGTATCGCGACTATGTGGATA...................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GTGTATCGCGACTATGTGGC........................ 20 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TCTGTGGTTATCTCACTGGCTG.......... 22 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TCTCAGTCGCTGTTGCCACACC 22 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................GACAGGACATTGTGTATCGC................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0
................ATTCGGAGATGGGGTCTTA........................................................................................................................................................................................................................ 19 3 14 0.43 6 6 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGCGACAATGTGGATGTCTCAG................ 22 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................CTGGTTACTATTACT.......................................................................................................................................................................... 15 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................AACTTAGCTATTATTGCGAGT.................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.............GGGATCCGGAGATGGGGT............................................................................................................................................................................................................................ 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGTGTGGGTATCTCAGCGGCT........... 21 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGAGACAATGTTGATATCTC.................. 20 3 12 0.17 2 0 0 0 0 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................CGACATTGTGTTTTGCGACT............................... 20 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................TAAGGAAATAGTAGCATTTAT.......................................................................................................................................... 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TATATATTAAAGACCCTAAGTCTCTACCCCAGTGTTTACAAAAACAATAATTGAATCAATAATAATGATCAATGATAATGATAATTGTCGAGATTCCTTTATCAACATATATAAAATATGACGGTTTGGTTGCTTGAGGGTATAGAGAAAAGGACATCCAGTTCAAGTTTATTTAGTAAAGTTTTATACATACAAAACGTCCTGTAACACATAGCGCTGATACACCTATAGAGTCACCGACACCGGTGTGG
**************************************************..(((((......(((.((((.......)))).))).....)))))......((.(((((.....))))).)).........(((((.(((((..........))).))...))))).............(((((((....)))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 SRR060670
9_testes_total
 V116
male body		 V047
embryo
 SRR060680
 9xArg_testes_total
...................................................................................................................................................AAAAGGGCATCGTGTTCAAGT................................................................................... 21 3 3 0.33 1 0 1 0 0 0
.............................................................................................................................................................................................................................TCGCCTATAGAGGCACCGAC.......... 20 3 4 0.25 1 1 0 0 0 0
.....................................................................................TGTGGAGATTGCTTTAGCAA.................................................................................................................................................. 20 3 5 0.20 1 0 0 1 0 0
.........................ACCCCAGTGTAGACAAAAGC.............................................................................................................................................................................................................. 20 3 6 0.17 1 0 0 0 1 0
.........................................................................................................................CGGTCTAGTTGCTTCAGGGT.............................................................................................................. 20 3 6 0.17 1 1 0 0 0 0
.......................................AAAAACGATTATTGAGTCAATAA............................................................................................................................................................................................. 23 3 8 0.13 1 0 0 0 0 1
.........................................................................................................................CGGTGTGGTTGCTAGAGGGC.............................................................................................................. 20 3 8 0.13 1 1 0 0 0 0
.........................................................................................................................CGGTTGAGTTGCTAGAGGGT.............................................................................................................. 20 3 14 0.07 1 1 0 0 0 0
.........................................................................................................................CGGTTTAGTTGCTAGTGGGT.............................................................................................................. 20 3 15 0.07 1 1 0 0 0 0
.........................................................................................................................CGTTGTAGTTGCTTGAGGGT.............................................................................................................. 20 3 18 0.06 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:3434386-3434636 - dvi_15381 ATATATAATTTCTGGGATTCAGAGATGGG------GTCACAAATGTTTTTGTTATTAACTTAGT-----TA-------------------------------------TTATTACTAGT-----------------------------TACT--------ATT-ACTATTAACAGCTCTAAGGAAATAGTTG---------------TATATATT-------------------------------------------------------------------TTATACTGCCAAACCAACGA--ACTCCCATATCTCTTTTCCTGTAGGTCA--------------AGTTCAAATAAATCATTTCAAAATATGTATGTTTTG-CAGGACATTGTGTATCGCGACTATGTGGATATCTCAGTGGCTGTGGCCACACC---
droMoj3 scaffold_6540:20448041-20448098 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGATATTGTTTACCGTGACTATGTGGATATCTCAGTAGCCGTTGCTACGCC---
droGri2 scaffold_14906:92055-92122 - AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTGTATTTTA-CAGGACATGGTGTACCGCGACTATGTGGATATCTCAGTGGCTGTTGCCACGCC---
droWil2 scf2_1100000004510:319915-320138 - ATATATACTTTGTGGGGT-CGGAGATG------------------CTTCCTTCTGCCTGTTACA-----TA-------------------------------------CA-------------TTTTGGCGACTTTAATATACCATTTCACCCTATGG-----GTGT------------------ATGGTATAATTATTGACACC-------------------------AACTATTAGTTAGGCCTATAAGTTAGTCCCTATTGACATTCTGACTACAAATTTATATTGTCAGAATATAAA--ACTCCCATACTCCTTTTTAAGTA---------------------TCTA-ATTTAGCAATTTAAAAT---------------------------------------------------------------------
dp5 2:25146323-25146434 - ATATATACTTTATGGGGT-CGGAAACG------------------CTTTCTATTGGACGTTACACTAGTTA------CACTAAATACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTGAGTATCGGGTATAAAA----AGAGTTGGGGAAAAGGTTACATACAT
droPer2 scaffold_2179:4593-4734 + ATATAAACTTTATGGGGT-CGGAAACG------------------ATTCCTTCTGGACGTTACA-----CACATCCACTTTTACCACAAATTATTATTATTATTATTATTATTATTA-T-----------------------------TATT--------ATT-ATTAT----------------------------------------------------------------------TATT--------------------------------------------------------ATT--ATTA--------------------------------------------------------------------------------------------------AAT----A----GAGTGTTTTGTTCACATCATA
droAna3 scaffold_13105:51934-52069 - ATATATACTTTATAGGGT-CGGAGATG------------------TCTCCTTCACTGCGTTGCA-----CA-------------------------------------CT-------------TTTGACCAAAATTATAATACCCT------CTGCAA-----GGGT------------------ATAGTTA---------------TATATATAATATAC---------AATAATAAACAAA--------------------------------------------------------ATA--AATAAGA-------------------------------------------------------------------------------------------------------------------TAACTATTTT---
droBip1 scf7180000394864:4258-4394 - ATATATACTTTATAGGGT-CGGAGATG------------------TCTCCTTAACTGCGTTGCA-----CA-------------------------------------CT-------------TTTGGACAAAATTATAATACCCT------CTGCAA-----GGGT------------------ATAAATA---------------TATATATA---TAT---------AGTA--------------------------------------------------------ACATATCAACAA--AAT----------------------------------------------------------------------TTCTTTAAGTG------------------------------------------TATA--TCA
droKik1 scf7180000302657:144241-144433 + ATC--TACTTTATAGGGT-CGGAAATGGAAATTCCGTCGGAATTGTTG-----T---TGTTGAA-----CG-------------------------------------AT-------------GTTTAACGAAGCCAT--------------GTTTAA-----CGGT------------------A-----------------------GAAATT---ACTAAAAGCTTTAGTA---ACATGGATCAGACATG-------------------------------------------------------GACCCTTTTTTTTTTTGTAGAGGA--------------ATTATAAA-GGATTTATTCAAAAT-------TTTTG-GGGAACTGTATGAACCG------------------------------------CAA
droFic1 scf7180000453912:1828893-1828950 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTACCGTGATTATGTGGACATCTCGGTGGCCGTGGCCACGCC---
droEle1 scf7180000491080:2631445-2631502 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTACCGCGACTATGTGGATATCTCGGTGGCCGTGGCCACGCC---
droRho1 scf7180000777721:20507-20714 - ATATATACTTTATAGGGT-CGGAGATG------------------TCTCCTTCACTGCGTTGCA-----CA-------------------------------------CT-------------TTTTACCCTAATTATATTGGCGT------CTTCAA-----GGGT-ATAAAAATAAGAATATTATATGTT------------------------------------ATA---------------------------------------------GTATATTTTTAATATTTCAGCATAT---ATTTCATCTTGGT----------TTACAAATTCAAATCAGTGGTAGCA-AAAAAATA----------------TTTTG-CATATATGTATGTATTC------------------------------CAATTA---
droBia1 scf7180000302422:672377-672549 + TTATATACTTTATGGGGT-CGGAAACG------------------TCTCCTTCACTGCGTTGTT-----TA-------------------------------------CTTCTGAAACATACATTTT-----------------------------------------TTAAAAAGTTGAACAGAATATTTT---------------TG-------------------------------------------------------------------TCAAATTGTTAGTGCCACACCAAAAA--AATCCAACGTACT----------ATTTAAAAGCAGATTTACTATTATA-AAATAATAATTTTAAAA---------------------------------------------------------------------
droTak1 scf7180000415386:26260-26459 + ATATATACTTTATGGGGT-CGGAAATG------------------TCTCCTTCACTGCGTTGCA-----AA-------------------------------------CT-------------TCTGACTGAAATCATAATACCCT------CTGCAA-----GGGT------------------ATAATGA---------------AATAAATT---TATAGAAT--------GCTGGGTAGGTCAAAAAAGCAAAC-------------------------------------------------GTCACATTTTCTCATGGATAGGGCG--------------ATTATAAA-GAGTTAATTCAAAATAAA--TGTTATGTTAGAACATT--------------------------------------------GTG
droEug1 scf7180000409797:690716-690773 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATTGTTTACCGCGATTACGTGGACATCTCGGTGGCTGTGGCCACGCC---
dm3 chr3R:7071802-7071859 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTATCGCGACTACGTTGACATCTCTGTGGCCGTGGCTACGCC---
droSim2 3r:14021649-14021706 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTATCGCGACTACGTTGACATCTCTGTGGCCGTGGCTACGCC---
droSec2 scaffold_0:14882948-14883005 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTATCGCGACTACGTTGACATCTCTGTGGCCGTGGCTACGCC---
droYak3 3R:507501-507650 - ATATATACTTTATATGGT-CGGAAACG------------------CTTCCTTCT---TGTTACA-----TA-------------------------------------CT-------------TTTCAACGAAACTAGTATACCCTTTTACTCTACGAGTAACGGGT------------------ATAACA-----ATTGACAGCGGTCGATATCTTGAAC---------AGTA----------------------------------------------------------ATACCAACATAAAGTCTTA-----------------------------------------------------------------------------------------------------------------------TACCTC---
droEre2 scaffold_4770:14548314-14548371 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTACCGCGACTACGTTGATATCTCTGTGGCCGTGGCTACGCC---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATATATAATTTCTGGGATTCAGAGATGGG------GTCACAAATGTTTTTGTTATTAACTTAGT-----TA-------------------------------------TTATTACTAGT-----------------------------TACT--------ATT-ACTATTAACAGCTCTAAGGAAATAGTTG---------------TATATATT-------------------------------------------------------------------TTATACTGCCAAACCAACGA--ACTCCCATATCTCTTTTCCTGTAGGTCA--------------AGTTCAAATAAATCATTTCAAAATATGTATGTTTTG-CAGGACATTGTGTATCGCGACTATGTGGATATCTCAGTGGCTGTGGCCACACC---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTGGATATCTCAGTGGCTGT............2012.002001000000000000000000000000000000100000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTATCGCGACTATGTGG............................2211.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGATATCTCAGTGGCTGT............2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTATCGCGACTATGTGGATATC.......................2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GACATTGTGTATCGCGACT..................................1911.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................CATTGTGTATCGCGACTATGTGGATAT........................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CTATTAACAGCTCTAAGGAAA.............................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTATCGCGACTATGTGGATATC.......................2411.001010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGGATATCTCAGTGGCTGTGGC.........2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTATCGCGACTATGTGGATA.........................2111.001010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTATCGCGACTATGTGGC...........................2020.501000000000000000000000000000000000000000000000000000000000000100
droMoj3
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGATATTGTTTACCGTGACTATGTGGATATCTCAGTAGCCGTTGCTACGCC---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................GTTTACCGTGACTATGTGG............................1911.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTACCGTGACTATGTGGAT..........................2411.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTAGCCGTTGCTACGCC---2011.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................GTGACTATGTGGATATCTCAGT..................2211.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................TTACCGTGACTATGTGGATATCTCAGT..................2711.001000001
droGri2
AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTGTATTTTA-CAGGACATGGTGTACCGCGACTATGTGGATATCTCAGTGGCTGTTGCCACGCC---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................CCGCGACTATGTGGATATCTCAGTG.................2511.00110
droWil2
ATATATACTTTGTGGGGT-CGGAGATG------------------CTTCCTTCTGCCTGTTACA-----TA-------------------------------------CA-------------TTTTGGCGACTTTAATATACCATTTCACCCTATGG-----GTGT------------------ATGGTATAATTATTGACACC-------------------------AACTATTAGTTAGGCCTATAAGTTAGTCCCTATTGACATTCTGACTACAAATTTATATTGTCAGAATATAAA--ACTCCCATACTCCTTTTTAAGTA---------------------TCTA-ATTTAGCAATTTAAAAT---------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
ATATATACTTTATGGGGT-CGGAAACG------------------CTTTCTATTGGACGTTACACTAGTTA------CACTAAATACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTGAGTATCGGGTATAAAA----AGAGTTGGGGAAAAGGTTACATACATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................TAAAA----AGAGTTGGGGAAAAGG..........2111.0010000000010
.....TACTTTATGGGGT-CGGAAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................20200.2550000005000
.......................................................................................................................................................................................................................................................................................................................................................................................................TGAGTATCGGGTATAAAA----AGAG......................22200.2040200000020
....................................................................................................................................................................................................................................................................................................................................................................................................TTTTGAGTATCGGGTATAAAA----AGA.......................24200.1020000000200
...................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGAGTATCGGGTATAAAA----AGAG......................26200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGTATCGGGTATAAAA----AG........................22200.0510100000000
droPer2
ATATAAACTTTATGGGGT-CGGAAACG------------------ATTCCTTCTGGACGTTACA-----CACATCCACTTTTACCACAAATTATTATTATTATTATTATTATTATTA-T-----------------------------TATT--------ATT-ATTAT----------------------------------------------------------------------TATT--------------------------------------------------------ATT--ATTA--------------------------------------------------------------------------------------------------AAT----A----GAGTGTTTTGTTCACATCATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................CG------------------ATTCCTTCTGGACGTTACA-----CAC...............................................................................................................................................................................................................................................................................................................................................................................24201.20240240000
.......CTTTATGGGGT-CGGAAACG------------------AT........................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100
...........................................................TTACA-----CACATCCACTTTTACCA.................................................................................................................................................................................................................................................................................................................................................................22200.051001000
droAna3
ATATATACTTTATAGGGT-CGGAGATG------------------TCTCCTTCACTGCGTTGCA-----CA-------------------------------------CT-------------TTTGACCAAAATTATAATACCCT------CTGCAA-----GGGT------------------ATAGTTA---------------TATATATAATATAC---------AATAATAAACAAA--------------------------------------------------------ATA--AATAAGA-------------------------------------------------------------------------------------------------------------------TAACTATTTT---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.TATATACTTTATAGGGT-CG..................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
droBip1
ATATATACTTTATAGGGT-CGGAGATG------------------TCTCCTTAACTGCGTTGCA-----CA-------------------------------------CT-------------TTTGGACAAAATTATAATACCCT------CTGCAA-----GGGT------------------ATAAATA---------------TATATATA---TAT---------AGTA--------------------------------------------------------ACATATCAACAA--AAT----------------------------------------------------------------------TTCTTTAAGTG------------------------------------------TATA--TCASizeHit CountTotal NormTotal
No Reads
droKik1
ATC--TACTTTATAGGGT-CGGAAATGGAAATTCCGTCGGAATTGTTG-----T---TGTTGAA-----CG-------------------------------------AT-------------GTTTAACGAAGCCAT--------------GTTTAA-----CGGT------------------A-----------------------GAAATT---ACTAAAAGCTTTAGTA---ACATGGATCAGACATG-------------------------------------------------------GACCCTTTTTTTTTTTGTAGAGGA--------------ATTATAAA-GGATTTATTCAAAAT-------TTTTG-GGGAACTGTATGAACCG------------------------------------CAASizeHit CountTotal NormTotal
No Reads
droFic1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTACCGTGATTATGTGGACATCTCGGTGGCCGTGGCCACGCC---SizeHit CountTotal NormTotal
No Reads
droEle1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTACCGCGACTATGTGGATATCTCGGTGGCCGTGGCCACGCC---SizeHit CountTotal NormTotal
No Reads
droRho1
ATATATACTTTATAGGGT-CGGAGATG------------------TCTCCTTCACTGCGTTGCA-----CA-------------------------------------CT-------------TTTTACCCTAATTATATTGGCGT------CTTCAA-----GGGT-ATAAAAATAAGAATATTATATGTT------------------------------------ATA---------------------------------------------GTATATTTTTAATATTTCAGCATAT---ATTTCATCTTGGT----------TTACAAATTCAAATCAGTGGTAGCA-AAAAAATA----------------TTTTG-CATATATGTATGTATTC------------------------------CAATTA---SizeHit CountTotal NormTotal
No Reads
droBia1
TTATATACTTTATGGGGT-CGGAAACG------------------TCTCCTTCACTGCGTTGTT-----TA-------------------------------------CTTCTGAAACATACATTTT-----------------------------------------TTAAAAAGTTGAACAGAATATTTT---------------TG-------------------------------------------------------------------TCAAATTGTTAGTGCCACACCAAAAA--AATCCAACGTACT----------ATTTAAAAGCAGATTTACTATTATA-AAATAATAATTTTAAAA---------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATATATACTTTATGGGGT-CGGAAATG------------------TCTCCTTCACTGCGTTGCA-----AA-------------------------------------CT-------------TCTGACTGAAATCATAATACCCT------CTGCAA-----GGGT------------------ATAATGA---------------AATAAATT---TATAGAAT--------GCTGGGTAGGTCAAAAAAGCAAAC-------------------------------------------------GTCACATTTTCTCATGGATAGGGCG--------------ATTATAAA-GAGTTAATTCAAAATAAA--TGTTATGTTAGAACATT--------------------------------------------GTGSizeHit CountTotal NormTotal
No Reads
droEug1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATTGTTTACCGCGATTACGTGGACATCTCGGTGGCTGTGGCCACGCC---SizeHit CountTotal NormTotal
No Reads
dm3
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTATCGCGACTACGTTGACATCTCTGTGGCCGTGGCTACGCC---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................CGTGTATCGCGACTACGTTGACATC.......................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACGTTGACATCTCTGTGGCCGTGGC.........2613.0030000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGTATCGCGACTACGTTGAC..........................2413.0030000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGTATCGCGACTACGTTGACA.........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTATCGCGACTACGTTGAC..........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCGACTACGTTGACATC.......................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCGCGACTACGTTGACATCTCTGTGG................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GGACATCGTGTATCGCGACT..................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACGTTGACATCTCTGTGGCC..............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CATCGTGTATCGCGACTACGTTGACA.........................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACGTTGACATCTCTGTGGCCGT............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GACATCTCTGTGGCCGTGGC.........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TATCGCGACTACGTTGACAT........................2012.0020000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGACATCTCTGTGGCCG.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTTGACATCTCTGTGGCCGTGG..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GCGACTACGTTGACATCTCTGT..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTATCGCGACTACGTTGACATC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTTGACATCTCTGTGGCCG.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CGTGTATCGCGACTACGTTGACATCT......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGACATCTCTGTGGCCGTGGCT........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GGACATCGTGTATCGCGACTACGTT.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTATCGCGACTACGTTGACATCTC.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CGTGTATCGCGACTACGTTGACATCATC....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTTGACATCTCTGTGGCC..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TATCGCGACTACGTTGACATCTCT....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AGGACATCGTGTATCGCGAC...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TATCGCGACTACGTTGACATCTCTGT..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGTATCGCGACTACGTTGA...........................2311.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGCGACTACGTTGACATCT......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCGCGACTACGTTGACATCT......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ACATCGTGTATCGCGACTACGTTGAC..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GACATCGTGTATCGCGACTACG...............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTATCGCGACTACGTTGACA.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACGTTGACATCTCTGTGGCCGTG...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ATCGCGACTACGTTGACATCTCTGT..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGACATCTCTGTGGCCGT............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTATCGCGACTACGTTGACATCTCT....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTGACATCTCTGTGGCCGTGGC.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GACTACGTTGACATCTCTG...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TCGTGTATCGCGACTACGTTGAC..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGTGGCCGTGGCTAC......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGTATCGCGACTACGTT.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTATCGCGACTACGTTGACATCTCT....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTATCGCGACTACGTTGA...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ATCGCGACTACGTTGACATCTCT....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTATCGCGACTACGTTGACAT........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGTATCGCGACTAC................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CATCTCTGTGGCCGTGGCTACA.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTATCGCGACTACGTTGACAT........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GACATCTCTGTGGCCGTGGCT........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGACATCTCTGTGGC...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTGACATCTCTGTGGCCG.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TG-CAGGACATCGTGTATCGCGACTAC................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
droSim2
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTATCGCGACTACGTTGACATCTCTGTGGCCGTGGCTACGCC---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTATCGCGACTACGTTGACATCTCT....................2712.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTTGACATCTCTGTGGCCG.............2311.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GCGACTACGTTGACATCTCTGTGGCCG.............2711.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GCGACTACGTTGACATCTC.....................1911.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GACTACGTTGACATCTCTGC..................2011.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTATCGCGACTACGTTGACATCTCTGT..................2711.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTGACATCTCTGTGGCCG.............2111.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CGTGTATCGCGACTACGTTGACATCTCT....................2811.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTGACATCTCTGTGGCCGTGGC.........2211.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TACGTTGACATCTCTGTGGCCGTGGCTA.......2811.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CGTGTATCGCGACTACGTTGACATCTCC....................2811.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGTTGACATCG......................1580.13100000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGTTGACATCGT.....................16200.05100000000010000000
droSec2
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTATCGCGACTACGTTGACATCTCTGTGGCCGTGGCTACGCC---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................GACATCGTGTATCGCGACTACGTTGACA.........................2811.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTTGACATCTCTGTGGCCGTGGCTAC......2611.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................CGTGTATCGCGACTACGTTGACATCT......................2611.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTATCGCGACTACGTTGACATCTCTGT..................2911.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTGACATCTCTGTGGCCGTGG..........2411.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTATCGCGACTACGTTGACAT........................2311.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................CGTGTATCGCGACTACGTTGA...........................2111.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................CGTGTATCGCGACTACGTTGACA.........................2311.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTGTGGCCGTGGCTAC......2011.0010010
droYak3
ATATATACTTTATATGGT-CGGAAACG------------------CTTCCTTCT---TGTTACA-----TA-------------------------------------CT-------------TTTCAACGAAACTAGTATACCCTTTTACTCTACGAGTAACGGGT------------------ATAACA-----ATTGACAGCGGTCGATATCTTGAAC---------AGTA----------------------------------------------------------ATACCAACATAAAGTCTTA-----------------------------------------------------------------------------------------------------------------------TACCTC---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................T-------------TTTCAACGAAACTAGTATACCC......................................................................................................................................................................................................................................................................................................2351.00513000100000
............................................................................................................CT-------------TTTCAACGAAACTAGTATAC........................................................................................................................................................................................................................................................................................................2240.75303000000000
...........................................................................................................................TTTCAACGAAACTAGTATACCC......................................................................................................................................................................................................................................................................................................2260.67404000000000
.............................................................................................................T-------------TTTCAACGAAACTAGTATACC.......................................................................................................................................................................................................................................................................................................2250.60312000000000
............................................................................................................................TTCAACGAAACTAGTATACCC......................................................................................................................................................................................................................................................................................................2170.43303000000000
............................................................................................................CT-------------TTTCAACGAAACTAGTATACC.......................................................................................................................................................................................................................................................................................................2340.25101000000000
.....................................................................TA-------------------------------------CT-------------TTTCAACGAAACTAGTA...........................................................................................................................................................................................................................................................................................................2150.20101000000000
.............................................................................................................T-------------TTTCAACGAAACTAGTATAC........................................................................................................................................................................................................................................................................................................2150.20101000000000
......................................................................A-------------------------------------CT-------------TTTCAACGAAACTAGTA...........................................................................................................................................................................................................................................................................................................2050.20101000000000
..............................................................CA-----TA-------------------------------------CT-------------TTTCAACGAAACTAGT............................................................................................................................................................................................................................................................................................................2250.20101000000000
............................................................TACA-----TA-------------------------------------CT-------------TTTCAACGAAACTA..............................................................................................................................................................................................................................................................................................................2270.14101000000000
............................................................................................................................TTCAACGAAACTAGTATACC.......................................................................................................................................................................................................................................................................................................2070.14101000000000
........................................................................................................................................................CTACGAGTAACGGGT------------------ATAACA-----ATT................................................................................................................................................................................................................................................24110.09100000010000
...........................................................................................................................................ATACCCTTTTACTCTACGAGT.......................................................................................................................................................................................................................................................................................21200.05101000000000
droEre2
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTG-CAGGACATCGTGTACCGCGACTACGTTGATATCTCTGTGGCCGTGGCTACGCC---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGTACCGCGACTACGTT.............................2112.0020001100
......................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGATATCTCTGTGGCCGTGGCT........2511.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTACCGCGACTACGTTGA...........................1811.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTGATATCTCTGTGGCCGTGGC.........2511.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTACCGCGACTACGTTGATA.........................2111.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTTGATATCTCTGTGGCC..............2211.0010001000
......................................................................................................................................................................................................................................................................................................................................................................................................TCGTGTACCGCGACTACGTT.............................2011.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTGTGGCCGTGGCT........1811.0010001000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGTACCGCGACTACGTTGATATCTC.....................2911.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTACCGCGACTACGTTGAT..........................2111.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTGTGGCCGTGGCTACGCC---2311.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GATATCTCTGTGGCCGTGG..........1911.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTTGATATCTCTGTG.................1911.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTGATATCTCTGTGGCCGTG...........2311.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGATATCTCTGTGGCCGTGG..........2011.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................CAGGACATCGTGTACCGCGACTAC................................2411.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTACCGCGACTACGTTG............................1911.0010001000
......................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGATATCTCTGTGGCCGTG...........2211.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................TTTG-CAGGACATCGTGTACCGCGACTAC................................2811.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTGATATCTCTGTGGCCGT............2211.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCCGTGGCTACGCC---1811.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGTTGATATCTCTGT..................1911.0010001000

Generated: 05/16/2015 at 11:14 PM