ID:

dvi_151

 Coordinate:

scaffold_13324:1051814-1051865 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Jockey2LINEJockey-
mature
  1. scaffold_13049:25118595-25118618 +
  2. scaffold_13050:1879261-1879284 -
  3. dvi_151  scaffold_13324:1051841-1051864 +
star

Sense Strand Reads

TTCACTCGTGCAAAGCAGAGAACCAGTCATATGAGAGCCAGCTCATTTGCCACAAATTGGGTCCTGGAGACAATCTTTTTTGGAATGACCGAAGGTGTGGCATCTTAGACATTGTAGAACGCTCCACTGAGACTCTGTATCTGCCGAGTTGT
***********************************......((....(((((((..((.(((((((((((......)))))))...)))).))..)))))))....)).........*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 M047
female body
 SRR060676
9xArg_ovaries_total
 SRR060655
9x160_testes_total
 SRR060658
140_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060689
160x9_testes_total
 SRR060657
140_testes_total
 SRR060679
140x9_testes_total
 SRR060683
160_testes_total
 SRR060656
9x160_ovaries_total
 SRR060673
9_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060670
9_testes_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060654
160x9_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060680
 9xArg_testes_total
 M061
embryo
 V116
male body		 SRR060681
Argx9_testes_total
 M027
male body		 SRR060684
140x9_0-2h_embryos_total
 V047
embryo
 SRR060659
Argentina_testes_total
 SRR060666
160_males_carcasses_total
 V053
head
.............................................................................TTTTGGAATGACCGAAGGTGTGGC................................................... 24 0 3 75.67 227 33 9 12 13 2 0 12 6 0 14 11 5 5 6 1 15 15 1 13 13 4 15 6 2 1 4 2 3 1 0 0 3 0 0 0
..............................................................................TTTGGAATGACCGAAGGTGTGGC................................................... 23 0 3 35.67 107 4 2 0 12 22 2 1 22 7 0 2 0 11 0 5 1 0 3 2 6 0 1 1 0 3 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGAACCAG.............................................................................................................................. 26 0 5 33.60 168 34 0 34 1 0 29 0 0 0 0 6 6 0 11 4 3 0 14 0 0 9 0 5 2 0 4 0 0 6 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTGG.................................................... 23 0 3 23.00 69 13 18 2 6 1 0 6 1 1 4 1 1 0 1 1 1 2 0 2 1 1 0 1 0 0 0 3 1 0 0 1 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTG..................................................... 22 0 3 22.33 67 20 2 2 10 0 0 10 0 0 3 5 1 0 3 3 1 2 0 1 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGAACCAGT............................................................................................................................. 27 0 5 14.80 74 7 0 13 0 0 14 0 0 0 0 6 9 0 3 1 2 1 5 0 0 3 0 2 6 0 1 0 0 1 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGAACCAGTC............................................................................................................................ 28 0 5 13.60 68 13 0 12 0 0 10 0 0 0 0 0 1 0 5 0 1 0 5 0 0 8 0 5 6 0 1 0 0 1 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGT...................................................... 21 0 3 9.33 28 5 0 1 5 0 0 7 0 0 2 0 1 0 0 4 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................TTTGGAATGACCGAAGGTGTG..................................................... 21 0 3 9.00 27 1 0 0 2 11 0 1 4 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTGGCA.................................................. 25 0 3 8.00 24 1 14 2 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................TTGGAATGACCGAAGGTGTGGC................................................... 22 0 3 8.00 24 1 0 0 0 0 1 0 3 5 0 0 0 8 0 0 0 1 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 2 0 0
..............................................................................TTTGGAATGACCGAAGGTGTGG.................................................... 22 0 3 5.67 17 2 1 0 0 5 0 0 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 2 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTGGCAT................................................. 26 0 3 4.67 14 1 3 2 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 2 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTG....................................................... 20 0 3 3.67 11 3 0 0 0 1 0 2 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGT........................................................ 19 0 3 3.33 10 0 2 0 1 1 0 0 0 0 0 0 0 1 0 2 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................TTTGGAATGACCGAAGGTGTGGCA.................................................. 24 0 3 2.67 8 0 0 0 0 3 1 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................TTTGGAATGACCGAAGGTGT...................................................... 20 0 3 2.33 7 0 0 0 0 0 0 0 0 2 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
TTCACTCGTGCAAAGCAGAGAACC................................................................................................................................ 24 0 5 2.20 11 1 0 1 0 0 1 0 0 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTGGCATC................................................ 27 0 2 2.00 4 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................TTGGAATGACCGAAGGTGT...................................................... 19 0 3 2.00 6 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................ACATTGTAGAACGCTCCACTGAGAC................... 25 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
............................................................................TTTTTGGAATGACCGAAGGTGTG..................................................... 23 0 3 2.00 6 0 0 0 0 0 0 1 0 0 1 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTGGAATGACCGAAGGTGTGGCAT................................................. 25 0 3 2.00 6 1 1 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGAACCAGTCA........................................................................................................................... 29 0 5 1.80 9 2 0 2 0 0 3 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TTGGAATGACCGAAGGTGTGG.................................................... 21 0 3 1.67 5 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TTGGAATGACCGAAGGTGTG..................................................... 20 0 3 1.67 5 0 0 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTGGCC.................................................. 25 1 3 1.33 4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGAAC................................................................................................................................. 23 0 6 1.33 8 0 1 3 0 0 0 0 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGAACCA............................................................................................................................... 25 0 5 1.20 6 2 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTGGAATGACCGAAGGTG....................................................... 19 0 3 1.00 3 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTC..................................................... 22 1 3 1.00 3 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTTTTGGAATGACCGAAGGTGTGGC................................................... 25 0 3 1.00 3 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................CATTTTTTTGGAATGACCGAAGGTGTG..................................................... 27 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................TTGCCACAAATTGGGTCCTGGAGACA................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTAGACATTGTAGAACGCTCCACTGA...................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GTAGAACGCTCCACTGAGACTCTGTA............. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTAGAATGACCGAAGGTGTGGC................................................... 23 1 3 0.67 2 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTGGAATGACCGAAGGTGTGGCC.................................................. 24 1 3 0.67 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TTGGAATGACCGAAGGTG....................................................... 18 0 3 0.67 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................TTTTTGGAATGACCGAAGGTGT...................................................... 22 0 3 0.67 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGGC..................................................... 22 2 3 0.67 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TGTTGGAATGACCGAAGGTGTGGC................................................... 24 1 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................................TTGGAATGACCGAAGGTGTGGCAT................................................. 24 0 3 0.67 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TTGGAATGACCGAAGGTGTC..................................................... 20 1 3 0.67 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAAAGAACCAG.............................................................................................................................. 26 1 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGA................................................................................................................................... 21 0 6 0.50 3 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTGGAATGACCGAAGGTGTGGCATC................................................ 26 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TTGGAATGACCGAAGGTGTGGCATC................................................ 25 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TTGGAATGACCGAAGGTGTGGCATCTT.............................................. 27 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTGGAATGACCGAAGGTGTGGCATCT............................................... 27 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CCGAAGGTGTGGCATCTTAGACAT........................................ 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAG.................................................................................................................................... 20 0 6 0.50 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGCGAACCAGTC............................................................................................................................ 28 1 5 0.40 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TGAGACTCTGTATCTGCC....... 18 0 5 0.40 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................TTTTTGGAATGACCGAAGGTGTGG.................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTTG.................................................... 23 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGGCCGAAGGTGTGGC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGCGGC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................TTTGGAATGACCGAAGGTGTGGT................................................... 23 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TTGGAATGACCGAAGGTGTGGCA.................................................. 23 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAGTGACCGAAGGTGTG..................................................... 22 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATAACCGAAGGTGTG..................................................... 22 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTTTTGGAATGACCGAAGGTG....................................................... 21 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................TTTTGGAATTACCGAAGGTGTGT.................................................... 23 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTCGGAATGACCGAAGGTGTGGC................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTGGAATGACCGAAGGGGTGGC................................................... 23 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTTTTGGAATGACCGAAGGT........................................................ 20 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTCGGAATGACCGAAGGTGTG..................................................... 22 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTGGG................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTGCC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................GAATGACCGAAGGTGTGGC................................................... 19 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGACTGACCGAAGGTGTGGC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................CTTTGGAATGACCGAAGGTGTG..................................................... 22 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGAGCGAAGGTGTGGC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACAGAAGGTGTGGC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTGT.................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................ATTTGGAATGACCGAAGGTGTGGC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGAA.................................................................................................................................. 22 0 6 0.33 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGTAGGTGT...................................................... 21 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTTTGGC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................TGGAATGACCGAAGGTGTGGCA.................................................. 22 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGAGTGGC................................................... 24 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGTCCGAAGGTGTGGC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................TTGAATGACCGAAGGTGTGGC................................................... 21 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TGTTGGAATGACCGAAGGTGTGG.................................................... 23 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGACGGTGTGGC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTGGAATGACCAAAGGTGTGGC................................................... 23 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGGAGGTG....................................................... 20 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TCTTGGAATGACCGAAGGTGTGGC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTTGC................................................... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGTGTGGAATGACCGAAGGTGTGGA................................................... 25 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TTGGAATGACCGAAGGTGCGGC................................................... 22 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TCTTGGAATGACCGAAGGTGT...................................................... 21 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGAAGGTGTGGA................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGGAATGACCGGAGGTGTGGC................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGA..................................................................................................................................... 19 0 7 0.29 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................AAGAACCAGTCATATGAAAGCCAGC.............................................................................................................. 25 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTTACTCGTGCAAAGCAGAGAACCAGTC............................................................................................................................ 28 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TCACTCGTGCAAAGCAGAGAACCAGT............................................................................................................................. 26 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TACACTCGTGCAAAGCAGAGAACCAG.............................................................................................................................. 26 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCCACTGAGACTCTGTATCTGCCC...... 24 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GCAAAGCAGAGAACCAGTCATATGAGA.................................................................................................................... 27 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........TGCAAAGCAGAGAACCAGTCA........................................................................................................................... 21 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCCACTGAGACTCTGTATCTGCCGAGT... 27 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..CACTCGTGCAAAGCAGAGAACCAGTCA........................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TGCAAAGCAGAGAACCAGT............................................................................................................................. 19 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TGCACTCGTGCAAAGCAGAGAACCAG.............................................................................................................................. 26 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAATCAGAGAACCAGTC............................................................................................................................ 28 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAAAGAACCAGTCA........................................................................................................................... 29 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTTACTCGTGCAAAGCAGAGAACCAG.............................................................................................................................. 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTGGAATGACCGACGCTGTGGC................................................... 23 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCGAAGCAGAGAACCAGT............................................................................................................................. 27 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGAACCCTT............................................................................................................................. 27 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCCAAGCAGAGAACCAGTC............................................................................................................................ 28 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CCACTGAGACTCTGTATCTGCC....... 22 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGAAAAGCAGAGAACCAG.............................................................................................................................. 26 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCTGAGAACCAGT............................................................................................................................. 27 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAAAGAACCAGTC............................................................................................................................ 28 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGAACCAGCC............................................................................................................................ 28 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGAACCGG.............................................................................................................................. 26 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGCGGAAAGCAGAGAACCAGTC............................................................................................................................ 28 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TGCAAAGCAGAGAACCAGTC............................................................................................................................ 20 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TAAGACTCTGTATCTGCC....... 18 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................TCCACTGAGACTCTGTATCTGCC....... 23 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCGGAGAACCAG.............................................................................................................................. 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TCCACTCGTGCAAAGCAGAGAACCAG.............................................................................................................................. 26 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAAAGAACCAGT............................................................................................................................. 27 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...ACTCGTGCAAAGCAGAGAACCAGTC............................................................................................................................ 25 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGACAACCAG.............................................................................................................................. 26 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCACTCGTGCAAAGCAGAGAACTG............................................................................................................................... 25 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTTGTAATGACCGAAGCTGGGGC................................................... 24 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GAGACCCAGCTAACTTGCC..................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................TGAGACATTGTTGAAAGCTCC........................... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
................................................................................................GTGGCATCAGAGACATTCT..................................... 19 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AAGTGAGCACGTTTCGTCTCTTGGTCAGTATACTCTCGGTCGAGTAAACGGTGTTTAACCCAGGACCTCTGTTAGAAAAAACCTTACTGGCTTCCACACCGTAGAATCTGTAACATCTTGCGAGGTGACTCTGAGACATAGACGGCTCAACA
***********************************......((....(((((((..((.(((((((((((......)))))))...)))).))..)))))))....)).........*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060676
9xArg_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060679
140x9_testes_total
 SRR060656
9x160_ovaries_total
 SRR060688
160_ovaries_total
 SRR060678
9x140_testes_total
 M047
female body
 SRR060681
Argx9_testes_total
 SRR060683
160_testes_total
 SRR060657
140_testes_total
 SRR060675
140x9_ovaries_total
 SRR060670
9_testes_total
 SRR060680
 9xArg_testes_total
 SRR060660
Argentina_ovaries_total
...............................................................GACCTCTGTTAGAAAAAACCTTAC................................................................. 24 0 1 4.00 4 1 2 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................CCAGGACCTCTGTTAGAAAAAACCTTA.................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CAGGACCTCTGTTAGAAAAAACCTTACT................................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................CCTGTTAGAAAAAACCTTACTGGCTT........................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................ACCTCTGTTAGAAAAAACCTTAC................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GGACCTCTGTTAGAAAAAACCTTAC................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGTCTCTTGGTCAGTATACTCT.................................................................................................................... 22 0 5 0.60 3 0 0 0 0 0 0 2 0 0 0 1 0 0 0
.......................................................................................................................GCGAGGTGACTCTGAGACATAGACG........ 25 0 5 0.60 3 0 0 0 0 0 2 0 0 1 0 0 0 0 0
.................CTCTTGGTCAGTATACGCTCGGTCG.............................................................................................................. 25 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................CTCTGAGACATAGACGGCTCA... 21 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................GCGAGGTGACTCTGAGACATAGACT........ 25 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................GCGAGGTGACTCTGAGACATAGACGGCT..... 28 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGCGAGGTGACTCTGAGACATAGACGGCT..... 29 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............TTCGTCTCTTGGTCAGTATAC....................................................................................................................... 21 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TCTGAGACATAGACGGCTC.... 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......CCACGTTTCGTCTCTTGGTCAGTATACT...................................................................................................................... 28 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...TGAGCACGTTTCGTCTCTTGGTCAGT........................................................................................................................... 26 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.AGTGAGCACGTTTCGTCTCTTGGTC.............................................................................................................................. 25 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............GTTCTCTTGGTCAGTATACTCT.................................................................................................................... 22 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................TGCGAGGTGACTCTGAGACATAGACG........ 26 0 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................TGCGAGGTGACTCTGAGACAT............. 21 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................GCGAGGTGACTCTGAGACAT............. 20 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................ACTCTTGGTCGGTATCCTC..................................................................................................................... 19 3 19 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................AGAAAAAGCCTTCCCGGCT............................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13324:1051764-1051915 + dvi_151 TTCACTCGT---------GCAAAGCAGAGAACCAGTCATATGAGAGCCAGCTCATTTGCCACAAATTGGGTCCTGGAGACAATCTTTTTTGGAATGACCGAAGGTGTGGCATCTTAGACATTGTAGA--------------------ACGCTCCACTGAGACTCTGTATCTGCCGAGTTGT
droMoj3 scaffold_6540:311508-311683 + TTAGCCTGA-----GATCACACGAATCTCACCCTGTGTGATGATTGCCTGAGCATTTTCCACAGATTGGTTTTTTCAGGCAATAATTTCGGGTATGGCCAAAGTCTTAGCATCTGAAGCATTGCACCAAATCTTTGCTAAACTTTGCTTTAGTAACTGACACCCTGTGCCTTCCAATTTGC
droWil2 scf2_1100000003657:3192-3372 - GTCACCATCTTTGAGGCCGCATAAATGGGACCCAGTTAGGTGATTGCCTGAGCATATGCCACAAACAGCCTTTACATAACAGTTGTTTTTCGTATGACCGAAATCTTGACATTTAAGGCATTGGACAAGATCTCTATTGCGCTTCGCCTTTAGCACTGTTACTCTATGCCTTCCAATTTGA
dp5 Unknown_singleton_3490:8062-8242 - GTTACTAGGACTTAGTTCGCATGATTTTGATCCAGTATAGTGGTCGCCAGAGCATTTTCCACAGACTGTCTTTTTAAGGCAGTAGTTTCGCGTATGTCCAAAATCTTGGCATCTAAAGCACTGCACCAATTCTTTACTGTGCTTTGCTTTAATTACTGTTACTCTGTGCCTTCCAATTTGA
droPer2 scaffold_55:372581-372761 + GTTACTAGGACTTAGTTCGCATGATTTTGATCCAGTATAGTGGTCGCCAGAGCATTTTCCACAGACTGTCTTTTTAAGGCAGTAGTTTCGCGTATGTCCAAAATCTTGGCATCTAAAGCACTGCACCAATTCTTTACTGTGCTTTGCTTTAATTACTGTTACTCTGTGCCTTCCAATTTGA
droAna3 scaffold_12902:160739-160910 + ATCGCTTAC---------ACAAAGTAAAGATCCAGTAGCATGAGGGCCACTACATTTACCACAAATAGGGTCCAGGACACAATAGTTTTTAGAGTGCCCAAAAATTTGGCATCTTTGGCATTGAAGTAGATCCTTTCTACGAGAAGCACGCTCAACAGTGACTCTGTATCTACCAAGTTGA
droBip1 scf7180000395853:2743-2906 - GTCGCTCAC---------ACAGAGTAAGGAACCAGTTTCGTGAGGCCCATTACATTTACCACAAACTGCGTCCAGGACACAGTAGTTTTTCGAGTGCCCAAAAATTTGACATCTTTGACA--------ATTCCTTTCTGCGGAAAGCACGCTCGACAGTGACTCTATATCTCCCAAGATTT
droKik1 scf7180000302657:152789-152933 + GACACTAGT---------GCAT-----AAAGCAGATCATATGAGGACCACTACATTTACCACAAATAGGGTCCTGGACGCAATAGTTCTTAGAGTGTCCAAATAGTTGGCATTTTTGGCACTGTAGCAACTCTTTTCTACGAGCAGCATGCTCAACAGT----------------------
droFic1 scf7180000454031:20950-21107 + TTCGCTAGT---------GCAGAGCACACAGCCTGTAATATGAGGGCCACTACATTTACCACAGACAGGGTCCAGGACGCAGTAATTTCTCGAGTGCCCAAATATTTGGCA--------------ATAATTCTTTTCTACGAGTAGCACGTTCTATATTTACTCTGTGTCTGCCAATTTGG
droEle1 scf7180000490546:3372-3543 + GTCGCTTGT---------GCAGTGTGCTGAGCCGGTCATATGAGGACCACTACATTTACCACAAATAGGGGCCTGGAGACAGTAGTTCTTAGAGTGCCCAAAAATTTGGCATCTTTGACATTGTAATAGGTCTTTTCTACGGGAGGCACGTTCAACAGTGACTCTGTATCTGCCAAGTTGA
droRho1 scf7180000779474:208577-208748 - ATCGCTTAC---------ACAGAGTGTGGAACCAGTAACATGAGAACCACTACATTTACCACAAACAGGGTCCTGAACACAATAGTTTTTAGAATGTCCAAAAATTTGGCATCTTTGACATTGAAGTAATTCTTTTCTACGGGGTGCACGCTCGACAGTGACTCTGTATCTCCCGAGTTGC
droBia1 scf7180000301297:5093-5245 + ATCGCTTAC---------ACAGAGTACGGAACCAGTAACAAGAGGGCCACTACATTTACCACATACATGGTGCAGAACACAGAAGTTTTAAGAGTGCCCAAAAATTTGGCATCTTTGACATTGAAGTAATTCCTTTTTAGAGGACGCACGCTCGACAGT-------------------TTT
droTak1 scf7180000413742:1317-1488 - GTCGCTTGT---------GCAGTGTGCTGAGCCGGTCATATGAGGACCACTACATTTACCACAAATAGGGGCCTGGAGACAGTAGTTCTTAGAGTGCCCAAAAATTTGGCATCTTTGACATTGTAATAGGTCTTTTCTACGGGAGGCACGTTCAACAGTGACTCTGTATCTGCCAAGTTGA
droEug1 scf7180000409098:1791-1962 - ATCGCCTAC---------ACAGAGAATGGAACCAGTAACATGATACCCACCACATTTACCACAGACAGGGTCCAGGATACAGTAGTTTTTAGAGTGCCCAAACATTTGGCATCTTTGACATTGAAGTAATTCCTTTCTACGGGAAGCACGCTCGACAGTGACTCTATGTCTTCCAAGTTGT
dm3 chrU:1350991-1351135 + GTTACTCGT---------GCATAGCGTAGAGCCAGTTGTGTGGGGTCCAGCACACTTGCCACAGATTGGATCCTGGAGACAATAGTTTTTGGAGTGCCCAAAA---------------------------TGTTTCCTGCGCCGAGTGCGTTTTATGGTGACTCTGTGTCTACCAAATTGC
droSim2 2l:23386250-23386421 + GTCCCTCGT---------GCATAGCGTAGAGCCTGTTGCGTGGGGCCTAGCACACTTGCCACAGATTGGATCCTGGAGACAGTAGTTTTTGGAGTGCCCAAAAATGTGGCATCTCAGACATTGCAGCAATTCTTGCCTGCGACGAGCGCGTTCTATGGTGACTCTGTGTCTACCAAATTGC
droSec2 scaffold_2974:1398-1569 + GTCACTTAT---------GCACAAAGCAGACCCGGTCATATGGGGACCACTACATTTACCACAAATAGGATCCTGGGCGCAATAGTTCTTAGAGTGTCCAAAAATTTGGCATCTTTGACATTGTAGCAGTTCTTTTCTACGTGTAGCGCGCTCAACAGTGACTCTGTATCTGCCAAGTCGA
droYak3 v2_chrUn_2764:13018-13189 + ACCACTCGT---------GCACAGCATAGAACCAGTTGCGTGAGGGCCAGCGCACTTGCCACATATAGGGTCCTGGAGACAATAGTTTTTGGAGTGTCCAAAGATGTGGCATCCCATACATTGCAGCACTTCTTTTCTGCGACGAGCGCGTTCTATGGTGACTCTGTGTCTACCGAGTTGC
droEre2 scaffold_4929:24206656-24206827 - GTCACTCGT---------GCATAGCGTAGAGCCAGTTGCGTGGGGCCCAGCACACTTGCCACAGATTGGATCCTGGAGACAATAGTTTTTGGAGTGCCCAAAAATGTGGCATCTCAGACATTGGAGGACTTCTTTCCTGCGACGAGCACGTTCTATGGTGACTCTGTGTCTTCCAAGTTGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTCACTCGT---------GCAAAGCAGAGAACCAGTCATATGAGAGCCAGCTCATTTGCCACAAATTGGGTCCTGGAGACAATCTTTTTTGGAATGACCGAAGGTGTGGCATCTTAGACATTGTAGA--------------------ACGCTCCACTGAGACTCTGTATCTGCCGAGTTGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................TTTTGGAATGACCGAAGGTGTGGC.......................................................................24375.6722700921313116205151513000000100561120330412140416151200000000000000000003030
.......................................................................................TTTGGAATGACCGAAGGTGTGGC.......................................................................23335.671070020212222220111160000005000030247000000310100000000000000000000000
TTCACTCGT---------GCAAAGCAGAGAACCAG..................................................................................................................................................26533.6016800000160000030000000400611034293404620091450000000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTGTGG........................................................................23323.006900183261110001100000010011020131000411012600000000000000000000010
......................................................................................TTTTGGAATGACCGAAGGTGTG.........................................................................22322.3367002011050000011000000300130202001013000021000000000000000000000010
TTCACTCGT---------GCAAAGCAGAGAACCAGT.................................................................................................................................................27514.807400000060000020000000100930131470116003521000000000000000000000000
TTCACTCGT---------GCAAAGCAGAGAACCAGTC................................................................................................................................................28513.6068000000000000100000000001501210130116008550000000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTGT..........................................................................2139.3328000015000000010000004001001050100200000700000000000000000000000
.......................................................................................TTTGGAATGACCGAAGGTGTG.........................................................................2139.00270000021411010000000000001000012000300000100000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTGTGGCA......................................................................2538.00240014001000000210000000001002010000000000100000000000000000000010
........................................................................................TTGGAATGACCGAAGGTGTGGC.......................................................................2238.0024000000030280000000000000030115000000001000000000000000000000000
.......................................................................................TTTGGAATGACCGAAGGTGTGG........................................................................2235.6717001000005010000000002000030021000020000000000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTGTGGCAT.....................................................................2634.6714003020000002100000000000002010001100000100000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTG...........................................................................2033.6711000000001000000000000000100031000200000200000000000000000000010
......................................................................................TTTTGGAATGACCGAAGGT............................................................................1933.3310002001001010000000002000000000100000002000000000000000000000000
.......................................................................................TTTGGAATGACCGAAGGTGTGGCA......................................................................2432.678000000003000000000000000000100000010100200000000000000000000000
.......................................................................................TTTGGAATGACCGAAGGTGT..........................................................................2032.337000000200000000000002000000002000010000000000000000000000000000
TTCACTCGT---------GCAAAGCAGAGAACC....................................................................................................................................................2452.2011000000000000000000001004001110021000000000000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTGTGGCATC....................................................................2722.004003100000000000000000000000000000000000000000000000000000000000
........................................................................................TTGGAATGACCGAAGGTGT..........................................................................1932.006000000021000000000000000010001000000100000000000000000000000000
.....................................................................................................................ACATTGTAGA--------------------ACGCTCCACTGAGAC...................2512.002200000000000000000000000000000000000000000000000000000000000000
.....................................................................................TTTTTGGAATGACCGAAGGTGTG.........................................................................2332.006000000100000000000002001000000000100000100000000000000000000000
.......................................................................................TTTGGAATGACCGAAGGTGTGGCAT.....................................................................2532.006001000000000000000000000010211000000000000000000000000000000000
TTCACTCGT---------GCAAAGCAGAGAACCAGTCA...............................................................................................................................................2951.809000000100000000000000000002320000000100000000000000000000000000
........................................................................................TTGGAATGACCGAAGGTGTGG........................................................................2131.675000000000000000000000000001003000000000100000000000000000000000
........................................................................................TTGGAATGACCGAAGGTGTG.........................................................................2031.675000001000000000000000000100102000000000000000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTGTGGCC......................................................................2531.334002010000000000000000000000000000000000000000000000000000000010
TTCACTCGT---------GCAAAGCAGAGAAC.....................................................................................................................................................2361.338001000100000000000000002103000000000000000000000000000000000000
TTCACTCGT---------GCAAAGCAGAGAACCA...................................................................................................................................................2551.206000000000000000000000000000320000000100000000000000000000000000
.......................................................................................TTTGGAATGACCGAAGGTG...........................................................................1931.003000000002000000000000000000100000000000000000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTGTC.........................................................................2231.003000010000000000000000001000000000000000100000000000000000000000
.....................................................................................TTTTTGGAATGACCGAAGGTGTGGC.......................................................................2531.003000001010000000000000000010000000000000000000000000000000000000
.......................................................TTGCCACAAATTGGGTCCTGGAGACA....................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................TTAGACATTGTAGA--------------------ACGCTCCACTGA......................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GTAGA--------------------ACGCTCCACTGAGACTCTGTA.............2611.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................TTTGGAATGACCGAAGGTGTGGCC......................................................................2430.672001000000000000000000000000001000000000000000000000000000000000
........................................................................................TTGGAATGACCGAAGGTG...........................................................................1830.672000000000000000000000000000001000010000000000000000000000000000
.....................................................................................TTTTTGGAATGACCGAAGGTGT..........................................................................2230.672000000100000000000001000000000000000000000000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTGGC.........................................................................2230.672000000000000000000000000000000000200000000000000000000000000000
........................................................................................TTGGAATGACCGAAGGTGTGGCAT.....................................................................2430.672000000000000000000000000000200000000000000000000000000000000000
........................................................................................TTGGAATGACCGAAGGTGTC.........................................................................2030.672000000000000000000000000000002000000000000000000000000000000000
TTCACTCGT---------GCAAAGCAGAGA.......................................................................................................................................................2160.503000000100000000000001001000000000000000000000000000000000000000
.......................................................................................TTTGGAATGACCGAAGGTGTGGCATC....................................................................2620.501000000000000000000000000000100000000000000000000000000000000000
........................................................................................TTGGAATGACCGAAGGTGTGGCATC....................................................................2520.501000000000000000000000000000001000000000000000000000000000000000
........................................................................................TTGGAATGACCGAAGGTGTGGCATCTT..................................................................2720.501000000000000000000000000010000000000000000000000000000000000000
.......................................................................................TTTGGAATGACCGAAGGTGTGGCATCT...................................................................2720.501000000000000000000000000000001000000000000000000000000000000000
.................................................................................................CCGAAGGTGTGGCATCTTAGACAT............................................................2420.501001000000000000000000000000000000000000000000000000000000000000
TTCACTCGT---------GCAAAGCAGAG........................................................................................................................................................2060.503000000000000000000000000000010000002000000000000000000000000000
............................................................................................................................................................TGAGACTCTGTATCTGCC.......1850.402100000000000000000000000000010000000000000000000000000000000000
.....................................................................................TTTTTGGAATGACCGAAGGTGTGG........................................................................2430.331000000000000000000000000000010000000000000000000000000000000000
.......................................................................................TTTGGAATGACCGAAGGTGTGGT.......................................................................2330.331000000000010000000000000000000000000000000000000000000000000000
........................................................................................TTGGAATGACCGAAGGTGTGGCA......................................................................2330.331000000000000000000000000000001000000000000000000000000000000000
.....................................................................................TTTTTGGAATGACCGAAGGTG...........................................................................2130.331000000000000000000000000000000010000000000000000000000000000000
.....................................................................................TTTTTGGAATGACCGAAGGT............................................................................2030.331000000000000000000000001000000000000000000000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTGTGGG.......................................................................2430.331000000000000000000000000000000000000000000000000000000000001000
...........................................................................................GAATGACCGAAGGTGTGGC.......................................................................1930.331000000000000000000000000000001000000000000000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTGTGT........................................................................2330.331000000000000000000000000000010000000000000000000000000000000000
TTCACTCGT---------GCAAAGCAGAGAA......................................................................................................................................................2260.332000000100000000000000000000000000000010000000000000000000000000
.........................................................................................TGGAATGACCGAAGGTGTGGCA......................................................................2230.331001000000000000000000000000000000000000000000000000000000000000
......................................................................................TTTTGGAATGACCGAAGGTGTGGA.......................................................................2430.331000000000000100000000000000000000000000000000000000000000000000
TTCACTCGT---------GCAAAGCAGA.........................................................................................................................................................1970.292000000000000000000000002000000000000000000000000000000000000000
.TCACTCGT---------GCAAAGCAGAGAACCAGT.................................................................................................................................................2650.201000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................TCCACTGAGACTCTGTATCTGCCC......2450.201000000000000000000000000100000000000000000000000000000000000000
..................GCAAAGCAGAGAACCAGTCATATGAGA........................................................................................................................................2750.201000000000000000000000000000000000000010000000000000000000000000
........T---------GCAAAGCAGAGAACCAGTCA...............................................................................................................................................2150.201000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................TCCACTGAGACTCTGTATCTGCCGAGT...2750.201000000010000000000000000000000000000000000000000000000000000000
..CACTCGT---------GCAAAGCAGAGAACCAGTCA...............................................................................................................................................2750.201000000000000000000000000000010000000000000000000000000000000000
........T---------GCAAAGCAGAGAACCAGT.................................................................................................................................................1950.201000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................CCACTGAGACTCTGTATCTGCC.......2250.201000000000000000000000000000000000000001000000000000000000000000
........T---------GCAAAGCAGAGAACCAGTC................................................................................................................................................2050.201000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................TCCACTGAGACTCTGTATCTGCC.......2350.201000000010000000000000000000000000000000000000000000000000000000
...ACTCGT---------GCAAAGCAGAGAACCAGTC................................................................................................................................................2550.201000000000000000000000000000100000000000000000000000000000000000
TTCACTCGT---------GCAAAGCAGAGAACTG...................................................................................................................................................2560.171000000000000000000000000001000000000000000000000000000000000000
droMoj3
TTAGCCTGA-----GATCACACGAATCTCACCCTGTGTGATGATTGCCTGAGCATTTTCCACAGATTGGTTTTTTCAGGCAATAATTTCGGGTATGGCCAAAGTCTTAGCATCTGAAGCATTGCACCAAATCTTTGCTAAACTTTGCTTTAGTAACTGACACCCTGTGCCTTCCAATTTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................TAATTTCGGGTATGGCCAAAGTCT...........................................................................24221.004231100100
......................................................................................................................................TGCTAAACTTTGCTTTAGTAACTGACACC..................2929.50197000120
......................................................................................................................................TGCTAAACTTTGCTTTAGTAACTG.......................2426.50131200010
......................................................................................................................................TGCTAAACTTTGCTTTAGTAACTGAC.....................2624.008500030
.........................................................................................................................................TAAACTTTGCTTTAGTAACTGACACC..................2622.505200030
..................................................................................TAATTTCGGGTATGGCCAAAGTC............................................................................2322.004200011
...................................................................................AATTTCGGGTATGGCCAAAGTCT...........................................................................2322.004400000
..................................................................................TAATTTCGGGTATGGCCAAAGTCTT..........................................................................2521.503300000
.........................................................................................................................................TAAACTTTGCTTTAGTAACTGACACCC.................2721.503200010
......................................................................................................................................TGCTAAACTTTGCTTTAGTAACTGA......................2521.503300000
...............................................................................................................................................TTGCTTTAGTAACTGACACCCTGTGCC...........2721.503100020
..................................................................................TAATTTCGGGTATGGCCAAAGTCTC..........................................................................2521.002200000
................................................................................................................................................TGCTTTAGTAACTGACACCCTGTGCC...........2621.002200000
TTAGCCTGA-----GATCACACGAATC..........................................................................................................................................................2221.002200000
......................................................................................................................................TGCTAAACTTTGCTTTAGTAACTGACA....................2721.002200000
.......................................................................................TCGGGTATGGCCAAAGTCTTAGCATC....................................................................2611.001000010
.....................................................................TTTTTTCAGGCAATAATTTCGGGTAT......................................................................................2621.002200000
............................................................................................................................................ACTTTGCTTTAGTAACTGACACC..................2321.002000020
......................................................................................................................................TGCTAAACTTTGCTTTAGTAACTGACAC...................2821.002200000
..................................................................................TAATTTCGGGTATGGCCAAAGTCC...........................................................................2421.002000020
..............................................................................GCAATAATTTCGGGTATGGC...................................................................................2020.501000010
..........................................................................TCAGGCAATAATTTCGGGTATGGCCA.................................................................................2620.501100000
................................................................................AATAATTTCGGGTATGGC...................................................................................1820.501000010
..AGCCTGA-----GATCACACGAATC..........................................................................................................................................................2020.501000010
.......................................................................................TCGGGTATGGCCAAAGTCTT..........................................................................2020.501100000
.........................................................................TTCAGGCAATAATTTCGGGTATGGC...................................................................................2520.501010000
...........................................................................................................................................AACTTTGCTTTAGTAACTGACACCC.................2520.501100000
......................................................................................................................................TGCTAAACTTTGCTTTAGTA...........................2020.501100000
..................................................................TGGTTTTTTCAGGCAATAATTTCGGG.........................................................................................2620.501100000
.............................................................................................................................................CTTTGCTTTAGTAACTGACACC..................2220.501000010
.................................................................................................................................................GCTTTAGTAACTGACACCCTGTGCC...........2520.501000010
......................................................................................................................................TGCTAAACTTTGCTTTAGTAACTGACACT..................2920.501000010
...........................................................................CAGGCAATAATTTCGGGTATGGC...................................................................................2320.501000010
TTAGCCTGA-----GATCACACGAATCT.........................................................................................................................................................2320.501000010
...........................................................................CAGGCAATAATTTCGGGTATGGCCAAA...............................................................................2720.501000010
.......................................................................................................................................GCTAAACTTTGCTTTAGTAACTGACACC..................2820.501000010
............................................................................................................................................ACTTTGCTTTAGTAACTGA......................1920.501000010
..................................................................................TAATTTCGGGTATGGCCAAAGTCA...........................................................................2420.501000010
.......................................................................................................................................GCTAAACTTTGCTTTAGTAACTGACA....................2620.501100000
.....................................................................TTTTTTCAGGCAATAATTTCGGGTA.......................................................................................2520.501100000
..........................................................................................................................................AAACTTTGCTTTAGTAACTGACACC..................2520.501100000
..............................................................................................................................................TTTGCTTTAGTAACTGACACCCTGTGCC...........2820.501000010
......................................................................................................................................TGCTAAACTTTGCTTTAGTAACTGACC....................2720.501100000
......................................................................................................................................TGCTAAACTTTGCTTTAG.............................1820.501000010
..................................................................................TAATTTCGGGTATGGCCAAAGT.............................................................................2220.501100000
.........................................................................................................................TGCACCAAATCTTTGCTAAACTTTGCT.................................2720.501100000
...............................................................................................................TCTGAAGCATTGCACCAAATCTT...............................................2350.402100010
..........................................................................................................................................................ACTGACACCCTGTGCCTTCC.......2030.331100000
................................................................................................................CTGAAGCATTGCACCAAATCTT...............................................2250.201100000
................................................................................................................CTGAAGCATTGCACCAAATCTTTT.............................................2450.201100000
droWil2
GTCACCATCTTTGAGGCCGCATAAATGGGACCCAGTTAGGTGATTGCCTGAGCATATGCCACAAACAGCCTTTACATAACAGTTGTTTTTCGTATGACCGAAATCTTGACATTTAAGGCATTGGACAAGATCTCTATTGCGCTTCGCCTTTAGCACTGTTACTCTATGCCTTCCAATTTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................TAAATGGGACCCAGTTAGGTGATTG.......................................................................................................................................25220.5041000410
.....................TAAATGGGACCCAGTTAGGTGATTGC......................................................................................................................................26220.0040020380
........................................................................TACATAACAGTTGTTTTTCGTATGACCG.................................................................................28217.5035010340
..........................................................................................................TGACATTTAAGGCATTGGACAAGATC.................................................26111.001102090
.................CGCATAAATGGGACCCAGTTAGGTGA..........................................................................................................................................2626.5013000130
........................................................................TACATAACAGTTGTTTTTCGTATGACC..................................................................................2726.0012020100
.......................................................................TTACATAACAGTTGTTTTTCGTA.......................................................................................2325.0010000100
............................................................................TAACAGTTGTTTTTCGTATGACCGAAA..............................................................................2724.50900090
......................AAATGGGACCCAGTTAGGTGATTGC......................................................................................................................................2524.00801070
.......................................................................TTACATAACAGTTGTTTTTCGTATGACC..................................................................................2823.00600060
............................................TGCCTGAGCATATGCCACAAACAGCCT..............................................................................................................2723.00600060
......................................................................................................................................TATTGCGCTTCGCCTTTAGCACTGT......................2532.33704030
..........................................................................................................TGACATTTAAGGCATTGGACAAGATCTC...............................................2812.00201010
.........................................................................................................................................TGCGCTTCGCCTTTAGCACTGTTACTC.................2732.00606000
..........................................................................................................TGACATTTAAGGCATTGGACAAGATCT................................................2712.00200020
.........................................................................................................TTGACATTTAAGGCATTGGACAAGAT..................................................2612.00201010
......................AAATGGGACCCAGTTAGGTGATTG.......................................................................................................................................2421.50300030
.........................TGGGACCCAGTTAGGTGATTGCCTG...................................................................................................................................2521.50300030
........................................................................TACATAACAGTTGTTTTTCGTATGA....................................................................................2521.50301020
.....................TAAATGGGACCCAGTTAGGTGA..........................................................................................................................................2221.50300030
...............................................................................................................................................TCGCCTTTAGCACTGTTACTCTATGCCT..........2831.33404000
................................................................................................................TTAAGGCATTGGACAAGATCTCTAT............................................2511.00101000
.................CGCATAAATGGGACCCAGTTAGGTGAT.........................................................................................................................................2721.00200020
......................AAATGGGACCCAGTTAGGTGATTGCC.....................................................................................................................................2621.00200020
.........................................................................................................TTGACATTTAAGGCATTGGACAAGA...................................................2511.00100010
............................................TGCCTGAGCATATGCCACAAACAG.................................................................................................................2421.00200020
...............................................................................................................TTTAAGGCATTGGACAAGATCTCTAT............................................2611.00100010
............................................TGCCTGAGCATATGCCACAAACAGCCTT.............................................................................................................2821.00200020
.....................TAAATGGGACCCAGTTAGGTGATTGCT.....................................................................................................................................2721.00200020
.........................TGGGACCCAGTTAGGTGATTGCCTGAG.................................................................................................................................2721.00200020
..........................................................................................................TGACATTTAAGGCATTGGACAAGA...................................................2411.00101000
.......................................................................................................TCTTGACATTTAAGGCATTGGACAAGA...................................................2711.00101000
......................................................................TTTACATAACAGTTGTTTTTCGTA.......................................................................................2421.00200020
.....CATCTTTGAGGCCGCATAAATGGGAC......................................................................................................................................................2621.00200020
..................GCATAAATGGGACCCAGTTAGGTGA..........................................................................................................................................2521.00200020
.....................TAAATGGGACCCAGTTAGGTGATTGCCT....................................................................................................................................2821.00200020
................................................TGAGCATATGCCACAAACAGCCT..............................................................................................................2321.00200020
.............................................................................................................CATTTAAGGCATTGGACAAGATCTCT..............................................2611.00100010
.................................................................................................................TAAGGCATTGGACAAGATCTCTATTG..........................................2611.00100010
.......................................................................TTACATAACAGTTGTTTTTCGTATGAC...................................................................................2721.00220000
..........................................................................................................TGACATTTAAGGCATTGGACAAGAT..................................................2511.00100010
.....................TAAATGGGACCCAGTTAGGTGATT........................................................................................................................................2421.00200020
.......................AATGGGACCCAGTTAGGTGATTGCC.....................................................................................................................................2521.00200020
........................................................................TACATAACAGTTGTTTTTCGTA.......................................................................................2221.00200020
............................................TGCCTGAGCATATGCCACAAACAGC................................................................................................................2521.00200020
.................................................................................................................TAAGGCATTGGACAAGATCTCTATTGC.........................................2711.00100010
........................................TGATTGCCTGAGCATATGCCACAAAC...................................................................................................................2621.00200020
..............................................................................................................................................TTCGCCTTTAGCACTGTTACTCTATGCCT..........2930.67211000
.....................TAAATGGGACCCAGTTAGGTGATTGAA.....................................................................................................................................2720.50100010
................................................................................AGTTGTTTTTCGTATGACCGAAA..............................................................................2320.50100010
................................................TGAGCATATGCCACAAACAGCCTTTAC..........................................................................................................2720.50100010
.....................TAAATGGGACCCAGTTAGGTG...........................................................................................................................................2120.50100010
.........................................GATTGCCTGAGCATATGCCACAAACA..................................................................................................................2620.50100010
.........................................................................................................................TGGACAAGATCTCTATTGCGCTTCGCC.................................2720.50101000
..........................................................CCACAAACAGCCTTTACATAACAGT..................................................................................................2520.50100010
........................ATGGGACCCAGTTAGGTGATTG.......................................................................................................................................2220.50100010
.....................................AGGTGATTGCCTGAGCATATGCCACA......................................................................................................................2620.50101000
................................CAGTTAGGTGATTGCCTGAGCATA.............................................................................................................................2420.50100010
......................AAATGGGACCCAGTTAGGTGATTGA......................................................................................................................................2520.50100010
.........................TGGGACCCAGTTAGGTGATTGCCT....................................................................................................................................2420.50100010
................................................TGAGCATATGCCACAAACAGCCTTTACA.........................................................................................................2820.50100010
.....................TAAATGGGACCCAGTTAGGTGATTGCTA....................................................................................................................................2820.50100010
.......................................................................TTACATAACAGTTGTTTTTCGTATGA....................................................................................2620.50100010
......................AAATGGGACCCAGTTAGGTGATTGCA.....................................................................................................................................2620.50100010
........................................TGATTGCCTGAGCATATGCCACAAACA..................................................................................................................2720.50100010
.......TCTTTGAGGCCGCATAAATGGGAC......................................................................................................................................................2420.50100010
.TCACCATCTTTGAGGCCGCATAAATG..........................................................................................................................................................2620.50100010
......................................................................................................................CATTGGACAAGATCTCTATTGCGCT......................................2520.50101000
....................................TAGGTGATTGCCTGAGCATATGC..........................................................................................................................2320.50100010
............................................................................TAACAGTTGTTTTTCGTATGACCGA................................................................................2520.50100010
.......................................................................TTACATAACAGTTGTTTTTCGTATG.....................................................................................2520.50100010
................................................TGAGCATATGCCACAAACAGCCTTTA...........................................................................................................2620.50100010
............................................................................TAACAGTTGTTTTTCGTATGACCG.................................................................................2420.50100010
.........................................GATTGCCTGAGCATATGCCAC.......................................................................................................................2120.50100010
....................................TAGGTGATTGCCTGAGCATATGCCACA......................................................................................................................2720.50100010
.................CGCATAAATGGGACCCAGTTAGGTGAA.........................................................................................................................................2720.50100010
....................................TAGGTGATTGCCTGAGCATATGCCA........................................................................................................................2520.50101000
.......TCTTTGAGGCCGCATAAATGGGACCCA...................................................................................................................................................2720.50101000
.....................TAAATGGGACCCAGTTAGGTGATTGTA.....................................................................................................................................2720.50100010
.....................TAAATGGGACCCAGTTAGGTGAT.........................................................................................................................................2320.50100010
.....................TAAATGGGACCCAGTTAGGTGATA........................................................................................................................................2420.50100010
.............................................................................AACAGTTGTTTTTCGTATGACCGA................................................................................2420.50101000
.............................ACCCAGTTAGGTGATTGCCTGAGCATA.............................................................................................................................2720.50100100
.....................TAAATGGGACCCAGTTAGGTGATTGTT.....................................................................................................................................2720.50100010
.............................................................................AACAGTTGTTTTTCGTATGACCGAAA..............................................................................2620.50100010
.TCACCATCTTTGAGGCCGCA................................................................................................................................................................2020.50100010
..............................................................................................................................AAGATCTCTATTGCGCTTCGC..................................2120.50101000
........................................................................................TTCGTATGACCGAAATCTTGACATT....................................................................2520.50101000
.....................TAAATGGGACCCAGTTAGGTGAA.........................................................................................................................................2320.50100010
.........................................................................................................................................TGCGCTTCGCCTTTAGCACTGTTACTCT................2830.33100010
......................................................................................................................................TATTGCGCTTCGCCTTTAGCACT........................2330.33100010
......................................................................................................................................TATTGCGCTTCGCCTTTAGCACTGTTA....................2730.33100010
......................................................................................................................................................TAGCACTGTTACTCTATGCCTTCCAATT...2830.33101000
......................................................................................................................................................TAGCACTGTTACTCTATGCCT..........2130.33110000
....................................................................................................................................TCTATTGCGCTTCGCCTTTAGCACT........................2530.33101000
.......................................................................................................................................ATTGCGCTTCGCCTTTAGCACTG.......................2330.33101000
..................................................................................................................................TCTCTATTGCGCTTCGCCTTTAGCAC.........................2630.33101000
............................................................................................................................................................TGTTACTCTATGCCTTCCAATTTGA2530.33101000
.....................................................................................................................................................TTAGCACTGTTACTCTATGCCTTCCAATT...2930.33101000
.........................................................................................................................................TGCGCTTCGCCTTTAGCACTGTTAC...................2530.33100010
.................CGCATAAATGGGACCCAGTTAGG.............................................................................................................................................2330.33100010
................................................................................................................................................CGCCTTTAGCACTGTTACTCTATGCCTT.........2830.33101000
.........................................................................................................................................TGCGCTTCGCCTTTAGCACTGTTACT..................2630.33101000
....................ATAAATGGGACCCAGTTAGG.............................................................................................................................................2030.33100010
....................................................................................................................................TCTATTGCGCTTCGCCTTTAGCACTGT......................2730.33101000
................................................................................................................................................CGCCTTTAGCACTGTTACTCTATGCCT..........2730.33110000
..............................................................................................................................................TTCGCCTTTAGCACTGTTACTCTATGCC...........2830.33101000
dp5
GTTACTAGGACTTAGTTCGCATGATTTTGATCCAGTATAGTGGTCGCCAGAGCATTTTCCACAGACTGTCTTTTTAAGGCAGTAGTTTCGCGTATGTCCAAAATCTTGGCATCTAAAGCACTGCACCAATTCTTTACTGTGCTTTGCTTTAATTACTGTTACTCTGTGCCTTCCAATTTGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................TACTGTGCTTTGCTTTAATTACTGT......................2513.0030300000000
.................................................................................................................TAAAGCACTGCACCAATTCTTTACTG..........................................2632.6780620000000
.................................................................................................................................TTCTTTACTGTGCTTTGCTTTAATTAC.........................2711.0010100000000
.........................................................................................GCGTATGTCCAAAATCTTGGCATCTA..................................................................2611.0010100000000
...........................................TCGCCAGAGCATTTTCCACAGACTG.................................................................................................................2511.0011000000000
..................................................................................................................AAAGCACTGCACCAATTCTTTACTG..........................................2530.6720200000000
...............................................................................................................TCTAAAGCACTGCACCAATTCTTTACTG..........................................2830.6720200000000
.................................................................................................................TAAAGCACTGCACCAATTCTTTACTGC.........................................2730.3310010000000
.........................................................................................................................TGCACCAATTCTTTACTGTGCTT.....................................2330.3310100000000
.........................................................................................................................TGCACCAATTCTTTACTGTGCTTTGC..................................2630.3310100000000
.........................................................................................................................TGCACCAATTCTTTACTG..........................................1830.3310100000000
................................................................................................................................................................ACTCTGTGCCTTCCAATT...1840.2510100000000
..............................................................................................................................................................TTACTCTGTGCCTTCCAATT...2040.2510100000000
...............................................................................................................................................................TACTCTGTGCCTTCCAATT...1940.2510100000000
.........................................................................................................................TGCACCAATTCTTTACTGTGCTTTGCC.................................2740.2510010000000
droPer2
GTTACTAGGACTTAGTTCGCATGATTTTGATCCAGTATAGTGGTCGCCAGAGCATTTTCCACAGACTGTCTTTTTAAGGCAGTAGTTTCGCGTATGTCCAAAATCTTGGCATCTAAAGCACTGCACCAATTCTTTACTGTGCTTTGCTTTAATTACTGTTACTCTGTGCCTTCCAATTTGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................AATTACTGTTACTCTGTGCC...........2050.603300000
.....................................................................................................................................................TAATTACTGTTACTCTGTGCC...........2150.402200000
....................................................................................................................................................TTAATTACTGTTACTCTGTGCC...........2250.402200000
.........................................................................................................................................................TACTGTTACTCTGTGCCTTCCAATT...2550.402020000
.....................................................................................................................................................TAATTACTGTTACTCTGTGCCT..........2250.402110000
......................................................................................................................................................AATTACTGTTACTCTGTGCCT..........2150.402200000
..........................................................................................................................................................ACTGTTACTCTGTGCCTTCCAATT...2470.292020000
...................................TATAGTGGTCGCCAGAGCATTTTCCAC.......................................................................................................................2740.251010000
.....................................................................................................................................................TAATTACTGTTACTCTGTGCCTTCCAA.....2750.201010000
........................................TGGTCGCCAGAGCATTTTCCACAGAC...................................................................................................................2650.201010000
.........................................................................................................................................................TACTGTTACTCTGTGCCTTC........2050.201010000
...........................................TCGCCAGAGCATTTTCCACAGAC...................................................................................................................2350.201010000
.....................................................................................................................................................TAATTACTGTTACTCTGTGCCTTCCA......2650.201010000
...........................................TCGCCAGAGCATTTTCCACAGACTG.................................................................................................................2550.201010000
.....................................................................................................................................................TAATTACTGTTACTCTGTG.............1950.201010000
........................................................................................CGCGTATGTCCAAAATCTTGGCAT.....................................................................2460.171010000
..........................................................................................CGTATGTCCAAAATCTTGT........................................................................1960.171010000
..................................................................................TAGTTTCGCGTATGTCCAAAATCTTGG........................................................................2760.171010000
..........................................................................TAAGGCAGTAGTTTCGCGTATGTCC..................................................................................2560.171010000
.....................................................................................TTTCGCGTATGTCCAAAATCTTGGCA......................................................................2660.171010000
.....................................................................................TTTCGCGTATGTCCAAAATCTTGGC.......................................................................2560.171010000
..............................................................................GCAGTAGTTTCGCGTATGTCCA.................................................................................2260.171010000
.............................................................................GGCAGTAGTTTCGCGTATGTCCAAAA..............................................................................2660.171010000
........................................................................................CGCGTATGTCCAAAATCTTGGCATCTAAA................................................................2960.171010000
............................................................................................................................................................TGTTACTCTGTGCCTTCCAATTTG.2470.141010000
.................................................................................................................TAAAGCACTGCACCAATTCTTTACTG..........................................2670.141010000
..............................................................................................................................................................TTACTCTGTGCCTTCCAATT...2080.131010000
droAna3
ATCGCTTAC---------ACAAAGTAAAGATCCAGTAGCATGAGGGCCACTACATTTACCACAAATAGGGTCCAGGACACAATAGTTTTTAGAGTGCCCAAAAATTTGGCATCTTTGGCATTGAAGTAGATCCTTTCTACGAGAAGCACGCTCAACAGTGACTCTGTATCTACCAAGTTGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................TACATTTACCACAAATAGGGTCCAGG.........................................................................................................26120.425500000
.....................................................................................................................GCATTGAAGTAGATCCTTTCTACGAGAA....................................2880.252110000
.....................................................................................................................................................GCTCAACAGTGACTCTGTATCTACCAAG....2880.252200000
.............................................................................................................CATCTTTGGCATTGAAGTAGATCCT...............................................2580.252200000
.........................................................................................................TTGGCATCTTTGGCATTGAAGTAGATCC................................................2880.252200000
.................................................................................................................TTTGGCATTGAAGTAGATCCTTTCTAC.........................................2780.252020000
..................................................TACATTTACCACAAATAGGGTCCAGGA........................................................................................................27120.253300000
.....................................................................................................................GCATTGAAGTAGATCCTTTCTACGAG......................................2680.252200000
.....................................................................................................................GCATTGAAGTAGATCCTTTCTACGAGA.....................................2780.252020000
...........................................................CACAAATAGGGTCCAGGACACAATAGT...............................................................................................27130.233300000
..................................................................................................................................................CACGCTCAACAGTGACTCTGTATCTA.........2690.222200000
...............................................................AATAGGGTCCAGGACACAATAGTTTT............................................................................................26130.152200000
..........................................................................................................TGGCATCTTTGGCATTGAAGTAGATCCT...............................................2880.131100000
.......................................................................................................................................................TCAACAGTGACTCTGTATCTACCAAG....2680.131100000
......................................................................................................................................................CTCAACAGTGACTCTGTATCTACCAAG....2780.131100000
...............................................................................................................TCTTTGGCATTGAAGTAGATCCTTTC............................................2680.131010000
........................................................................................................................................................CAACAGTGACTCTGTATCTACCAA.....2480.131100000
......................................................................................................................................................CTCAACAGTGACTCTGTATCTACCAAGT...2880.131010000
...................................................................................................................TGGCATTGAAGTAGATCCTTTCTAC.........................................2580.131010000
..............................................................................................................................TAGATCCTTTCTACGAGAAGCACGCTC............................2790.111100000
..........................AAGATCCAGTAGCATGAGGGCCAC...................................................................................................................................2490.111100000
........................TAAAGATCCAGTAGCATGAGGGCCAC...................................................................................................................................2690.111100000
.......................GTAAAGATCCAGTAGCATGAGGGCCAC...................................................................................................................................2790.111100000
.........................................................................................................TTGGCATCTTTGGCATTGAAGTAGA...................................................2590.111100000
................................................................................................................................................AGCACGCTCAACAGTGACTCTGTATCTAC........2990.111100000
................................................................................................................................................AGCACGCTCAACAGTGACTCTGTATC...........26110.091100000
......................................................TTTACCACAAATAGGGTCCAGGACACAA...................................................................................................28110.091010000
........................................................TACCACAAATAGGGTCCAGGACACAAT..................................................................................................27110.091100000
....................................................CATTTACCACAAATAGGGTCCAGGACACA....................................................................................................29120.081100000
................................................ACTACATTTACCACAAATAGGGTCCAGG.........................................................................................................28120.081100000
........................................................TACCACAAATAGGGTCCAGGACACA....................................................................................................25120.081100000
...................................................ACATTTACCACAAATAGGGTCCAGG.........................................................................................................25120.081100000
.......................................................................................................................................TCTACGAGAAGCACGCTCAACAGTGAC...................27120.081100000
.........................................................................................................................................TACGAGAAGCACGCTCAACAGTG.....................23120.081001000
.................................................CTACATTTACCACAAATAGGGTCCAG..........................................................................................................26120.081100000
......................................................TTTACCACAAATAGGGTCCAGGACACA....................................................................................................27120.081100000
...............................................CACTACATTTACCACAAATAGGGTCCAGG.........................................................................................................29120.081100000
..............................................CCACTACATTTACCACAAATAGGGTCCAG..........................................................................................................29120.081100000
.........................................................ACCACAAATAGGGTCCAGGACACAATA.................................................................................................27120.081100000
....................................................CATTTACCACAAATAGGGTCCAGG.........................................................................................................24120.081100000
.........................................................................................................................................TACGAGAAGCACGCTCAACAGT......................22120.081010000
......................................................TTTACCACAAATAGGGTCCAGGA........................................................................................................23120.081100000
.........................................................ACCACAAATAGGGTCCAGGACAC.....................................................................................................23130.081100000
......................................CATGAGGGCCACTACATTTACCACAAA....................................................................................................................27130.081100000
..................................................................................TAGTTTTTAGAGTGCCCAAAAATTTG.........................................................................26130.081100000
................................................................ATAGGGTCCAGGACACAATAGTTTTTA..........................................................................................27130.081100000
................................................ACTACATTTACCACAAATAGGGTCC............................................................................................................25130.081100000
...........................................................CACAAATAGGGTCCAGGACACAATAGTT..............................................................................................28130.081100000
...........................................................CACAAATAGGGTCCAGGACACAATAGTTT.............................................................................................29130.081100000
.........................................................ACCACAAATAGGGTCCAGGA........................................................................................................20130.081100000
...........................................................CACAAATAGGGTCCAGGACACAATAG................................................................................................26130.081100000
...............................................................AATAGGGTCCAGGACACAATAGTTTTTA..........................................................................................28130.081100000
.............................................................CAAATAGGGTCCAGGACACAATAGTTTT............................................................................................28130.081100000
....................................................................................GTTTTTAGAGTGCCCAAAAATTTGGC.......................................................................26130.081100000
...............................................................................CAATAGTTTTTAGAGTGCCCAAAAATT...........................................................................27130.081010000
.....................................................................................TTTTTAGAGTGCCCAAAAATTTGGC.......................................................................25160.061010000
......................................................................................TTTTAGAGTGCCCAAAAATTTGGCATC....................................................................27160.061010000
.......................................................................................TTTAGAGTGCCCAAAAATTTGGCATC....................................................................26170.061010000
........................................................................................TTAGAGTGCCCAAAAATTTGGCATC....................................................................25170.061010000
.........................................................................................TAGAGTGCCCAAAAATTTGGCATC....................................................................24170.061010000
.........................................................................................TAGAGTGCCCAAAAATTTGGC.......................................................................21170.061010000
droBip1
GTCGCTCAC---------ACAGAGTAAGGAACCAGTTTCGTGAGGCCCATTACATTTACCACAAACTGCGTCCAGGACACAGTAGTTTTTCGAGTGCCCAAAAATTTGACATCTTTGACA--------ATTCCTTTCTGCGGAAAGCACGCTCGACAGTGACTCTATATCTCCCAAGATTTSizeHit CountTotal NormTotal
No Reads
droKik1
GACACTAGT---------GCAT-----AAAGCAGATCATATGAGGACCACTACATTTACCACAAATAGGGTCCTGGACGCAATAGTTCTTAGAGTGTCCAAATAGTTGGCATTTTTGGCACTGTAGCAACTCTTTTCTACGAGCAGCATGCTCAACAGT----------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTCGCTAGT---------GCAGAGCACACAGCCTGTAATATGAGGGCCACTACATTTACCACAGACAGGGTCCAGGACGCAGTAATTTCTCGAGTGCCCAAATATTTGGCA--------------ATAATTCTTTTCTACGAGTAGCACGTTCTATATTTACTCTGTGTCTGCCAATTTGGSizeHit CountTotal NormTotal
No Reads
droEle1
GTCGCTTGT---------GCAGTGTGCTGAGCCGGTCATATGAGGACCACTACATTTACCACAAATAGGGGCCTGGAGACAGTAGTTCTTAGAGTGCCCAAAAATTTGGCATCTTTGACATTGTAATAGGTCTTTTCTACGGGAGGCACGTTCAACAGTGACTCTGTATCTGCCAAGTTGASizeHit CountTotal NormTotal
No Reads
droRho1
ATCGCTTAC---------ACAGAGTGTGGAACCAGTAACATGAGAACCACTACATTTACCACAAACAGGGTCCTGAACACAATAGTTTTTAGAATGTCCAAAAATTTGGCATCTTTGACATTGAAGTAATTCTTTTCTACGGGGTGCACGCTCGACAGTGACTCTGTATCTCCCGAGTTGCSizeHit CountTotal NormTotal
No Reads
droBia1
ATCGCTTAC---------ACAGAGTACGGAACCAGTAACAAGAGGGCCACTACATTTACCACATACATGGTGCAGAACACAGAAGTTTTAAGAGTGCCCAAAAATTTGGCATCTTTGACATTGAAGTAATTCCTTTTTAGAGGACGCACGCTCGACAGT-------------------TTTSizeHit CountTotal NormTotal
No Reads
droTak1
GTCGCTTGT---------GCAGTGTGCTGAGCCGGTCATATGAGGACCACTACATTTACCACAAATAGGGGCCTGGAGACAGTAGTTCTTAGAGTGCCCAAAAATTTGGCATCTTTGACATTGTAATAGGTCTTTTCTACGGGAGGCACGTTCAACAGTGACTCTGTATCTGCCAAGTTGASizeHit CountTotal NormTotal
No Reads
droEug1
ATCGCCTAC---------ACAGAGAATGGAACCAGTAACATGATACCCACCACATTTACCACAGACAGGGTCCAGGATACAGTAGTTTTTAGAGTGCCCAAACATTTGGCATCTTTGACATTGAAGTAATTCCTTTCTACGGGAAGCACGCTCGACAGTGACTCTATGTCTTCCAAGTTGTSizeHit CountTotal NormTotal
No Reads
dm3
GTTACTCGT---------GCATAGCGTAGAGCCAGTTGTGTGGGGTCCAGCACACTTGCCACAGATTGGATCCTGGAGACAATAGTTTTTGGAGTGCCCAAAA---------------------------TGTTTCCTGCGCCGAGTGCGTTTTATGGTGACTCTGTGTCTACCAAATTGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................TGCCACAGATTGGATCCTGGAGACAA...................................................................................................2618.0080000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000020000000000010100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................GATTGGATCCTGGAGACAATAGT...............................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000
.................................................................TTGGATCCTGGAGACAATAGT...............................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000100000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
.......................................................TTGCCACAGATTGGATCCTGGAGACAA...................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000200000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TTGGATCCTGGAGACAATAGTTTTT...........................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TCCTGCGCCGAGTGCGTTTTATGGTG.....................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CTTGCCACAGATTGGATCCTG..........................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TAGCGTAGAGCCAGTTGTGTGGGG........................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CAGATTGGATCCTGGAGACAAA..................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
...................CATAGCGTAGAGCCAGTTGTGTGGG.........................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................TAGCGTAGAGCCAGTTGTGTG...........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000
...............................................................GATTGGATCCTGGAGACAATAGTT..............................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GAGCCAGTTGTGTGGGGTCCAGC..................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................TGCCACAGATTGGATCCTGGA........................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000
.............................................TCCAGCACACTTGCCACAGATTGGA...............................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TACTCGT---------GCATAGCGTAGAGCCAGT.................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TCCTGGAGACAATAGTTTTTGGAGTGC....................................................................................2712.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCGT---------GCATAGCGTAGAGCCAGTTGTG.............................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....TCGT---------GCATAGCGTAGAGCCAGTTGT..............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................AGCACACTTGCCACAGATTGGATCCTGGA........................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................AA---------------------------TGTTTCCTGCGCCGAGTGCGTT.............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CACAGATTGGATCCTGGAGAC.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TTGGATCCTGGAGACAATAGTTTTTG..........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCCAGTTGTGTGGGGTCCAGC..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CACAGATTGGATCCTGGAGACAATAGTT..............................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCCAGTTGTGTGGGGTCCAGCACACT.............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................CGAGTGCGTTTTATGGTGACT..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................ATCCTGGAGACAATAGTTTTTGGAGA......................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CGTAGAGCCAGTTGTGTG...........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................CACAGATTGGATCCTGGAGACAATAGT...............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................GGGGTCCAGCACACTTGCC.........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TTGGAGTGCCCAAAA---------------------------TGTTTCCTGCGC.......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................AGAGCCAGTTGTGTGGGGTC......................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TGCGTTTTATGGTGACTCTGTGTC...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TAGCGTAGAGCCAGTTGTGTGGG.........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TTGGATCCTGGAGACAATAGC...............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................TAGAGCCAGTTGTGTGGGGTCCAG...................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................TCCTGCGCCGAGTGCGTTTTATGGTGACT..................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GCGTAGAGCCAGTTGTGTGGGGT.......................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATAGCGTAGAGCCAGTTGTGTGGGGT.......................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TACTCGT---------GCATAGCGTAGAGC.....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TTGTGTGGGGTCCAGCACACTTGCCACA......................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................ACACTTGCCACAGATTGGATCCTGG.........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................TGCGTTTTATGGTGACTCTGTGTCTAC........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................TAGAGCCAGTTGTGTGGGG........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTACTCGT---------GCATAGCGTAGAGCCAGTT................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATAGCGTAGAGCCAGTTGTGTGGGG........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGT---------GCATAGCGTAGAGCCAGTTGT..............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CAGATTGGATCCTGGAGACAATAGT...............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................GTTTTTGGAGTGCCCAAAA---------------------------TG.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATAGCGTAGAGCCAGTTGTGT............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................TAGCGTAGAGCCAGTTGTGTGGGGT.......................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTACTCGT---------GCATAGCGTAGAGCCAGT.................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GATTGGATCCTGGAGACAATAGG...............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................CACTTGCCACAGATTGGATCCTGGAA.......................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CACTTGCCACAGATTGGATCCT...........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TAGTTTTTGGAGTGCCCAAAA---------------------------TG.................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TTCCTGCGCCGAGTGCGTTTTATGGTG.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TAGAGCCAGTTGTGTGGGGTC......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................CCAGTTGTGTGGGGTCCAGCACACT.............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGTTGTGTGGGGTCCAGCACA...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................GATTGGATCCTGGAGACA....................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGCCACAGATTGGATCCTGGAGAC.....................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....TCGT---------GCATAGCGTAGAGC.....................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CATAGCGTAGAGCCAGTTG...............................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GTCCCTCGT---------GCATAGCGTAGAGCCTGTTGCGTGGGGCCTAGCACACTTGCCACAGATTGGATCCTGGAGACAGTAGTTTTTGGAGTGCCCAAAAATGTGGCATCTCAGACATTGCAGCAATTCTTGCCTGCGACGAGCGCGTTCTATGGTGACTCTGTGTCTACCAAATTGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................TTGGATCCTGGAGACAGTAGTTTTT...........................................................................................2519.00900400000013100000
.....................TAGCGTAGAGCCTGTTGCGTGGGGC.......................................................................................................................................2517.00700000000006100000
..........................................................................................................TGGCATCTCAGACATTGCAGC......................................................2113.00300000000000003000
.....................................................................................................................................TGCCTGCGACGAGCGCGTTCTATGG.......................2513.00300100000002000000
................................................................................................................................................AGCGCGTTCTATGGTGACTCTGTGTC...........2612.00200000000002000000
.........................................................................................................................TGCAGCAATTCTTGCCTGCGACGAGC..................................2612.00200000000002000000
.....................................................ACTTGCCACAGATTGGATCCT...........................................................................................................2112.00200000000000002000
.......................................................TTGCCACAGATTGGATCCTGG.........................................................................................................2112.00200000001001000000
....................................................................................................................................TTGCCTGCGACGAGCGCGTTCTATGG.......................2612.00200000000002000000
.................................................................TTGGATCCTGGAGACAGTAGTTTT............................................................................................2412.00200000000002000000
.....TCGT---------GCATAGCGTAGAGCCTGTTGCG.............................................................................................................................................2612.00200000000002000000
.................................................................TTGGATCCTGGAGACAGT..................................................................................................1812.00200000000002000000
.............................................................CAGATTGGATCCTGGAGACAG...................................................................................................2112.00200000000000002000
............................................................................................................................AGCAATTCTTGCCTGCGACGAG...................................2211.00100000000001000000
.........................................................................................................................TGCAGCAATTCTTGCCTGCGACGAG...................................2511.00100000000001000000
.................................TGTTGCGTGGGGCCTAGCACACTTGCCA........................................................................................................................2811.00100000000001000000
..........................................................................................................................................GCGACGAGCGCGTTCTA..........................1711.00100000000001000000
.....................TAGCGTAGAGCCTGTTGCGTGGGGCCTAG...................................................................................................................................2911.00100000000000100000
........................................................................................................TGTGGCATCTCAGACA.............................................................1611.00100000000001000000
........................................................TGCCACAGATTGGATCCTGGAGACAGTT.................................................................................................2811.00100000000001000000
........................................................................................TTGGAGTGCCCAAAAATGTGGC.......................................................................2211.00100000000001000000
...............................................................................................................................AATTCTTGCCTGCGACGAGCGCGT..............................2411.00100000000001000000
.............................................................................................................................................ACGAGCGCGTTCTATGG.......................1711.00100000000001000000
...CCTCGT---------GCATAGCGTAGAGCCTGT.................................................................................................................................................2411.00100010000000000000
........T---------GCATAGCGTAGAGCCTGTTGCGTGG..........................................................................................................................................2611.00100010000000000000
............................................................................................................................................GACGAGCGCGTTCTATGGTGA....................2111.00100000000001000000
..........................TAGAGCCTGTTGCGTGGGGCC......................................................................................................................................2111.00100000000001000000
........................................................................................................TGTGGCATCTCAGACAT............................................................1711.00100000000001000000
.................................................................................................................................TTCTTGCCTGCGACGAGCGCGTTCTA..........................2611.00100000000001000000
..............................GCCTGTTGCGTGGGGCCTAGCACACT.............................................................................................................................2611.00100000000001000000
.......................................................TTGCCACAGATTGGATCCTGGAGACAG...................................................................................................2711.00100000000001000000
........................................................TGCCACAGATTGGATCCTGGAGACAGT..................................................................................................2711.00100000000001000000
.................................................................TTGGATCCTGGAGACA....................................................................................................1611.00100000000001000000
...............................................................................................................TCTCAGACATTGCAGCAATTCTTGC.............................................2511.00100000001000000000
......................................................................................TTTTGGAGTGCCCAAAA..............................................................................1711.00100000000001000000
........T---------GCATAGCGTAGAGCCTGTTGCGTG...........................................................................................................................................2511.00100000000001000000
.................................................................TTGGATCCTGGAGACAGTAGTTT.............................................................................................2311.00100000000001000000
...............................................................................................................................AATTCTTGCCTGCGACGAGCG.................................2111.00100000000001000000
......................................................................................TTTTGGAGTGCCCAAAAATGTGG........................................................................2311.00100000000001000000
.....TCGT---------GCATAGCGTAGAGCCTGTTGC..............................................................................................................................................2511.00100000000001000000
........T---------GCATAGCGTAGAGCCTGTTGCGTGGG.........................................................................................................................................2711.00100000001000000000
........................................................TGCCACAGATTGGATCCTGGAG.......................................................................................................2211.00100000000001000000
.....................TAGCGTAGAGCCTGTTGCGTGGG.........................................................................................................................................2311.00100000000001000000
..........................TAGAGCCTGTTGCGTGGGGCCTAGCAA................................................................................................................................2711.00100000000001000000
.................................................................TTGGATCCTGGAGACAGTAGTTTTTG..........................................................................................2611.00100000000001000000
.................................................................TTGGATCCTGGAGACAGTAGTT..............................................................................................2211.00100000000001000000
.........................................................................................TGGAGTGCCCAAAAATGTGGC.......................................................................2111.00100000000001000000
........................................................................................................TGTGGCATCTCAGACATTGCAG.......................................................2211.00100000001000000000
..................................................................TGGATCCTGGAGACAGT..................................................................................................1711.00100000000001000000
...................................................................................................................................................GCGTTCTATGGTGACTCTGTGTCTAC........2621.00200000000002000000
.....................TAGCGTAGAGCCTGTTGCGTGGGGCCTA....................................................................................................................................2811.00100000000001000000
.....................TAGCGTAGAGCCTGTTGCGTGGGG........................................................................................................................................2411.00100000000000010000
..............................................................................................................................................CGAGCGCGTTCTATGGTGACTCTGTG.............2611.00100000000001000000
...............................................................................................................TCTCAGACATTGCAGCAATTCTTG..............................................2411.00100000010000000000
..................................................................TGGATCCTGGAGACAGTAGTTTTTGGA........................................................................................2711.00100000000000010000
...........................................................CACAGATTGGATCCTGGAGAC.....................................................................................................2111.00100000000000001000
.......................................................................................TTTGGAGTGCCCAAAAATGTGGCATC....................................................................2611.00100000000001000000
.....................................................................................................................................TGCCTGCGACGAGCGCGTTCTATGGT......................2611.00100000000001000000
.......................................GTGGGGCCTAGCACACTTGCCACAGAT...................................................................................................................2711.00100000000001000000
..................................................................TGGATCCTGGAGACAGTAGTTTTT...........................................................................................2411.00100000000001000000
......CGT---------GCATAGCGTAGAT......................................................................................................................................................1620.50100000000001000000
GTCCCTCGT---------GCATAGCGTAGA.......................................................................................................................................................2120.50100000000001000000
..................................................................................................................................TCTTGCCTGCGACGAGC..................................1720.50100000000001000000
...................................................................................AGTTTTTGGAGTGCC...................................................................................1540.25100000000001000000
droSec2
GTCACTTAT---------GCACAAAGCAGACCCGGTCATATGGGGACCACTACATTTACCACAAATAGGATCCTGGGCGCAATAGTTCTTAGAGTGTCCAAAAATTTGGCATCTTTGACATTGTAGCAGTTCTTTTCTACGTGTAGCGCGCTCAACAGTGACTCTGTATCTGCCAAGTCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................TACGTGTAGCGCGCTCAACAGTGAC...................25201.302680171
........T---------GCACAAAGCAGACCCGGTCATATGG..........................................................................................................................................2611.0011000
......................................................................................TCTTAGAGTGTCCAAAAATTTGGCA......................................................................25200.951930142
......................................................................................TCTTAGAGTGTCCAAAAATTTGGCATC....................................................................27200.801630130
......................................................................................TCTTAGAGTGTCCAAAAATTTGGC.......................................................................24200.65138131
.........................................................................................................................................TACGTGTAGCGCGCTCAACAGTG.....................23200.4590360
.....................................................................................TTCTTAGAGTGTCCAAAAATTTGGCA......................................................................26200.4592070
.........................................................................................................................................TACGTGTAGCGCGCTCAACAGTGACTC.................27200.3575020
........................................................................................................................................CTACGTGTAGCGCGCTCAACAGTG.....................24200.3064020
.........................................................................................................................................TACGTGTAGCGCGCTCAACAGTGACT..................26200.3062022
........................................................................................................................................CTACGTGTAGCGCGCTCAACAGTGA....................25200.3064020
...................................................................................................................................CTTTTCTACGTGTAGCGCGCTCAACAG.......................27200.2552021
......................................TATGGGGACCACTACATTTACCACAAA....................................................................................................................27200.2554010
.........................................................................................................................................TACGTGTAGCGCGCTCAACAGTGA....................24200.2550140
..............................CCCGGTCATATGGGGACCACTACATT.............................................................................................................................26200.2043010
...................................................ACATTTACCACAAATAGGATCCTGG.........................................................................................................25200.2040031
.....................................................................................................................................TTTCTACGTGTAGCGCGCTCAACA........................24200.1532010
........................................................................................................................................CTACGTGTAGCGCGCTCAACAG.......................22200.1531020
...................................................ACATTTACCACAAATAGGATC.............................................................................................................21200.1532010
........................................................................................................................................CTACGTGTAGCGCGCTCAACAGT......................23200.1533000
.........................................................................................................................................TACGTGTAGCGCGCTCAACAGT......................22200.1531110
.......................................................TTACCACAAATAGGATCCTGG.........................................................................................................21200.1533000
.....................................................................................TTCTTAGAGTGTCCAAAAATTTGG........................................................................24200.1021010
........................................................................................................................................CTACGTGTAGCGCGCTCAACAGTGAC...................26200.1021010
....................................................................................GTTCTTAGAGTGTCCAAAAATTTGGCA......................................................................27200.1020020
...........................................................CACAAATAGGATCCTGGGCGC.....................................................................................................21200.1021100
....................................................CATTTACCACAAATAGGATCCTG..........................................................................................................23200.1022000
...............................................................................................................................................TAGCGCGCTCAACAGTGACTC.................21200.1022000
.....................................................................ATCCTGGGCGCAATAGTTCTT...........................................................................................21200.1021001
.......................................................................................CTTAGAGTGTCCAAAAATTTGGC.......................................................................23200.1022000
.................................................................TAGGATCCTGGGCGCAATAG................................................................................................20200.1022000
..................................................................................................................................TCTTTTCTACGTGTAGCGCGC..............................21200.1022000
........................................................TACCACAAATAGGATCCTGGG........................................................................................................21200.1022000
....................................CATATGGGGACCACTACATTT............................................................................................................................21200.1022000
...................................................ACATTTACCACAAATAGGATCCT...........................................................................................................23200.1021010
..................................................TACATTTACCACAAATAGGATCCTGGG........................................................................................................27200.1022000
...................................................................................................................................CTTTTCTACGTGTAGCGCGCTCAACA........................26200.1020020
....................................................CATTTACCACAAATAGGATCCTGGG........................................................................................................25200.1022000
......................................................................................TCTTAGAGTGTCCAAAAATTTGGCAT.....................................................................26200.1020020
...................................................ACATTTACCACAAATAGGATCCTGGG........................................................................................................26200.1020020
.................................................................TAGGATCCTGGGCGCAATAGTTCTTA..........................................................................................26200.1022000
.....................................................................................TTCTTAGAGTGTCCAAAAATTTGGCATC....................................................................28200.1020020
........................................................................................................................................CTACGTGTAGCGCGCTCAACA........................21200.1020020
..................................................................................................................................................CGCGCTCAACAGTGACTCTG...............20200.0511000
..........................................................................................................TGGCATCTTTGACATTGTAGCAGTTC.................................................26200.0511000
...............................................................................................................................................TAGCGCGCTCAACAGTGACT..................20200.0511000
.........................................................................................................................................TACGTGTAGCGCGCTCAACAG.......................21200.0510010
.......................................................................................................................................TCTACGTGTAGCGCGCTCAACAG.......................23200.0511000
.....................................................ATTTACCACAAATAGGATCCTGGG........................................................................................................24200.0511000
................................................................................................................................................AGCGCGCTCAACAGTGACTCTGTA.............24200.0511000
.............................ACCCGGTCATATGGGGACCAC...................................................................................................................................21200.0511000
....................................................................................................................................TTTTCTACGTGTAGCGCGCTCAAC.........................24200.0511000
....................................................................................................................................................CGCTCAACAGTGACTCTGTATCTGC........25200.0511000
...........................................................................GGCGCAATAGTTCTTAGAGTG.....................................................................................21200.0511000
.........................................................................................TAGAGTGTCCAAAAATTTGG........................................................................20200.0511000
......................................................TTTACCACAAATAGGATCCTGGGCGA.....................................................................................................26200.0510010
........................................................TACCACAAATAGGATCCTGGGCGCA....................................................................................................25200.0511000
...................................................................................................................TGACATTGTAGCAGTTCTTTTC............................................22200.0511000
................................................................................................................................................AGCGCGCTCAACAGTGACTCTGTATC...........26200.0511000
............................................................................................................................AGCAGTTCTTTTCTACGTGTA....................................21200.0511000
.........................................................................TGGGCGCAATAGTTCTTAGAG.......................................................................................21200.0510001
....................................................................................................................................TTTTCTACGTGTAGCGCGCTCAACAGT......................27200.0511000
............................................................................................................GCATCTTTGACATTGTAGCAG....................................................21200.0511000
......................................................................................................................................TTCTACGTGTAGCGCGCTCAACAGTGAC...................28200.0511000
.................................................................................................................TTTGACATTGTAGCAGTTCT................................................20200.0511000
......................................................TTTACCACAAATAGGATCCTG..........................................................................................................21200.0511000
........................................................................................................................................................CAACAGTGACTCTGTATCTGCCAAGT...26200.0511000
................................................................................................................CTTTGACATTGTAGCAGTTCTTTTC............................................25200.0511000
.................................................CTACATTTACCACAAATAGG................................................................................................................20200.0511000
...............................................................................................................TCTTTGACATTGTAGCAGTTCTTT..............................................24200.0511000
......................................................TTTACCACAAATAGGATCCTGGGCGCA....................................................................................................27200.0511000
......................................................................................................................................TTCTACGTGTAGCGCGCTCAACAG.......................24200.0511000
..............................CCCGGTCATATGGGGACCACTACAT..............................................................................................................................25200.0511000
.......................................ATGGGGACCACTACATTTACCACA......................................................................................................................24200.0511000
.......................................................................................................................................................TCAACAGTGACTCTGTATCTGCCAAGTC..28200.0511000
.........................................................................................................................................TACGTGTAGCGCGCTCAACAGTA.....................23200.0511000
......................................................................................................................CATTGTAGCAGTTCTTTTCTA..........................................21200.0511000
.............................................................................................................................GCAGTTCTTTTCTACGTGTAGCGCG...............................25200.0511000
.......................................................................................................................................................TCAACAGTGACTCTGTATCTGCCAA.....25200.0511000
.......................................................................................................................................TCTACGTGTAGCGCGCTCAAC.........................21200.0511000
.................................................................TAGGATCCTGGGCGCAATAGTTC.............................................................................................23200.0510010
...................................................................................................................TGACATTGTAGCAGTTCTTTAAA...........................................23200.0510010
......................................................TTTACCACAAATAGGATCCTGGGCG......................................................................................................25200.0510001
.......................................................TTACCACAAATAGGATCCTGGGCGC.....................................................................................................25200.0510010
.........................................................................................................TTGGCATCTTTGACATTGTAG.......................................................21200.0511000
......................................................................................................................................TTCTACGTGTAGCGCGCTCAACAGT......................25200.0511000
.........................................................................................................TTGGCATCTTTGACATTGTAGCAGTTC.................................................27200.0511000
...........................................................................................................................................................CAGTGACTCTGTATCTGCCAAGTC..24200.0511000
..............................................................................................TGTCCAAAAATTTGGCATCTT..................................................................21200.0511000
..................................................TACATTTACCACAAATAGGATCCTGG.........................................................................................................26200.0511000
........................................................................................................TTTGGCATCTTTGACATTGTAGCAGTT..................................................27200.0511000
...................................................................................................................TGACATTGTAGCAGTTCTTTTCTACG........................................26200.0511000
.............................................................................................................CATCTTTGACATTGTAGCAG....................................................20200.0510010
..............................................................................................................ATCTTTGACATTGTAGCAGTTCTT...............................................24200.0511000
.................................................CTACATTTACCACAAATAGGATCCTGG.........................................................................................................27200.0511000
.............................................................CAAATAGGATCCTGGGCGCAA...................................................................................................21200.0510001
........................................................................................................................................CTACGTGTAGCGCGCTCAACAGTGACTC.................28200.0511000
.....................................................................................................................................TTTCTACGTGTAGCGCGCTCAACAG.......................25200.0511000
...........................................................................................................................TAGCAGTTCTTTTCTACGTGTAGC..................................24200.0511000
..................................................................................TAGTTCTTAGAGTGTCCAAAAATT...........................................................................24200.0510010
.......................................................TTACCACAAATAGGATCCTGGGCGCAA...................................................................................................27200.0511000
........................................................................................................TTTGGCATCTTTGACATTGTAGCAGT...................................................26200.0511000
...................................................................GGATCCTGGGCGCAATAGTTCTTA..........................................................................................24200.0511000
.................................................................................................................TTTGACATTGTAGCAGTTCTTTTCTACG........................................28200.0511000
.............................................................................CGCAATAGTTCTTAGAGTGTCCAAA...............................................................................25200.0511000
......................................................................TCCTGGGCGCAATAGTTCTTAGAGTGTC...................................................................................28200.0510010
...........................................................CACAAATAGGATCCTGGGCG......................................................................................................20200.0511000
........................................TGGGGACCACTACATTTACCACAAA....................................................................................................................25200.0510010
...................................................ACATTTACCACAAATAGGATCCTG..........................................................................................................24200.0510010
..................................................................................TAGTTCTTAGAGTGTCCAAA...............................................................................20200.0511000
..............................................................................................................................CAGTTCTTTTCTACGTGTAGC..................................21200.0510100
...............................................................................CAATAGTTCTTAGAGTGTCCA.................................................................................21200.0511000
.........................................................................................................TTGGCATCTTTGACATTGTAGCAGT...................................................25200.0511000
.................................................CTACATTTACCACAAATAGGATCCT...........................................................................................................25200.0510010
..........................................................................................................TGGCATCTTTGACATTGTAGC......................................................21200.0511000
.....................................................................................TTCTTAGAGTGTCCAAAAATTTG.........................................................................23200.0511000
........................................................................................................TTTGGCATCTTTGACATTGTA........................................................21200.0511000
..................................................................................................................................................CGCGCTCAACAGTGACTCTGTATCTGC........27200.0511000
...................................TCATATGGGGACCACTACATTTACCACA......................................................................................................................28200.0511000
......................................TATGGGGACCACTACATTTACCACA......................................................................................................................25200.0511000
.................................................................................ATAGTTCTTAGAGTGTCCAT................................................................................20200.0510100
......................................TATGGGGACCACTACATTTACCACAAAT...................................................................................................................28200.0511000
droYak3
ACCACTCGT---------GCACAGCATAGAACCAGTTGCGTGAGGGCCAGCGCACTTGCCACATATAGGGTCCTGGAGACAATAGTTTTTGGAGTGTCCAAAGATGTGGCATCCCATACATTGCAGCACTTCTTTTCTGCGACGAGCGCGTTCTATGGTGACTCTGTGTCTACCGAGTTGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................TGCGTGAGGGCCAGCGCACTTGCCACA......................................................................................................................2784.3835032110010000
......................................................................................................................................TTCTGCGACGAGCGCGTTCTATGGT......................2583.7530010000000029
.......................GCATAGAACCAGTTGCGTGAGGGCC.....................................................................................................................................2583.38270151110000000
.....TCGT---------GCACAGCATAGAACCAGTTGCGTGA..........................................................................................................................................2983.1325000000000025
.......................GCATAGAACCAGTTGCGTGAGGGC......................................................................................................................................2483.0024051510030000
...............................................................................................................................................GAGCGCGTTCTATGGTGACTCTGTGTC...........2782.6321010000000020
......................................................................TCCTGGAGACAATAGTTTTTGGAGT......................................................................................2572.1415000000100014
.......................................................................................TTTGGAGTGTCCAAAGATGTGGC.......................................................................2372.141507320030000
.....TCGT---------GCACAGCATAGAACCAGTTGCGT............................................................................................................................................2782.1317010000000016
.......................................................................................................................................TCTGCGACGAGCGCGTTCTATGGTGACT..................2881.8815000000000015
.......................................................................................................................................TCTGCGACGAGCGCGTTCTATGGTGAC...................2781.8815050000000010
...............................................................................................................TCCCATACATTGCAGCACTTCTTTTC............................................2671.861304000000009
......................................................................................TTTTGGAGTGTCCAAAGATGTGGC.......................................................................2471.711206210030000
.........................................................................................TGGAGTGTCCAAAGATGTGGCATCCCA.................................................................2781.6313010000000012
........T---------GCACAGCATAGAACCAGTTGCGTG...........................................................................................................................................2581.3811011000000000
.........................................................................................................................................TGCGACGAGCGCGTTCTATGGTGACTC.................2781.3811011000000000
......................................................................................................................................TTCTGCGACGAGCGCGTTCTATGGTGAC...................2881.3811000000000011
..............................................................................................TGTCCAAAGATGTGGCATCCCATACAT............................................................2771.29906200000001
...................................................................................................................................................GCGTTCTATGGTGAC...................1581.2510000000000010
.........................................................................................................................................TGCGACGAGCGCGTTCTATGGTGAC...................2581.251002000000008
.......................GCATAGAACCAGTTGCGTGAGGGCCAG...................................................................................................................................2781.13909000000000
..........................TAGAACCAGTTGCGTGAGGGCCAGCG.................................................................................................................................2681.13909000000000
....................................TGCGTGAGGGCCAGCGCACTTGCCA........................................................................................................................2581.00808000000000
..................GCACAGCATAGAACCAGTTGCGTGAGGG.......................................................................................................................................2880.88700000000007
....................................TGCGTGAGGGCCAGCGCACTTGCCAC.......................................................................................................................2680.88706100000000
.....TCGT---------GCACAGCATAGAACCAGTTGCG.............................................................................................................................................2680.88707000000000
.....................................................................................................................................TTTCTGCGACGAGCGCGTTCTATGGT......................2680.88702000000005
ACCACTCGT---------GCACAGCATAGAACCAGT.................................................................................................................................................2780.75606000000000
..........................................................................................................TGGCATCCCATACATTGCAGC......................................................2170.71500000000005
.....................................................................................TTTTTGGAGTGTCCAAAGATGTGGC.......................................................................2570.71504000010000
........................................................TGCCACATATAGGGTCCTGGAGACAA...................................................................................................2680.63504000010000
.......................................................................................TTTGGAGTGTCCAAAGATGTGGCA......................................................................2470.57404000000000
........................................................................................................TGTGGCATCCCATACATTGCAGCACT...................................................2670.57404000000000
...................CACAGCATAGAACCAGTTGCGTGAGGG.......................................................................................................................................2780.50404000000000
.......................GCATAGAACCAGTTGCGTGAGGG.......................................................................................................................................2380.50403100000000
....CTCGT---------GCACAGCATAGAACCAGTTGCG.............................................................................................................................................2780.50400000000004
..CACTCGT---------GCACAGCATAGAACCAGT.................................................................................................................................................2580.50403010000000
.......................................................................................TTTGGAGTGTCCAAAGATGTGG........................................................................2270.43303000000000
..........................................................................................................TGGCATCCCATACATTGCAGCACTTC.................................................2670.43303000000000
......................................................................................TTTTGGAGTGTCCAAAGATGTGGCA......................................................................2570.43302000010000
....................................TGCGTGAGGGCCAGCGCACTTGCC.........................................................................................................................2480.38301200000000
.......................................................................................................................................TCTGCGACGAGCGCGTTCTATGGTG.....................2580.38301010100000
..........................TAGAACCAGTTGCGTGAGGGCCAGCGCA...............................................................................................................................2880.38302000010000
........T---------GCACAGCATAGAACCAGTTGCGTGA..........................................................................................................................................2680.38303000000000
.....................................GCGTGAGGGCCAGCGCACTTGCCACA......................................................................................................................2680.38303000000000
..........................TAGAACCAGTTGCGTGAGGGCC.....................................................................................................................................2280.38302100000000
..............................................CCAGCGCACTTGCCACATATAGGGTCC............................................................................................................2780.38301000000002
................................................AGCGCACTTGCCACATATAGGGTCC............................................................................................................2580.38303000000000
..........................TAGAACCAGTTGCGTGAGGGCCAG...................................................................................................................................2480.38303000000000
........................................................TGCCACATATAGGGTCCTGGAGACAAT..................................................................................................2780.38303000000000
........................................................................................TTGGAGTGTCCAAAGATGTGGCATC....................................................................2590.33301200000000
................................................................................................TCCAAAGATGTGGCATCCCATACAT............................................................2570.29202000000000
...............................................................TATAGGGTCCTGGAGACAATAGTTT.............................................................................................2570.29202000000000
......................................................................TCCTGGAGACAATAGTTTTTGGAGTG.....................................................................................2670.29202000000000
...................................................................................................................ATACATTGCAGCACTTCTTTTCTGC.........................................2570.29202000000000
.................................................................TAGGGTCCTGGAGACAATAGTTTTTG..........................................................................................2670.29202000000000
.....................................GCGTGAGGGCCAGCGCACTTGCCAC.......................................................................................................................2580.25202000000000
...................CACAGCATAGAACCAGTTGCGTGAGG........................................................................................................................................2680.25202000000000
........................................................TGCCACATATAGGGTCCTGGAGACA....................................................................................................2580.25202000000000
................................CAGTTGCGTGAGGGCCAGCGCACT.............................................................................................................................2480.25202000000000
......................................................................................................................................TTCTGCGACGAGCGCGTTCTATGGTG.....................2680.25202000000000
....................................................................................................................................................CGTTCTATGGTGACTCTGTGTCTACC.......2680.25202000000000
..................................................................................................................................TCTTTTCTGCGACGAGCGCGTTCTA..........................2580.25202000000000
....CTCGT---------GCACAGCATAGAACCAGTTGCGT............................................................................................................................................2880.25202000000000
..............................................CCAGCGCACTTGCCACATATAGGG...............................................................................................................2480.25202000000000
..................................................................................................................................................CGCGTTCTATGGTGACTCTGTGTCTAC........2780.25202000000000
........................................TGAGGGCCAGCGCACTTGCCACATAT...................................................................................................................2680.25202000000000
......CGT---------GCACAGCATAGAACCAGTTGCGTG...........................................................................................................................................2780.25202000000000
.....................CAGCATAGAACCAGTTGCGTGAGGGC......................................................................................................................................2680.25201010000000
.........................................................................................................................................TGCGACGAGCGCGTTCTATGGTGA....................2480.25200100010000
........................................................TGCCACATATAGGGTCCTGGAGAC.....................................................................................................2480.25202000000000
........................CATAGAACCAGTTGCGTGAGGGCCAG...................................................................................................................................2680.25202000000000
....................................TGCGTGAGGGCCAGCGCACTTG...........................................................................................................................2280.25202000000000
.......................GCATAGAACCAGTTGCGTGAGGGCCA....................................................................................................................................2680.25201100000000
..........................TAGAACCAGTTGCGTGAGGGCCAGC..................................................................................................................................2580.25201100000000
..........................................................................................................................................GCGACGAGCGCGTTCTATGGTGACTC.................2680.25202000000000
..................................................................................................................................................CGCGTTCTATGGTGACTCTGTGTC...........2480.25202000000000
........................................................................................TTGGAGTGTCCAAAGATGTGGCATCC...................................................................2680.25202000000000
......................................................................................................................................TTCTGCGACGAGCGCGTTCTATGG.......................2480.25202000000000
..................................................................................................................................................CGCGTTCTATGGTGACTCTGTGTCT..........2580.25202000000000
................................................................................................................................................AGCGCGTTCTATGGTGACTCTGTGTC...........2680.25202000000000
ACCACTCGT---------GCACAGCATAGAACC....................................................................................................................................................2480.25202000000000
......................................................................................................................................................TTCTATGGTGACTCTGTGTCTACCGAG....2780.25202000000000
........................................TGAGGGCCAGCGCACTTGCCACA......................................................................................................................2380.25202000000000
.......................................................................................................................................TCTGCGACGAGCGCGTTCTATGGTGA....................2680.25201000010000
................................................AGCGCACTTGCCACATATAGGGTCCTG..........................................................................................................2780.25202000000000
........................................................................................TTGGAGTGTCCAAAGATGTGGCA......................................................................2390.22202000000000
........................................................................................TTGGAGTGTCCAAAGATGTGGC.......................................................................2290.22201000010000
................................................................ATAGGGTCCTGGAGACAATAGTTTT............................................................................................2570.14101000000000
...................................................................................................AAAGATGTGGCATCCCATACATTGC.........................................................2570.14101000000000
...................................................................................................AAAGATGTGGCATCCCATACATTGCA........................................................2670.14101000000000
.............................................................................GACAATAGTTTTTGGAGTGTCCAAAGA.............................................................................2770.14100010000000
............................................................................................................................AGCACTTCTTTTCTGCGACGAGCGCG...............................2670.14101000000000
...........................................................................................................GGCATCCCATACATTGCAGCACTTC.................................................2570.14101000000000
...................................................................................................AAAGATGTGGCATCCCATACATTGCAG.......................................................2770.14101000000000
................................................................................................TCCAAAGATGTGGCATCCCATACATTGC.........................................................2870.14101000000000
......................................................................TCCTGGAGACAATAGTTTTTGGAG.......................................................................................2470.14101000000000
...................................................................GGGTCCTGGAGACAATAGTTTTTGGAG.......................................................................................2770.14101000000000
................................................................................................TCCAAAGATGTGGCATCCCATACATT...........................................................2670.14101000000000
..................................................................AGGGTCCTGGAGACAATAGTTTTTG..........................................................................................2570.14101000000000
..............................................................................................TGTCCAAAGATGTGGCATCCCATAC..............................................................2570.14101000000000
..................................................................................TAGTTTTTGGAGTGTCCAAAGA.............................................................................2270.14101000000000
....................................................................................................................TACATTGCAGCACTTCTTTTCTGCGAC......................................2770.14101000000000
....................................................................................................................TACATTGCAGCACTTCTTTTCTGC.........................................2470.14101000000000
..............................................................................................TGTCCAAAGATGTGGCATCCCATACA.............................................................2670.14101000000000
....................................................................................................AAGATGTGGCATCCCATACATTGCAGC......................................................2770.14101000000000
........................................................................................................TGTGGCATCCCATACATTGCAGCACTTCT................................................2970.14101000000000
....................................................................................................................TACATTGCAGCACTTCTTTTCTGCGACG.....................................2870.14101000000000
......................................................................................................GATGTGGCATCCCATACATTGCAGCAC....................................................2770.14101000000000
......................................................................................TTTTGGAGTGTCCAAAGATGTG.........................................................................2270.14100010000000
.........................................................................................................................TGCAGCACTTCTTTTCTGCGACGAGCGC................................2870.14101000000000
.........................................................................................................................TGCAGCACTTCTTTTCTGCG........................................2070.14101000000000
..........................................................................................................................GCAGCACTTCTTTTCTGCGACGAGCGCG...............................2870.14101000000000
...............................................................................................................TCCCATACATTGCAGCACTTCTTTTCTG..........................................2870.14101000000000
..........................................................................................................TGGCATCCCATACATTGCAGCACTTCTT...............................................2870.14101000000000
.........................................................................TGGAGACAATAGTTTTTGGAGTGTC...................................................................................2570.14100000010000
..............................................................................................................ATCCCATACATTGCAGCACTTCTTT..............................................2570.14100100000000
.....................................................................................TTTTTGGAGTGTCCAAAGATGTGGCA......................................................................2670.14101000000000
..............................................................................ACAATAGTTTTTGGAGTGTCCAAAGA.............................................................................2670.14101000000000
...............................................................................................................TCCCATACATTGCAGCACTTCTTT..............................................2470.14101000000000
.................................................................................................................CCATACATTGCAGCACTTCTTTTCTGC.........................................2770.14101000000000
....................................TGCGTGAGGGCCAGCGCACTT............................................................................................................................2180.13101000000000
....................................................CACTTGCCACATATAGGGTCCTGGAG.......................................................................................................2680.13100100000000
.........................................................................................TGGAGTGTCCAAAGATGTGGCATCC...................................................................2580.13101000000000
.......................GCATAGAACCAGTTGCGTGAGG........................................................................................................................................2280.13100100000000
.............................AACCAGTTGCGTGAGGGCCAGCGCA...............................................................................................................................2580.13100010000000
..............................................................................................TGTCCAAAGATGTGGCATCCCATA...............................................................2480.13101000000000
......................................................................................................................................................TTCTATGGTGACTCTGTGTCTACCGA.....2680.13101000000000
.....................................GCGTGAGGGCCAGCGCACTTGCCA........................................................................................................................2480.13101000000000
............................GAACCAGTTGCGTGAGGGCCT....................................................................................................................................2180.13101000000000
.........................................................GCCACATATAGGGTCCTGGAGACAA...................................................................................................2580.13101000000000
.CCACTCGT---------GCACAGCATAGAACCAGTTG...............................................................................................................................................2880.13101000000000
.........................................GAGGGCCAGCGCACTTGCCACATATA..................................................................................................................2680.13101000000000
.............................AACCAGTTGCGTGAGGGCCAGCGC................................................................................................................................2480.13101000000000
........................CATAGAACCAGTTGCGTGAGGG.......................................................................................................................................2280.13101000000000
...............................................CAGCGCACTTGCCACATATAGGGTCCT...........................................................................................................2780.13100001000000
........................................TGAGGGCCAGCGCACTTGCCACATA....................................................................................................................2580.13101000000000
........................................................TGCCACATATAGGGTCCTGGAGA......................................................................................................2380.13101000000000
..........................TAGAACCAGTTGCGTGAGGGCCAGCGCAC..............................................................................................................................2980.13100100000000
.....................CAGCATAGAACCAGTTGCGTG...........................................................................................................................................2180.13101000000000
......CGT---------GCACAGCATAGAACCAGTTGCG.............................................................................................................................................2580.13101000000000
..................................................CGCACTTGCCACATATAGGGTCCTGGA........................................................................................................2780.13101000000000
..CACTCGT---------GCACAGCATAGAACCAGTTGC..............................................................................................................................................2880.13101000000000
......................AGCATAGAACCAGTTGCGTGAGGGCC.....................................................................................................................................2680.13100100000000
........................................TGAGGGCCAGCGCACTTGCC.........................................................................................................................2080.13101000000000
......................................CGTGAGGGCCAGCGCACTTGCCACA......................................................................................................................2580.13101000000000
................................CAGTTGCGTGAGGGCCAGCGCAC..............................................................................................................................2380.13100100000000
................................CAGTTGCGTGAGGGCCAGCGCACTTGC..........................................................................................................................2780.13101000000000
.....................................................ACTTGCCACATATAGGGTCCTGGAG.......................................................................................................2580.13101000000000
ACCACTCGT---------GCACAGCATAGAACCAGC.................................................................................................................................................2780.13101000000000
.................................AGTTGCGTGAGGGCCAGCGCACT.............................................................................................................................2380.13101000000000
....................................................CACTTGCCACATATAGGGTCCTGGA........................................................................................................2580.13101000000000
..................GCACAGCATAGAACCAGTTGCGTGAG.........................................................................................................................................2680.13101000000000
....................................................................................................................................TTTTCTGCGACGAGCGCGTTCTATGG.......................2680.13101000000000
......................AGCATAGAACCAGTTGCGTGAGGGC......................................................................................................................................2580.13101000000000
........................CATAGAACCAGTTGCGTGAGGGC......................................................................................................................................2380.13101000000000
ACCACTCGT---------GCACAGCATAGAACCAG..................................................................................................................................................2680.13101000000000
.....................................................ACTTGCCACATATAGGGTCCTGGAGA......................................................................................................2680.13101000000000
......................................................................................................................................................TTCTATGGTGACTCTGTGTCTACC.......2480.13101000000000
...............................................................................................GTCCAAAGATGTGGCATCCCATA...............................................................2380.13101000000000
.............................AACCAGTTGCGTGAGGGCCAGCGCACT.............................................................................................................................2780.13101000000000
........................................................................................................................................CTGCGACGAGCGCGTTCTATGGTGAC...................2680.13101000000000
......................AGCATAGAACCAGTTGCGTGAGG........................................................................................................................................2380.13100000010000
...............................................CAGCGCACTTGCCACATATAGGG...............................................................................................................2380.13101000000000
...............................CCAGTTGCGTGAGGGCCAGCGCACT.............................................................................................................................2580.13100000010000
....................................TGCGTGAGGGCCAGCGCACTTGC..........................................................................................................................2380.13101000000000
................................................................................................TCCAAAGATGTGGCATCCCA.................................................................2080.13101000000000
....................................TGCGTGAGGGCCAGCGCACTTGCCT........................................................................................................................2580.13101000000000
.................................................GCGCACTTGCCACATATAGGGTCCTGG.........................................................................................................2780.13101000000000
........T---------GCACAGCATAGAACCAGT.................................................................................................................................................1980.13101000000000
..............................................CCAGCGCACTTGCCACATATAGGGTCCT...........................................................................................................2880.13101000000000
..............................ACCAGTTGCGTGAGGGCCAGCGCACT.............................................................................................................................2680.13101000000000
............................GAACCAGTTGCGTGAGGGCCAGCG.................................................................................................................................2480.13101000000000
........T---------GCACAGCATAGAACCAGTTGCG.............................................................................................................................................2380.13101000000000
............................GAACCAGTTGCGTGAGGGCCAGCGCACT.............................................................................................................................2880.13100000010000
....................................................CACTTGCCACATATAGGGTCCTGG.........................................................................................................2480.13101000000000
..............................................................................................................................CACTTCTTTTCTGCGACGAGCGCGT..............................2580.13101000000000
.....TCGT---------GCACAGCATAGAACCAGTTGC..............................................................................................................................................2580.13101000000000
..........................................................CCACATATAGGGTCCTGGAGACAATAGT...............................................................................................2890.11101000000000
.........................................................................................................................................................TATGGTGACTCTGTGTCTACCGAGT...2590.11100010000000
........................................................................................TTGGAGTGTCCAAAGATGTGGCAT.....................................................................2490.11101000000000
.............................................................CATATAGGGTCCTGGAGACAATAGT...............................................................................................2590.11100010000000
...............................................................TATAGGGTCCTGGAGACAATAGTT..............................................................................................2490.11100000010000
droEre2
GTCACTCGT---------GCATAGCGTAGAGCCAGTTGCGTGGGGCCCAGCACACTTGCCACAGATTGGATCCTGGAGACAATAGTTTTTGGAGTGCCCAAAAATGTGGCATCTCAGACATTGGAGGACTTCTTTCCTGCGACGAGCACGTTCTATGGTGACTCTGTGTCTTCCAAGTTGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................TCAGACATTGGAGGACTTCTTTCCTGC.........................................2711.0011000000
........................................................................................TTGGAGTGCCCAAAAATGTGGCATC....................................................................2530.3311000000
....................................TGCGTGGGGCCCAGCACACTTGCCAC.......................................................................................................................2630.3311000000

Generated: 05/15/2015 at 03:15 PM