ID:

dvi_15114

 Coordinate:

scaffold_13047:1527769-1527919 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.5

Flybase annnotation

CDS [Dvir\GJ23682-cds]; exon [dvir_GLEANR_9016:2]; intron [Dvir\GJ23682-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGAATGGCCAGGAACCCAAAAATAAAACAGCTGTCAGCGCTGGCGAAGAGGTAAGCTAATCGCTTTTGGGAGCGGGGTGGGGTAACTGGGCCGACAGACAGAGAAGGCCGAGTTGAAGAGACAAACAGAATTAACGACGGATTCCAAAATGAAATATGAAATATGATATAGCCTGATGGCTGGCTCTGCAGCCCGGCCGGTTTATTTTTAAACACAGAACCGGAAATTTACGCTTTAAGAAATTTTTTCAA
****************************************************************............((....(((((.((((.............)))).))))).....))..............******************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060679
140x9_testes_total
 SRR060658
140_ovaries_total
 M061
embryo
 SRR060671
9x160_males_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 V116
male body		 SRR060662
9x160_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 SRR060660
Argentina_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 SRR060674
9x140_ovaries_total
...........GAACCCAAAAATAAAACAGCT........................................................................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTTGGGAGCGGGGTGGGGTAACTG................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................AAGAGACAAACAGAATTAACG................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................ATCGCTTTTGGGAGCGGGGTGTA.......................................................................................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AAATATGATATGGCCTGATG......................................................................... 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................GAGCGGGGTGGGGTAACTGGGC................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............ACCCAAAAATAAAACAGCTGTCAGC..................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ATAAAACAGCTGTCAGCGC................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AACAGAATTAACGCCGGTT............................................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................TCGCTAGCGAAGAGGGAAGC................................................................................................................................................................................................... 20 3 5 0.40 2 0 0 0 0 0 0 0 1 0 1 0 0 0 0
....................................................AAGCTAGTCGCTGTTGGG..................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..AAAGGCCAGGAACCGTAAAA..................................................................................................................................................................................................................................... 20 3 11 0.18 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................TTACGGTTTAAGAAATGT...... 18 2 14 0.14 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0
................................................................................................................................AATTTACTACGGATCCCAAA....................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................CAGACAGAAAGGGCCGAG........................................................................................................................................... 18 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................CCAATTGAAGAGACAACCAG........................................................................................................................... 20 3 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

GCTTACCGGTCCTTGGGTTTTTATTTTGTCGACAGTCGCGACCGCTTCTCCATTCGATTAGCGAAAACCCTCGCCCCACCCCATTGACCCGGCTGTCTGTCTCTTCCGGCTCAACTTCTCTGTTTGTCTTAATTGCTGCCTAAGGTTTTACTTTATACTTTATACTATATCGGACTACCGACCGAGACGTCGGGCCGGCCAAATAAAAATTTGTGTCTTGGCCTTTAAATGCGAAATTCTTTAAAAAAGTT
*******************************************************************************************************************............((....(((((.((((.............)))).))))).....))..............**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060687
9_0-2h_embryos_total
 SRR1106727
larvae
 SRR060679
140x9_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060672
9x160_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
...........................................................................................GCTGTCTGTCTCTTCCGGCTC........................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................TGGCTGCCTAAGGTTTTA..................................................................................................... 18 1 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCTTGGCCTTAGAATGC................... 17 2 3 0.33 1 0 0 1 0 0 0 0 0
....................TTATTTTGATGACAGTGGCG................................................................................................................................................................................................................... 20 3 11 0.09 1 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................CAAAAAAAAATTTGTGCCT................................. 19 2 12 0.08 1 0 0 0 0 1 0 0 0
....................................................................................................................................TAGCCGCCTAAGGTCTTAC.................................................................................................... 19 3 15 0.07 1 0 0 0 0 0 1 0 0
..............................................................................CCCCATTGGGCCGGCGGT........................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................................TTCTTGGCCTTAGAATGC................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:1527719-1527969 + dvi_15114 CGAATGGCC------------------------------AGG-----AACCCAAAAATAAAA---CAGCTGTCAGCG---------------CTGGC-GAAGAGGTAAGCTAATC-----------GCTTTT-----------------G--------GGAGCGGG-------G--TGG-----------------------------------G-GTAACTGGGCCGAC---AG-----------------------------------AC-----AGA--------GA------------AGGCC---------------------------------------------------GAG------------TTGAAGAGACAAACAGAATTAA------C-G-----------------------------ACGGA----TTCCAA----------------------------------------AATGAAATATGAAATATGATATAGC------C-------------------------------------------------------------------------------------------TGATGGC------------TGGCTCTGCAGC----------------CCGGC-CGGTTTATTTTTAA-ACACAGAACCGGAAATTTAC-GCTTTAAGAA-A-TTT-TTTCAA
droMoj3 scaffold_6540:5621335-5621618 + CGAATGGGC------------------------------AGG-----CAGCCAAAAATAAAA---CAGCTGTCAGCG---------------CTGGC-GAGGAGGTAAGCTAATC-----------CCTAA-----------------------AG--AGAC-------C------CCG-----------------------------------A-GTAACTGGGACACC---AAAGTCACACAAA---------------------------------------------------A-----GACC---------------------------------------------------GGC------------CTCAAGTGA-------------GGTGCCT-GAATGCCTGACTGACT-AACT-----GACTAACTGTCTGTCTGTCTGGCTGGTTGACGGAGCGGCAGACA-------CAGCTG-AAATGTAA-------TGTGATATG------------------------------------------------------------------------------------------------------ATGGCTATGCA----------------GC----------------TCGGC-CGGTTTATTATTAAAAC--AGAACCGGAAATTTAC-GCTTTTAAGACATTTTTT-----
droGri2 scaffold_14906:4706561-4706814 - CGAGCGGAC------------------------------AGG-----CAGCCAAAAATAACA---CAGCTGTCAGCG---------------CTGGC-GAGGAGGTAAGCTAATA-----------ACTGG---------------------CCCC-AA-GC-------C------GAG-----------------------------------A-GGAATTGGGCCAGC---G----------------------------------------------------------GACAAAG----GACCG-------------------------A-CCGGCTCCAAAGTCAC----TT----------------C---------------------------T-G--------ACGCACCCAAGT-----TATT----------TCAAA-AAGTCGTCACCGAAA-----AAGCAAAAACAAAAATC-AAATGAAA-------TATGAGC-----------------------------------------------------------------------------------------------------------------------------------------------------TTGGT-CGCTTTATTTTTAT-AC--AGAACCGGAAATTTGCCGCTTTAAGAC-A-TTT-TTGTAT
droWil2 scf2_1100000004943:8555846-8556158 - TGAATGCCG-----------------------------------------TTGCGAATAAAA---CAGCTGTCGA-G---------------AAGTTGAAGGAGGTAAGTAATGT-----------ACTTT----------------CAA--------AGAGAAGG-------G--TAA-----------------------------------ACCAAACTGGGACAAC---G----------------------------------------------------------GACA------AAGCC-----------------------------------------C---------GGC------------TTG------------------ACAACTCT-G--------ACGCACT-AAGT-----AA-----------------------------------------------------------TGAAA-------TATGAGCCAACAACAGTCCAAGACAAGACGAAAGTCAAGTTTCTGAACCGCACCACCTCACACCATCTTCAGCTCAGCTCACCCCGCGCCTCAACGCTTCAAAACGATCCGTTGTC------------TGGCGT--CGTCAAAATGC------AG-T-TTT-TCGTTTATTTTTAAAAC--AGAACCGGAAATTTTC-A------------AATTT-----
dp5 2:6920966-6921273 - TGAGTGGAT------------------------------CGG-----AACCCAGAAATAAAA---CATCTGTCAGAGCTGCTGC---TGCTGCTGGC-GAGGAGGTAAGTTAAGT-----------GGTACTCCCCCCCCCGATGACAGGGGCCTG-A-------GG------------------------------------------TGCCGG-GTAACTGGGCCAGG---GGACGACGACAAG---------------------------------------------------AGCCC----C------------------------------GA-----A-CCCAA----CCTGACAT--------GAC---------------------------T-GACGCACTGAGGCATT-AAGT-----AACGA--------CCCCGA---------------------GAGCCCA-------TGC-CAATGAAA-------TACGATCCG------------------------------------------------------------------------------------------------------ACG---T----TGAATCGGGTTCTGTGCCCAGGCTC------AG-A-TGT-TGGCTTATTTTTAT-AC--AGAACCGGAAATTTAC-GCTCTGCACAAACTGTTT-----
droPer2 scaffold_0:777330-777639 - TGAGTGGAT------------------------------CGG-----AACCCAGAAATAAAA---CATCTGTCAGAGCTGCTGCTGCTGCTGCTGGT-GAGGAGGTAAGTTAAGT-----------GGTAGTCCCC-TCCCGATGACAGGGGCCTG-A-------GG------------------------------------------TGCCGG-GTAACTGGGCCAGG---GGACGACGACAAG---------------------------------------------------AGCCC----C------------------------------GA-----A-CCCAA----CCTGACAT--------GAC---------------------------T-GACGCACTGAGGCATT-AAGT-----AACGA--------CCCCGA---------------------GAGCCCA-------TGC-CAATGAAA-------TACGATCCG------------------------------------------------------------------------------------------------------ACG---T----TGAATCGGGTTCTGTGCCCAGGCTC------AG-A-TGT-TGGCTTATTTTTAT-AC--AGAACCGGAAATTTAC-GCTCTGCACAAACTGTTT-----
droAna3 scaffold_13340:23422327-23422556 + TAAGTGATC------------------------------TGG-----TCTCCCCAAATAAGA---CACATGTCGT-A---------------AAGGTG---------AGTGAGTCGAAGGGAATAA------------------------A---TAA-A--G-------G---T-TGGG-----------------------------------G-GTAACTGGGCTAAA---AAC-------------------TTTT------------A-----AGA--------ACGGGACAAAGCCC----CA-------------------------GACAAA-----A-ACCAC----TCGGATTTTTTTTTTTGAC---------------------------T-G--------ACGCAC-------------------------------------------------------------------------GAAA-------TACGATCCG------------------------------------------------------------------------------------------------------ATG-CATTTTT----------------------------------T-TTT-TGGTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTTATGTA---CGTTT-----
droBip1 scf7180000396395:425849-426067 + TC-------------------------------------TGG-----TCTCCCAAAATCAGA---CACATGTCGT-A---------------AAGGTG---------AGTGAGTCGAAGGGAATAAACCTT----------------AAAAGCCGA-A-------AAT-G---T--TGG-----------------------------------G-GTAACTGGGCTAAA---AAG-------------------TTTT------------A-----AGA--------ACGGGACAAAGCCC----CA-------------------------GA--CA-----A-ACCAC----TCGGGTTT--------GAC---------------------------T-G--------ACGCAC-------------------------------------------------------------------------GAAA-------TACGATCCG------------------------------------------------------------------------------------------------------ATG-C-----A----------------------------------T-TTT-TGGTTTATTTTTAT-CC--AGAACCGGAAATTTAC-GCTTTACGTA---CGTTT-----
droKik1 scf7180000300058:108840-109092 + CAGAGCTAC-AGGAG------------------------ATG-----TGTCCAAAAATAAGA---CAGCTGTCGT-A---------------AAGGTG---------AGTTGGCCAAAAAGAATCA-----------------------AAGCCAC-A-------CAAGG------GGG-----------------------------------A-GTAACTGGGCCAGGCTA-------------A-------------------------------GG--------ACCGGACA------AAG------------------------------------------CCACTCAGCCTGAGA---CT----GAC---------------------------T-G--------ACGCACATGG----AGTAACGAACG-------------------------------------------CCGGTT-GAGTGAAA-------TATGAGCCA------------------------------------------------------------------------------------------------------GTG-C-----A---------------------TTCTATTTTTTTTT-TTT-TGGTTTATTTTTAC-ACCAAGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----
droFic1 scf7180000453812:55421-55709 + TGAGGGGAG---G--------------------------CGGCAGCCTTTCCACAAATAAGACGACAGCTGTCGT-A---------------AAGGTG---------AGTTGGCCAA-------------------------------------CAA-C--------T--------GGGGGTAACTGGTAGCTGGTAGCTGGTAACTGGTAACTG-GTAACTGGGCCAGGCTG-------------A----GAGCCGGGAG---------AC-----AGA--------ACGGGACA------AAGCC------------------------------GA-----A-ACCAC----TTCGACTGG--------ATG------------------GA------C-GACGCACTGACGCACT-CAGT-----AACGAAATG----CCCCG---------------------------------CCGA-CGAGGTGAAA-------TACGAGCCA------------------------------------------------------------------------------------------------------ATG-C-----A----------------------------------T-TTC-GGGTGTATTTTTAC-TC--AGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----
droEle1 scf7180000490994:739387-739619 - TAAGGGGCGGAGGAGGCGGAGG-----------------AGG---ACTGTCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA-------------------------------------AAA-C--------T----GG--GGG-----------------------------------G-GTAACTGGGCCAGGCTT-------------TTTG---GCCGGGAA---------AC-----AGG--------ACGGGACA------AAGCC---------------------------------------------------GACT---------GAG---------------------------T-G--------ACGCACT-GAGTAACATAAAGAATG--------------------------------------------------AAATGAAA-------TACGAGCCA------------------------------------------------------------------------------------------------------ATG-C-----A----------------------------------T-TTTTCGGTTT-TTTTTAA-CC--AGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----
droRho1 scf7180000777405:102837-103086 + TGAGGGGAG---G--------------------------AGG---ACCGTCCAAAAACAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA-------------------------------------AAA-C--------T--------GGGGG----------------------------TAACTG-GTAACTGGGCCAGGCTA-------------A----GAGCCGGGAA---------AC-----AGA--------ACGGGACA------AAGCC------------------------------GA-----A-ACCAC----TCCGACTGG--------AC---------------------------T-G--------ACGCACT-GGGTA-CGTAACGAACGA----CCCCAG---------------------C-G--------CCAGTC--GGTGAAA-------TACGAGCCA------------------------------------------------------------------------------------------------------ATG-C-----A----------------------------------T-TTT-CGTTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----
droBia1 scf7180000302402:736045-736276 - CCGGAGGAC------------------------------TGG-----TGGCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA-------------------------------------CAA-A-TC-------G------GTG-----------------------------------G-GTAACTGGGCTAAG---------------------GAGCCCGG------------C-----AGA--------GCGGGACG------AGGTG------------------------------GA-----A-ACCAC----TCCGACTGG--------CT---------------------------T-G--------ACGCATT-AAGTA-CG--AGGAACGA----CCCCAG---------------------A---------------C--GCTGAAA-------TACGAGCCAAG------C-------------------------------------------------------------------------------------------------CAATGCA----------------------------------T-TTT-CGGTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTTAAAAG---TGTTT-----
droTak1 scf7180000415256:475181-475423 - TGGAGA---------------------------------GGG-----TGTCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAACA-GAACAA-----------------------AAA--CAA-A-AC-------G------GTG-----------------------------------G-GTAACTGGGCCAGGCTA-------------A--G-GATCCGG-AG---------TC-----------------TCGGACA------AAGTCG-------------------------ACTCGA-----A-ACCAC----TTCGA-------------C---------------------------T-G--------ACGCATT-AAGTGGCGTACA----GA----CCCCAG---------------------A---------------C--ACTGAAA-------TACGATCCG------------------------------------------------------------------------------------------------------ATGGCAATGCA----------------------------------T-TTT-CGGTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----
droEug1 scf7180000409804:1224861-1225142 - TGAGAGGAG---A------------AGGAGGAGTAG---CGG-----TGTCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA---------------------------------A---CAA-AGACC----CCG------GTG-----------------------------------G-GTAACTGGGCCAGG---GGC----------CAAGAAATCAGGGAAATACAAAATAC-----AGA--------ACGGGACA------AAGCCG-------------------------A-CGGGACCCAA-A----------CGACTGG--------TT---------------------------T-GACGCACTGACGCATT-AAGT-----AACTACCAA----TCCCAG---------------------A---------------CACATTAAAA-------TACGAGCCAGT------C-------------------------------------------------------------------------------------------------CAATGCA----------------------------------T-TTC-GGGTTTATTTTTAC-CCCAAGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----
dm3 chr3R:14976939-14977278 - TGGGTGCAG---GAGCTGGAGCAGCACGAGGAGTGCCGGTGG-----CTGCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA---------------------------------AA--CAA-A-AC-------GCTGGGCATG-----------------------------------G-GTAACTGGGCCAGGCCA-------------AAAGAGAGCCGGGCA---------ACGGGGCAGAATGGTACAACGGGACA------AAACCAAAACCAAAACCAAAACCAAAACCAAAACCAA-----A-ACCAC----TCCGACTGGAAT----CAC---------------------------T-GACGCACTGACGCACT-AAGT-----AACGAACGA----CCCAAG---------------------A---------------A--GCTGAAA-------TACGAGCCAGG------C-------------------------------------------------------------------------------------------------CAA-------------------------ATGCATTACTGCAT-TTT-GGGTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----
droSim2 3r:6281028-6281331 + dsi_24954 CTGGCGG-C-AGGAGCTGGAGCAGCACGAGGAGTGCCGGTGG-----CGGCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA---------------------------------A---CAA-A-AC-------GCTGGGCATG-----------------------------------G-GTAACTGGGCCAGGCCA-------------AAAGAGAGCCGGGCA---------AC-----GGG-----ACAACTCGACA------AAGCCA-------------------------GACCAA-----A-ACCAC----TCCGACTGGAAT----CA-------------------------CACTGGACGCACTGACGCACT-AAGT-----AACGAACGA----CCCCAG---------------------A---------------A--GCTGAAA-------TACGAGCCAGG------C-------------------------------------------------------------------------------------------------CAA-------------------------ATGCATTACTGCAT-TTC-GGGTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTT----------TTT--CAA
droYak3 3R:3658139-3658448 - TGAGGGCAG---GAGCTGCAGCAGCAGGAGGAGTGGGAGAGG-----TGGCCAGAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA-------------------------------------CAA-A-TC-------GCTGTGTTGG-----------------------------------G-ATAACTGGGCCAGGCCA-------------AAAGAGAGCCGGAAA---------A-GGTGCAGAACGGCAC--CGGGACA------AAGCCG--------------------------ACCGA-----A-ACCAC----TCCGACTGGAAT----C---------------------GACG-CACT-GTCGCACTGACGCACT-AAGT-----AACAAACGA----CCCCAG---------------------A---------------A--GCTGAAA-------TACGAGCCA--------C-------------------------------------------------------------------------------------------------CAA--------------------------TGCATTACTGCAT-TTT-CGGTTTATTTTCAC--C--AGAACCGGAAATTTAC-GTTTTAAAAG---TGTTT-----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CGAATGGCC------------------------------AGG-----AACCCAAAAATAAAA---CAGCTGTCAGCG---------------CTGGC-GAAGAGGTAAGCTAATC-----------GCTTTT-----------------G--------GGAGCGGG-------G--TGG-----------------------------------G-GTAACTGGGCCGAC---AG-----------------------------------AC-----AGA--------GA------------AGGCC---------------------------------------------------GAG------------TTGAAGAGACAAACAGAATTAA------C-G-----------------------------ACGGA----TTCCAA----------------------------------------AATGAAATATGAAATATGATATAGC------C-------------------------------------------------------------------------------------------TGATGGC------------TGGCTCTGCAGC----------------CCGGC-CGGTTTATTTTTAA-ACACAGAACCGGAAATTTAC-GCTTTAAGAA-A-TTT-TTTCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................G-----AACCCAAAAATAAAA---CAGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000002000000000000000000000000000000000
.................................................................................................................................TTT-----------------G--------GGAGCGGG-------G--TGG-----------------------------------G-GTAACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................AAGAGACAAACAGAATTAA------C-G-----------------------------..................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
................................................................................................................ATC-----------GCTTTT-----------------G--------GGAGCGGG-------G--TGT-----------------------------------A-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000001000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GAGCGGG-------G--TGG-----------------------------------G-GTAACTGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................ACCCAAAAATAAAA---CAGCTGTCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................ATAAAA---CAGCTGTCAGCG---------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
CGAATGGGC------------------------------AGG-----CAGCCAAAAATAAAA---CAGCTGTCAGCG---------------CTGGC-GAGGAGGTAAGCTAATC-----------CCTAA-----------------------AG--AGAC-------C------CCG-----------------------------------A-GTAACTGGGACACC---AAAGTCACACAAA---------------------------------------------------A-----GACC---------------------------------------------------GGC------------CTCAAGTGA-------------GGTGCCT-GAATGCCTGACTGACT-AACT-----GACTAACTGTCTGTCTGTCTGGCTGGTTGACGGAGCGGCAGACA-------CAGCTG-AAATGTAA-------TGTGATATG------------------------------------------------------------------------------------------------------ATGGCTATGCA----------------GC----------------TCGGC-CGGTTTATTATTAAAAC--AGAACCGGAAATTTAC-GCTTTTAAGACATTTTTT-----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................CTAATC-----------CCTAA-----------------------AG--AGAC-------C------CCG-----------------------------------A-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
CGAGCGGAC------------------------------AGG-----CAGCCAAAAATAACA---CAGCTGTCAGCG---------------CTGGC-GAGGAGGTAAGCTAATA-----------ACTGG---------------------CCCC-AA-GC-------C------GAG-----------------------------------A-GGAATTGGGCCAGC---G----------------------------------------------------------GACAAAG----GACCG-------------------------A-CCGGCTCCAAAGTCAC----TT----------------C---------------------------T-G--------ACGCACCCAAGT-----TATT----------TCAAA-AAGTCGTCACCGAAA-----AAGCAAAAACAAAAATC-AAATGAAA-------TATGAGC-----------------------------------------------------------------------------------------------------------------------------------------------------TTGGT-CGCTTTATTTTTAT-AC--AGAACCGGAAATTTGCCGCTTTAAGAC-A-TTT-TTGTATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TGAATGCCG-----------------------------------------TTGCGAATAAAA---CAGCTGTCGA-G---------------AAGTTGAAGGAGGTAAGTAATGT-----------ACTTT----------------CAA--------AGAGAAGG-------G--TAA-----------------------------------ACCAAACTGGGACAAC---G----------------------------------------------------------GACA------AAGCC-----------------------------------------C---------GGC------------TTG------------------ACAACTCT-G--------ACGCACT-AAGT-----AA-----------------------------------------------------------TGAAA-------TATGAGCCAACAACAGTCCAAGACAAGACGAAAGTCAAGTTTCTGAACCGCACCACCTCACACCATCTTCAGCTCAGCTCACCCCGCGCCTCAACGCTTCAAAACGATCCGTTGTC------------TGGCGT--CGTCAAAATGC------AG-T-TTT-TCGTTTATTTTTAAAAC--AGAACCGGAAATTTTC-A------------AATTT-----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................GTCGA-G---------------AAGTTGAAGGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
........................................................ATAAAA---CAGCTGTCGA-G---------------AAGTTGAAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
.....................................................CGAATAAAA---CAGCTGTCGA-G---------------AA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.....................................................................................................................................................A--------AGAGAAGG-------G--TAA-----------------------------------ACCAAACTGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.....................................................................TGTCGA-G---------------AAGTTGAAGGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...........................................................AAA---CAGCTGTCGA-G---------------AAGTTGAAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
........................................................ATAAAA---CAGCTGTCGA-G---------------AAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
TGAATGCCG-----------------------------------------TTGCGAATAAAA---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
......................................................GAATAAAA---CAGCTGTCGA-G---------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.....................................................................TGTCGA-G---------------AAGTTGAAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
TGAATGCCG-----------------------------------------TTGCGAATAAAA---C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
dp5
TGAGTGGAT------------------------------CGG-----AACCCAGAAATAAAA---CATCTGTCAGAGCTGCTGC---TGCTGCTGGC-GAGGAGGTAAGTTAAGT-----------GGTACTCCCCCCCCCGATGACAGGGGCCTG-A-------GG------------------------------------------TGCCGG-GTAACTGGGCCAGG---GGACGACGACAAG---------------------------------------------------AGCCC----C------------------------------GA-----A-CCCAA----CCTGACAT--------GAC---------------------------T-GACGCACTGAGGCATT-AAGT-----AACGA--------CCCCGA---------------------GAGCCCA-------TGC-CAATGAAA-------TACGATCCG------------------------------------------------------------------------------------------------------ACG---T----TGAATCGGGTTCTGTGCCCAGGCTC------AG-A-TGT-TGGCTTATTTTTAT-AC--AGAACCGGAAATTTAC-GCTCTGCACAAACTGTTT-----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................AATAAAA---CATCTGTCAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.......................................................AATAAAA---CATCTGTCAGAGCTGCTGC---TGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
.GAGTGGAT------------------------------CGG-----AACCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................................................................................................................................................................................................................CCGG-GTAACTGGGCCAGG---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...............................................................................GCTGC---TGCTGCTGGC-GAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................AATAAAA---CATCTGTCAGAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAATTTAC-GCTCTGCACA.............2111.0010100000000
droPer2
TGAGTGGAT------------------------------CGG-----AACCCAGAAATAAAA---CATCTGTCAGAGCTGCTGCTGCTGCTGCTGGT-GAGGAGGTAAGTTAAGT-----------GGTAGTCCCC-TCCCGATGACAGGGGCCTG-A-------GG------------------------------------------TGCCGG-GTAACTGGGCCAGG---GGACGACGACAAG---------------------------------------------------AGCCC----C------------------------------GA-----A-CCCAA----CCTGACAT--------GAC---------------------------T-GACGCACTGAGGCATT-AAGT-----AACGA--------CCCCGA---------------------GAGCCCA-------TGC-CAATGAAA-------TACGATCCG------------------------------------------------------------------------------------------------------ACG---T----TGAATCGGGTTCTGTGCCCAGGCTC------AG-A-TGT-TGGCTTATTTTTAT-AC--AGAACCGGAAATTTAC-GCTCTGCACAAACTGTTT-----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................ACGACGACAAG---------------------------------------------------AGCCC----C------------------------------GA-----A-CCCAA----CCT.............................................................................................................................................................................................................................................................................................................................................................................2811.001100000
............................................................................................................................................................................................................................................CGACGACAAG---------------------------------------------------AGCCC----C------------------------------GA-----A-CCCAA----C...............................................................................................................................................................................................................................................................................................................................................................................2511.001100000
......................................................................GTCAGAGCTGCTGCTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501010000
droAna3
TAAGTGATC------------------------------TGG-----TCTCCCCAAATAAGA---CACATGTCGT-A---------------AAGGTG---------AGTGAGTCGAAGGGAATAA------------------------A---TAA-A--G-------G---T-TGGG-----------------------------------G-GTAACTGGGCTAAA---AAC-------------------TTTT------------A-----AGA--------ACGGGACAAAGCCC----CA-------------------------GACAAA-----A-ACCAC----TCGGATTTTTTTTTTTGAC---------------------------T-G--------ACGCAC-------------------------------------------------------------------------GAAA-------TACGATCCG------------------------------------------------------------------------------------------------------ATG-CATTTTT----------------------------------T-TTT-TGGTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTTATGTA---CGTTT-----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TC-------------------------------------TGG-----TCTCCCAAAATCAGA---CACATGTCGT-A---------------AAGGTG---------AGTGAGTCGAAGGGAATAAACCTT----------------AAAAGCCGA-A-------AAT-G---T--TGG-----------------------------------G-GTAACTGGGCTAAA---AAG-------------------TTTT------------A-----AGA--------ACGGGACAAAGCCC----CA-------------------------GA--CA-----A-ACCAC----TCGGGTTT--------GAC---------------------------T-G--------ACGCAC-------------------------------------------------------------------------GAAA-------TACGATCCG------------------------------------------------------------------------------------------------------ATG-C-----A----------------------------------T-TTT-TGGTTTATTTTTAT-CC--AGAACCGGAAATTTAC-GCTTTACGTA---CGTTT-----SizeHit CountTotal NormTotal
No Reads
droKik1
CAGAGCTAC-AGGAG------------------------ATG-----TGTCCAAAAATAAGA---CAGCTGTCGT-A---------------AAGGTG---------AGTTGGCCAAAAAGAATCA-----------------------AAGCCAC-A-------CAAGG------GGG-----------------------------------A-GTAACTGGGCCAGGCTA-------------A-------------------------------GG--------ACCGGACA------AAG------------------------------------------CCACTCAGCCTGAGA---CT----GAC---------------------------T-G--------ACGCACATGG----AGTAACGAACG-------------------------------------------CCGGTT-GAGTGAAA-------TATGAGCCA------------------------------------------------------------------------------------------------------GTG-C-----A---------------------TTCTATTTTTTTTT-TTT-TGGTTTATTTTTAC-ACCAAGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----SizeHit CountTotal NormTotal
No Reads
droFic1
TGAGGGGAG---G--------------------------CGGCAGCCTTTCCACAAATAAGACGACAGCTGTCGT-A---------------AAGGTG---------AGTTGGCCAA-------------------------------------CAA-C--------T--------GGGGGTAACTGGTAGCTGGTAGCTGGTAACTGGTAACTG-GTAACTGGGCCAGGCTG-------------A----GAGCCGGGAG---------AC-----AGA--------ACGGGACA------AAGCC------------------------------GA-----A-ACCAC----TTCGACTGG--------ATG------------------GA------C-GACGCACTGACGCACT-CAGT-----AACGAAATG----CCCCG---------------------------------CCGA-CGAGGTGAAA-------TACGAGCCA------------------------------------------------------------------------------------------------------ATG-C-----A----------------------------------T-TTC-GGGTGTATTTTTAC-TC--AGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----SizeHit CountTotal NormTotal
No Reads
droEle1
TAAGGGGCGGAGGAGGCGGAGG-----------------AGG---ACTGTCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA-------------------------------------AAA-C--------T----GG--GGG-----------------------------------G-GTAACTGGGCCAGGCTT-------------TTTG---GCCGGGAA---------AC-----AGG--------ACGGGACA------AAGCC---------------------------------------------------GACT---------GAG---------------------------T-G--------ACGCACT-GAGTAACATAAAGAATG--------------------------------------------------AAATGAAA-------TACGAGCCA------------------------------------------------------------------------------------------------------ATG-C-----A----------------------------------T-TTTTCGGTTT-TTTTTAA-CC--AGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----SizeHit CountTotal NormTotal
No Reads
droRho1
TGAGGGGAG---G--------------------------AGG---ACCGTCCAAAAACAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA-------------------------------------AAA-C--------T--------GGGGG----------------------------TAACTG-GTAACTGGGCCAGGCTA-------------A----GAGCCGGGAA---------AC-----AGA--------ACGGGACA------AAGCC------------------------------GA-----A-ACCAC----TCCGACTGG--------AC---------------------------T-G--------ACGCACT-GGGTA-CGTAACGAACGA----CCCCAG---------------------C-G--------CCAGTC--GGTGAAA-------TACGAGCCA------------------------------------------------------------------------------------------------------ATG-C-----A----------------------------------T-TTT-CGTTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----SizeHit CountTotal NormTotal
No Reads
droBia1
CCGGAGGAC------------------------------TGG-----TGGCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA-------------------------------------CAA-A-TC-------G------GTG-----------------------------------G-GTAACTGGGCTAAG---------------------GAGCCCGG------------C-----AGA--------GCGGGACG------AGGTG------------------------------GA-----A-ACCAC----TCCGACTGG--------CT---------------------------T-G--------ACGCATT-AAGTA-CG--AGGAACGA----CCCCAG---------------------A---------------C--GCTGAAA-------TACGAGCCAAG------C-------------------------------------------------------------------------------------------------CAATGCA----------------------------------T-TTT-CGGTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTTAAAAG---TGTTT-----SizeHit CountTotal NormTotal
No Reads
droTak1
TGGAGA---------------------------------GGG-----TGTCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAACA-GAACAA-----------------------AAA--CAA-A-AC-------G------GTG-----------------------------------G-GTAACTGGGCCAGGCTA-------------A--G-GATCCGG-AG---------TC-----------------TCGGACA------AAGTCG-------------------------ACTCGA-----A-ACCAC----TTCGA-------------C---------------------------T-G--------ACGCATT-AAGTGGCGTACA----GA----CCCCAG---------------------A---------------C--ACTGAAA-------TACGATCCG------------------------------------------------------------------------------------------------------ATGGCAATGCA----------------------------------T-TTT-CGGTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----SizeHit CountTotal NormTotal
No Reads
droEug1
TGAGAGGAG---A------------AGGAGGAGTAG---CGG-----TGTCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA---------------------------------A---CAA-AGACC----CCG------GTG-----------------------------------G-GTAACTGGGCCAGG---GGC----------CAAGAAATCAGGGAAATACAAAATAC-----AGA--------ACGGGACA------AAGCCG-------------------------A-CGGGACCCAA-A----------CGACTGG--------TT---------------------------T-GACGCACTGACGCATT-AAGT-----AACTACCAA----TCCCAG---------------------A---------------CACATTAAAA-------TACGAGCCAGT------C-------------------------------------------------------------------------------------------------CAATGCA----------------------------------T-TTC-GGGTTTATTTTTAC-CCCAAGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----SizeHit CountTotal NormTotal
No Reads
dm3
TGGGTGCAG---GAGCTGGAGCAGCACGAGGAGTGCCGGTGG-----CTGCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA---------------------------------AA--CAA-A-AC-------GCTGGGCATG-----------------------------------G-GTAACTGGGCCAGGCCA-------------AAAGAGAGCCGGGCA---------ACGGGGCAGAATGGTACAACGGGACA------AAACCAAAACCAAAACCAAAACCAAAACCAAAACCAA-----A-ACCAC----TCCGACTGGAAT----CAC---------------------------T-GACGCACTGACGCACT-AAGT-----AACGAACGA----CCCAAG---------------------A---------------A--GCTGAAA-------TACGAGCCAGG------C-------------------------------------------------------------------------------------------------CAA-------------------------ATGCATTACTGCAT-TTT-GGGTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTTAAAAA---TGTTT-----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAACGA----CCCAAG---------------------A---------------A--GCTG.......................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000020000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGA----CCCAAG---------------------A---------------A--GCTGAAA-------T............................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100100000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................T-----AACGAACGA----CCCAAG---------------------A---------------A--GCT........................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................ACGGGGCAGAATGGTACAACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.................................................GCCAAAAATAAGA---CAGCTGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................A-AC-------GCTGGGCATG-----------------------------------G-GTAACTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-CC--AGAACCGGAAATTTAC-GCTT...................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.....................................................AAAATAAGA---CAGCTGTCGT-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-------TACGAGCCAGG------C-------------------------------------------------------------------------------------------------CAA-------------------------ATGC..........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................A-----A-ACCAC----TCCGACTGGAAT----CA..............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................................................TAAGA---CAGCTGTCGT-G---------------GAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CAGCACGAGGAGTGCCGGTGG-----C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AC-------GCTGGGCATG-----------------------------------G-GTAACTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GT-----AACGAACGA----CCCAAG---------------------A---------------A--GC.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................GAGGAGTGCCGGTGG-----CTGCCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AG---GAGCTGGAGCAGCACGAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................ACTGGGCCAGGCCA-------------AAAGAGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....GCAG---GAGCTGGAGCAGCACGAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................A-------------AAAGAGAGCCGGGCA---------ACGGGGCAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................TGCCAAAAATAAGA---CAGCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................AGAGCCGGGCA---------ACGGGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..GGTGCAG---GAGCTGGAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAC-CC--AGAACCGGAAATTTAC-GCTT...................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................GCACGAGGAGTGCCGGTGG-----C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........G---GAGCTGGAGCAGCACGAGGAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTACTGCAT-TTT-GGGTTTA....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
......................................................AAATAAGA---CAGCTGTCGT-G---------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGGTGCAG---GAGCTGGAGCAGCACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................GGGCA---------ACGGGGCAGAATGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACCGGAAATTTAC-GCTTT..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................C-------GCTGGGCATG-----------------------------------G-GTAACTGGGCCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AATAAGA---CAGCTGTCGT-G---------------GAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................AGCACGAGGAGTGCCGGTGG-----C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGA----CCCAAG---------------------A---------------A--GCTGAAA-------TA...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
....................GCAGCACGAGGAGTGCCGGTGG-----CG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--AGAACCGGAAATTTAC-GCTT...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT-TTT-GGGTTTATTTTTA..............................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................A-A-AC-------GCTGGGCATG-----------------------------------G-GTAACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................AA---------------------------------AA--CAA-A-AC-------GCTGGGCATG-----------------------------------G-GT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACTGCAT-TTT-GGGTTTA....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................AAATAAGA---CAGCTGTCGT-G---------------GA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................GGAGCAGCACGAGGAGTGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCA---------ACGGGGCAGAATGGTACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................................................TAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................GGCCAA---------------------------------AA--CAA-A-AC-------GCTGGGCATG-----------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAC-CC--AGAACCGGAAATTTAC-GCTTT..................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ACT-AAGT-----AACGAACGA----CCCAAG---------------------A---------------A--GC.........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------A--GCTGAAA-------TACGAGCCAGG------C-------------------------------------------------------------------------------------------------..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--AGAACCGGAAATTTAC-GCTTT..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GCCGGGCA---------ACGGGGCAGAATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................GCAGCACGAGGAGTGCCGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTTAC-CC--AGAACCGGAAA.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.GGGTGCAG---GAGCTGGAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..........................................................AAGA---CAGCTGTCGT-G---------------GAGGTG---------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CCAC----TCCGACTGGAAT----CAC---------------------------T-GACG............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................AA---------------------------------AA--CAA-A-AC-------GCTGGGCATG-----------------------------------G-G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................ATAAGA---CAGCTGTCGT-G---------------GAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
droSim2
CTGGCGG-C-AGGAGCTGGAGCAGCACGAGGAGTGCCGGTGG-----CGGCCAAAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA---------------------------------A---CAA-A-AC-------GCTGGGCATG-----------------------------------G-GTAACTGGGCCAGGCCA-------------AAAGAGAGCCGGGCA---------AC-----GGG-----ACAACTCGACA------AAGCCA-------------------------GACCAA-----A-ACCAC----TCCGACTGGAAT----CA-------------------------CACTGGACGCACTGACGCACT-AAGT-----AACGAACGA----CCCCAG---------------------A---------------A--GCTGAAA-------TACGAGCCAGG------C-------------------------------------------------------------------------------------------------CAA-------------------------ATGCATTACTGCAT-TTC-GGGTTTATTTTTAC-CC--AGAACCGGAAATTTAC-GCTTT----------TTT--CAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................CAA---------------------------------A---CAA-A-AC-------GCTGGGCATG-----------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
......................AGCACGAGGAGTGCCGGTGG-----C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
.......................................................AATAAGA---CAGCTGTCGT-G---------------GA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
droYak3
TGAGGGCAG---GAGCTGCAGCAGCAGGAGGAGTGGGAGAGG-----TGGCCAGAAATAAGA---CAGCTGTCGT-G---------------GAGGTG---------AGTTGGCCAA-------------------------------------CAA-A-TC-------GCTGTGTTGG-----------------------------------G-ATAACTGGGCCAGGCCA-------------AAAGAGAGCCGGAAA---------A-GGTGCAGAACGGCAC--CGGGACA------AAGCCG--------------------------ACCGA-----A-ACCAC----TCCGACTGGAAT----C---------------------GACG-CACT-GTCGCACTGACGCACT-AAGT-----AACAAACGA----CCCCAG---------------------A---------------A--GCTGAAA-------TACGAGCCA--------C-------------------------------------------------------------------------------------------------CAA--------------------------TGCATTACTGCAT-TTT-CGGTTTATTTTCAC--C--AGAACCGGAAATTTAC-GTTTTAAAAG---TGTTT-----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTTTCAC--C--AGAACCGGA...............................2020.50100000010000
......................AGCAGGAGGAGTGGGAGAGG-----TGGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33100000010000
....................GCAGCAGGAGGAGTGGGAGAGG-----T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.33100000010000
..........................GGAGGAGTGGGAGAGG-----TGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.33101000000000
...................................................CAGAAATAAGA---CAGCTGTCGT-G---------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.33100000010000
........................................................................................................................................................................................................................................A-------------AAAGAGAGCCGGAAA---------A-GGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33101000000000
.....GCAG---GAGCTGCAGCAGCAGGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33101000000000
.....GCAG---GAGCTGCAGCAGCAGGAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33101000000000
.......................................................AATAAGA---CAGCTGTCGT-G---------------GAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.33100000010000
..................................................................AGCTGTCGT-G---------------GAGGTG---------AGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.33101000000000
........................................................ATAAGA---CAGCTGTCGT-G---------------GAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33101000000000
................................GTGGGAGAGG-----TGGCCAGAAATAAGA---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100000010000
.................................................................................................................................................................C-------GCTGTGTTGG-----------------------------------G-ATAACTGGGCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33100000010000
...........................................................AGA---CAGCTGTCGT-G---------------GAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.33101000000000
.......................GCAGGAGGAGTGGGAGAGG-----TGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.33100100000000
......................................................................................................................................................................................................................................................AAAGAGAGCCGGAAA---------A-GGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33100100000000
............GAGCTGCAGCAGCAGGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.33100000010000

Generated: 05/19/2015 at 07:05 PM