ID:

dvi_15238

 Coordinate:

scaffold_13047:2032431-2032581 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.1 -21.0 -20.8

Flybase annnotation

CDS [Dvir\GJ23745-cds]; exon [dvir_GLEANR_9074:3]; intron [Dvir\GJ23745-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1_DVirRCHelitron+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATATTTCCAAGTAATCGATAAAAATCGATATCGAAACTCTGTTTTTTGAACAATTTTGATAAATATCAAGAGCTAGACAAACTGGACATTTATCTTCTAGAATAGTATATATATTTGCATCTCAACATGATTCAAAATTGAGATTGAGGTAGTTTCTTGGAATAGAAAGATCGCTAATTATTTTATCAATCCTTCCTTCAGATTTCTGCAGCAGCATGGCTTCAATATACCCTTGCTGTTCAGGGAGAAGA
**************************************************(((((((((.....((((.((((((((......(((......))))))))....(((........)))..)))....))))))))))))).((((((..((((.((((........))))..)))).........))))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060680
 9xArg_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR1106724
embryo_12-14h
 V053
head
 M028
head
 M061
embryo
 V047
embryo
 SRR060663
160_0-2h_embryos_total
 SRR060677
Argx9_ovaries_total
 SRR060664
9_males_carcasses_total
 M047
female body
 SRR060667
160_females_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060687
9_0-2h_embryos_total
.................................................................................CTGGACATTTATCTTCTAGAATAGTAT............................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................ATTGAGATTGAGGTAGTTTCTTGGAATAGAAAGGTC............................................................................... 36 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CGCATTTCTGCAGCAGCATGGCTTCA........................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GCTTCCATATACTCTTGCT.............. 19 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CAGATTTCGTCAGCAGCAT.................................. 19 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGGATGGCTCCAATATACC.................... 19 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GAATACTAAGATCGCTAAT......................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...TTTCCAAGTAATCGATAAAAATCGATAT............................................................................................................................................................................................................................ 28 0 20 0.10 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...TTTCCAAGTAATCGATAAAAATCGATA............................................................................................................................................................................................................................. 27 0 20 0.10 2 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0
................................................................................................................................................TGAGGGAGTTTGTTGGATTA....................................................................................... 20 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........AAGTAATCGATAAAAATCGATATCGTA........................................................................................................................................................................................................................ 27 1 14 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................CTCTATCCTTCCTTCATATT............................................... 20 3 18 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................GATAGGGAAACTCCGTTTT.............................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.......................................CGTATTTTGAACAATGTTGAT............................................................................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................GAACTCGATATCAAAACTCT................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
ATATCTCCAAGTACTCGTT........................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........AGTAATCGATAAAAATCGATATCG.......................................................................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TATAAAGGTTCATTAGCTATTTTTAGCTATAGCTTTGAGACAAAAAACTTGTTAAAACTATTTATAGTTCTCGATCTGTTTGACCTGTAAATAGAAGATCTTATCATATATATAAACGTAGAGTTGTACTAAGTTTTAACTCTAACTCCATCAAAGAACCTTATCTTTCTAGCGATTAATAAAATAGTTAGGAAGGAAGTCTAAAGACGTCGTCGTACCGAAGTTATATGGGAACGACAAGTCCCTCTTCT
**************************************************(((((((((.....((((.((((((((......(((......))))))))....(((........)))..)))....))))))))))))).((((((..((((.((((........))))..)))).........))))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060665
9_females_carcasses_total
 SRR060654
160x9_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060655
9x160_testes_total
 SRR060666
160_males_carcasses_total
 SRR060670
9_testes_total
 SRR060673
9_ovaries_total
...................................................................................................................................................................TCTTTCGAGCGATTAAGAA..................................................................... 19 2 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................................TCGATCTGTTTGACCTGTAA................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TTAGGAAGGAAGTCTAAAGAC........................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................ACTTTATCTGTCTAGCGACT.......................................................................... 20 3 11 0.64 7 0 0 0 0 3 1 1 1 1
...............................................................................................................................................................................TTAATAAATTAGTGAGGAAGG....................................................... 21 2 2 0.50 1 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:2032381-2032631 + dvi_15238 ATATTTCCAAGTA--ATCGATAAAAATCGATATCGAAA----------------------------------------C--T--------------------------------------------------------------------------CTGTTT-TTTG---------------------------------------------------------AACAATTTTGATAAAT-ATC--AAGAGCTA-----------------------------------------------------------------------GACAAA--CTGGACATTTATCTTCTAGAATAGT---------------ATATATA---TTTG-CATCTCAACATGAT--------------------T-----------------------------------CAA------------------------------------------------------------------------------------A-----------ATTGAGATTGAGGTAGTTTCTTG-GAATAGA-AAGATCGCTAATTATTTTATCAATCCTTCCTT---------------------------------------CA---GATTTCTGCAGCAGCATGGCTTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACCCTTGCTG-------------------------------T----TCAGGGAGAAGA
droMoj3 scaffold_5820:650-907 + TATTTTTTCGATA--------------------------------------------------------AATTATCCGATAACTTTTTTATCGA---------------------------------------------------------------------------GAATAATCGAAAAATTTGTAAAAAAC-------------------GCAT---TTCAAG--------------------------------------------------------------------------------------------------------TACTAGAGACTTGTGCTTTGGAATG-TACATATTCACCATACAT---ATTCA---G-CATATCATTACGCT--------------------C-----------------------------------TGA------------------------------------------------------------------------------------A-----------AGCTTCATTAAGATCGTATGCTA-CAAAAGA-A----------------------------------------------ATTATTCAACAAATAAATTCTCATAATATTGCTCACACTGCAGCGCAGCCCAAGCACAGTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACTG-------------------------------C----GCAGTTAGCAGA
droGri2 scaffold_15203:4737139-4737363 - TATTTTATCGATA--------------------------------------------------------ACTGCCTCCGTTTCTCGATTATCGA----------T-------------------------------GCATT---------------CAGAT--TTCCG--A---------------------------TAGCAATAA-------A---TGCC--ACAA-------------TTT--TAAAGGCAGAATTT-----------------------TCTAC------------------------------------------------------------TTAATATATA---------------ATATGCA---ATTG-CATA------TTATTGACCAA-----------------------------------------------------CTGCCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------ATTGAATCAAGATCGGATTGGAAAGAGCCAAGTTATTGTTATCTTATGGATCTCATTTCCATCAGCAGCCGCAAGCAT----------------------------------------------------------------------------------------CAATATGC
droWil2 scf2_1100000008838:866-1038 - GTGTTTTTTATTA--------------------------------------------------------CCCGGGAAAA--A----------------------------------------------------------TAAAGTATGAAA-ACCATGAGG-ATC-------------------------G--------------------------------GACCACTATATCATAT-AGCTC----------------------------------------------------ACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAACTAGAAGAAACATTTTCATAAAAATCGGTGTATGTGGTTGTAAAATAATTGTAAA--------------------------------------------------------------------------------------------------------------------------------ATAGAAGTAAAATTGTTTTGTTTGTATATT-GATAAATTGC
dp5 Unknown_group_704:7303-7437 - ATTTTGCCACGCG--CTCTG-------------------------------------CCGCCCCCACAAAGGACGAAAA--T--------------------------------------------------------------------------CTGTGG-CACT---------------------------------------------------------GACAACTTTAAAA-AT-ATT--AGAATCCC-----------------------------------------------------------------------AAAAAC--GCAGAATTCTATCTTCCAGA-------------------------------------------------------------------------------------------------------------CTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------TCTGAATCTGAATCG--------------------------------------------------------------------------------------------------------------------------------GATCA----------------------TTAT
droPer2 scaffold_3:5913894-5913957 + AAACCCCTTTTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTCCTACAGCAACATGGCTTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACCCTTACTC-------------------------------T----TTAGAGAAAAGA
droAna3 scaffold_13137:695763-695883 + ATAATACCC---A--AGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAA----------------------------------------------GATGTTGAAAAAG-TTT--TGATGCCAAACTAT-----------------------TTTCC--C-------ATA-----------------------------------------TAT-ATCTAGGAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATTCAGTCAAATCTGCACAT-----------------TTTAAGATAAGTTAA--------------------------------------------------------------------------------------------------------------------------------AGATAGT----------------------TT
droBip1 scf7180000396710:212557-212684 - ATATTTGCC--------------------------------------------------------ACCCAAAATTCCGA--ATTTCTGTAGCTC---------------------------------------------------------------------------TAGTACTGGAAGGT---------------------------------------------TTTTTGAAAAAC-TTT--TGATGCCAAA-----------------------------------------------------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCTATGTTTAATATACATATAACTGAAAAA--CAA-------------------------------------ATTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAAATCG
droKik1 scf7180000302696:225326-225450 + AAAATCGAT-------------------------------------------------------------------------------------------------------------------------------TAATA---------------CAGTTT-TTTG---------------------------------------------------------AGTAATTGTAAAATAT-ATC--AAAAGACA----------------------GAAAATATATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATTTATAATTTA-------------------------------------------------------------TAATTTATATATATTAAAAAGGCAAAA-----------------------------------------------------------------------------------------TAT-------------------------------------ATAAA-----AA-----------------------------------------------------------------------------------------------------------------------------------TAAAA----------------------TTAA
droFic1 scf7180000454106:2301617-2301695 - TCGTTATGC---GTCTCCTT-------------------------------------GATACTTTACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCCTACAGCAGCACGGCTTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCCCCTTGTTG-------------------------------T----TCCGGGACAAGG
droEle1 scf7180000489979:2442-2616 + ATTGCAGGT---A--GTATATAAAAATAATT---ATAACTTATTATTATTATTATTTTTTC----ACCGAATTTCGCGT--ATTTTAAAAGCTGTTGACCTGAATCTTTTCAAATCGTATTTTTTAATATATATCATAATTAA--TATGAAATATCATGCCA-ATA-------------------------G--------------------------------GAAGTCTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAT------------------------------------------------------------------------------------------------AAATCCT----------------------CC
droRho1 scf7180000775787:585-755 - AAACGCCCC--------CTT-------------------------------------TAACGCCCACAA----TCGCTT----------------------------------------------------------------------------------A-TAT-----------------------------------------------------------ACGATTTTAAAA-AT-TTA--AATATTTC-----------------------------------------------------------------------GGAAAA--GTAAAAATTC-----------------AGTTTTATTGTGT--TTA--------------TCAATACCTA--------------------T-----------------------------------CGAAATGTAGAAGAAATTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAATCGGAACAT-----------------TCGTTAATAAGTTAT---------------------GCGTGATCAAT------------------------------------------------------------------------------------------------GTTTCTA----------------------TC
droBia1 scf7180000301518:1163233-1163401 - ATTGCAGGT---A--GTATA--AAAGTCGGA----------------------------------------------AA----------------------------------------------------------------------------CAGGCGG-ATC-------------------------G--------------------------------GAAAACTGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTATAGCTCTTATAGGAACCAACGGGGGAAAAAATAAACTAAAATTATAACCTTCTAAGCATGGAAATAACATTTTTTAATTAATTCTGAATTTCGAGATAATTTTT-------T----TAAGTCGGACGA
droTak1 scf7180000415286:146077-146262 - GTATTTAAAAATA--ATATATAAAAATCAAAATTAAAA----------------------------------------------------------------------------------------------------------------------------------------C----------------TGAAG----------------------------GAAA---ATAAAATCT-CATTT----------------------------------------------------AAGAAATATCAATAC--TCAAAAATAA------TACTAAAAATTAATATTTTTGAATA-TTCAAATTTCCTATTC--CTG--------------AAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAAAACAAAGCAATATCTTGTAAATTTA-AATATTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------GAT-------------------TATTTTG----------------------TC
droEug1 scf7180000407642:58571-58793 - ATCCTGCCACGCC--CACTC-------------------------------------TAACGCCCACAAATCGCGAAGA--A--------------------------------------------------------------------------TTGAAATCGCTG--AAATC----------------TCAGGAACTA-------------------TT--ACAG-------------CTA--GAAAGTTGAAATTCAGTATGTATAATCTTGGTGGAT-------------------------------------------------------------------------------------------AT---AAATATTAGAAGCTGTAGTATTCC---------------------------------------------------------TT-----------------------------AAACAGTATAGATTGAGTAACTGAAGAGTGATTACATAAAGATCATATATTTTTCAATTA-------------------------------------------------------------CACCTTATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTATACAG
dm3 chr2R:3890761-3890908 + TTTCAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGAATAA-------A---TATT--GAAATTTGTCAAA-A----------------------------------------------------------------------------------------------CAACAGGGTTATCGCCTAGTAAAGT---------------ATATTCA---TTTA-AGCTACAATATTATTAAATGTTTAACTACGTCGATGAACTTGAGTAAAGAAATCGTTTTAAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCT------------------------------------------------------------------------------------------------------TA----------------------TAAA
droSim2 2r:2576184-2576364 + CTAACGCCC--------------------------------------------------------ACAATCCGCTCAAA--A--------------------------------------------------------------------------CTGCAA-CACCCTCACTTC----------------TGCAAAATGTTTTGATTTTGTTAATAT---TTGAGATTTTGCAAAATGT-GT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATATTTGTAT--------------------------------------------TTTTATTTATATTTTATTATTATAACTTTACTCAGGTAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCATCAAAACTTTT----------------------TT
droSec2 scaffold_60:71236-71358 + ATGTTGCCACGTC--CACTG-------------------------------------TAACGCCCACCAACCGCAAATA-----------------------------------------------------------------------------CTGGCA-CGCC---------------------------------------------------------CACAGTTTTGACAAAT-TTT--TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTCTCG-TAAATTTCTATAAAATTTGCCTCTCAAAACTCGCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATT
droYak3 2R:695120-695241 + GTAACATAA---T--TACTG--AAAAACGAA----------------------------------------------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTATGCCCAAAATCTGTAGATTTATGCATTCTTTTTACAGAAAT-TTA-------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACACGAAATAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTTCTTTTTTA-------------------------------TATCTTATATTATTTGC
droEre2 scaffold_4512:825051-825232 - ATAATTCCC--------------------------------------------------------ACTAATCACGCAAA--C--------------------------------------------------------------------------TAGTCA-TACTC--AATTC----------------TTAAGAACAATTTTAC-------ATAT---TTTAGGCTTTACAAAAATTTTTTTT----------------------------------------------------ACAAAATTTCAATCCACTCT--------------------------------------------------TGTCTAA---TATCG---G-CATGTAAATATGTT--------------------T-----------------------------------TTA------------------------------------------------------------------------------------A-----------TTTATATTGAACAATGCCTTTTG-CAATAAACAAGTTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG----------------------CTTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATATTTCCAAGTA--ATCGATAAAAATCGATATCGAAA----------------------------------------C--T--------------------------------------------------------------------------CTGTTT-TTTG---------------------------------------------------------AACAATTTTGATAAAT-ATC--AAGAGCTA-----------------------------------------------------------------------GACAAA--CTGGACATTTATCTTCTAGAATAGT---------------ATATATA---TTTG-CATCTCAACATGAT--------------------T-----------------------------------CAA------------------------------------------------------------------------------------A-----------ATTGAGATTGAGGTAGTTTCTTG-GAATAGA-AAGATCGCTAATTATTTTATCAATCCTTCCTT---------------------------------------CA---GATTTCTGCAGCAGCATGGCTTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACCCTTGCTG-------------------------------T----TCAGGGAGAAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................CTGGACATTTATCTTCTAGAATAGT---------------AT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
...TTTCCAAGTA--ATCGATAAAAATCGATAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.102000000000000000000000000000000110000000000000000000000000000000
...TTTCCAAGTA--ATCGATAAAAATCGATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102000000000000010000000000100000000000000000000000000000000000000
.........AGTA--ATCGATAAAAATCGATATCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
droMoj3
TATTTTTTCGATA--------------------------------------------------------AATTATCCGATAACTTTTTTATCGA---------------------------------------------------------------------------GAATAATCGAAAAATTTGTAAAAAAC-------------------GCAT---TTCAAG--------------------------------------------------------------------------------------------------------TACTAGAGACTTGTGCTTTGGAATG-TACATATTCACCATACAT---ATTCA---G-CATATCATTACGCT--------------------C-----------------------------------TGA------------------------------------------------------------------------------------A-----------AGCTTCATTAAGATCGTATGCTA-CAAAAGA-A----------------------------------------------ATTATTCAACAAATAAATTCTCATAATATTGCTCACACTGCAGCGCAGCCCAAGCACAGTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACTG-------------------------------C----GCAGTTAGCAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................TCAAG--------------------------------------------------------------------------------------------------------TACTAGAGACTTGTGCTTTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................262021.4542942900000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCATAATATTGCTCACACTGCAGCGC...................................................................................................................................................................................................................................................................28200.5010900010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCATAATATTGCTCACACTGC........................................................................................................................................................................................................................................................................23200.255500000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCATAATATTGCTCACACTGCAG......................................................................................................................................................................................................................................................................25200.153300000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTTACTG-------------------------------C----GCAG........21200.102200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCGCAGCCCAAGCACAGTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C.........................................................25110.091000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAATAAATTCTCATAATATTGC.................................................................................................................................................................................................................................................................................26200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGCTCACACTGCAGCGCAGCC...............................................................................................................................................................................................................................................................25200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATTGCTCACACTGCAGC.....................................................................................................................................................................................................................................................................21200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATAATATTGCTCACACTGCAGCGCA..................................................................................................................................................................................................................................................................27200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTCATAATATTGCTCACACTG.........................................................................................................................................................................................................................................................................24200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCATAATATTGCTCACACTGCAGCGCA..................................................................................................................................................................................................................................................................29200.051000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCATAATATTGCTCACACTGCA.......................................................................................................................................................................................................................................................................24200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCATAATATTGCTCACACTGCAGCG....................................................................................................................................................................................................................................................................27200.051000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCATAATATTGCTCACACTGCAGC.....................................................................................................................................................................................................................................................................26200.051000010
.........................................................................................................................................................................................................................T---TTCAAG--------------------------------------------------------------------------------------------------------TACTAGAGACTTGTGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCTCATAATATTGCTCACACTGC........................................................................................................................................................................................................................................................................27200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCATAATATTGCTCACACTGCA.......................................................................................................................................................................................................................................................................25200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATAATATTGCTCACACTGCAG......................................................................................................................................................................................................................................................................24200.051100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-CAAAAGA-A----------------------------------------------ATTATTCAACAAAT...................................................................................................................................................................................................................................................................................................24200.051000010
............................................................................................................................................................................................AAAAAAC-------------------GCAT---TTCAAG--------------------------------------------------------------------------------------------------------TACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACACTGCAGCGCAGCCCAAGC..........................................................................................................................................................................................................................................................23200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATAATATTGCTCACACTG.........................................................................................................................................................................................................................................................................21200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCATAATATTGCTCACACTG.........................................................................................................................................................................................................................................................................23200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATAATATTGCTCACACTGCAGC.....................................................................................................................................................................................................................................................................25200.051100000
..................................................................................................................................................................................................................................G--------------------------------------------------------------------------------------------------------TACTAGAGACTTGTGCTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
........................................................................................................................................................................................................................AT---TTCAAG--------------------------------------------------------------------------------------------------------TACTAGAGACTTGTGCTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCACACTGCAGCGCAGCCCA.............................................................................................................................................................................................................................................................21200.051100000
...................................................................................TTTTTTATCGA---------------------------------------------------------------------------GAATAATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CAAAAGA-A----------------------------------------------ATTATTCAACA......................................................................................................................................................................................................................................................................................................20200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATAATATTGCTCACACTGC........................................................................................................................................................................................................................................................................22200.051100000
droGri2
TATTTTATCGATA--------------------------------------------------------ACTGCCTCCGTTTCTCGATTATCGA----------T-------------------------------GCATT---------------CAGAT--TTCCG--A---------------------------TAGCAATAA-------A---TGCC--ACAA-------------TTT--TAAAGGCAGAATTT-----------------------TCTAC------------------------------------------------------------TTAATATATA---------------ATATGCA---ATTG-CATA------TTATTGACCAA-----------------------------------------------------CTGCCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------ATTGAATCAAGATCGGATTGGAAAGAGCCAAGTTATTGTTATCTTATGGATCTCATTTCCATCAGCAGCCGCAAGCAT----------------------------------------------------------------------------------------CAATATGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GTGTTTTTTATTA--------------------------------------------------------CCCGGGAAAA--A----------------------------------------------------------TAAAGTATGAAA-ACCATGAGG-ATC-------------------------G--------------------------------GACCACTATATCATAT-AGCTC----------------------------------------------------ACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAACTAGAAGAAACATTTTCATAAAAATCGGTGTATGTGGTTGTAAAATAATTGTAAA--------------------------------------------------------------------------------------------------------------------------------ATAGAAGTAAAATTGTTTTGTTTGTATATT-GATAAATTGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
ATTTTGCCACGCG--CTCTG-------------------------------------CCGCCCCCACAAAGGACGAAAA--T--------------------------------------------------------------------------CTGTGG-CACT---------------------------------------------------------GACAACTTTAAAA-AT-ATT--AGAATCCC-----------------------------------------------------------------------AAAAAC--GCAGAATTCTATCTTCCAGA-------------------------------------------------------------------------------------------------------------CTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------TCTGAATCTGAATCG--------------------------------------------------------------------------------------------------------------------------------GATCA----------------------TTATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------TCTGAATC......................................................................................................................................................................16180.3970000000430
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------TCTGAATC......................................................................................................................................................................15200.2040000000310
..................................................................CAAAGGACGAAAA--T--------------------------------------------------------------------------CTGTGG-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000030
...............................................................CCACAAAGGACGAAAA--T--------------------------------------------------------------------------CTGTGG-C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000030
................................................................CACAAAGGACGAAAA--T--------------------------------------------------------------------------CTGTGG-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000100
droPer2
AAACCCCTTTTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTCCTACAGCAACATGGCTTCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACCCTTACTC-------------------------------T----TTAGAGAAAAGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
ATAATACCC---A--AGCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAA----------------------------------------------GATGTTGAAAAAG-TTT--TGATGCCAAACTAT-----------------------TTTCC--C-------ATA-----------------------------------------TAT-ATCTAGGAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATTCAGTCAAATCTGCACAT-----------------TTTAAGATAAGTTAA--------------------------------------------------------------------------------------------------------------------------------AGATAGT----------------------TTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATATTTGCC--------------------------------------------------------ACCCAAAATTCCGA--ATTTCTGTAGCTC---------------------------------------------------------------------------TAGTACTGGAAGGT---------------------------------------------TTTTTGAAAAAC-TTT--TGATGCCAAA-----------------------------------------------------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCTATGTTTAATATACATATAACTGAAAAA--CAA-------------------------------------ATTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAAATCGSizeHit CountTotal NormTotal
No Reads
droKik1
AAAATCGAT-------------------------------------------------------------------------------------------------------------------------------TAATA---------------CAGTTT-TTTG---------------------------------------------------------AGTAATTGTAAAATAT-ATC--AAAAGACA----------------------GAAAATATATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATTTATAATTTA-------------------------------------------------------------TAATTTATATATATTAAAAAGGCAAAA-----------------------------------------------------------------------------------------TAT-------------------------------------ATAAA-----AA-----------------------------------------------------------------------------------------------------------------------------------TAAAA----------------------TTAASizeHit CountTotal NormTotal
No Reads
droFic1
TCGTTATGC---GTCTCCTT-------------------------------------GATACTTTACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCCTACAGCAGCACGGCTTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCCCCTTGTTG-------------------------------T----TCCGGGACAAGGSizeHit CountTotal NormTotal
No Reads
droEle1
ATTGCAGGT---A--GTATATAAAAATAATT---ATAACTTATTATTATTATTATTTTTTC----ACCGAATTTCGCGT--ATTTTAAAAGCTGTTGACCTGAATCTTTTCAAATCGTATTTTTTAATATATATCATAATTAA--TATGAAATATCATGCCA-ATA-------------------------G--------------------------------GAAGTCTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAT------------------------------------------------------------------------------------------------AAATCCT----------------------CCSizeHit CountTotal NormTotal
No Reads
droRho1
AAACGCCCC--------CTT-------------------------------------TAACGCCCACAA----TCGCTT----------------------------------------------------------------------------------A-TAT-----------------------------------------------------------ACGATTTTAAAA-AT-TTA--AATATTTC-----------------------------------------------------------------------GGAAAA--GTAAAAATTC-----------------AGTTTTATTGTGT--TTA--------------TCAATACCTA--------------------T-----------------------------------CGAAATGTAGAAGAAATTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAATCGGAACAT-----------------TCGTTAATAAGTTAT---------------------GCGTGATCAAT------------------------------------------------------------------------------------------------GTTTCTA----------------------TCSizeHit CountTotal NormTotal
No Reads
droBia1
ATTGCAGGT---A--GTATA--AAAGTCGGA----------------------------------------------AA----------------------------------------------------------------------------CAGGCGG-ATC-------------------------G--------------------------------GAAAACTGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTATAGCTCTTATAGGAACCAACGGGGGAAAAAATAAACTAAAATTATAACCTTCTAAGCATGGAAATAACATTTTTTAATTAATTCTGAATTTCGAGATAATTTTT-------T----TAAGTCGGACGASizeHit CountTotal NormTotal
No Reads
droTak1
GTATTTAAAAATA--ATATATAAAAATCAAAATTAAAA----------------------------------------------------------------------------------------------------------------------------------------C----------------TGAAG----------------------------GAAA---ATAAAATCT-CATTT----------------------------------------------------AAGAAATATCAATAC--TCAAAAATAA------TACTAAAAATTAATATTTTTGAATA-TTCAAATTTCCTATTC--CTG--------------AAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAAAACAAAGCAATATCTTGTAAATTTA-AATATTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------GAT-------------------TATTTTG----------------------TCSizeHit CountTotal NormTotal
No Reads
droEug1
ATCCTGCCACGCC--CACTC-------------------------------------TAACGCCCACAAATCGCGAAGA--A--------------------------------------------------------------------------TTGAAATCGCTG--AAATC----------------TCAGGAACTA-------------------TT--ACAG-------------CTA--GAAAGTTGAAATTCAGTATGTATAATCTTGGTGGAT-------------------------------------------------------------------------------------------AT---AAATATTAGAAGCTGTAGTATTCC---------------------------------------------------------TT-----------------------------AAACAGTATAGATTGAGTAACTGAAGAGTGATTACATAAAGATCATATATTTTTCAATTA-------------------------------------------------------------CACCTTATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTATACAGSizeHit CountTotal NormTotal
No Reads
dm3
TTTCAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGAATAA-------A---TATT--GAAATTTGTCAAA-A----------------------------------------------------------------------------------------------CAACAGGGTTATCGCCTAGTAAAGT---------------ATATTCA---TTTA-AGCTACAATATTATTAAATGTTTAACTACGTCGATGAACTTGAGTAAAGAAATCGTTTTAAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCT------------------------------------------------------------------------------------------------------TA----------------------TAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
No Reads
droSim2
CTAACGCCC--------------------------------------------------------ACAATCCGCTCAAA--A--------------------------------------------------------------------------CTGCAA-CACCCTCACTTC----------------TGCAAAATGTTTTGATTTTGTTAATAT---TTGAGATTTTGCAAAATGT-GT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATATTTGTAT--------------------------------------------TTTTATTTATATTTTATTATTATAACTTTACTCAGGTAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCATCAAAACTTTT----------------------TTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCA...................................252014.252850000002850000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATT......................................25111.0011000000000011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATT......................................24203.9579000000907000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTC....................................24203.0561000000015415000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTT.....................................25202.3547000000089300000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------AT.......................................23201.1523000000094100000000
..............................................................................................................................................................................................................TTTTGTTAATAT---TTGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTACTCAGGTAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACG.............................................................................................................................................................................2811.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTCAGGTAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACG.............................................................................................................................................................................2611.00100000010000000000
......................................................................................................................................................................................................TGTTTTGATTTTGTTAATAT---TTGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGTAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGA..........................................................................................................................................................................2511.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTTTACTCAGGTA.................................................................................................................................................................................................................................................................................................................................................................................1611.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTACTCAGGTAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATG...................................................................................................................................................................................2311.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCAGGTAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCG...........................................................................................................................................................................2611.00100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCG...........................................................................................................................................................................17200.9018000000200016000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATT......................................20200.6513000000000013000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------AT.......................................21200.6012000000000012000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTC....................................26200.501000000006040000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCATC.................................29200.30600000005010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCATC.................................27200.30600000000600000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACG.............................................................................................................................................................................17200.25500000000005000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCA...................................27200.25500000000050000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCATC.................................26200.20400000000004000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCAT..................................28200.15300000002010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATT......................................18200.15300000000003000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCA...................................26200.15300000002001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCG...........................................................................................................................................................................18200.10200000000002000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATT......................................21200.10200000011000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------A........................................22200.10200000000002000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCA...................................20200.10200000000002000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAAC..............................................................................................................................................................................15200.10200000000002000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------A........................................16200.10200000000002000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGA..........................................................................................................................................................................19200.10200000000002000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATT......................................23200.10200000000200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------A........................................18200.10200000000002000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCA...................................18200.10200000000002000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCAA..................................26200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCATC.................................28200.05100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTC....................................25200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCAC..................................26200.05100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCATCA................................25200.05100000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCAT..................................26200.05100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTTCG...................................27200.05100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCG...........................................................................................................................................................................19200.05100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------ATTT.....................................21200.05100000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCGAACGCGAA--------------------------------------------------------------------------------------------------------------------------------A........................................19200.05100000000001000000
droSec2
ATGTTGCCACGTC--CACTG-------------------------------------TAACGCCCACCAACCGCAAATA-----------------------------------------------------------------------------CTGGCA-CGCC---------------------------------------------------------CACAGTTTTGACAAAT-TTT--TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTCTCG-TAAATTTCTATAAAATTTGCCTCTCAAAACTCGCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GTAACATAA---T--TACTG--AAAAACGAA----------------------------------------------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTATGCCCAAAATCTGTAGATTTATGCATTCTTTTTACAGAAAT-TTA-------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACACGAAATAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTTCTTTTTTA-------------------------------TATCTTATATTATTTGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................TTA-------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACACGAAATAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C............................................................20200.05101000000000
...............TACTG--AAAAACGAA----------------------------------------------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTATGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
droEre2
ATAATTCCC--------------------------------------------------------ACTAATCACGCAAA--C--------------------------------------------------------------------------TAGTCA-TACTC--AATTC----------------TTAAGAACAATTTTAC-------ATAT---TTTAGGCTTTACAAAAATTTTTTTT----------------------------------------------------ACAAAATTTCAATCCACTCT--------------------------------------------------TGTCTAA---TATCG---G-CATGTAAATATGTT--------------------T-----------------------------------TTA------------------------------------------------------------------------------------A-----------TTTATATTGAACAATGCCTTTTG-CAATAAACAAGTTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG----------------------CTTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/16/2015 at 09:20 PM