ID:

dvi_15155

 Coordinate:

scaffold_13047:1685367-1685540 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.3 -21.2 -20.8

Flybase annnotation

CDS [Dvir\GJ23717-cds]; CDS [Dvir\GJ23717-cds]; exon [dvir_GLEANR_9049:3]; exon [dvir_GLEANR_9049:4]; intron [Dvir\GJ23717-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAAGCAAAACACTAACAACATCTGTTAATATCTTGAACATGTCGAACGTGGTAAGTAGAGCAGTGTGTCTCTGGCTGCATTTGACTCAATTTTAACTTGTGCAAGTGCCAAGTGCAACATGAAATTAAATTGGTTGCCCAAATGCACACAAGCAATGTACACCAGACCAAAGGGTCTACGTAGTTAACAGAACGCCTTGCAATTAACATGAACTTGAAATTCAGGCAAGCGACAGCGAAGATTCAATTGCCGCTCCTGAGGAGGCAGCTCATGC
*****************************************************************************************..........((((((.((.....(((((..............))))).....(((......)))...(((...(((((....)))))..)))(((.....)))))))))))************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M027
male body		 V116
male body		 M028
head
 SRR060679
140x9_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060678
9x140_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 V053
head
 SRR060683
160_testes_total
 SRR060665
9_females_carcasses_total
 SRR060673
9_ovaries_total
 SRR060667
160_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060689
160x9_testes_total
 SRR1106729
mixed whole adult body
 SRR060687
9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060670
9_testes_total
 SRR1106728
larvae
....................................................................................................................................................................................TAGTTAACAGAACGCCTTGCA......................................................................... 21 0 1 3.00 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................ATATCTTGAACATGTCGAACG.................................................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TACGTAGTTAACAGAACGCCT............................................................................. 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TTTTAACTTGTGCAAGTGCCA.................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................TGTCTCTGGCTGCATTTGACT............................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................CAGCGAAGATTCAATTGCCG...................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................TGGTAAGTAAAGAACTGTGTCT............................................................................................................................................................................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TCAGGCAAGCGACAGCGAAGAT................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................CGCTCCTGAGGAGGCGGCTCA... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................AGATTCAATTGCCGCTCCTG................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTGAAATTCAGGCAAGCGACA........................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TTAACTTGTGCAAGTGCCAAG.................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................CTTGTGCAAGTGCCAAGTGCAT............................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GTAGTTAACGGAACGCCTTGC.......................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................CAGTGTGTCTCTGGCTGCCTT................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................TCAATTGCCGCTCCTGAGGA............ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AACTTGAAGTTCAGGCAGGCG........................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TGTCTCTGGCTGCATTTGACTC........................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAATTCAGGCAAGCGACAGCG..................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................CAGAACGCCTTGCAATTAACA.................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AGTGCCAAGTGCGACATGAAA...................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................ATTCAGTTGCCGCTCCTGA............... 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................CTCAATTTTAACTTGTGCAAG......................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ACGTAGTTAACAGAACGCCTT............................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TAGAGCGGTGTGTCTCTGGCT...................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TTGTGCAAGTGCCAAGTGCAA............................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CACCAGACCAAAGGGTCTGCG.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGAAATTCAGGCAGGCGACAG....................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGCAAGCGACAGCGAAGATTCAATT.......................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................AATATCTTGAACATGTCGAACGTGGC.............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ATCTGTTAATATCTTGAACA........................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TACGTAGTTAACAGAGCGCCG............................................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACGTGGTAGGTGGAGCAGTGT................................................................................................................................................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGGCGGGCGACAGCGAAGATT............................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................CAATTGCCGCTCCTGAGGAGG.......... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................CAGCGAAGATTCAATTGCCGC..................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TCTGGCTGCATTTGACTCAAA........................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACACAAGCAATGTACACCAGAC........................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GTGTGTCTCTGGCTGCATTTG............................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AACAGAACGCCTTGCAATTAA.................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................ATGTACACCAGACCAAGGGGT................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AAGTAGAGCAGTGTGTCTC........................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TCAGGCAAGTGATATCGAAGAT................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................TAGTTGGCGGAACGCCTTGCA......................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGTGGTAAGTGGAGCGGTGTG............................................................................................................................................................................................................... 21 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AACTTAAATTGGTTGCCCAGA.................................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................TGGTAAGTATAAGAGTGTGTCT............................................................................................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTGAAATTCGGGCGGGCGACA........................................ 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................TGGTATGTAAAGAAGTGTGTCT............................................................................................................................................................................................................ 22 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AACATGAACTTGGAATTC.................................................... 18 1 12 0.33 4 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................AACATGAACTTGGAATTCAC.................................................. 20 2 13 0.15 2 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................CATGTCGATTCTGGTAAGT.......................................................................................................................................................................................................................... 19 3 20 0.15 3 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........ACACTAACTACGTCCGTTA....................................................................................................................................................................................................................................................... 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................AAGCCATCTACACCAGAGC.......................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTCACATGAACTTGAAATT..................................................... 19 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AACATGAACTTGGAATT..................................................... 17 1 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................................................CACATGAACTTGAAATTC.................................................... 18 1 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACGTTTGCAAGTGCCAA................................................................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AACATGAACTTGAAATTCCC.................................................. 20 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................CATGTCGAACCAGGTATG........................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTTCGTTTTGTGATTGTTGTAGACAATTATAGAACTTGTACAGCTTGCACCATTCATCTCGTCACACAGAGACCGACGTAAACTGAGTTAAAATTGAACACGTTCACGGTTCACGTTGTACTTTAATTTAACCAACGGGTTTACGTGTGTTCGTTACATGTGGTCTGGTTTCCCAGATGCATCAATTGTCTTGCGGAACGTTAATTGTACTTGAACTTTAAGTCCGTTCGCTGTCGCTTCTAAGTTAACGGCGAGGACTCCTCCGTCGAGTACG
*************************************************************************..........((((((.((.....(((((..............))))).....(((......)))...(((...(((((....)))))..)))(((.....)))))))))))***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 SRR060681
Argx9_testes_total
 M027
male body		 SRR060672
9x160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060666
160_males_carcasses_total
 V053
head
 SRR060660
Argentina_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060678
9x140_testes_total
 SRR060689
160x9_testes_total
 SRR060656
9x160_ovaries_total
 SRR060657
140_testes_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060673
9_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060677
Argx9_ovaries_total
..................................................................................................................................................................................GCATCAATTGTCTTGCGGAAC........................................................................... 21 0 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GGGTTTACGTGTGTTCGTTAC..................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0
.................................................................................................................................................................................TGCATCAATTGTCTTGCGGGA............................................................................ 21 1 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................GTGTGTTCGTTACATGTGGTC............................................................................................................. 21 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................ACAGAGACCGACGTAAACTGA............................................................................................................................................................................................ 21 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GTCTGGTTTCCCAGATGCATC........................................................................................... 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GTCCGTTCGCTGTCGCTTCTA................................ 21 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................CATCAATTGTCTTGCGGAACG.......................................................................... 21 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GTCTTGCGGAACGTTAATTGT.................................................................. 21 0 1 2.00 2 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................GTACAGCTTGCACCATTCATC........................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................CGCTTCTAAGTTAACGGCGA.................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ACGGTTCACGTTGTACTTTAG.................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GTCTTGCGGAACGTTAATTG................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CCCAGGTGCGTCAATTGTCTT.................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TGCGTCAATTGTCTTGCGGAA............................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GTTCACGGTTCACGTTGTACT........................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGGAACGTTAATTGTACTTGA............................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TGTGGTCTGGTTTCCCAGATGC.............................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................TCGCTGTCGCTTCTAAGTTAA.......................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCACGGTTCACGTTGTACTTT...................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TTTGTGATTGTTGTAGACAAT....................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................CACACAGAGACCGACGTAAAC............................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TGCGTCAGTTGTCTTGCGGAA............................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...CGTTTTGTGATTGTTGTAGAC.......................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................GTTCGTTACATGTGGTCTGGT......................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGTGTTCGTTACATGTGGTC............................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CGGGTTTACGTGTGTTCGT........................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGTCTTGCGGAACGTTAATTG................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................CCGTTACATGTGGTCTGGTTTC...................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................................................AGGACTCCTCCGTCGAGTACG 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TTAGTTGTACTTGAACTTTAA..................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................CGTAAACTGAGTTAAAATTGA................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................CGAGGACTCCTCCGTCGAGT... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................TCTCGTTACATGTGGTCTGGT......................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CGTGTGCTCGTTACATGTGGT.............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTCGCTGTCGCTTCTAAGTTA........................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................TCCGTTCGCTGTCGCTTCTAA............................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................GTTACATGTGGTCTGGTTTC...................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................ACTTGTACAGCTTGCACCATT............................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................CGGCGAGGACTCCTCCGTCGA..... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CGTGTGTTCGTTACATGTGGT.............................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................GCTTCTGAGTTGACGGCGAG................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................GAGACCGACGTAAACTGAGTT......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................CGCTTCTAAGTTAACGGCGAG................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................AACCAACGGGTTTACGTGTGT............................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TGTGGTCTGGTTTCCCAGATG............................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GGAACGTTAATTGTACTTGAA........................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AGAGGCCGACGTAAACTGGGT.......................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................AACACGTTCACGGGTCACA............................................................................................................................................................... 19 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTGTGTTCGTTACAGGTG................................................................................................................ 18 2 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:1685317-1685590 + dvi_15155 CAAGCAAAACACTAACAACATCTGTTAATATCTTGAACATGTCGAACGTGGTAAGTAG--AG---------CA-G---TGTG-TCTCT--GGCTGCATTTGACTCAA-TTTTAA-CTT-------------GTG------CAAGTGCCA---AGTGCAAC--AT------------G--AAATTAAATTGGT-TGC-CC---------------------------------------AAA-----------------------------------------------------------------TGCACACAA------------------------------------------GCAATGTACACCAGACCAAAGGGTCTACG--TAGTTAACAGAAC---------GCCTTGC-A--ATTAACATGAACTTGAA---ATTCAGGCAAGCGACAGCGAAGATTCAATTGCCGCTCC---TGAGGAGGCAGCTC---ATG----------C------
droMoj3 scaffold_6540:5703431-5703691 + CAAGCAAATCACTAACAACACCTGTTAATCTCTTGAACATGTCGAATGTGGTAAGTAG--CG---------AA-GTG-TGTC-TGTGG--G-CTGCACTTGACTCGT-TTTTAA-GTT-------------GTGCC------TGT------------TGC------AACA--A---G--AATTTAAACTGGT-TGC-AC---------------------------------------TTG--------------------------------A-----------------------------------------------------------------------------------GCACGGCACACCAGACCAAAGTGTCAGCG--TACTAAATCAAAC---------GCTTTGC-C--ATTAACTTGAATTCGAA---ATTCAGGCAAGCGACAGTGAAGATTCAAATGCTGCCCC---GGTGGAGGCCACAC---TAG----------C------
droGri2 scaffold_15074:6077375-6077661 - CAAGCAAAACACTAACAACACCTGTTAATCAATTGAACATGTCGAACGTGGTAAGTAG--AG---------AA-G---TGCG-TCTCT--GGCTGCATTTGACTTGAATTTTGA-CTT-------------GT----G--CAAGTGCCGA---GTGCAATTGCA--ACA---T---GA-A-ACTCAATTGGT-TGC-CC---------------------------------------AAA-----------------------------------------------------------------TGCACACAAA-----------------------------------------ACAATGCACAGCAGACCAAATAGTCAGCG--TACTAAACAGAAT---------GCCCTGC-CATTTACATATGAACTTGACCACACTCAGGCAAGCGACAGCGAAGATTCAATTGCCGCCAA---TGAGGAGGCAACGC---ATG----------C------
droWil2 scf2_1100000004943:3273687-3273986 + CTAGCAAAACACTAACAACACCTGTTAATCTCATGAACCTGACAAATGTGGTAAGTAATAAA---------CAAA---GGCC-AAAATACTGTAAA--CAAAATAGA-----AA-AAC-------------GAAGACA--AACATAAACAA-AACAAAAA--AA-----T---G-------CATCT------------------------------TGTGCATTGAAATTGGTTGTTTGCTGCACACGT--ACAAA-----------------------AAA----------------------------------------AAAATA-TATATATGACAGACAAAAGA--T-------------------------------ACT--ATCTAAATCGCAACTGGCAAGGTCGTTAG-C--ATTAACATGAACTTGAA---ATTCAGGCCAGCGACAGCGAAGATTCCCATGAGGAGCTCTCAGGGAATG---C-------------------------
dp5 2:22533823-22534150 + CTAGCAAATCACTAACAACACCTGTTAATCCATTGAACATCGCGAATGTGGTAAGTAAAAGG---------CAAA---GGCATGGCCA--GGTTATTATCGACTCTC-----AT-TACCACCCACTACCACCGACCAACAAAAGTGTTAAA-AGTGCAAC--AC--ATAC-ATGCGCTAC-ACCCAATTGGT-TGC-AC---------------------------------------ACA---A------ACGATACTGAA-----AACCGATACTG-AAA----------------------------------------AAACTG-ACTAAAAGACAGACAATT---TGCAA-A-------------------------GGCATGGAATGCTGGGAAC---------ACATGAA-A--TTTAACATGAACTTGAA--CATTCAGGCCAGCGACAGCGAAGATTCCAATACTGGGGA---GGAGGAGGCGGCGC---A------------C------
droPer2 scaffold_3:5312713-5313052 + CTAGCAAATCACTAACAACACCTGTTAATCCATTGAACATCGCGAATGTGGTAAGTAAAAGG---------CAAA---GGCATGGCCA--GGTTATTATCGACTCTC-----AT-TACCACCCACTACCACCGACCAACAAAAGTGTTAAA-AGTGCAAC--AC--ATAC-ATGCGCTAC-ACCCAATTGGT-TGC-AC---------------------------------------ACA---A------ACGATACTGAA-----AACCGATACTG-AAA----------------------------------------AAACTG-ACTAAAAGACAGACAATT---TGCAA-A-------------------------GGCATGGAATGCTGGGAAC---------ACATGAA-A--TTTAACATGAACTTGAA--CATTCAGGCCAGCGACAGCGAAGATTCCAATACTGGGGA---GGAGGAGGCGGCGC---ACGCAAAAGCATCA------
droAna3 scaffold_13340:15436926-15437211 - CAAGCAAAACACTAACTACACCTGTTAATCTTTTGAACATCGCAAATGTGGTAAGTAA--GG---------TCTG---A--T-AACGA--GGCTAATTCTGACTCTC-----AA-TAC-------------GGACGGA--AAAGTGCCGAAAAGTGGGGC--AT--TCAT------TT-TACACTAATTGGC-CGC-ATAAAACTCCGAACCGAAC-----------------------T-------------G-----AAACCT-A------GACTC-AC--------------------------A--------AATTCAT-ACCC-AAAACC----------------------------------------------------------------AC---------TGCCTCC-A--TTAAACGTGCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCGTCGGAATGCC---AGGGGACA---CACTTGGAA----------ACTCGAG
droBip1 scf7180000396708:4594659-4594948 + CAAGCAAAACACTAACTACACCTGTTAATCTTTTGAACATCGCAAATGTGGTAAGTAA--GG---------TCTG-----CT-AACGA--GGCTAATTCTGACTCTC-----AA-TAC-------------GGACGGA--AAAGTGCCGAA-AGTCGGGC--AT--TCAT------AA-TACTCCCATTGGC-TGCCAT---------------------------------------AA----AACT---------CTGAAC-C-G------AACTG-AAAC-------TTT-----------------------------------------------GACAATAAA--A-AAAA-------------------------TGCA--TTTCCAAAACCAC---------TGCCTCC-A--TTAAACGTGCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGACTCCGTCGGCCTGCC---TGAGGACA---CACTTGGAA----------ACTCGAG
droKik1 scf7180000302255:258973-259320 + CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCTCGAACTTGGTAAGTAT--GGGTATGGTGGTCAG---GGCT-TGCAG--GGTTAA--CTGACTCTC-----AA-AAC-------------GGACCGA-AAAAGTGCCTTA-AACTAGGC--GCACACAT------AT-CACATCAATTGGT-CGC-TC---------------------------------------ACTCCTCACCCGAACGGGACTGAAC-T-A------AACAG-AATT-------TTAATGAGCAAACAT--A--------AACCCAA-ACTG-AAACCGAGACAGACAAAAAATAGTAG-C-------------------------GGAA--GGTTGTTGTGAAG---------ACTTTCG-A--TTAAACATGCCCTTGAA---ATTCAGGCCAGCGACAGCGAAGATTCTATTGGCCTGCCTGCTGGTGTGGCGGCGC---AGG----------A------
droFic1 scf7180000453580:6552-6886 - CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCGCGAACGTGGTAAGTAA--GC---------TCAG---GGCT-TGAAG--GGCTTA--TTGACTCTT-----AA-AAC-------------GGACCGA--AAAGTGCCAAA-AGTGAGGC--AC--AAAG------CT-CACCCCAATTGGTTTGC-AC---------------------------------------ACT---AACCCCAACTGGACTGAAC-T-A------AACTG-AAACAGATTGTTTCG--CC-AAA----CGCAA-----AACACAA-ACTG-AAAACCAGACGGACACTAGT--GCAGAC-------------------------TGCC--GATAGAAGCGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCGTCGACTTGCC---TGGGGAGG---CGCATGGAG----------A------
droEle1 scf7180000490967:319067-319374 - CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCGCAAACGTGGTAAGTAA--GG---------TC-G---GGCA-TGCAG--GGCTAA--CTGACTATC-----AT-TAC-------------GGACCGA--AAAGTGCCGAA-AGTGTTGC--AC--ACAT------C------TCGATTGGT-TAA-AC---------------------------------------AAT---AACGCTAACAAGACCGAATCG-AAACAGAAACTG-AAACGG--------------A--------------------------TT-GAAATGAGACAGACAGTGGG--GCAGAC-------------------------TGCA--GATAGAAGTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCCAGCGACAGCGAAGATTCCATTGGCTTGCC---TGGGGAGG---CGCTAGGAG----------A------
droRho1 scf7180000780217:7525-7855 - CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCGCGAACGTGGTAAGTAA--GG---------TCGG---GGCT-TGCAG--GGTTAA--CAGACTCTT-----AA-TAC-------------GGACCGA--AAAGTGCCGAA-AGTGTTGC--AC--ACAT------CT-CACCCCAATTGGT-TAA-AC---------------------------------------AAT---AACCCAAACGGGACAGAAC-T-A------AACTG-AAAT-------TGTAGGCG-AAACAA--A--------AACCCAA-ACTT-GAAATGAGACAGACAGTAGT--GCAGAC-------------------------TGCA--GATAGAAGTGCAG---------ACTGTCT-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGGCTTGCC---TGGTGAGGAGACGCTTGGAG----------A------
droBia1 scf7180000299102:9490-9818 - CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCGCGAATGTGGTAAGTAA--GG---------TCAG---GGAG-TGTAG--GGTTAA--CTGACTCTC-----AA-AAC-------------GGACCGA--AAAGTGCCCAA-AGCAAGGA--GC--ACAT------CT-CACCCCAATTGGT-TGC-AC---------------------------------------ACA--AAACCCAGACGGGACTGAACCT-A------AACTG-AA-------GTTTCA--CC-ATC-AA-AG--------AACACAA-ACGA-ATGACAATACGGACTGTAGG--ACAGAC-------------------------TGCA--GATAGAAGTGCAG---------ACTGTCGAA--TTAAACATACCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGGCTTGCC---TGGGGAGG---TGCATGGAG----------A------
droTak1 scf7180000415409:717977-718303 - CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCGCGAACGTGGTAAGTAA--GG---------TCAG---GGCG-TGTAG--GGTTAA--CTGACTCTC-----AA-AAC-------------GGACCGA--AAAGTGCCCTA-AGTGCGGC--AC--AACT------CT-CACCCCAATTGGT-TGT-AC---------------------------------------ACG---A------ACGATACTTAAACTGA------AACAG-AAACTGA-TGTTTCG--CC-ATT-AA--G--------AACACTT-ACTA-AAAACGCAACGGACTGTAGA--GCAGAC-------------------------TGCA--GATAGAAGTGCAG---------ACTGTCG-A--TTAAACATACCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGGCTTGCC---TGTGGAGG---CGCGTGGAG----------A------
droEug1 scf7180000409557:474005-474339 + CAAGCAAAACACTAACACCACCTGTTAATCTATTGAACATCGCGAATGTGGTAAGTAA--GG---------TCAG---GGCG-TGCAG--GGTTAA--CTGACACTC-----AAAAAC-------------AGACTGA--ATAGTGC-GAA-AGTGTTTTTAAA--ACAT------CT-CACCCCAATTGGT-TGC-TT---------------------------------------ACA--AAATCCAAACGGGACTAAAC-T-A------AACCG-AAACTAA-GGTTTCG--TT-ATT-AG-TA--------AACCCAA-ACTA-AGAACCATACGGACAGTAGA--ACAGAC-------------------------TGCA--GATAGAAGTGCAG---------ACTGTCT-A--TTAAACATTCCCTTGAA---ATTTAGGCTAGCGACAGCGAAGATTCCATTGACCTGCC---TGGAGAGG---GCCGAGTGG----------A------
dm3 chr3R:7776684-7777021 + CAAGCAAAACACTAACCACACCTGGTAATCTTTTGAACATCGCGAACGTGGTAAGTAA--GG---------TCG-ATGGGC--GGCAG--GGTTAA--CTGACTCTC-----AA-TAC-------------GGACAGA--AAAGTGCCGAA-AGCGTAGC--AC--ACACCAT---CT-CACACAAATTGGT-TGC-AC---------------------------------------AA----AATTTAGACGGGACTGAAC-C-A------AACTG-AAAACGA-TGTTTCG--TC-GTT-GAAAG--------CACACAAAACTTAAAAACAATCCGGACAGTAGA--GCAGAC-------------------------TGCA--GGCTTGAGTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGACGTGCC---TGTGGAGG---CGCGTGGAG----------A------
droSim2 3r:13328198-13328536 - dsi_590 CAAGCAAAACACTAACCACACCTGGTAATCTTTTGAACATCGCGAACGTGGTAAGTAA--GG---------TCG-ATGGGC--GGCAG--GGTTAA--CTGACTCTC-----AA-TAC-------------AGACCGA--AAAGTGCCGAA-AGTGTAGC--AC--ACACCAT---TT-CACTCCAATTGGT-TGC-AC---------------------------------------AAA---AATCCAGACGGGACTGAACCT-G------AACTT-GAAACAA-TGTTTCG--TC-ATT-GAAAC--------CACACAACACTT-AAAACAATCCGGACAGTAGA--GCAGAC-------------------------TGCA--GGCTTAATTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGACTTGCC---TGGGGAGG---CGCGTGAAG----------A------
droSec2 scaffold_0:14192606-14192941 - CAAGCAAAACACTAACCACACCTGGTAATCTTTTGAACATCGCGAACGTGGTAAGTAA--GG---------TCG-ATGGGC--GGCAG--GGTTTA--CTGACTCTC-----AA-TAC-------------AGACCGA--AAAGTGCGGAA-AGTGTAGC--AC--ACACCAT---TT-CACTCCAATTGCT-TAC-AC---------------------------------------AAA---AATCCAGACGGGACTGAACCT-G------TACTT-AAAACAA-TGTATCG--TC-ATT-GAAAG--------CACACAACACTT-AAAACAATCCGGACAGTAGA--GCAGAC-------------------------TGCA--GGCTTAATTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGACTTGCC---TGGGGAGG---CGCGT---G----------A------
droYak3 3R:16642472-16642801 - CAAGCCAAACACTAACCACACCTGGTAATCTATTGAACATCGCGAACGTGGTAAGTAA--GG---------TCG-AG-GGCC-AGCAGCGTGTTAA--CTGACTCTC-----AG-GAC-------------GTACCGA--AAAGTGCCGAA-TGTGTGGC--AC--ACAT------CT-CACTCCAATTGGT-TGC-AC---------------------------------------ACG--AAACCACGACGAGACTGAAT-T-A------AACTG-CAAACGA-TGTTTTG--TC-ATT-GAAAG--------CACACAAACCTT-ACAACAATTCGGACAGTAGG--GCAGAC-------------------------TGCA--GGCTTAAGTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATGCAGGCTAGCGACAGCGAAGATTCCATTGACGTGCC---TGGGGAGG---CG------------------------
droEre2 scaffold_4770:13843159-13843487 - CAAGCAAAACACTAACCACACCTGGTAATCTTTTGAACATCGCGAACGTGGTAAGTAA--GG---------TCG-AGGGG-C-GGCAG--GGTTAA--CTGACTCTC-----AA-TAC-------------GGACCGA--AAAGTGCCGAA-AGTGTAGC--AC--ACAT-AT---CA-CACTCCAATTGGT-TGC-AC---------------------------------------ACA---AACCCCGACGGGACTGAAC-T-A------AACTGCAAAACGA-TGTTCCG--TC-ATT-GGATG--------CACACAA-ACCT-AAAACCATTCGGACAGTAGG--GCAGAC-------------------------TGCA--GGCTTAAGTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGACGTGCC---TGGGGAGG---CG------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CAAGCAAAACACTAACAACATCTGTTAATATCTTGAACATGTCGAACGTGGTAAGTAG--AG---------CA-G---TGTG-TCTCT--GGCTGCATTTGACTCAA-TTTTAA-CTT-------------GTG------CAAGTGCCA---AGTGCAAC--AT------------G--AAATTAAATTGGT-TGC-CC---------------------------------------AAA-----------------------------------------------------------------TGCACACAA------------------------------------------GCAATGTACACCAGACCAAAGGGTCTACG--TAGTTAACAGAAC---------GCCTTGC-A--ATTAACATGAACTTGAA---ATTCAGGCAAGCGACAGCGAAGATTCAATTGCCGCTCC---TGAGGAGGCAGCTC---ATG----------C------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................TAGTTAACAGAAC---------GCCTTGC-A--..................................................................................................2113.003200000000000000000000000000000000000000000000000000000000100000
...........................ATATCTTGAACATGTCGAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000010000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TACG--TAGTTAACAGAAC---------GCCT.........................................................................................................2112.002020000000000000000000000000000000000000000000000000000000000000
............................................................................................................TTTTAA-CTT-------------GTG------CAAGTGCCA---...............................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000010100000000000000000000000000000000000000000
................................................................................TG-TCTCT--GGCTGCATTTGACT...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGAAGATTCAATTGCCG............................................2011.001000000000100000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCAAGCGACAGCGAAGAT......................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTCAATTGCCGCTCC---TG...................................2011.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAA---ATTCAGGCAAGCGACA..............................................................2111.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................TTAA-CTT-------------GTG------CAAGTGCCA---AG.............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................CTT-------------GTG------CAAGTGCCA---AGTGCAT........................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000010000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATTGCCGCTCC---TGAGGA...............................2011.001000000000000000000000000000000000000100000000000000000000000000
................................................................................TG-TCTCT--GGCTGCATTTGACTC..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---ATTCAGGCAAGCGACAGCG...........................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAGAAC---------GCCTTGC-A--ATTAACA...........................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
......................................................................................................CTCAA-TTTTAA-CTT-------------GTG------CAAG.......................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................ACG--TAGTTAACAGAAC---------GCCTT........................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TT-------------GTG------CAAGTGCCA---AGTGCAA........................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGCGACAGCGAAGATTCAATT................................................2511.001000000000000000000000000000000000000100000000000000000000000000
..........................AATATCTTGAACATGTCGAACGTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
...................ATCTGTTAATATCTTGAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTGCCGCTCC---TGAGGAGG.............................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGAAGATTCAATTGCCGC...........................................2111.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................TCT--GGCTGCATTTGACTCAA-A..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ACACAA------------------------------------------GCAATGTACACCAGAC..................................................................................................................................................2211.001000000000000000000000000000000000100000000000000000000000000000
..........................................................................G---TGTG-TCTCT--GGCTGCATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AACAGAAC---------GCCTTGC-A--ATTAA.............................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
....................................................AAGTAG--AG---------CA-G---TGTG-TCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGAACTTGAA---ATTCCC........................................................................20150.071001000000000000000000000000000000000000000000000000000000000000
droMoj3
CAAGCAAATCACTAACAACACCTGTTAATCTCTTGAACATGTCGAATGTGGTAAGTAG--CG---------AA-GTG-TGTC-TGTGG--G-CTGCACTTGACTCGT-TTTTAA-GTT-------------GTGCC------TGT------------TGC------AACA--A---G--AATTTAAACTGGT-TGC-AC---------------------------------------TTG--------------------------------A-----------------------------------------------------------------------------------GCACGGCACACCAGACCAAAGTGTCAGCG--TACTAAATCAAAC---------GCTTTGC-C--ATTAACTTGAATTCGAA---ATTCAGGCAAGCGACAGTGAAGATTCAAATGCTGCCCC---GGTGGAGGCCACAC---TAG----------C------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..AGCAAATCACTAACAACACCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..................................................GTAAGTAG--CG---------AA-GTG-TGTC-TGTGG--.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.............................................................G---------AA-GTG-TGTC-TGTGG--G-CTGCACTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...............................................................................................................................................................................................................................................TG--------------------------------A-----------------------------------------------------------------------------------GCACGGCACACCAGACC.................................................................................................................................................2011.001001000
droGri2
CAAGCAAAACACTAACAACACCTGTTAATCAATTGAACATGTCGAACGTGGTAAGTAG--AG---------AA-G---TGCG-TCTCT--GGCTGCATTTGACTTGAATTTTGA-CTT-------------GT----G--CAAGTGCCGA---GTGCAATTGCA--ACA---T---GA-A-ACTCAATTGGT-TGC-CC---------------------------------------AAA-----------------------------------------------------------------TGCACACAAA-----------------------------------------ACAATGCACAGCAGACCAAATAGTCAGCG--TACTAAACAGAAT---------GCCCTGC-CATTTACATATGAACTTGACCACACTCAGGCAAGCGACAGCGAAGATTCAATTGCCGCCAA---TGAGGAGGCAACGC---ATG----------C------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CTAGCAAAACACTAACAACACCTGTTAATCTCATGAACCTGACAAATGTGGTAAGTAATAAA---------CAAA---GGCC-AAAATACTGTAAA--CAAAATAGA-----AA-AAC-------------GAAGACA--AACATAAACAA-AACAAAAA--AA-----T---G-------CATCT------------------------------TGTGCATTGAAATTGGTTGTTTGCTGCACACGT--ACAAA-----------------------AAA----------------------------------------AAAATA-TATATATGACAGACAAAAGA--T-------------------------------ACT--ATCTAAATCGCAACTGGCAAGGTCGTTAG-C--ATTAACATGAACTTGAA---ATTCAGGCCAGCGACAGCGAAGATTCCCATGAGGAGCTCTCAGGGAATG---C-------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................ATTGAAATTGGTTGTTTGCTGCACAC................................................................................................................................................................................................................................................................................2611.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACAGCGAAGATTCCC..................................................1911.00100010
.....AAAACACTAACAACACCTGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCGAAGATTCCCATGAGGAGC.........................................2511.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCGAAGATTCCCATGA..............................................2011.00100010
.................ACACCTGTTAATCTCATGAACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
dp5
CTAGCAAATCACTAACAACACCTGTTAATCCATTGAACATCGCGAATGTGGTAAGTAAAAGG---------CAAA---GGCATGGCCA--GGTTATTATCGACTCTC-----AT-TACCACCCACTACCACCGACCAACAAAAGTGTTAAA-AGTGCAAC--AC--ATAC-ATGCGCTAC-ACCCAATTGGT-TGC-AC---------------------------------------ACA---A------ACGATACTGAA-----AACCGATACTG-AAA----------------------------------------AAACTG-ACTAAAAGACAGACAATT---TGCAA-A-------------------------GGCATGGAATGCTGGGAAC---------ACATGAA-A--TTTAACATGAACTTGAA--CATTCAGGCCAGCGACAGCGAAGATTCCAATACTGGGGA---GGAGGAGGCGGCGC---A------------C------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCCAGCGACAGCGAA.........................................................2011.0010000100000
droPer2
CTAGCAAATCACTAACAACACCTGTTAATCCATTGAACATCGCGAATGTGGTAAGTAAAAGG---------CAAA---GGCATGGCCA--GGTTATTATCGACTCTC-----AT-TACCACCCACTACCACCGACCAACAAAAGTGTTAAA-AGTGCAAC--AC--ATAC-ATGCGCTAC-ACCCAATTGGT-TGC-AC---------------------------------------ACA---A------ACGATACTGAA-----AACCGATACTG-AAA----------------------------------------AAACTG-ACTAAAAGACAGACAATT---TGCAA-A-------------------------GGCATGGAATGCTGGGAAC---------ACATGAA-A--TTTAACATGAACTTGAA--CATTCAGGCCAGCGACAGCGAAGATTCCAATACTGGGGA---GGAGGAGGCGGCGC---ACGCAAAAGCATCA------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CAAGCAAAACACTAACTACACCTGTTAATCTTTTGAACATCGCAAATGTGGTAAGTAA--GG---------TCTG---A--T-AACGA--GGCTAATTCTGACTCTC-----AA-TAC-------------GGACGGA--AAAGTGCCGAAAAGTGGGGC--AT--TCAT------TT-TACACTAATTGGC-CGC-ATAAAACTCCGAACCGAAC-----------------------T-------------G-----AAACCT-A------GACTC-AC--------------------------A--------AATTCAT-ACCC-AAAACC----------------------------------------------------------------AC---------TGCCTCC-A--TTAAACGTGCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCGTCGGAATGCC---AGGGGACA---CACTTGGAA----------ACTCGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTCCGTCGGAATGCC---AGGGT................................2411.001010000
droBip1
CAAGCAAAACACTAACTACACCTGTTAATCTTTTGAACATCGCAAATGTGGTAAGTAA--GG---------TCTG-----CT-AACGA--GGCTAATTCTGACTCTC-----AA-TAC-------------GGACGGA--AAAGTGCCGAA-AGTCGGGC--AT--TCAT------AA-TACTCCCATTGGC-TGCCAT---------------------------------------AA----AACT---------CTGAAC-C-G------AACTG-AAAC-------TTT-----------------------------------------------GACAATAAA--A-AAAA-------------------------TGCA--TTTCCAAAACCAC---------TGCCTCC-A--TTAAACGTGCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGACTCCGTCGGCCTGCC---TGAGGACA---CACTTGGAA----------ACTCGAGSizeHit CountTotal NormTotal
No Reads
droKik1
CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCTCGAACTTGGTAAGTAT--GGGTATGGTGGTCAG---GGCT-TGCAG--GGTTAA--CTGACTCTC-----AA-AAC-------------GGACCGA-AAAAGTGCCTTA-AACTAGGC--GCACACAT------AT-CACATCAATTGGT-CGC-TC---------------------------------------ACTCCTCACCCGAACGGGACTGAAC-T-A------AACAG-AATT-------TTAATGAGCAAACAT--A--------AACCCAA-ACTG-AAACCGAGACAGACAAAAAATAGTAG-C-------------------------GGAA--GGTTGTTGTGAAG---------ACTTTCG-A--TTAAACATGCCCTTGAA---ATTCAGGCCAGCGACAGCGAAGATTCTATTGGCCTGCCTGCTGGTGTGGCGGCGC---AGG----------A------SizeHit CountTotal NormTotal
No Reads
droFic1
CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCGCGAACGTGGTAAGTAA--GC---------TCAG---GGCT-TGAAG--GGCTTA--TTGACTCTT-----AA-AAC-------------GGACCGA--AAAGTGCCAAA-AGTGAGGC--AC--AAAG------CT-CACCCCAATTGGTTTGC-AC---------------------------------------ACT---AACCCCAACTGGACTGAAC-T-A------AACTG-AAACAGATTGTTTCG--CC-AAA----CGCAA-----AACACAA-ACTG-AAAACCAGACGGACACTAGT--GCAGAC-------------------------TGCC--GATAGAAGCGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCGTCGACTTGCC---TGGGGAGG---CGCATGGAG----------A------SizeHit CountTotal NormTotal
No Reads
droEle1
CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCGCAAACGTGGTAAGTAA--GG---------TC-G---GGCA-TGCAG--GGCTAA--CTGACTATC-----AT-TAC-------------GGACCGA--AAAGTGCCGAA-AGTGTTGC--AC--ACAT------C------TCGATTGGT-TAA-AC---------------------------------------AAT---AACGCTAACAAGACCGAATCG-AAACAGAAACTG-AAACGG--------------A--------------------------TT-GAAATGAGACAGACAGTGGG--GCAGAC-------------------------TGCA--GATAGAAGTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCCAGCGACAGCGAAGATTCCATTGGCTTGCC---TGGGGAGG---CGCTAGGAG----------A------SizeHit CountTotal NormTotal
No Reads
droRho1
CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCGCGAACGTGGTAAGTAA--GG---------TCGG---GGCT-TGCAG--GGTTAA--CAGACTCTT-----AA-TAC-------------GGACCGA--AAAGTGCCGAA-AGTGTTGC--AC--ACAT------CT-CACCCCAATTGGT-TAA-AC---------------------------------------AAT---AACCCAAACGGGACAGAAC-T-A------AACTG-AAAT-------TGTAGGCG-AAACAA--A--------AACCCAA-ACTT-GAAATGAGACAGACAGTAGT--GCAGAC-------------------------TGCA--GATAGAAGTGCAG---------ACTGTCT-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGGCTTGCC---TGGTGAGGAGACGCTTGGAG----------A------SizeHit CountTotal NormTotal
No Reads
droBia1
CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCGCGAATGTGGTAAGTAA--GG---------TCAG---GGAG-TGTAG--GGTTAA--CTGACTCTC-----AA-AAC-------------GGACCGA--AAAGTGCCCAA-AGCAAGGA--GC--ACAT------CT-CACCCCAATTGGT-TGC-AC---------------------------------------ACA--AAACCCAGACGGGACTGAACCT-A------AACTG-AA-------GTTTCA--CC-ATC-AA-AG--------AACACAA-ACGA-ATGACAATACGGACTGTAGG--ACAGAC-------------------------TGCA--GATAGAAGTGCAG---------ACTGTCGAA--TTAAACATACCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGGCTTGCC---TGGGGAGG---TGCATGGAG----------A------SizeHit CountTotal NormTotal
No Reads
droTak1
CAAGCAAAACACTAACAACACCTGTTAATCTATTGAACATCGCGAACGTGGTAAGTAA--GG---------TCAG---GGCG-TGTAG--GGTTAA--CTGACTCTC-----AA-AAC-------------GGACCGA--AAAGTGCCCTA-AGTGCGGC--AC--AACT------CT-CACCCCAATTGGT-TGT-AC---------------------------------------ACG---A------ACGATACTTAAACTGA------AACAG-AAACTGA-TGTTTCG--CC-ATT-AA--G--------AACACTT-ACTA-AAAACGCAACGGACTGTAGA--GCAGAC-------------------------TGCA--GATAGAAGTGCAG---------ACTGTCG-A--TTAAACATACCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGGCTTGCC---TGTGGAGG---CGCGTGGAG----------A------SizeHit CountTotal NormTotal
No Reads
droEug1
CAAGCAAAACACTAACACCACCTGTTAATCTATTGAACATCGCGAATGTGGTAAGTAA--GG---------TCAG---GGCG-TGCAG--GGTTAA--CTGACACTC-----AAAAAC-------------AGACTGA--ATAGTGC-GAA-AGTGTTTTTAAA--ACAT------CT-CACCCCAATTGGT-TGC-TT---------------------------------------ACA--AAATCCAAACGGGACTAAAC-T-A------AACCG-AAACTAA-GGTTTCG--TT-ATT-AG-TA--------AACCCAA-ACTA-AGAACCATACGGACAGTAGA--ACAGAC-------------------------TGCA--GATAGAAGTGCAG---------ACTGTCT-A--TTAAACATTCCCTTGAA---ATTTAGGCTAGCGACAGCGAAGATTCCATTGACCTGCC---TGGAGAGG---GCCGAGTGG----------A------SizeHit CountTotal NormTotal
No Reads
dm3
CAAGCAAAACACTAACCACACCTGGTAATCTTTTGAACATCGCGAACGTGGTAAGTAA--GG---------TCG-ATGGGC--GGCAG--GGTTAA--CTGACTCTC-----AA-TAC-------------GGACAGA--AAAGTGCCGAA-AGCGTAGC--AC--ACACCAT---CT-CACACAAATTGGT-TGC-AC---------------------------------------AA----AATTTAGACGGGACTGAAC-C-A------AACTG-AAAACGA-TGTTTCG--TC-GTT-GAAAG--------CACACAAAACTTAAAAACAATCCGGACAGTAGA--GCAGAC-------------------------TGCA--GGCTTGAGTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGACGTGCC---TGTGGAGG---CGCGTGGAG----------A------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................TAATCTTTTGAACATCGCGAACGTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGAGTGCAG---------GCTGTCG-A--TTA...............................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGTGCC---TGTGGAG..............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATTCAGGCTAGCGACAGCGA..........................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGTGCC---TGTGGAGG---CGT.......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................CTGAAC-C-A------AACTG-AAAACGA-T.......................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................A-TGTTTCG--TC-GTT-GAAAG--------CACA.......................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................GGTTAA--CTGACTCTC-----AA-TAC-------------G...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTGACGTGCC---TGTGGAG..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TTAGACGGGACTGAAC-C-A------AACTG-AAAAC...........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCC---TGTGGAGG---CGCGTGGAG----------.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGCC---TGTGGAGG---CGCGT.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AGA--GCAGAC-------------------------TGCA--GGCTTGAGTGCA.......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAA---ATTCAGGCTAGCGAC...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ACTG-AAAACGA-TGTTTCG--TC-GTT-GAAAG--------...........................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................TGGTAAGTAA--GG---------TCG-ATGGGC--AA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................AGA--AAAGTGCCGAA-AGCGTA.........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................GTGGTAAGTAA--GG---------TCG-ATGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................ACAGA--AAAGTGCCGAA-AGCGTA.........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACCACACCTGGTAATCTTTTGAACATCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTGAGTGCAG---------GCTGTCG-A--TTAAACA...........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................AGTAA--GG---------TCG-ATGGGC--GGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCCCTTGAA---ATTCA.........................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TAAGTAA--GG---------TCG-ATGGGC--GG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................A------AACTG-AAAACGA-TGTTTCG--TC-GTT-G.......................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCATTGACGTGCC---TGTGG................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGTGCC---TGTGGAGG---C.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................GTAAGTAA--GG---------TCG-ATGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................A------AACTG-AAAACGA-TGTTTCG--T..............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AGA--GCAGAC-------------------------TGCA--GGCTTG.............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................TTTGAACATCGCGAACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACACTAACCACACCTGGTAATCTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGCGAAGATTCCATTGACGT...........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................TTTGAACATCGCGAACGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCGACAGCGAAGATTCCATTGACG............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GA-TGTTTCG--TC-GTT-GAAAG--------...........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CTAACCACACCTGGTAATCTTTTGAACAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CATCGCGAACGTGGTAAGTAA--GG---------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CACCAT---CT-CACACAAATTGAA-......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GGTAAGTAA--GG---------TCG-ATGGGC--G...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCGACAGCGAAGATTCCATTGACGT...........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................ACACAAATTGGT-TGC-AC---------------------------------------A........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GGACAGTAGA--GCAGAC-------------------------TG.......................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GTGCAG---------GCTGTCG-A--TTAAACAT..........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................GCAG--GGTTAA--CTGACTCTC-----AA-TA..................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATTGACGTGCC---TGTGGAGG---..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AACAATCCGGACAGTAGA--GCAA....................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AGTAGA--GCAGAC-------------------------TGCA--GGCT...............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................CGCGAACGTGGTAAGTAA--GG---------................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
........................................................................................................................................................................................................................................................................................................................................AAAAACAATCCGGACAGTAG...........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGTGCC---TGTGGAG..............................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TGACTCTC-----AA-TAC-------------GGACAGA--AAAGTGC....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AAACAATCCGGACAGTAGA--GCAGAC-------------------------T........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AA-AGCGTAGC--AC--ACACCAT---C......................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................ATCCGGACAGTAGA--GCAGAC-------------------------TGCA--GG.................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGTGCC---TGTGGAGG---CGCGTGGAG----------A------2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAAGCAAAACACTAACCACACCTGGTAATCTTTTGAACATCGCGAACGTGGTAAGTAA--GG---------TCG-ATGGGC--GGCAG--GGTTAA--CTGACTCTC-----AA-TAC-------------AGACCGA--AAAGTGCCGAA-AGTGTAGC--AC--ACACCAT---TT-CACTCCAATTGGT-TGC-AC---------------------------------------AAA---AATCCAGACGGGACTGAACCT-G------AACTT-GAAACAA-TGTTTCG--TC-ATT-GAAAC--------CACACAACACTT-AAAACAATCCGGACAGTAGA--GCAGAC-------------------------TGCA--GGCTTAATTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGACTTGCC---TGGGGAGG---CGCGTGAAG----------A------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................GAACATCGCGAACGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..................CACCTGGTAATCTTTTGAACAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CG-A--TTAAACATTCCCTTGAA---AT............................................................................2211.00100001000000000000
................................................................................................................................................................................................................................................................................................................................................TCCGGACAGTAGA--GCAGAC-------------------------TGC......................................................................................................................................2211.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCATTGACTTGCC---TG...................................1811.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................GACAGTAGA--GCAGAC-------------------------TGC......................................................................................................................................1811.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................CGGACAGTAGA--GCAGAC-------------------------T........................................................................................................................................1811.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................AATCCGGACAGTAGA--GCAGAC-------------------------TGC......................................................................................................................................2411.00100100000000000000
.....................................................................................................................................................................................................................................................ATCCAGACGGGACTGAACC...............................................................................................................................................................................................................................................................1911.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCATTGACTTGCC---TGGGGAGG---CGC.......................2711.00101000000000000000
.....................................................................................................................................................................................................................................................ATCCAGACGGGACTGAACCT-.............................................................................................................................................................................................................................................................2011.00100100000000000000
droSec2
CAAGCAAAACACTAACCACACCTGGTAATCTTTTGAACATCGCGAACGTGGTAAGTAA--GG---------TCG-ATGGGC--GGCAG--GGTTTA--CTGACTCTC-----AA-TAC-------------AGACCGA--AAAGTGCGGAA-AGTGTAGC--AC--ACACCAT---TT-CACTCCAATTGCT-TAC-AC---------------------------------------AAA---AATCCAGACGGGACTGAACCT-G------TACTT-AAAACAA-TGTATCG--TC-ATT-GAAAG--------CACACAACACTT-AAAACAATCCGGACAGTAGA--GCAGAC-------------------------TGCA--GGCTTAATTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGACTTGCC---TGGGGAGG---CGCGT---G----------A------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CAAGCCAAACACTAACCACACCTGGTAATCTATTGAACATCGCGAACGTGGTAAGTAA--GG---------TCG-AG-GGCC-AGCAGCGTGTTAA--CTGACTCTC-----AG-GAC-------------GTACCGA--AAAGTGCCGAA-TGTGTGGC--AC--ACAT------CT-CACTCCAATTGGT-TGC-AC---------------------------------------ACG--AAACCACGACGAGACTGAAT-T-A------AACTG-CAAACGA-TGTTTTG--TC-ATT-GAAAG--------CACACAAACCTT-ACAACAATTCGGACAGTAGG--GCAGAC-------------------------TGCA--GGCTTAAGTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATGCAGGCTAGCGACAGCGAAGATTCCATTGACGTGCC---TGGGGAGG---CG------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................GTGTTAA--CTGACTCTC-----AG-GAC-------------GTACC...............................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.....................................................AGTAA--GG---------TCG-AG-GGCC-AGCAGCGTGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
droEre2
CAAGCAAAACACTAACCACACCTGGTAATCTTTTGAACATCGCGAACGTGGTAAGTAA--GG---------TCG-AGGGG-C-GGCAG--GGTTAA--CTGACTCTC-----AA-TAC-------------GGACCGA--AAAGTGCCGAA-AGTGTAGC--AC--ACAT-AT---CA-CACTCCAATTGGT-TGC-AC---------------------------------------ACA---AACCCCGACGGGACTGAAC-T-A------AACTGCAAAACGA-TGTTCCG--TC-ATT-GGATG--------CACACAA-ACCT-AAAACCATTCGGACAGTAGG--GCAGAC-------------------------TGCA--GGCTTAAGTGCAG---------GCTGTCG-A--TTAAACATTCCCTTGAA---ATTCAGGCTAGCGACAGCGAAGATTCCATTGACGTGCC---TGGGGAGG---CG------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCCCTTGAA---ATTCAGGCTA....................................................................2411.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................GCA--GGCTTAAGTGCAG---------GCTGTC.......................................................................................................2211.0011000000

Generated: 05/16/2015 at 08:29 PM