ID:

dvi_15195

 Coordinate:

scaffold_13047:1811527-1811677 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.1 -17.7 -17.7 -17.7

Flybase annnotation

CDS [Dvir\GJ23499-cds]; exon [dvir_GLEANR_8847:3]; intron [Dvir\GJ23499-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TATGGCAGAATATTCTGTTTAAAACTCGACGCTTAAAAGTTTCTTTATTCTCACATAAAAAAGGCAAATGCTTACAAGGGTATTTTCTATCTCGGCTTACTATCTCGGTATTTATTTCACTATATTATTAGCAATACCATGCTGAATATTTTATAAAAGCTCAAATTGAATAAATATGTCGTCCGTCTACTGCCTCGCTAGGTCGACGGAAAAACAATTAAGGCGCAAATTTGGGATACGGCAGGCCAGGA
**************************************************....................((......((((..........((((...........((((((((((....((((..((((((......))))))))))..................)))))))))))))).........)))).....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 M047
female body
 SRR060681
Argx9_testes_total
 M061
embryo
 SRR060663
160_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060679
140x9_testes_total
 V047
embryo
 SRR060682
9x140_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060665
9_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060670
9_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR1106723
embryo_12-14h
 SRR1106726
embryo_14-16h
 SRR060678
9x140_testes_total
 M027
male body		 SRR060668
160x9_males_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
...........................................................................................................................................................................................................................AAGGCGCAAATTTGGGATACGGC......... 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GTCTACGGCCTTGGTAGGT................................................ 19 3 6 1.50 9 0 0 0 0 0 0 8 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTCGACGGAAAAACAATTAAGGCG.......................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AAATATGGGATACGGCAGGCCCG.. 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AAACAATTAAGGCGCAAA...................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GCAAATTTGGGATACGGC......... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TCGACGGAAAACCAATAAGGGC........................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CTACTGCCTCGCTAGGTCGACG........................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GGAAAAACAATTAAGGCGCAAA...................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TCGACGGAAAAACAATTAAGGCGCAAA...................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTCGACGGAAAAACAATTAAGGCGCAA....................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTAAGGCGCAAATTTGGGC............... 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................ATTTGGGATACTGCGGGCCAGGA 23 2 2 1.00 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GTCGTCCGTCTACTGCCTCGCTAG.................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................GGTCGACGGAAAAACAATTAA.............................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TTGGGATACGGCAGGCCA... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AAGGCGCAAATTTGGGATACG........... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AATTTGGGATACGGCAGGCCAG.. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AAACAATTAAGGCGCAAATTTGGGAT.............. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CGACGGAAAAACAATTAAGGCGC......................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GGCGCAAATTTGGGATACGGC......... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AATTTGGGATACGGCAGGCC.... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GCGCAAATTTGGGATACGGCAGGAC.... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GGCGCAGATTTGGGATACTGCGGGCCA... 27 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................AAAACAATTAAGGCGCAAATTTGGG................ 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AATTAAGGCGCAAATT.................... 16 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................GTCTCTTGCCTCGCTCGGTC............................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................GGTAGGTCGACGGCAAAA..................................... 18 2 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GTAGACTGCCTTGCTAGGT................................................ 19 3 12 0.17 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................GTATACGGCCTTGCTAGGT................................................ 19 3 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AGATTTGGGATACTGCGGGC..... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................TAATAGCTCAAATTGAAAAAAAA........................................................................... 23 3 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GTCGACGGCCTCGGTAGGT................................................ 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................TAATAGCTCAAATTGCATAA.............................................................................. 20 2 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...........GTACTGTTTAAACCTCGA.............................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATACCGTCTTATAAGACAAATTTTGAGCTGCGAATTTTCAAAGAAATAAGAGTGTATTTTTTCCGTTTACGAATGTTCCCATAAAAGATAGAGCCGAATGATAGAGCCATAAATAAAGTGATATAATAATCGTTATGGTACGACTTATAAAATATTTTCGAGTTTAACTTATTTATACAGCAGGCAGATGACGGAGCGATCCAGCTGCCTTTTTGTTAATTCCGCGTTTAAACCCTATGCCGTCCGGTCCT
**************************************************....................((......((((..........((((...........((((((((((....((((..((((((......))))))))))..................)))))))))))))).........)))).....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 V053
head
.....................................................................CGAGTGTTCCCAGAAAAGG................................................................................................................................................................... 19 3 10 0.20 2 2 0
..........................................................................................................................................................................GTTTATACAGGAGGCAGTT.............................................................. 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:1811477-1811727 - dvi_15195 TATGGCAGAAT-ATTCTGTT----TAAAACT-------------------------------------------------------------------------------------------CGACGC---TTA---AA------------------------------------------------------------------AGTTTCTTTA-TTCTCACATAAAAAAGGCAAA----------------TGCTTACAAGGGTATTTTC--------------------------------------------------------------------------------------------TATCTCGGCTTAC--------------TATCTCGGTATTTATTT--CACTATATTATTAGCAATACCATGCTGAATATTTTATAAAAGCTCAAA------TTGAATAAATATGTCGTCCGTCTACTGCCTCGCTAGGTCGACGGAAAAACAATTAAGGCGCAAATTTGGGATACGGCAGGCCAGGA-----------------
droMoj3 scaffold_6540:3737425-3737556 - TATTTTCTT-A----------------------------------------------------------------------------------------------------------------AAATATATGTA---ACCTTGTT------------------AAATCAATTTCATATGC--------------------------------------------------------------------------------AATGCAA-----------TTTAAACTCA----------------------------------------------------------------------------------------------------TATTTT----GTTTCTCTC-----------------------------------------------------------------------------------------TAAGGTGGATGGTAAAACAATTAAGGCGCAAATTTGGGATACAGCCGGTCAGGA-----------------
droGri2 scaffold_14906:8644122-8644180 - CCGCGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTCGATGGTAAAACAATTAAGGCGCAAATTTGGGATACGGCCGGACAAGA-----------------
droWil2 scf2_1100000009814:320-476 + TTTTTTTCC-TATGC-----TAAG-----ATTGTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTCATTCGCAAACATTAACCTTTTTAGCTTAAACGTTTTTCCATTTTGATGGCTATAGGTAAGGAAAGAGTTACCATAAGTTAGTTAGCCCCGGCCCTCT-------------------GGTTTTTATT-----------------------------------------------------------------------------------------------------------------------------TAAATTGACTGTTAGAAA-----------------
dp5 2:19405844-19405897 - CCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCGATGGTAAGACTATCAAAGCGCAAATCTGGGATACGGCTGGCCAGGA-----------------
droPer2 scaffold_3:2153765-2153818 - CCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCGATGGTAAGACTATCAAAGCGCAAATCTGGGATACGGCTGGCCAGGA-----------------
droAna3 scaffold_13260:1999012-1999177 - TGGCACAAC-CTTGC-----TATTTTA------------------------------------------------------------------------------------------------AAAGATGCTTG---GGGCTGTTTCCAACATTTTTATTAAAAAATT----------------------GATTCGATGGTGAAACTCTCATAAG---------------------------------------GATCGGCCAAGTATATTC--------------------------------------------------------------------------------------------GATAT--------------AAGCTGCTATTAGCTGCTATTATTATATA-CATAATATAAGCA---------------------------------------------------------------------------------------------------------------AGAGTATACTGAA-----------------
droBip1 scf7180000396708:4202845-4202936 + AACTTTCTC-ATTCA--------------------------------------------------------------------------------------------------------------------TCT--------------------------------------------GCTTTCTCCTCCCAACCAC-------------A----------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGTCGATGGTAAAACAATTAAAGCGCAAATCTGGGATACGGCCGGACAGGA-----------------
droKik1 scf7180000301583:34352-34595 + TATTTCAGAAT-TTT---------------------GGTTTTAGTTTTATGAAAATCGGACGACTATATCTTATAACTGCCATAAGAACAATCGGAAAGTTAATAGAAAAAAATCAAAACTTCTTTGTTTTCCAACG------------------------------TATTTTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACTCTGAGATATAAGCCTATTTTATTATT-----------------TTAGA------ATTTTGGTAAACATTTTATGAA------AATCGGAT------AACTATATCATAGCTCT-------------------------------------------ATAGAAACGATCGGTCAATGTAGAGATAATGTAAAGC
droFic1 scf7180000453955:3880-4003 - ATAGAAAAGTC-GT----------------------------------------------------------------------------------------------------CGTAGCTTCGATGTTGTTTAGCC------------------------------------------------------------------------TTTGTG-TATTCTGTTCGAAATATTTGA----------------TGACTGCAAGGGTA---------------------------------------------------------------------------------------------TATAAGCTTCGGCTTGCTGAAGCTAGCTTCCTTTCTTGTT--------------------------------------------------------------------------AT---------------------------------------------------------------------AGTAT-----------------
droEle1 scf7180000491111:108097-108239 + AATGGGTACTC-ATATAATT----CTAAATT---TAGATTTTTAA-----------------------------------------------------------------------------------TTTTT----------------------------------------------------------------------------------------GC------------AA----------------TAGCTTCAAGGGTA---------------------------------------------------------------------------------------------TATAAACTTCGGCTTGCCCAAGTTTGCTTTTCTTCTTGTTTTTTATTT--GGCTTCGCTATT------ATGCTTGTGAGTATTTTG---------------------------------------------------------------------------------------------------TATAA-----------------
droRho1 scf7180000779509:15819-15956 - ATTCTGCATTT-TTT---------------T-------------------------------------------------------------------------------------------CATTGG---TTG---AA------------------------------------------------------------------TTTTTATTTG-GATTCTTGAAAAAAATGTGAGTTTTTGCTGATACA----------------ATTTTCGGCTTGATATGCTTATCTCATGAAA--------------------------------------------------------------------------T-------------------------------------AC------------------------CAAGGCCACAACAA------ATGCAAAA------TATTTC---------------------------------------------------------------------ATCAA-----------------
droBia1 scf7180000297212:49517-49669 + CATAATAAAAT-AATATG----------------------------------------------------------------------------------------GAACAAATGAAAGCTTCTTTGATTCTTGACT-----------------------------------------A-------------------------------TACTA-TACTATAT-----------------ACTATATACA----------------TATATATACTATATATACATATATACTATAC--------------------------------------------------------------------------TATTACGAATATAATTAT----------------------------------------------TT--GTATTTTGAA------AATTAGACTTAAA-----TT---------------------------------------------------------------------TATAT-----------------
droTak1 scf7180000414642:7761-7914 - TAAAAAGT--------------------------AGGCTTTTTGA-----------------------------------------------------------------------------------TTTTTGACA-----------------------------------------A-------------------------------TGTAAAAACAACAT-----------------TTTAGGTAGGCATACCTGCAAGGGTA---------------------------------------------------------------------------------------------TATAAACTTCGGCTGGCCGAAGTTAACTTCCTTTCTTTTTTTTCAATATTTT------------------------CAATATTTTATCAA------AATCGAAC------TATTAT---------------------------------------------------------------------CTCAT-----------------
droEug1 scf7180000409542:195899-195950 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCGATGGCAAAACAATTAAAGCGCAAATCTGGGATACGGCTGGCCAGGA-----------------
dm3 chr3L:21325661-21325767 + AATAATAAA-TTAAA-----TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTCAATTATAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACCAA------CAGAACAAAGTGGTGGT------------------CGTCGATGGAACGCGCGTCAAGCTGCAAATCTGGGACACAGCTGGTCAGGA-----------------
droSim2 3l:20860015-20860097 + TTATAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACCAA------CAGAACAAAGTGGTGGT------------------CGTCGATGGAACGCGCGTCAAGCTGCAAATCTGGGACACAGCTGGTCAGGA-----------------
droSec2 scaffold_11:1262716-1262798 + TTATAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACCAA------CAGAACAAAGTGGTGGT------------------CGTCGATGGAACGCGCGTCAAGCTGCAAATCTGGGACACAGCTGGTCAGGA-----------------
droYak3 3R:5725502-5725553 + A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCGATGGCAAAACAATTAAAGCGCAAATCTGGGATACGGCCGGCCAGGA-----------------
droEre2 scaffold_4770:4713677-4713756 - TGTTTCGTC-CTCCT-----TGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACCCA-------------T----------------------------------------------------------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGGTCGATGGCAAAACAATTAAAGCGCAAATCTGGGATACGGCCGGCCAGGA-----------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TATGGCAGAAT-ATTCTGTT----TAAAACT-------------------------------------------------------------------------------------------CGACGC---TTA---AA------------------------------------------------------------------AGTTTCTTTA-TTCTCACATAAAAAAGGCAAA----------------TGCTTACAAGGGTATTTTC--------------------------------------------------------------------------------------------TATCTCGGCTTAC--------------TATCTCGGTATTTATTT--CACTATATTATTAGCAATACCATGCTGAATATTTTATAAAAGCTCAAA------TTGAATAAATATGTCGTCCGTCTACTGCCTCGCTAGGTCGACGGAAAAACAATTAAGGCGCAAATTTGGGATACGGCAGGCCAGGA-----------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCGCAAATTTGGGATACGGC..........................2312.002000000000000000000000000000000020000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGGAAAAACAATTAAGGCG...........................................2411.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAATTAAGGCGCAAA.......................................1811.001000000000100000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATTTGGGATACGGC..........................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCCTCGCTAGGTCGACG............................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAAACAATTAAGGCGCAAA.......................................2211.001000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGGAAAAACAATTAAGGCGCAAA.......................................2711.001000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGGAAAAACAATTAAGGCGCAA........................................2711.001000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGCGCAAATTTGGGC................................1911.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCCGTCTACTGCCTCGCTAG...................................................................2411.001000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGACGGAAAAACAATTAA...............................................2111.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGATACGGCAGGCCA....................1811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCGCAAATTTGGGATACG............................2111.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGGGATACGGCAGGCCAG...................2211.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAATTAAGGCGCAAATTTGGGAT...............................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGGAAAAACAATTAAGGCGC..........................................2311.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCAAATTTGGGATACGGC..........................2111.001000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGGGATACGGCAGGCC.....................2011.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAATTAAGGCGCAAATTTGGG.................................2511.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAGGCGCAAATT.....................................1620.501000000000000000000000000000000000000000000000000000000100000000
droMoj3
TATTTTCTT-A----------------------------------------------------------------------------------------------------------------AAATATATGTA---ACCTTGTT------------------AAATCAATTTCATATGC--------------------------------------------------------------------------------AATGCAA-----------TTTAAACTCA----------------------------------------------------------------------------------------------------TATTTT----GTTTCTCTC-----------------------------------------------------------------------------------------TAAGGTGGATGGTAAAACAATTAAGGCGCAAATTTGGGATACAGCCGGTCAGGA-----------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAATTTGGGATACAGC..........................1911.001000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATTTGGGATACAGCCGGTCA....................2411.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTGGGATACAGCCGGTCAGG..................2411.001100000
........................................................................................................................................................................................................................................................................................TAAACTCA----------------------------------------------------------------------------------------------------TATTTT----GTTTCTCTC-----------------------------------------------------------------------------------------T......................................................................2411.001100000
................................................................................................................................................................................ATGC--------------------------------------------------------------------------------AATGCAA-----------TTTAAACTCA----------------------------------------------------------------------------------------------------T..................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGGATACAGCCGGTCAGG..................2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGATACAGCCGGTCAGG..................1920.501100000
droGri2
CCGCGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTCGATGGTAAAACAATTAAGGCGCAAATTTGGGATACGGCCGGACAAGA-----------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAGGCGCAAATTTGG..................................1911.00101
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGATACGGCCGGACA....................1811.00101
droWil2
TTTTTTTCC-TATGC-----TAAG-----ATTGTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTCATTCGCAAACATTAACCTTTTTAGCTTAAACGTTTTTCCATTTTGATGGCTATAGGTAAGGAAAGAGTTACCATAAGTTAGTTAGCCCCGGCCCTCT-------------------GGTTTTTATT-----------------------------------------------------------------------------------------------------------------------------TAAATTGACTGTTAGAAA-----------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............TGC-----TAAG-----ATTGTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTCATT...........................................................................................................................................................................................................................................................................................24200.6012020100
..................................................................................................................................................................................................................................................................................................................................TTTGATGGCTATAGGTAAGG.................................................................................................................................................................................................................................20200.15300003
..........TATGC-----TAAG-----ATTGTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTCATT...........................................................................................................................................................................................................................................................................................26200.15300030
....................TAAG-----ATTGTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTCATTCGCAAA.....................................................................................................................................................................................................................................................................................2780.13100010
.................................................................................................................................................................................................................................................................................................................................TTTTGATGGCTATAGGTAAGG.................................................................................................................................................................................................................................21200.10200020
.......................G-----ATTGTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTCATTCGC........................................................................................................................................................................................................................................................................................21110.09100010
.....................................................................................................................................................................................................................................................................................................TAACCTTTTTAGCTTAAACGTTTT..........................................................................................................................................................................................................................................................24140.07101000
.......CC-TATGC-----TAAG-----ATTGTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTCA.............................................................................................................................................................................................................................................................................................26180.06101000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTTATT-----------------------------------------------------------------------------------------------------------------------------TAAATTGACTGT.......................18200.05100010
..........TATGC-----TAAG-----ATTGTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTCAT............................................................................................................................................................................................................................................................................................25200.05100010
............TGC-----TAAG-----ATTGTAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTTCAT............................................................................................................................................................................................................................................................................................23200.05100010
dp5
CCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCGATGGTAAGACTATCAAAGCGCAAATCTGGGATACGGCTGGCCAGGA-----------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCT.........................1912.0020200000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCGCAAATCTGGGATACGGCT.........................2412.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAATCTGGGATACGGCT.........................2112.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCTGGCCAGGA-----------------2712.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAATCTGGGATACGGCTGGC......................2411.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCAAATCTGGGATACGGCTGGC......................2511.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATCTGGGATACGGCTGGCCAGGA-----------------2611.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCAAATCTGGGATACG............................1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTATCAAAGCGCAAATCTGGGA................................2411.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAATCTGGGATACGGCTGG.......................2311.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAAGCGCAAATCTGGGATACG............................2611.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGCGCAAATCTGGG.................................1911.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTGGGATACGGCTGGCCAGG..................2311.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAATCTGGGATACGGCTGGCC.....................2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCAAATCTGGGATAC.............................1811.0010000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCTGGCCA....................2411.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATCTGGGATACGGCTGGCCAGG..................2511.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCTGGCCAG...................2511.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGGGATACGGCTGGCC.....................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCTGGC......................2211.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGGATACGGCTGGCCA....................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAATCTGGGATACGGCTG........................2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGGGATACGGCTGGCCA....................2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGGGATACGGCTGGCCAGGA-----------------2511.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAAGACTATCAAAGCGC..........................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCTGGCCAGG..................2611.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAAGCGCAAATCTGG..................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGC..........................1820.5010100000000
droPer2
CCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCGATGGTAAGACTATCAAAGCGCAAATCTGGGATACGGCTGGCCAGGA-----------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATCTGGGATACGGCTGGCCAGGA-----------------2611.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAAGCGCAAATCTGGG.................................2111.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAAGCGCAAATCTGGGATACGGCT.........................2911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTGGGATACGGCTGGCC.....................2011.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCT.........................1911.001000001
droAna3
TGGCACAAC-CTTGC-----TATTTTA------------------------------------------------------------------------------------------------AAAGATGCTTG---GGGCTGTTTCCAACATTTTTATTAAAAAATT----------------------GATTCGATGGTGAAACTCTCATAAG---------------------------------------GATCGGCCAAGTATATTC--------------------------------------------------------------------------------------------GATAT--------------AAGCTGCTATTAGCTGCTATTATTATATA-CATAATATAAGCA---------------------------------------------------------------------------------------------------------------AGAGTATACTGAA-----------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AACTTTCTC-ATTCA--------------------------------------------------------------------------------------------------------------------TCT--------------------------------------------GCTTTCTCCTCCCAACCAC-------------A----------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGTCGATGGTAAAACAATTAAAGCGCAAATCTGGGATACGGCCGGACAGGA-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
TATTTCAGAAT-TTT---------------------GGTTTTAGTTTTATGAAAATCGGACGACTATATCTTATAACTGCCATAAGAACAATCGGAAAGTTAATAGAAAAAAATCAAAACTTCTTTGTTTTCCAACG------------------------------TATTTTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACTCTGAGATATAAGCCTATTTTATTATT-----------------TTAGA------ATTTTGGTAAACATTTTATGAA------AATCGGAT------AACTATATCATAGCTCT-------------------------------------------ATAGAAACGATCGGTCAATGTAGAGATAATGTAAAGCSizeHit CountTotal NormTotal
No Reads
droFic1
ATAGAAAAGTC-GT----------------------------------------------------------------------------------------------------CGTAGCTTCGATGTTGTTTAGCC------------------------------------------------------------------------TTTGTG-TATTCTGTTCGAAATATTTGA----------------TGACTGCAAGGGTA---------------------------------------------------------------------------------------------TATAAGCTTCGGCTTGCTGAAGCTAGCTTCCTTTCTTGTT--------------------------------------------------------------------------AT---------------------------------------------------------------------AGTAT-----------------SizeHit CountTotal NormTotal
No Reads
droEle1
AATGGGTACTC-ATATAATT----CTAAATT---TAGATTTTTAA-----------------------------------------------------------------------------------TTTTT----------------------------------------------------------------------------------------GC------------AA----------------TAGCTTCAAGGGTA---------------------------------------------------------------------------------------------TATAAACTTCGGCTTGCCCAAGTTTGCTTTTCTTCTTGTTTTTTATTT--GGCTTCGCTATT------ATGCTTGTGAGTATTTTG---------------------------------------------------------------------------------------------------TATAA-----------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATTCTGCATTT-TTT---------------T-------------------------------------------------------------------------------------------CATTGG---TTG---AA------------------------------------------------------------------TTTTTATTTG-GATTCTTGAAAAAAATGTGAGTTTTTGCTGATACA----------------ATTTTCGGCTTGATATGCTTATCTCATGAAA--------------------------------------------------------------------------T-------------------------------------AC------------------------CAAGGCCACAACAA------ATGCAAAA------TATTTC---------------------------------------------------------------------ATCAA-----------------SizeHit CountTotal NormTotal
No Reads
droBia1
CATAATAAAAT-AATATG----------------------------------------------------------------------------------------GAACAAATGAAAGCTTCTTTGATTCTTGACT-----------------------------------------A-------------------------------TACTA-TACTATAT-----------------ACTATATACA----------------TATATATACTATATATACATATATACTATAC--------------------------------------------------------------------------TATTACGAATATAATTAT----------------------------------------------TT--GTATTTTGAA------AATTAGACTTAAA-----TT---------------------------------------------------------------------TATAT-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
TAAAAAGT--------------------------AGGCTTTTTGA-----------------------------------------------------------------------------------TTTTTGACA-----------------------------------------A-------------------------------TGTAAAAACAACAT-----------------TTTAGGTAGGCATACCTGCAAGGGTA---------------------------------------------------------------------------------------------TATAAACTTCGGCTGGCCGAAGTTAACTTCCTTTCTTTTTTTTCAATATTTT------------------------CAATATTTTATCAA------AATCGAAC------TATTAT---------------------------------------------------------------------CTCAT-----------------SizeHit CountTotal NormTotal
No Reads
droEug1
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCGATGGCAAAACAATTAAAGCGCAAATCTGGGATACGGCTGGCCAGGA-----------------SizeHit CountTotal NormTotal
No Reads
dm3
AATAATAAA-TTAAA-----TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTCAATTATAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACCAA------CAGAACAAAGTGGTGGT------------------CGTCGATGGAACGCGCGTCAAGCTGCAAATCTGGGACACAGCTGGTCAGGA-----------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGT------------------CGTCGATGGAACGCGC....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTATAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACCAA------CAGAACAAAGTGGTGGT------------------CGTCGATGGAACGCGCGTCAAGCTGCAAATCTGGGACACAGCTGGTCAGGA-----------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TTATAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACCAA------CAGAACAAAGTGGTGGT------------------CGTCGATGGAACGCGCGTCAAGCTGCAAATCTGGGACACAGCTGGTCAGGA-----------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCGATGGCAAAACAATTAAAGCGCAAATCTGGGATACGGCCGGCCAGGA-----------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCCGG.......................21211.0022000000000022
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGGATACGGCCGGCCA....................2022.50500000000005
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCCGGCCAGG..................2622.00400000000004
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTAAAGCGCAAATCTGGGA................................2420.50100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCCGGC......................2220.50100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATGGCAAAACAATTAAAGCG...........................................2420.50100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAAGCGCAAATCTGGG.................................2020.50100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAATCTGGGATACGGCC.........................2020.50100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAGCGCAAATCTGG..................................1820.50101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAGCGCAAATCTGGGATACGGC..........................2620.50100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCGCAAATCTGGGATACGGCCGGCC.....................2820.50100000000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATACGGCCGGCCAGGA-----------------1920.50101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGGATACGGCCGGCC.....................1920.50100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAGCGCAAATCTGGG.................................1920.50100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAAGCGCAAATCTGGGATACGGC..........................2720.50100000010000
droEre2
TGTTTCGTC-CTCCT-----TGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACCCA-------------T----------------------------------------------------------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGGTCGATGGCAAAACAATTAAAGCGCAAATCTGGGATACGGCCGGCCAGGA-----------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAGCGCAAATCTGGGA................................2011.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATGGCAAAACAATTAAAGC............................................2311.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCCGGC......................2211.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGCGCAAATCTGGGATACGGC..........................2411.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAATCTGGGATACGGCCGGCC.....................2511.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTGGGATACGGCCGGCCAG...................2211.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTGGGATACGGCCGGCC.....................2011.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAAGCGCAAATCTGGG.................................2011.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAATCTGGGATACGGCC.........................2111.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAAGCGCAAATCTGGGATACGGC..........................2711.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCC.........................1911.0011000000
...TTCGTC-CTCCT-----TGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACCCA-------------T----------------------------------------------------------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G......................................................................2411.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATCTGGGATACGGCCG........................2011.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTGGGATACGGCCGGCCAGGA-----------------2411.0011000000

Generated: 05/16/2015 at 08:54 PM